HHsearch alignment for GI: 254780577 and conserved domain: PRK10255
>PRK10255 N-acetyl glucosamine specific PTS system components IIABC; Provisional.
Probab=98.14 E-value=0.00014 Score=50.47 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=60.7
Q ss_pred CEEEEEECCEEEEEEECCCCCCCHHH--------C----CCC--------CCCEEEEEEEECCCCEEEEEEECC----CC
Q ss_conf 24897531545101314655565010--------1----200--------157068999970898299998515----76
Q gi|254780577|r 108 HVNRMPIGGEVIKSVHRNGQFMNAAL--------D----KAS--------EQNERQSLVLKTIHGNIGIVQIAG----FV 163 (232)
Q Consensus 108 H~~raP~~G~V~~~~~~~G~~~~a~~--------~----~~~--------~~NER~~~~~~~~~~~i~~~qiag----~~ 163 (232)
T Consensus 499 ~~~~aP~~G~vi~l~~V~D~vFa~~~mG~G~aI~P~~g~v~aP~dG~i~~vf~T~HA~gi~~~~G~EiLiHiGiDTV~L~ 578 (648)
T PRK10255 499 AELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALE 578 (648)
T ss_pred EEEECCCCCEEEECCCCCCHHHHHCCCCCCEEEECCCCEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCEEEC
T ss_conf 58975578528870108675553145578569945899598068857999716885799984898189999544524217
Q ss_pred CCEEEEECCCCCEEECCCEEEEEEE--------CCEEEEEECC--CC-EEEEECCCEEEEEEEEEEEEC
Q ss_conf 5503651389985703866888832--------8989999639--97-367622988993077879717
Q gi|254780577|r 164 ARRIVCWVKPTMKVEAGMRFGIIRF--------GSRVDLFLPK--DA-NIRVEIGQKTVAGETVIAEFN 221 (232)
Q Consensus 164 arrI~~~~~~g~~v~~G~r~G~irf--------GS~vdi~lP~--~~-~~~V~~Gq~V~aGeTila~l~ 221 (232)
T Consensus 579 G~gF~~~v~~Gd~Vk~G~~l~~~D~~~i~~~g~~~~tpviitN~~~~~~i~~~~~g~v~aGe~~i~~i~ 647 (648)
T PRK10255 579 GKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHVVAGQTPLYEIK 647 (648)
T ss_pred CCCCEEEECCCCEECCCCEEEEECHHHHHHCCCCCCCEEEEECCHHCCCEEECCCCCEECCCCEEEEEE
T ss_conf 805348834859967999889974999985099986379996541305248705784751883079971