RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 48.9 bits (116), Expect = 4e-06
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 380 IAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQDIKKITKESLRQTIGIIPQ- 438
+ P + L+G +G GK+T K+L + G T+ G+ I + + Q +G PQ
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISD-VHQNMGYCPQF 2020
Query: 439 ---DTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFIMKLPNGYDTVVGERGLKLS 495
D +L Y LY E V ++S + L D + G S
Sbjct: 2021 DAIDDLLTGREHLY--LYARLRGVPAEEIEKVANWSIQSLGLSLYA--DRLAG----TYS 2072
Query: 496 GGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHI-QTALATLSKNRTTLVIAHRL 552
GG K+++S A A++ PP+++ DE T+ +D R + T ++ + + R ++ +H +
Sbjct: 2073 GGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSM 2130