HHsearch alignment for GI: 254780575 and conserved domain: COG5070
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=98.15 E-value=0.00031 Score=39.98 Aligned_cols=199 Identities=11% Similarity=0.095 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------------CCCHHHHHHHHHHH
Q ss_conf 33458999999976999999997420235643799999999865655662368-------------85205779999986
Q gi|254780575|r 113 LTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWS 179 (316)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~ 179 (316)
T Consensus 90 qyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~-~Nclssa 168 (309)
T COG5070 90 QYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMF-TNCLSSA 168 (309)
T ss_pred EEEEEEHHHHHCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE-HHHHHHH
T ss_conf 564036887865661102575578874674023149999999999987400006677787504678538876-4467678
Q ss_pred -HHHHHHCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -53210001123444---225788999999877775310013456--567872566788653344211579999999862
Q gi|254780575|r 180 -AYCFARKTIPVGSS---EGFFIEMCVLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253 (316)
Q Consensus 180 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~t~i~~~~~~~a~~~ 253 (316)
T Consensus 169 afVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am-~ISgl~svgiSy~saWcvrV 247 (309)
T COG5070 169 AFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAM-FISGLCSVGISYCSAWCVRV 247 (309)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHH-HHHHHHHHHHHHCCCEEEEE
T ss_conf 99999987621345320268998616788899988877513783002128885789999-99888773144413136764
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 586999999999999999999999788899899999999999999999999999877556
Q gi|254780575|r 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313 (316)
Q Consensus 254 ~~a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~~iG~~lIi~gv~l~~~~~~~~~~k~~~ 313 (316)
T Consensus 248 tSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~~ 307 (309)
T COG5070 248 TSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQKD 307 (309)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 025389998886417487755520588604888999999998779999998888842778