RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 48.9 bits (116), Expect = 4e-06
 Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 14/178 (7%)

Query: 380  IAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQDIKKITKESLRQTIGIIPQ- 438
            + P +   L+G +G GK+T  K+L     +  G  T+ G+ I     + + Q +G  PQ 
Sbjct: 1962 VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISD-VHQNMGYCPQF 2020

Query: 439  ---DTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFIMKLPNGYDTVVGERGLKLS 495
               D +L      Y  LY        E    V    ++S  + L    D + G      S
Sbjct: 2021 DAIDDLLTGREHLY--LYARLRGVPAEEIEKVANWSIQSLGLSLYA--DRLAG----TYS 2072

Query: 496  GGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHI-QTALATLSKNRTTLVIAHRL 552
            GG K+++S A A++  PP+++ DE T+ +D    R +  T ++ + + R  ++ +H +
Sbjct: 2073 GGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSM 2130