HHsearch alignment for GI: 254780579 and conserved domain: COG2949
>COG2949 SanA Uncharacterized membrane protein [Function unknown].
Probab=99.60 E-value=1.2e-13 Score=103.44 Aligned_cols=144 Identities=20% Similarity=0.229 Sum_probs=115.0
Q ss_pred CCCCCCCCCEEEEECCC------------HHHHHHHHHHHHHCCCCCEECCCCCCC--CCHHHHHHHHHHHCCCCHHHEE
Q ss_conf 67654568789994698------------579999999999689982451587654--6789999987651588613322
Q gi|254780579|r 30 HIPDHPSVSAIVVLTGE------------PIRIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCID 95 (207)
Q Consensus 30 ~~~~~~~~DaIVVLgGg------------~~Ri~~a~~L~~~g~~~~ii~SG~~~~--~~~~~~~~~~~~~~~i~~~~I~ 95 (207)
T Consensus 50 ~~~~lP~r~vgvVLGtsky~~~g~~N~yy~~Ri~aA~~ly~~gKV~~LLlSGDN~~~sYnEp~tM~kdL~~~GVp~~~i~ 129 (235)
T COG2949 50 DIQDLPARQVGVVLGTSKYLAKGPPNRYYTYRIDAAIALYKAGKVNYLLLSGDNATVSYNEPRTMRKDLIAAGVPAKNIF 129 (235)
T ss_pred CHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHEE
T ss_conf 85458862048997223002479955768999999999986477049998168775346545899999998399888903
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 04666660256999999998649981898511442199999999862998799964167666754211698999999999
Q gi|254780579|r 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175 (207)
Q Consensus 96 ~e~~s~~T~ena~~~~~~l~~~~~~~iiLVTs~yHm~RA~~~f~~~~p~i~i~~~pv~~~~~~~~~Ww~~~~~~~~~~~E 175 (207)
T Consensus 130 lDyAGFrTLDSvvRA~kVF---~~~~ftIItQ~FHceRAlfiA~~~--gIdAic~~ap~p~~--------~~~~~vrlRE 196 (235)
T COG2949 130 LDYAGFRTLDSVVRARKVF---GTNDFTIITQRFHCERALFIARQM--GIDAICFAAPDPEG--------RSGLSVRLRE 196 (235)
T ss_pred ECCCCCCHHHHHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHHH--CCCEEEECCCCCCC--------CCCCEEHHHH
T ss_conf 2003741789899899870---767279982012348899999982--97547865899444--------6770207999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999987
Q gi|254780579|r 176 YLKILLLSIQL 186 (207)
Q Consensus 176 y~K~l~~~lr~ 186 (207)
T Consensus 197 ~~ARv~Av~D~ 207 (235)
T COG2949 197 FLARVKAVLDL 207 (235)
T ss_pred HHHHHHHHHHH
T ss_conf 99888787410