RPSBLAST alignment for GI: 254780575 and conserved domain: TIGR00688

>gnl|CDD|129771 TIGR00688, rarD, rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains. Length = 256

 Score =  115 bits (290), Expect = 1e-26
 Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 7/257 (2%)

Query: 26  GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF---SGGLSLLK 82
           G +    A  L+G    Y++ L+ +   +++ HR++WS P +  ++  F   +  +  LK
Sbjct: 3   GIIVSLLASFLFGYMYYYSKLLKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK 62

Query: 83  DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
              K P  +  L+    ++  +W  FI+A+        S  Y + P++ V LG VFLKER
Sbjct: 63  RIQKRPLIL-SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKER 121

Query: 143 LNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
           ++  Q IA ++  L ++  + L   +P  +L +A +++AY   RK +      GF +E  
Sbjct: 122 ISRFQFIAVIIATLGVISNIVLKGSLPWEALVLAFSFTAYGLIRKALKNTDLAGFCLETL 181

Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
            L   A++Y++   F+  +       P  L L+  GL+       F     R  L+ +G+
Sbjct: 182 SLMPVAIYYLLQTDFATVQQ--TNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGL 239

Query: 262 MEYTAPLLMIVSSVFIL 278
           ++Y  P +M++   F++
Sbjct: 240 LQYIGPTIMMLCVSFLI 256