HHsearch results for GI: 254780573 and protein with PDBid: 1nzj_A
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A*
Probab=99.58 E-value=1.7e-13 Score=115.21 Aligned_cols=240 Identities=20% Similarity=0.194 Sum_probs=145.9
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 16788884441112799999999999997079984579960552338889999870898644884899999999999998
Q gi|254780573|r 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110 (461)
Q Consensus 31 CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d 110 (461)
.-|++-++.||||+|+++.--++.|- .|+ +++..|.|+|-+ |++. .|++..++|
T Consensus 10 fAPsPtG~lHlG~artal~n~l~Ar~---~~G----~~iLRieDtD~~---R~~~----------------~~~~~I~~d 63 (298)
T 1nzj_A 10 FAPSPSGELHFGSLIAALGSYLQARA---RQG----RWLVRIEDIDPP---REVP----------------GAAETILRQ 63 (298)
T ss_dssp ECCCTTSCCCHHHHHHHHHHHHHHHH---TTC----EEEEEECCSCGG---GSCT----------------THHHHHHHH
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCCC---CCCH----------------HHHHHHHHH
T ss_conf 79598985208999999999999998---099----899986879977---5876----------------899999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-EEECCHHCCC-C-CCCCCCCHHHHHHHHHC--C-----
Q ss_conf 77626854100012356777789999987411432012892-8752200245-4-32246754666643210--2-----
Q gi|254780573|r 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPN-Y-GSFSRRKIDEQKMGTRV--P----- 180 (461)
Q Consensus 111 ~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~-VyFdv~~~~~-Y-G~Ls~~~~~~~~~g~r~--~----- 180 (461)
+..|++..+....+.|++++.+.+++++|+++|+||.-.-+ -. +.+... | |.-.......-....|. .
T Consensus 64 L~wLgl~~d~~~~~QS~r~~~y~~~~~~L~~~G~aY~C~csr~~--l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 141 (298)
T 1nzj_A 64 LEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRAR--IQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQ 141 (298)
T ss_dssp HHHTTCCCSSCCEEGGGCHHHHHHHHHHHHHTTCEEEECCCHHH--HHHTTSSCCCTTTTTCCCSTTCEEEECCSSCCCE
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHH--HHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCEE
T ss_conf 87446667764332676899999999999977982250255888--8763023333332233455322210205786216
Q ss_pred ---------CCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf ---------22210123512666337766631414677667643320477778752984148741356666875136688
Q gi|254780573|r 181 ---------EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251 (461)
Q Consensus 181 ---------~~~~K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHENEiAQ 251 (461)
....+..+.||+++ +..|.|.+|+ |+++-....|-+.-|. |.| |.+|.-.|
T Consensus 142 ~~~~~~~~~~~~~~~~~~d~vi~-------------r~Dg~ptY~l-A~vVDD~~~gIThViR--G~D----l~~st~~Q 201 (298)
T 1nzj_A 142 FTDQLRGIIHADEKLAREDFIIH-------------RRDGLFAYNL-AVVVDDHFQGVTEIVR--GAD----LIEPTVRQ 201 (298)
T ss_dssp EEETTTEEEECCHHHHHSCCEEE-------------CTTSCBCHHH-HHHHHHHHTTCCEEEE--EGG----GHHHHHHH
T ss_pred EEECCCCCEEECCCCCCCCEEEE-------------CCCCCCCEEE-CHHCCCCCCCCCEEEE--CCC----CCCCCHHH
T ss_conf 74422163663133344641246-------------5778631122-2011543269978964--886----66576889
Q ss_pred ---HHHHCCCCCCHHHEECCC-EEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH---CCCCCCCCCCCH
Q ss_conf ---886408753012100343-2576420223323321408998502533455777999999984---256643211450
Q gi|254780573|r 252 ---SCCADRIEKTANIWIHNG-FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML---MTHYREPIDFTV 324 (461)
Q Consensus 252 ---s~a~~~~~~~a~yWlH~G-~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lL---sshYRspLdfS~ 324 (461)
.+++.-..| + |.|.. .++.+|+||||+.|-. .++ +++.+.++--+|- .+..-..-+||.
T Consensus 202 ~~L~~aLg~~~P--~-y~H~pli~~~~G~KLSKr~~a~-----~i~------~~~~~~~~~~~L~~lG~~~~~~~~~~s~ 267 (298)
T 1nzj_A 202 ISLYQLFGWKVP--D-YIHLPLALNPQGAKLSKQNHAP-----ALP------KGDPRPVLIAALQFLGQQAEAHWQDFSV 267 (298)
T ss_dssp HHHHHHHTCCCC--E-EEEECBCCC------------------CCC------SSCCHHHHHHHHHHTTCCCCSCGGGSCH
T ss_pred HHHHHHHCCCCC--C-EEEEEEEECCCCCCCCCCCCHH-----HHH------CCCCCHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 999997389998--5-4986725778998567768711-----333------5893199999999808998622344899
Q ss_pred -HHHHHHHH
Q ss_conf -34687776
Q gi|254780573|r 325 -QRLTEAEI 332 (461)
Q Consensus 325 -e~L~~A~~ 332 (461)
+.|+++..
T Consensus 268 ~e~l~~~i~ 276 (298)
T 1nzj_A 268 EQILQSAVK 276 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999985