RPSBLAST alignment for GI: 254780576 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 66.7 bits (163), Expect = 2e-11
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 372 IFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQDIKKITKESLRQ 431
K +SFE+ ++ LIG +G GKST+ +LL +Y G +T+ G+ L
Sbjct: 37 ALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV-----SSLLGL 91
Query: 432 TIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFIMKLPNGYDTVVGERG 491
G P+ T N L +L + D+++ +E ++L FI D V
Sbjct: 92 GGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFI-------DLPVKT-- 142
Query: 492 LKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTALATLSKNRTTLVIA-H 550
S G K R++ A A P I++ DE + D + Q L L K T+++ H
Sbjct: 143 --YSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSH 200
Query: 551 RLSTITD-ADNIIVFDQGTVVESG 573
S+I D +V ++G + G
Sbjct: 201 DPSSIKRLCDRALVLEKGKIRFDG 224