RPSBLAST alignment of GI: 254780573 and protein with PDBid: 1li5

>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Length = 461
 Score =  422 bits (1087), Expect = e-119
 Identities = 177/482 (36%), Positives = 254/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVAMVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIF-DTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N  +  D  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEIAQSTCAHD-GQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI--------EVCK 398
           + +D NT  A   L  +ARE  +           +       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED          T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQ------GTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461