RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
 Score =  274 bits (703), Expect = 4e-74
 Identities = 129/368 (35%), Positives = 207/368 (56%), Gaps = 2/368 (0%)

Query: 228 ETIQYFNSEKFEINRLEKYISKYKESAISVATSLGWLNFGQGLIFSIGMVITMIISSHAV 287
           ETI+   +E    NR ++ ++ Y  ++  V            LI  +   I +   +H V
Sbjct: 328 ETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLV 387

Query: 288 YIGEQTVGDFVFINTLLTQLAIPLNILGTIYRDSRQSFIEIEELLNILNEKIEIQNAVNS 347
             G  + G  V  N L  ++  P+  L  +++D +Q+ I +E L +ILN   E ++A   
Sbjct: 388 IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-GL 446

Query: 348 KDLKIKNGHIVFNNVSFSYNHHNC-IFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRL 406
             L    G I F N+ F Y   +  +   ++ +I P +   ++G SG GKST+ KLL RL
Sbjct: 447 AALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRL 506

Query: 407 YDIKGGIITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAA 466
           Y  + G + +DG D+       LR+ +G++ Q+ +LF+ ++R NI   NP A  + +  A
Sbjct: 507 YTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHA 566

Query: 467 VEVAQLKSFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDI 526
            ++A    FI +LP GY+T VGE+G  LSGG++QR++IARA++ NP I+IFDEATS+LD 
Sbjct: 567 AKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDY 626

Query: 527 ITERHIQTALATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIYT 586
            +E  I   +  + + RT ++IAHRLST+   D IIV ++G + ESG HE L++  G+Y 
Sbjct: 627 ESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGLYA 686

Query: 587 SMWKKQCE 594
            +W++Q  
Sbjct: 687 RLWQQQSG 694