HHsearch results for GI: 254780573 and protein with PDBid: 3kfl_A
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=100.00 E-value=4.6e-43 Score=326.57 Aligned_cols=349 Identities=18% Similarity=0.148 Sum_probs=246.2
Q ss_pred EECCCCCEEEEEECCCCEEEEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCH---HHHHHH
Q ss_conf 9888982622330479847999616-788884441112799999999999997079984579960552338---889999
Q gi|254780573|r 8 YNTLERKITEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERA 83 (461)
Q Consensus 8 yntlt~~~~~f~p~~~~~v~~Y~CG-pTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidD---kii~~a 83 (461)
-+|+..+.-...-+.+.+.=.-++. |.|-+.+||||+|+|+.+|+++||+|..||+ |.|| |+.|| ||+.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~itt~~pY~nG~lHlGHa~~~~~~Di~~Ry~r~~G~~--V~~v---~G~D~hG~~i~~~A 83 (564)
T 3kfl_A 9 MGTLEAQTQGPGSMKKQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEE--VFVM---TGTDEHGQKVAEAA 83 (564)
T ss_dssp ---------------CCCCEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHTCC--EEEE---EEEECCSHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--EEEE---CCCCCCHHHHHHHH
T ss_conf 132134568997767799889948998888852356668899999999999936997--0340---83687619999999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHC--
Q ss_conf 8708986448848999999999999987762685410001235--677778999998741143201289287522002--
Q gi|254780573|r 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159 (461)
Q Consensus 84 ~~~~~~~~~~~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t--~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~-- 159 (461)
+++|++ +.+++++|.++|.++|++|||. .+.+.|.+ +|+....++..+|.++|+.|.....|+++...-
T Consensus 84 ~~~g~~------~~e~~~~~~~~~~~~~~~lgi~-~D~~~~T~~~~~~~~v~~~f~~l~~~g~i~~~~~~~~~~~~~~~~ 156 (564)
T 3kfl_A 84 AKQGVS------PMDFTTSVSSEFKQCFQEMNYD-MNYFIRTTNPTHEKLVQDIWKKLAAKGDIYLGKYEGWYSVSDESF 156 (564)
T ss_dssp HHTTCC------HHHHHHHHHHHHHHHHHHTTCC-CSEEEETTSHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTTTEE
T ss_pred HHCCCC------HHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCC
T ss_conf 985999------9999999999999999993981-787821598899999999999712152079603310111134220
Q ss_pred ----------CCCCCCCCC------------------CH----HHHH---HHHHCC----------CCCCCCCCCCEEEE
Q ss_conf ----------454322467------------------54----6666---432102----------22210123512666
Q gi|254780573|r 160 ----------PNYGSFSRR------------------KI----DEQK---MGTRVP----------EKYHKKNPADFILW 194 (461)
Q Consensus 160 ----------~~YG~Ls~~------------------~~----~~~~---~g~r~~----------~~~~K~~p~DFaLW 194 (461)
+.+|..... ++ +.+. ...... ...-++.+.|...+
T Consensus 157 l~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~ 236 (564)
T 3kfl_A 157 LTAQNVADGVDRDGKPCKVSLESGHVVTWVEEENYMFRLSAFRERLLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSIS 236 (564)
T ss_dssp ECGGGEEEEECTTSCEEEEETTTSCBCEEEEEEEEEECGGGGHHHHHHHHHHCTTSEESHHHHHHHHHHHHHCCCCEECE
T ss_pred CCHHHHCCCHHCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 32777522121013333212356875434145750100245699999999848775473788888888763001202566
Q ss_pred ECCCCCCCEEECCC-CCCCCCCCCHHHHHHHHHCC----------------------CCEEEEEECCCCCCCCCHHHHHH
Q ss_conf 33776663141467-76676433204777787529----------------------84148741356666875136688
Q gi|254780573|r 195 KRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLG----------------------KVFDIHGGGLDLIFPHHENEIAQ 251 (461)
Q Consensus 195 K~~~~~e~~w~spw-G~GRPGWHiECsam~~~~lg----------------------~~~DIH~GG~DL~FPHHENEiAQ 251 (461)
.. ....+.|..|+ |.++++||++|.||...+.+ .+.|||.+|.|++|.|...-.|+
T Consensus 237 ~~-~~~~~~WGipvP~~~~~~~~vw~da~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~p~~i~~~G~D~~~fh~~~~~~~ 315 (564)
T 3kfl_A 237 RK-RESVMNWSIPVPGDERHCIYVWLDALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKFHAIYWPAF 315 (564)
T ss_dssp EE-GGGGTTCSCEETTEEEEEECHHHHHHTHHHHHHHEEECTTSCEEECSSSTTTTCCSCSEEEEEGGGHHHHHTHHHHH
T ss_pred CC-CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 76-77889988757889985589961667677887653012356644440166625486402343666200114588888
Q ss_pred HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCHHHHHHH
Q ss_conf 88640875301210034325764202233233214089985025334557779999999842-56643211450346877
Q gi|254780573|r 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEA 330 (461)
Q Consensus 252 s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLs-shYRspLdfS~e~L~~A 330 (461)
+.+.. .++.++|+|+|+++++|+|||||+||+|.+.|++ +.|+++++||+|++ +.+....+|+++.+...
T Consensus 316 ~~~~~--~~~P~~~~~~~~l~~dg~KMSKS~GN~i~~~d~i-------~~ygaD~lR~~l~~~~~~~~d~~f~~~~~~~~ 386 (564)
T 3kfl_A 316 LMSAE--LPLPERLVSHGWWTKDHKKISKSLGNAFDPVEKA-------KEFGIDALKYFLMRESNFQDDGDYSDKNMVAR 386 (564)
T ss_dssp HHHTT--CCCCSCEEEECCEEETTEECCTTTTCCCCHHHHH-------HHHCHHHHHHHHHHHCCSSCCEECCHHHHHHH
T ss_pred HHHHC--CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH-------HCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 77622--5899611000343120343200258878855654-------31898999999996298666642016899999
Q ss_pred H--HHHHHCCCCC-------CC-------CC---CCCH-----------HHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 7--6432100001-------35-------10---0596-----------776302110127999999999999751306
Q gi|254780573|r 331 E--ILLSKWPQTS-------TS-------KG---IIDP-----------AVLSALYNDLNTVSAIQALHKLARESTKNH 379 (461)
Q Consensus 331 ~--~~l~kl~~~~-------~~-------~~---~~~~-----------~f~~AL~DDLNTp~ALa~L~~lvk~~n~~~ 379 (461)
. ...+++.++. .. .. ..+. .+.++| |++++..|+.+|+++++..|+-.
T Consensus 387 ~~~~~~~~l~n~~~r~~~~~~~~~~~~~~~~~~~~~d~~il~~~~~~~~~v~~~~-e~~~f~~a~~~i~~~~~~~N~yi 464 (564)
T 3kfl_A 387 LNGELADTLGNLVSRCVAPKINVNGMWPEPAEYSESDKTLIASLNNLAGTVDHYY-CLPDIQHALIAIFDVLRSLNAYV 464 (564)
T ss_dssp HHHTTTTTHHHHHHHHHCTTTSTTSBCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888887788999999987652168888512211578877888998999999999-86799999999999999999999