RPSBLAST alignment for GI: 254780576 and conserved domain: cd03218
>gnl|CDD|72977 cd03218, ABC_YhbG, The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.. Length = 232
Score = 84.4 bits (209), Expect = 7e-17
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 361 NVSFSYNHHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQD 420
N+S Y + G+S + + L+G +G GK+T ++ L G I +DGQD
Sbjct: 5 NLSKRYGKR-KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQD 63
Query: 421 IKKIT-KESLRQTIGIIPQDTILFND-TLRYNILYGNPNASDQELCAAVEVAQLKSFIMK 478
I K+ + R IG +PQ+ +F T+ NIL + L +L+ + +
Sbjct: 64 ITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAV---LEIRGLSKKEREEKLEELLEE 120
Query: 479 LPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTALAT 538
+ + LSGGE++RV IARA+ NP ++ DE + +D I + IQ +
Sbjct: 121 F--HITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKI 178
Query: 539 LSKNRTTLVIA-HRLS-TITDADNIIVFDQGTVVESGSHENLIS 580
L ++I H + T++ D + +G V+ G+ E + +
Sbjct: 179 LKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222