RPSBLAST alignment of GI: 254780573 and protein with PDBid: 1f7u
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation, ligase, ligase/RNA complex; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607
Score = 98.2 bits (244), Expect = 4e-21
Identities = 46/385 (11%), Positives = 97/385 (25%), Gaps = 61/385 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR--------QEHPSIP 91
H G+ R I+ L L G + V + + D + A + P
Sbjct: 159 HAGHLRSTIIGGFLANLYE-KLGWE-VIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDP 216
Query: 92 INDAISIITSKNTQ-----QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I+ + N + A + R + + + + +
Sbjct: 217 IHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEK 276
Query: 147 EANN--------EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ ++ S + + ID K E D + +
Sbjct: 277 YIDTYARLNIKYDVYSGESQVSKES--MLKAIDLFKEKGLTHED-KGAVLIDLTKFNKKL 333
Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
+S + + FD + H + +
Sbjct: 334 GKAIVQKSDGTTLYLTRDVGAAMDRYEKYH--FDKMIYVIASQQDLHAAQFFEILKQMGF 391
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP------------- 305
E A H F ++G MS G + ++ +LE K
Sbjct: 392 E-WAKDLQHVNFGMVQG--MSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEE 448
Query: 306 --------VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIID 348
+ + + +F +R+ E + Q + + GI
Sbjct: 449 VADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQ 508
Query: 349 PAVLSALYNDLNTVSAIQALHKLAR 373
++A ++ L +A + L +
Sbjct: 509 EKWINADFSLLKEPAAKLLIRLLGQ 533