BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780579|ref|YP_003064992.1| hypothetical protein
CLIBASIA_02330 [Candidatus Liberibacter asiaticus str. psy62]
(207 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780579|ref|YP_003064992.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040256|gb|ACT57052.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ
Sbjct: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH
Sbjct: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL
Sbjct: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
LLSIQLSLSTQTASQFFITLIEEITVK
Sbjct: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
>gi|315121772|ref|YP_004062261.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495174|gb|ADR51773.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 188
Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 160/186 (86%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRY WY L CLIFFI GF+ FI+Y+ Q+ IP +PS++AIVVLTGEP RIE+AFELLEN+
Sbjct: 1 MRYLWYSLAACLIFFIGGFVLFIQYIVQIPIPANPSINAIVVLTGEPNRIEKAFELLENK 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IG+++FISGVHHSVSKDILLQKIPIR+DLAECC+DIGYKALNT GNA+EA W K+++H
Sbjct: 61 IGQRVFISGVHHSVSKDILLQKIPIRKDLAECCVDIGYKALNTAGNAKEALEWIRKHDYH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLI+THDYH+PR LEL R NS +F+PYPII+HDL++N+ I +K+LR+ IEYLKIL
Sbjct: 121 HVLIITHDYHIPRILLELNRKNSMTKFVPYPIITHDLQKNTLILYMKMLRMTFIEYLKIL 180
Query: 181 LLSIQL 186
LLS+Q+
Sbjct: 181 LLSLQI 186
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 14 WGGFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 74 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY+K+LL
Sbjct: 134 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYVKVLLA 193
Query: 183 SIQ 185
+
Sbjct: 194 GAR 196
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R +G F CL+ + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 RLLRWGGFACLLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQ 91
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGVH + + + + DL CC+DIGY A++T GNA+EAS W
Sbjct: 92 KGAGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHTKG 151
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K
Sbjct: 152 YRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVK 211
Query: 179 ILLLSIQ 185
+LL +
Sbjct: 212 VLLTGAR 218
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIG+ A++T GNA+E S W +
Sbjct: 92 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPRT EL ++ ++FIPYP+++ DL+ + +RV+L EYLK+L
Sbjct: 152 SVLVVTNNYHMPRTLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYLKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LAGAR 216
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 118/184 (64%), Gaps = 3/184 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LFV L+ F++GF++F V M P D P+ AI+VLTG RI+ A LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPA-DAIIVLTGGQSRIQAAVNLLKDKRGKRL 163
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S ++ +L + Q L +CC+D+ ALNT GNA E+ W NN+ V++V
Sbjct: 164 LISGVHPSTNEKVLQRATHADQSLFDCCVDLDRSALNTIGNAAESERWIRTNNYRRVILV 223
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ + V+F+PYP+++ + E+S + + LRVL IEY+K L ++
Sbjct: 224 TNNYHIPRSTLEMSYLMKDVEFVPYPVVNGERREHSWVAEGDTLRVLFIEYVKYLGAVVR 283
Query: 186 LSLS 189
+ S
Sbjct: 284 VGAS 287
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 103/181 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+RY Y + + + + GF+ F V M P P AIVVLTG RI++A +LL
Sbjct: 38 LRYGGYAILLLMACLVAGFLHFADDVTAMMPPAEPKADAIVVLTGGYQRIDQAVDLLRKG 97
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGVH S S + + DL CC+D+GY+A++T GNA E + W F
Sbjct: 98 SGRRLLISGVHPSTSPATIRKMTQASPDLFACCVDMGYRAIDTIGNANETAQWIHDKGFS 157
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT +YHM R+ +EL+R + QFIPYP+++ DL + LR L+ EY KIL
Sbjct: 158 SVLVVTSNYHMRRSLMELRRTDHETQFIPYPVVTADLRTRAWYADPNALRTLMSEYAKIL 217
Query: 181 L 181
+
Sbjct: 218 I 218
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LFV L+ F++GF++F V M P D P+ AI+VLTG RI+ A +LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPA-DAIIVLTGGQSRIQAAVDLLKDKRGKRL 163
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + ++ L + Q L +CC+D+ ALNT GNA E+ W NN+ V++V
Sbjct: 164 LISGVHPATNEKALQRATHADQSLFDCCVDLDRSALNTIGNATESERWIRTNNYRRVILV 223
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ D E+S + + LRVL IEY+K L +++
Sbjct: 224 TNNYHIPRSTLEMSYRMKDVEFIPYPVVNGDRREHSWVSEGDTLRVLFIEYVKYLGAAVR 283
Query: 186 LS----LSTQT 192
+ TQT
Sbjct: 284 VGTTELFGTQT 294
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 96 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R +G F CL+ + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 30 RLLRWGGFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGGYQRIDQAVELLQ 89
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISG H + + + + DL CC+DIGY A++T GNA+EAS W
Sbjct: 90 KGAGKRLLISGAHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHAKG 149
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K
Sbjct: 150 YRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVK 209
Query: 179 ILLLSIQ 185
+LL +
Sbjct: 210 VLLTGAR 216
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ +G
Sbjct: 34 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGVG 93
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 94 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 153
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 154 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 213
Query: 183 SIQ 185
+
Sbjct: 214 GAR 216
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 7 GLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
G FV L F F+ GF+ F V + P P AIVVLTG RIE+A ELL++ G
Sbjct: 38 GFFVLLAFLAVFVAGFLYFADTVASLQPPAAPKADAIVVLTGGFQRIEQAVELLKSGAGN 97
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGV+ + + + + DL +CC+DIG++A++T GNA EA W + + VL
Sbjct: 98 RLLISGVNPATTGSQIRRNTQSSADLFKCCVDIGHEAVDTIGNATEAGQWIHDHGYRSVL 157
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+VT++YHMPR+ LEL+R+ +FI YP+++ DL+ ++ + + ++ +L+EY K
Sbjct: 158 VVTNNYHMPRSLLELRRVRPDTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAK 212
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 96 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 7 GLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
G FV L F FI GF+ F V + P P AIVVLTG RI++A +LL+ G+
Sbjct: 28 GFFVLLAFLTVFIAGFLQFADTVASLQPPATPKADAIVVLTGGFQRIDQAVDLLKLGAGK 87
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH S ++ + + DL +CC+DIG+ A++T GNA E S W + +L
Sbjct: 88 RLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGHAAIDTIGNATETSLWIRNRGYRTIL 147
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+VT++YHMPR+ LEL+R +FI YP+++ DL+ + + +L+ +L+EY K
Sbjct: 148 VVTNNYHMPRSLLELRRARPETEFIAYPVVNSDLKTTNWLRNPLVLKAILLEYGK 202
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R G + + F ++GF F + ++ P V AIVVLTG RIE+A LLE+
Sbjct: 9 LRILTIGAILGVTFVVIGFFRFTDEIAELKAPGTSVDVDAIVVLTGGYQRIEQALALLED 68
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
IG+++ ISGV+ S S L + + +CC+DIGY+AL+T GNA E + W +NN+
Sbjct: 69 GIGDRLLISGVNPSTSSAALRRATGTQSATFDCCVDIGYQALDTIGNANETADWIRQNNY 128
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
VL+VT++YHMPR+ +EL + + V F+ YP+ DL+ + + LR L EY K
Sbjct: 129 VRVLVVTNNYHMPRSLMELSQASPDVSFVAYPVTHADLKTEAWLTDPVALRTLFTEYAKY 188
Query: 180 LLLSIQLSLSTQTAS 194
L ++ TA+
Sbjct: 189 SLARLRNWSGATTAT 203
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 112/185 (60%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRSFFVLLAFLAVFIAGFLQFADTVASLQPPPTPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG +A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGREAVDTIGNATETSHWIRSRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +F+ YP+++ DL+ + + +L+ +L+EY+K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYVKYS 204
Query: 181 LLSIQ 185
+ S++
Sbjct: 205 VSSLR 209
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF+ F V + P P AIVVLTG RI++A ELL+ G+++ ISGVH + +
Sbjct: 4 GFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAGKRLLISGVHPTTTPA 63
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ + DL CC+DIG+ A++T GNA+E S W + VL+VT++YHMPR+ E
Sbjct: 64 QIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAE 123
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
L ++ ++FIPYP+++ DL+ + +RV+L EY K+LL +
Sbjct: 124 LSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLTGAR 171
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 103 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 161
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 162 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 221
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 222 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 281
Query: 186 LSLST 190
L ++
Sbjct: 282 LGSAS 286
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 115
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 116 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 175
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 176 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 235
Query: 186 LSLST 190
L ++
Sbjct: 236 LGSAS 240
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 11 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 69
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 70 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 129
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 130 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 189
Query: 186 LSLST 190
L ++
Sbjct: 190 LGSAS 194
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
L ++
Sbjct: 194 LGSAS 198
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
L ++
Sbjct: 194 LGSAS 198
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKERRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 5 WYGL-FVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W G FV L+ + G F+ F + + P P AI+VLTG RI++A ELL G
Sbjct: 37 WGGFAFVFLVAIVFGGFLHFADSITTLKPPLEPKADAIIVLTGGYQRIDQAVELLRTGAG 96
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISG H + + + + +L CC+DIGY A++T GNA+EA+ W + +
Sbjct: 97 NRLLISGAHPTTTPSQIRKLTQSPANLFNCCVDIGYDAIDTIGNAREAAKWIHARGYKSI 156
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL+ ++ FIPYP+++ DL+ + LR ++ EY K+LL
Sbjct: 157 LVVTNNYHMPRSLAELKYVDPATDFIPYPVVNSDLKTKNWFTDPNALRTMIYEYAKVLLA 216
Query: 183 SIQ 185
+
Sbjct: 217 GAR 219
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
+ ++
Sbjct: 232 VGSAS 236
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GF F V + P +P AI+VLTG R++ A +LL + GE++
Sbjct: 42 LLILAVLFAGGFGWFANKVAHLTTPANPEKADAIIVLTGGQSRLDAAMDLLASGKGERLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + + V++VT
Sbjct: 102 ISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAYGTVILVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K LL
Sbjct: 162 NNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKYLL 216
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 115
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++V
Sbjct: 116 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVV 175
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 176 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 235
Query: 186 LSLST 190
L ++
Sbjct: 236 LGSAS 240
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 72 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 130
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++V
Sbjct: 131 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVV 190
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 191 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 250
Query: 186 LSLST 190
L ++
Sbjct: 251 LGSAS 255
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
+ ++
Sbjct: 194 VGSAS 198
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 1/182 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLEN 59
+R + + F GF F V + P +P+ AI+VLTG R++ A +LL +
Sbjct: 35 LRLSALSVLILATLFAGGFGWFANKVSHLTTPANPARADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYNKY 214
Query: 180 LL 181
LL
Sbjct: 215 LL 216
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Query: 8 LFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
+ VC+I F GF+ F V M P+ AI+VLTG RIE+A LL + +G++
Sbjct: 35 ILVCVIALGAFSGGFLWFADSVASMRPPEGARGDAIIVLTGGYQRIEQAVGLLRDGVGKR 94
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W +N+ +++
Sbjct: 95 LLISGVNPATTRSQIRKMTQGSSDMFTCCVDMGYKAIDTIGNANEAASWIRDHNYSSIVV 154
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT++YHM R+ EL+ + +FI YP+IS DL + + ++R LL EYLK +
Sbjct: 155 VTNNYHMHRSLHELRNASPQTEFIAYPVISADLVRTNWFVEPDVVRTLLYEYLKFV 210
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V F GF F V + P +P+ AI+VLTG R++ A ELL + GE++
Sbjct: 42 LLVLATLFAGGFGWFANKVSHLTTPANPTKADAIIVLTGGQSRLDAAMELLASGKGERLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S S+ L + L CC+DI AL+T GNA++++ W + + V++VT
Sbjct: 102 ISGVHPSASRRQLQAATGGDKKLFSCCVDIDRAALDTIGNAEQSAKWVTNHAYGTVILVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K LL
Sbjct: 162 NNYHMPRSLLEMGRLLHGARLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKYLL 216
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 104/174 (59%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ L F GF+ F V M P+ AI+VLTG RIE+A LL + +G+++ ISG
Sbjct: 40 ITLGAFSGGFLWFADSVASMRPPEGAKGDAIIVLTGGYQRIEQAVGLLRDGVGKRLLISG 99
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V+ + ++ + + D+ CC+D+GYKA++T GNA EA++W + + +++VT++Y
Sbjct: 100 VNPATTRTQIRKMTQGSSDMFSCCVDMGYKAIDTIGNANEAASWIRDHGYSSIVVVTNNY 159
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
HM R+ EL + QFI YP+IS DL + + ++R +L EY+K ++ +
Sbjct: 160 HMHRSLHELHNASPQTQFIAYPVISADLARTNWFAEPDVVRTMLYEYMKFVIAA 213
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + FF GF+ F +Q+ P+ P AI+VLTG RIE LL+ ++G ++
Sbjct: 51 LLMIVFFFCAGFVIFSEKTEQLKPPNPLPKADAIIVLTGGEKRIETGLNLLQQELGSRLL 110
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+++ V IVT
Sbjct: 111 ISGVNTTTNLKRFMYSTHITPQLFTCCVDIGHKAINTKGNAEESADWIKKHHYQTVYIVT 170
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYHM R+ EL+ + + FI YP+ ++E S+I +I +R+L+ +Y+K L + I+
Sbjct: 171 HDYHMWRSLRELKYLMPDINFIAYPVKKSEIE--STIQQINQIRILVFQYIKTLEVYIRT 228
Query: 187 SL 188
+
Sbjct: 229 AF 230
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 10 VCLIFFIMG-FI--SFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+CL+ + G FI SF+RY + + + P AIVVLTG RIERA LL+N G
Sbjct: 33 LCLVVLVAGGFIVGSFLRYAETTAAVSRLENVPPADAIVVLTGGANRIERAISLLKNGYG 92
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGV+ + S + + DL ECC+DI AL+T GNA EA WA +N F +
Sbjct: 93 KRLLISGVNENTSARAIARATNTDLDLFECCVDIDVAALDTVGNAMEAVRWAAENGFDEL 152
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT DYHM R+ +E R+ + P + +L ++ +I + L VL++EY K++
Sbjct: 153 ILVTSDYHMQRSLIEFDRVGDLDRITPVAVRLDELWQDDTIPTRRGLEVLVMEYAKLMAA 212
Query: 183 SIQLSL 188
++ ++
Sbjct: 213 RVRAAI 218
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 32 PDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL 89
P HP V AI+VLTG RIE +LLE G ++ ISGV + + L++ + I L
Sbjct: 66 PPHPLQKVDAIIVLTGGKNRIETGLKLLEKGFGSRLLISGVSTTTHPNKLIRMMNINPQL 125
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
CCIDIGY+A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE Q + + FI
Sbjct: 126 FSCCIDIGYQAINTQGNAKESADWIKKHRYKTLYIVTHDYHMMRSLLEFQYLMPNINFIA 185
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
YP I D+ + S I + +R+L++EY+K + + I+++LS+
Sbjct: 186 YP-IKQDVAD-SWIKEANQIRLLVLEYIKNICVKIRMTLSS 224
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 10/186 (5%)
Query: 2 RYFWYG-------LFVCLIFFIMGFISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIER 52
R W G +F+ + ++ GF F +V ++ P +P+ IVVLTG RI+
Sbjct: 5 RRMWVGVRSAAATIFLFFVLYVAGFGIFADHVVRLRAPAELNPA-DGIVVLTGGQSRIDT 63
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+LL+ +++ ISGV+ D L + L CC+DI ALNT GNAQE++
Sbjct: 64 GMDLLKAGKAKRLLISGVNPVARVDDLRLATGGDRALFNCCVDIDRAALNTVGNAQESAK 123
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
W N + +++VT++YHMPR+ LE++RI PYP+++ L++ + I LRVL
Sbjct: 124 WVSANTYGSIIVVTNNYHMPRSLLEMRRILPNADLQPYPVVNTPLDDGAWISNPDALRVL 183
Query: 173 LIEYLK 178
LIEY K
Sbjct: 184 LIEYTK 189
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W NN+H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANNYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 42 LVVIVFIFWGGFIIFSEKTERLVPPTPLPKADAIIVLTGGEHRIETGLHLLQKGLGSRLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ S + + + I L CCIDIG++A+NT GNAQE++AW +K+++ + IVT
Sbjct: 102 ISGVNTSTNLKSFMHNMHISPQLISCCIDIGHQAINTRGNAQESAAWIKKHHYKTLYIVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYH+ R+ EL+ + + FI YP+ E S+I +IK R+L+ +Y+K L + I+
Sbjct: 162 HDYHIWRSMRELKYLMPDIHFIAYPVKKSKAE--STIQQIKQARILIFQYIKTLQVYIRT 219
Query: 187 SL 188
+
Sbjct: 220 AF 221
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 10 VCLIFFIMGFI-------SFIRYVKQMHIPDHPS----VSAIVVLTGEPIRIERAFELLE 58
+CL ++G + F+R+ +++ + P+ IVVLTG +RI++A +LL+
Sbjct: 38 LCLAAVLVGVLLGGYLAGGFVRFAEEVSLLAKPAPIGAADGIVVLTGGALRIDQAIDLLK 97
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G ++ ISGV+ S L + +DL CC+D+ Y ALNT GNA+ A WA +
Sbjct: 98 EGRGRRLLISGVNPGTSAATLARMTDTDRDLFACCVDLDYAALNTVGNAEIARNWAREQG 157
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
F +++VT DYHMPR+ E RI PY + DL + LRVLL EY K
Sbjct: 158 FRDLILVTSDYHMPRSLREFDRIGELRSVTPYAVRRDDLWSAELMPNTAGLRVLLTEYAK 217
Query: 179 ILLLSIQL 186
++ ++L
Sbjct: 218 LIAARVRL 225
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 15/198 (7%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK---QMHIPDHPSVSAIVVLTGEPIRIERAFELL 57
+R+F+ +C + F GF+ F+ ++ Q +P H IVVLTG RI ++ +LL
Sbjct: 41 VRFFFLLFLICSVAFAAGFLWFVEVLQPAVQAVVPKH--ADGIVVLTGGRDRISQSLDLL 98
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E +++ ISGVH S S + + R L +CC+D+ KALNT GNA+E ++W KN
Sbjct: 99 ETGSAKRLLISGVHPSTSAKQIARLNSKRMWLFDCCVDLDRKALNTIGNAEETASWVRKN 158
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE-----ENSSIFKIKILRVL 172
F+ +L+VT YHMPR ELQ P P+ +L+ E+SSI K+ L
Sbjct: 159 QFNSLLVVTSAYHMPRALAELQVRLPEADLYPSPVYHKELDLEHWYESSSITKL-----L 213
Query: 173 LIEYLKILLLSIQLSLST 190
L EY+K +L+ +++ L T
Sbjct: 214 LREYVKYILVRLRVELDT 231
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 6/191 (3%)
Query: 2 RYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
RYF + L + ++FF GF+ F +Q+ P P AI+VLTG RIE +LL
Sbjct: 42 RYFPPTAFFLLMIVLFFCAGFVVFSEKTEQLTPPSPLPKADAIIVLTGGENRIETGLDLL 101
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +G ++ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+
Sbjct: 102 QQGLGSRLLISGVNTTTTLKRFMHSTHITPQLFACCVDIGHKAINTKGNAEESAVWIKKH 161
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ V IVTHDYHM R+ EL+ + + FI YP+ E S + ++ +R+L +Y+
Sbjct: 162 HYKTVYIVTHDYHMWRSMRELKYLMPDINFIAYPVKKSGDE--SIVQQLNQIRILAFQYI 219
Query: 178 KILLLSIQLSL 188
K + + I+ +
Sbjct: 220 KTIDVYIRTAF 230
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 97/168 (57%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F++F + AIVVLTG P RI A LL + G ++ I+GV+ + S D
Sbjct: 84 FLAFTAQIAAREPAAVKPADAIVVLTGGPSRIVDAVGLLADGRGRRLLITGVNPTTSMDE 143
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P + L CCID+G+KALNT GNA EA+ WA + F +++VT +HMPR +EL
Sbjct: 144 MRRALPDGEHLLGCCIDLGHKALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMEL 203
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
R V+ + YP+++ + S L++L+ EYLK ++ ++++
Sbjct: 204 GRALPDVELVSYPVVTTRTQPESWWSDPGTLKLLVKEYLKFIMATVKI 251
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 17 MGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ F++F V+Q+ P HP V AI+VLTG RIE ELL+ ++G ++ ISGV+ ++
Sbjct: 53 LTFVAFTEKVEQL-TPPHPLPKVDAIIVLTGGKNRIETGLELLQKKLGSRLLISGVNTTI 111
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ L++++ I L CC+DI + A NT+GNA+E++ W K+ + + IVTHDYHM R+
Sbjct: 112 HPNKLIRRMNINPRLFACCVDIDHHATNTQGNAKESAHWINKHRYKTLYIVTHDYHMIRS 171
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
LE + + + FI YPI + + S I + +R+L +EY+K + + I++ LS+
Sbjct: 172 LLEFKYLMPNINFIAYPIKQNVTD--SWIKQANQIRLLALEYVKNISVKIRIILSS 225
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 50 LAIIVFIFWGGFIVFSEKTERLSPPKPLPKADAIIVLTGGENRIETGLHLLQKGLGSRLL 109
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CCIDIG++A+NT GNA+E++ W +K++F + IVT
Sbjct: 110 ISGVNTTTNLKGFMHNRHITPRLVSCCIDIGHQAINTRGNAKESATWIKKHHFKTLYIVT 169
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HDYHM R+ EL+ + + FI YP+ + E S+I +I +R+LL +Y+K L
Sbjct: 170 HDYHMWRSMRELKYLMPDIHFIAYPVKKSNAE--SAIQQINQIRILLFQYIKTL 221
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L +++ ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRVGSAS 163
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 100/169 (59%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F + V + P+ S IVVLTG RIERA LL+ + ++ ISGV+ + +
Sbjct: 20 FLLFAQSVVSIRAPEEASADGIVVLTGGQDRIERAVGLLQEERARRLLISGVYPATTDRQ 79
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
++++ L CC+D+ KALNT GNA E +AWA + F +L+VT YH+PR LEL
Sbjct: 80 IVERTSGDLPLFRCCVDLDRKALNTVGNAVETAAWARTHGFSSLLLVTSAYHLPRAALEL 139
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+ + ++ +PYP+ + DL +S + + +R+LL E++K L +++
Sbjct: 140 KAVMPELELVPYPVFAEDLMLSSWYRRPQTIRLLLREFVKYTLARLRIG 188
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 103/187 (55%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ F+ GF+ F + IVVLTG RI +LL + G+++ ISGV+
Sbjct: 45 LLFVGGFVVFTTAIAPREPAGLKPADGIVVLTGGASRIADGVQLLASGHGQRLLISGVNR 104
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+ S+D + + +P + L +CC+D+G++ALNT GNA EA+ W F +++VT +HMP
Sbjct: 105 ATSQDEIRRTLPDNEHLLDCCVDLGHRALNTFGNAIEAAEWTRAQGFRSLVVVTSAWHMP 164
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
R +EL R V+ + YP+++ ++ + +++LL EYLK ++ ++ +
Sbjct: 165 RALVELGRALPEVELVAYPVVTDRMQSGGWWTDPQTVKLLLKEYLKYMMAMAKIRPAQAV 224
Query: 193 ASQFFIT 199
A + ++
Sbjct: 225 APKATVS 231
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GN E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|218531041|ref|YP_002421857.1| hypothetical protein Mchl_3091 [Methylobacterium chloromethanicum
CM4]
gi|218523344|gb|ACK83929.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 234
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
V L+ GF++F+ V++ P V IV +TG R+ A +LL G ++ IS
Sbjct: 23 LVGLLALAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLIS 82
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +
Sbjct: 83 GVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSN 142
Query: 129 YHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YHMPRT +EL+ + IPYP++S L+ + + R+L EYLK L+ +
Sbjct: 143 YHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTR 202
Query: 188 LSTQTASQFFITLI 201
+ F LI
Sbjct: 203 FESDPEQSRFAVLI 216
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ ++ + + + IVVLTG R+ A ELL + G+++ I
Sbjct: 32 LALGFVATAAGFVAFLAQLRGAELKPNRTADGIVVLTGGSSRVSDAVELLASGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D +CC+D+ A+NT NA E WA + FH +++VT
Sbjct: 92 SGVHRTNGASDISRSVPDSKDWLDCCVDLDRSAVNTRSNAAETRRWAHERGFHSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ V+ IP+ +I + LR+LL EY K + + ++
Sbjct: 152 NYHMPRAIVEMSHAMPDVELIPFAVIGDKWRDEPWWTSGATLRLLLSEYAKYVAVEARVR 211
Query: 188 LS 189
L+
Sbjct: 212 LA 213
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 108/176 (61%), Gaps = 13/176 (7%)
Query: 11 CLI--FFIMG--FISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKI 65
CL+ F IMG F+ F V+Q++ P S AI+VLTG RIE LL+ +G ++
Sbjct: 17 CLLSLFLIMGTHFVIFSEKVEQLYPPVSLSKADAIIVLTGGERRIETGLRLLKQGLGSRL 76
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ + LL+ + I L ECC+D+GY+A NT+ NA+E++ W +K+++ + IV
Sbjct: 77 LISGVNATFHPKRLLRNMHIDPQLFECCVDLGYQATNTKSNAEESAVWIKKHHYKTLYIV 136
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL---RVLLIEYLK 178
THDYH+ R+ LEL+ + + FI YPI +EN + K+K L R+L EY+K
Sbjct: 137 THDYHIARSLLELRYLMPDINFIAYPI-----KENVTQNKVKQLNKIRMLASEYIK 187
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ ++ F++F ++ + P+ P AI+VLTG RI+ F+LL+ +G ++
Sbjct: 45 ALFITILLIGATFVTFSEKIEHLTPPNPLPQADAIIVLTGGENRIKTGFDLLQKGLGSRL 104
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + L+ I L +D GY+A NT+GNA+E++AW +++N+ V IV
Sbjct: 105 LISGVNSTIDLNKLIDATYINPHLLVSRVDFGYEATNTKGNAEESAAWIKQHNYKTVYIV 164
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS---IFKIKILRVLLIEYLK 178
THDYHM R+ LEL+ + + FI YPI +EN++ I +I +R+L+ EY+K
Sbjct: 165 THDYHMVRSLLELKYLMPHIDFIAYPI-----KENTTGSWIKQINQMRILVSEYIK 215
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 9 FVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ ++ ++G F SF V + P P AIVVLTG RI +A LLE E++ I
Sbjct: 60 FIVVVGLVVGSFASFAERVATIETPRDPRADAIVVLTGGKERISKAMRLLEEGRAERLLI 119
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH S + Q L CC+D+ ALNT GNA E ++W ++ F +L+VT
Sbjct: 120 SGVHPGSSARQIAQATSSDLPLFTCCVDLDRAALNTLGNATETASWVAEHEFETLLVVTS 179
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+PR LEL + +PYP+ S + + + L++L+ EY+K L ++++
Sbjct: 180 AYHLPRAELELAEVLPNAGLLPYPVFSSERDLTAWYSSFDTLKLLMREYVKYTLARLRIT 239
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 4/171 (2%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPI-RIERAFELLENQIGEKIFISGV 70
+ +++G +F V+ + D P+ IV LTG R+ A LLE GE++ ISGV
Sbjct: 12 LIWLVGLFAFADRVRNLTPADEPARADGIVALTGPSAERVNAAVRLLEQDKGERVLISGV 71
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ V + L + P L CC+D+G++A +T GNAQE +AWA N+ +++VT DYH
Sbjct: 72 NREVRRQELRELTPGSNRLFNCCVDLGFEAEDTGGNAQEIAAWAGSKNYTSLIVVTSDYH 131
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKIL 180
MPR+ LE++ ++ PY + + L +NS ++ + R + +EY+K L
Sbjct: 132 MPRSLLEIRSAAPGLELTPYAVSTPSL-DNSRWWRAAVTARRMTLEYMKYL 181
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q+ P P AI+VLTG RIE +LL+ ++G ++ ISGV+ + +
Sbjct: 60 FVAFTEKVGQLTPPQPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTTTHPN 119
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE
Sbjct: 120 RLIRIMNINPRLFSCCVDIDHQAVNTQGNAKESAHWIKKHRYKTLYIVTHDYHMIRSLLE 179
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V FI YP I ++ +N I + +R+L +EY+K + + I++ LS+
Sbjct: 180 FKYLMPDVNFIAYP-IKQNVADN-WIKQANQIRLLALEYIKSISVKIRIILSS 230
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 1 MRYFWYGL-FVCLIFFIMGFISFIRYVKQMHIPDHPS----VSAIVVLTGEPIRIERAFE 55
M+ W L +C + + I F Y ++ D P+ V AI+VLTG+ R+ E
Sbjct: 1 MKQSWLWLRGLCFVVVLASMIGFAAYAGKVTGYDLPATDNTVDAIIVLTGDAGRLSAGGE 60
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL++ + ISGVH SV+ + ++ + D CC+ +G +A +T GNA+EA+A+ +
Sbjct: 61 LLQDGRASHLMISGVHPSVTTADIRRQTGLGDDAFSCCVTLGREATDTVGNAREAAAYVQ 120
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N + ++IVT DYH+PR+ LE + V IPYP+ + ++ + LR+ L E
Sbjct: 121 ANGYDRLIIVTSDYHLPRSLLEFRSHMPGVDLIPYPVRTQAPWQD-----VGALRLWLQE 175
Query: 176 YLKILLLSIQLSLSTQT 192
Y K + ++ SL++QT
Sbjct: 176 YAKYTTVQLRHSLTSQT 192
>gi|240139618|ref|YP_002964094.1| hypothetical protein MexAM1_META1p3069 [Methylobacterium extorquens
AM1]
gi|240009591|gb|ACS40817.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 234
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D
Sbjct: 32 GFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRD 91
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +E
Sbjct: 92 EIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVE 151
Query: 138 LQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
L+ + IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 152 LRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSR 211
Query: 197 FITLI 201
F LI
Sbjct: 212 FAVLI 216
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHI---PDHPSVSAIVVLTG-EPIRIERAFELLENQIGEK 64
V ++ + G + F V + P+ P+ AIVVLTG +R++ LLE + GE+
Sbjct: 8 LVVVLLWAAGLLVFADRVIESTPAIEPEEPA-DAIVVLTGASDMRLKEGMRLLERRKGER 66
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+FISGV+ V + L+ + L ECC+D+GY+A NT NA+E + WA ++F +++
Sbjct: 67 LFISGVNRDVKRPELMDVTEGSKRLYECCVDLGYQAENTVQNAREIAEWARGHDFDTLIV 126
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT DYHMPR+ LEL+ FI YP+ + DL K R++++EY K L
Sbjct: 127 VTSDYHMPRSLLELKADMPDAHFISYPVPTADLSARDWWKSGKGARLIVLEYCKYL 182
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 12 LIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
L FFI +GF+ F+ ++ I IVVLTG R+ A ELL G ++ ISG
Sbjct: 15 LGFFIAAVGFVGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLISG 74
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + + +P + CC+D+ Y A+NT NA + WA + F +++VT +Y
Sbjct: 75 VHPTNDANDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLVVVTSNY 134
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR EL ++ IPY ++ + LR+LL EY K + +L L+
Sbjct: 135 HMPRAIAELSHAMPSMDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLRLA 194
>gi|163852283|ref|YP_001640326.1| hypothetical protein Mext_2865 [Methylobacterium extorquens PA1]
gi|163663888|gb|ABY31255.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 283
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D
Sbjct: 81 GFLAFVAVVERTDRPSLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRD 140
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +E
Sbjct: 141 EIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVE 200
Query: 138 LQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
L+ + IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 201 LRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSR 260
Query: 197 FITLI 201
F LI
Sbjct: 261 FAVLI 265
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 19 FISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
F++F V Q P HP AI+VLTG RIE +LL+ ++G ++ ISGV+
Sbjct: 62 FVAFTEKVGQF-TPPHPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTRTHP 120
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L++ + I L CC+DI ++A+NT GNA+E++ W +KN + + IVT DYHM R+ L
Sbjct: 121 NKLIRIMNINPRLFSCCVDIDHQAINTRGNAEESAHWIKKNRYKTLYIVTDDYHMTRSLL 180
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
E + + + FI YP I D+ + S I ++ +R+L +EY+K + + I++ L
Sbjct: 181 EFKYLMPDINFIAYP-IKQDVAD-SWIKQVNQIRLLALEYIKNISVKIRIIL 230
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G FV + GFI F+ ++ I IVVLTG R+ A ELL G ++
Sbjct: 16 GFFVAAV----GFIGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLL 71
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 72 ISGVHPTNEASDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLIVVT 131
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
+YHMPR +EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 132 SNYHMPRAIVELSHAMPSLDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARL 191
Query: 187 SLS 189
L+
Sbjct: 192 RLA 194
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEP-IRIERAFELLENQIGEKI 65
L V +++F+ G ++F V Q P VS +VVLTG +R+E A +LLE G+++
Sbjct: 8 LIVVMVWFV-GLLAFTSRVDQSTPALEPPVSDGVVVLTGASNVRLEVATKLLEAGKGKRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ S++ +L + + ECC+D+GY A +T GNA E + WA ++ +++V
Sbjct: 67 LISGVNREASREDVLGVTKAVRPIYECCVDLGYAAADTIGNASETAEWARAKDYRSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
T DYHMPR+ LEL V PYP+++ L + R + +EY K L +
Sbjct: 127 TADYHMPRSMLELHASMPGVTLHPYPVVTESLNAHRWWQGGTSARRMTVEYCKYLAI 183
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ I + IVVLTG R+ A ELL G ++ I
Sbjct: 31 LAIGFVGMASGFVVFLSQLRGAEIQPGRNADGIVVLTGGSSRVSDAIELLAAGYGRRLLI 90
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P Q L CC+D+ A+NT NA EA WA + FH +++VT
Sbjct: 91 SGVHPTNGANDISRSLPDSQQLLSCCVDLDRSAINTRSNAAEARRWAHERGFHSLIVVTS 150
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ ++ IP+ ++ ++ R+LL EY K + ++
Sbjct: 151 NYHMPRAIVEMSHAMPDIELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAAEARVR 210
Query: 188 LS 189
L+
Sbjct: 211 LA 212
>gi|306842871|ref|ZP_07475508.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
gi|306286958|gb|EFM58475.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
Length = 162
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 86/138 (62%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+ ALN
Sbjct: 1 MTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDRTALN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ + E S
Sbjct: 61 TVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSW 120
Query: 163 IFKIKILRVLLIEYLKIL 180
+ + LRVL EY+K L
Sbjct: 121 VAEGDTLRVLFTEYVKYL 138
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 10 VCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFI 67
V + ++ G F V+ PD AIV LTG R+ A LLE G+++ I
Sbjct: 9 VVALMWLTGLFVFAERVRGFTPAPDPARADAIVSLTGPSAERVNAAIRLLEQGKGDRLLI 68
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V + L P L CC+D+G++A NT GNAQE +AWA + +++VT
Sbjct: 69 SGVNREVRRQELRALTPGSSKLFNCCVDLGFEAENTVGNAQEIAAWARSKGYDDLIVVTS 128
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
DYHMPR+ LE++ V+ PY + + L+ + R + +EY+K L
Sbjct: 129 DYHMPRSLLEIRGAAPGVRLTPYAVSTPSLDNAGWWRATETARRMTLEYMKYL 181
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF+ F V + + IVVLTG +R+E +L+ +++ ISGV+ V
Sbjct: 20 VFGFVLFSVTVTRDDVGGWDKADGIVVLTGGDLRVEAGAKLMNEGRAKRLLISGVNRKVR 79
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++ + + + + CC+D+GY+AL+T GNA E WA N + ++IVT YHMPR+
Sbjct: 80 REEMQRLLGLDAKTFNCCVDLGYEALDTVGNADETRTWARNNGYTKLIIVTSRYHMPRSL 139
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
EL + V IPYP+ E + RVL+ EYLK L
Sbjct: 140 AELALVMPKVTLIPYPVTPRHFPETAWWLHSSTTRVLVSEYLKFL 184
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IGFVGAAVGFVGFLSQLRGVETKPASNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDNQRLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL + IP+ +I E LR+LL EY K L +++ L+
Sbjct: 154 HMPRAIVELSYAMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVRVRLA 213
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IAFVGAGVGFVGFLSQLRGVETKPVNNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQQLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAAEARVRLA 213
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A +LL G+++ ISG
Sbjct: 34 IAFVGAAVGFVGFLSQLRGVETKPAANADGIVVLTGGSSRISDAVDLLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W + F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQRLLTCCVDLDRSAVNTRSNASETRRWVDGQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPDVTLIPFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAAEARVRLA 213
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ F +GF++F+ + + H IV LTG RI A +LL G ++ I+GV+
Sbjct: 41 LAFGVGFLAFVGCLARTERQPHAPADGIVALTGGAQRIGDAIDLLAAGYGRRLLITGVNE 100
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
S++ + + P +Q L CC+D+ Y+A NT GNA E W +N F V +VT +YHMP
Sbjct: 101 RTSREEIARLNPGQQHLIACCVDLDYRARNTIGNAIETRRWMRENGFRTVAVVTSNYHMP 160
Query: 133 RTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
RT LEL + + +P+P++ + ++ R+L+ EY+K L+ I+ T
Sbjct: 161 RTLLELGHALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVSEYVKFLVAWIRTRFETD 220
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LF + F+ GF F ++ IVVLTG R+ A +LL G+++ I
Sbjct: 28 LFSFFVIFLAGFAWFASQLRSEESKPDRHADGIVVLTGGASRVADALDLLSKGYGKRLLI 87
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + +L+ P Q L +CC+D+ A+NT NA E W ++ FH +++VT
Sbjct: 88 SGVHPANGAADILRAQPESQALLKCCVDLDRSAVNTRSNATETRRWVKERGFHSLIVVTS 147
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +EL + I YP++S +R++ +EY+K L+ +++
Sbjct: 148 NYHMPRATVELTHAMPDIDLIFYPVVSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVRVR 207
Query: 188 LST 190
L+
Sbjct: 208 LAA 210
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
F+ G+++F + + A+V LTG R+ A + L +++ I+GV+ +
Sbjct: 32 FVAGYVAFALSLARQEPILKVEAEAVVALTGGSDRVLDAADFLARGQAKRMLITGVNRAT 91
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI-VTHDYHMPR 133
+L + +P+ +DL CC+D+GY+A++T GNA+E WA+ N LI VT +YHMPR
Sbjct: 92 RSSVLARILPVSRDLFNCCVDLGYQAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPR 151
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL--LLSIQLSL 188
+EL ++ P+P++S ++ + + R++ EY+K L LL +LSL
Sbjct: 152 ALVELSAALPDIKLYPFPVVSEHVDVADWATDLGVARLVGSEYVKFLGALLRTRLSL 208
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
V + F++G F+ ++ Q+ P H + IVVLTG R+ A ELL G+++
Sbjct: 45 VLALGFLVGAGGFVVFLSQLRGAEQKPRH-NADGIVVLTGGSSRVSDAVELLAAGYGKRL 103
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + + + +P +D CC+D+ A++T NA E W ++ F +++V
Sbjct: 104 LISGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVV 163
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR E+ V+ IP+ +I + LR+LL EY K L + ++
Sbjct: 164 TSNYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 223
Query: 186 LSLS 189
+ LS
Sbjct: 224 VRLS 227
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
I+F+ ++ I IVVLTG R+ A ELL G ++ ISGVH + + +
Sbjct: 37 IAFLSQLRGAEIAPDRKADGIVVLTGGSSRVSDAMELLAAGYGRRLLISGVHPTSTASDI 96
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +P Q CC+D+ AL+T GNA EA WA+ F +++VT +YHMPR +E
Sbjct: 97 SRTLPENQSFMTCCVDLDRTALSTRGNAAEARRWAQARRFKSLIVVTSNYHMPRALVEFS 156
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
IP+ ++ E LR+LL EY+K + +++ L F I
Sbjct: 157 HAMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEVRVRL-----EDFGID 211
Query: 200 LIEEIT 205
L E++
Sbjct: 212 LSPEVS 217
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
V + F++G F+ ++ Q+ P H + IVVLTG R+ A ELL G+++
Sbjct: 31 VLALGFLVGAGGFVVFLSQLRGAEQKPRH-NADGIVVLTGGSSRVSDAVELLAAGYGKRL 89
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + + + +P +D CC+D+ A++T NA E W ++ F +++V
Sbjct: 90 LISGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVV 149
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR E+ V+ IP+ +I + LR+LL EY K L + ++
Sbjct: 150 TSNYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
Query: 186 LSLS 189
+ LS
Sbjct: 210 VRLS 213
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF F+ +K IVVLTG RI A LL G ++ I+GVH +
Sbjct: 42 GFGLFVAGIKGREAQTARRADGIVVLTGGAERITDATNLLVEGRGTRLLITGVHPDTTLA 101
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ + +P ++ ECC+++G ALNT GNA E + WA ++ F +L+VT +HMPR +E
Sbjct: 102 EIGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFRSLLVVTSAWHMPRALVE 161
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
L+R V+ +PYP++ EN + +R+L +EY+K
Sbjct: 162 LRRALPDVELVPYPVVPKRGPENWEA-SLANVRLLFVEYVK 201
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVK-QMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKI 65
L + L+ + +G ++F V P+ P +V LTG +R+E A LLE G+++
Sbjct: 7 LLIALMIWGLGLVAFTGRVDLSTPAPEPPEADGVVALTGASSLRLEAATRLLEEGKGKRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + + + +CC+D+G+ A NT GNA E + WA + +++V
Sbjct: 67 LISGVNRETTRADVQSVTKAVKPIYDCCVDLGFTAANTVGNALETAEWARSKGYKSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKIL 180
T DYHMPR+ LEL V+ PYP+ + DL + +K I R +++EY K L
Sbjct: 127 TADYHMPRSMLELSAAMPGVKLFPYPVKT-DLNAH-RWWKTSISARRMIVEYCKYL 180
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKI 65
L + L+ + +G ++F V Q P+ P +V LTG +R+E A LLE+ G+++
Sbjct: 7 LLIALMIWGLGLLAFTGRVDQSTPAPEPPISDGVVALTGASTLRLEAATRLLEDGKGQRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + + + +CC+D+G+ A NT GNA+E + WA + +++V
Sbjct: 67 LISGVNREATRAEIQAVTKAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
T DYHMPR+ LEL+ V PYP+ + DL R +++EY K L
Sbjct: 127 TADYHMPRSMLELRAAMPNVVLHPYPVKT-DLNARRWWKTGVSARRMIVEYCKYL 180
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ + + + IVVLTG R+ A ELL G ++ I
Sbjct: 32 LALGFVAVAGGFVAFLAQLHSAELQPRRNAEGIVVLTGGSSRVSDAVELLAAGYGRRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P D CC+D+ A++T NA E W + F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESSDWFSCCVDLDRSAVDTRSNAAETRRWVRERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSDAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LS 189
LS
Sbjct: 212 LS 213
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVH 71
+I F+ GF F + I IVVLTG R+ A +LL G+++ ISGVH
Sbjct: 32 VIIFLAGFAWFAGQLHSEEIKPERHADGIVVLTGGASRVADALDLLSRGYGKRLLISGVH 91
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ +L+ P R+ L CC+D+ A+NT NA E W ++ F +++VT +YHM
Sbjct: 92 PANGTADILRAQPERETLLSCCVDLDRSAVNTRSNATETRRWVKERGFRSLIVVTSNYHM 151
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
PR +EL + I YP++S +R++ +EY+K L +++ L+
Sbjct: 152 PRASVELSHAMPDIDLIFYPVVSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVRVRLAA 210
>gi|254562029|ref|YP_003069124.1| hypothetical protein METDI3633 [Methylobacterium extorquens DM4]
gi|254269307|emb|CAX25273.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 234
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D +++ P
Sbjct: 40 VERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRDEIVRLNPS 99
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INST 144
++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +EL+ +
Sbjct: 100 QEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDG 159
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ + + R+L EYLK L+ + + F LI
Sbjct: 160 ETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSRFAVLI 216
>gi|188582230|ref|YP_001925675.1| hypothetical protein Mpop_2985 [Methylobacterium populi BJ001]
gi|179345728|gb|ACB81140.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 234
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
V+Q P + IV +TG R+ A +LL G+++ ISGV+ ++D +++ P
Sbjct: 40 VEQAERPSLDGIDGIVAMTGGSQRVGDAIDLLAEGHGKRLLISGVNERTTRDEIVRLNPS 99
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INST 144
++ CC+D+ Y+A NT GNA E W ++ F + +VT YHMPRT +EL+ +
Sbjct: 100 QEHWITCCVDLDYRARNTIGNAIETRRWMRRHGFTAIAVVTSSYHMPRTLVELRHALRDG 159
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ ++R+L EYLK L+ + F LI
Sbjct: 160 ETLIPYPVVSDGLDLGRWWADPAVMRLLGAEYLKFLVAWGRTRFEADPEQSRFAVLI 216
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
++ GF F ++++ P IV LTG P RI A++LL+ G ++ I+GVH V
Sbjct: 30 YVAGFFLFTAELERIPPVRVPVADGIVALTGGPDRITAAYKLLQEGKGNRLLITGVHPDV 89
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S L + +P +CC+D+G+ A NT GNA E + W + N+ +++VT YH+PR
Sbjct: 90 SVASLKEMVPGGSAKFDCCVDLGHMAENTIGNATETAEWVRERNYRSIILVTSTYHLPRA 149
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
LEL R V+ +P+ L + R+L+ EY K LL
Sbjct: 150 RLELARAMPDVEISAFPVFQDTLHLDGWWAYPGTTRLLISEYTKYLL 196
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 8 LFVCLIFF-----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
L +CL F + GFI F +++ +VVLTG RI A ELL
Sbjct: 22 LLLCLAGFLASGFVAGFIGFALSLERAEPILTVQADGVVVLTGGSDRIHEAAELLARGQA 81
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ I+GV+ S + + +P+ + L +CCID+GY+AL+T GNA E WA+
Sbjct: 82 RRLLITGVNKSTRGPEIAKLLPVSRQLFDCCIDLGYEALDTAGNAAETREWAKARGIGGS 141
Query: 123 LI-VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
LI VT +YHMPR +EL V+ P+P++S ++ + + R++ EY+K L
Sbjct: 142 LIVVTSNYHMPRALVELSAALPGVELYPFPVVSEHMQVADWLDDASVARLIGGEYVKYL 200
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + + + IVVLTG RI A +LL G ++ I+GV+ S+D
Sbjct: 47 FLVFVGGLARTEQQPYARADGIVVLTGGAQRIGDAIDLLAAGFGRRLLITGVNERTSRDE 106
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + P +Q L CC+D+ Y+A NT GNA E W +N F + +VT +YHMPRT LEL
Sbjct: 107 IARLNPGQQHLISCCVDLDYRARNTIGNAIETRRWMRENGFRTIAVVTSNYHMPRTLLEL 166
Query: 139 QR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+ S + +P+P++ + ++ R+L EY+K L+
Sbjct: 167 DHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLASEYVKFLV 210
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R + + L+ G F F + V +P + AIVVLTG R+ A LLE
Sbjct: 49 LRVLFVAVVTALLAGTAGQFAMFAQKVANARVPATANADAIVVLTGGHARVNEAVRLLEE 108
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ ISGVH +++ L L +D+ ALNT GNA E + W KN F
Sbjct: 109 GRANRLLISGVHPGTTREQLAAVTASNMPLETNSVDLDRVALNTAGNAVETANWVRKNGF 168
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+L+VT YH+PR +EL V I YP+ S DL+ + + +R+L+ EY+K
Sbjct: 169 SSLLVVTSAYHLPRAKVELAGALPDVSLIAYPVFSKDLKLDHWYREPATMRLLMREYVKY 228
Query: 180 LLLSIQLSL 188
+L +++++
Sbjct: 229 ILARLRITV 237
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
F+ L F++GF F+R + AIVVLTG P R+ A LL++ G ++ IS
Sbjct: 14 FILLTAFVVGFALFVRQARTFTPDASVRGQAIVVLTGGPNRVSTAAALLQDGSGRRLLIS 73
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ + Q L ECC+D G +A +T GNA E +AWA ++ + +++VT D
Sbjct: 74 GVNPDSPPADIAAAAGASQALFECCVDFGLQAADTIGNAAETAAWARQHGYDRIIVVTSD 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
YHMPR LELQ V+ + Y + + R L+EY+K
Sbjct: 134 YHMPRALLELQAAMPDVRLVAYGVPAPAPWSGG-----HEARRWLVEYVK 178
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
Query: 40 IVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
IVVLTG +RI+ LLE + G ++ ISGV+ V ++ LL + L ECC+D+GY
Sbjct: 41 IVVLTGASDMRIKEGMRLLERRKGARMLISGVNREVKREELLPVTEGSKKLYECCVDLGY 100
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+A T GNA E + WA+ F +++VT DYH+PR+ LE++ V+ YP+ + L+
Sbjct: 101 EAQTTLGNAYEVAEWAKAKGFDDLIVVTSDYHVPRSLLEIKAALPGVKLHAYPVATPTLD 160
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+ RVL++EY K L + + S+ T+S
Sbjct: 161 AREWWKSWRSSRVLIVEYSKYLAILARDIFSSLTSS 196
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 2 RYFWYGLFVCLIFFIMGFISF---IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R F LF+ + + GF+ F + +Q+ P+ A+VVLTG RI +L+
Sbjct: 37 RLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGSARIAEGLDLIA 96
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGV+ S L L +CC+D+ AL+T GNA+E + W
Sbjct: 97 AGKGKRLLISGVNEDTSVAALKAINTNHAPLFDCCVDVERAALDTIGNARETAKWVADKG 156
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT YHMPR+ LE +R + P+ +I L + LR L++EY+K
Sbjct: 157 YSSLIVVTSSYHMPRSLLEFRRTMPKLNIKPHAVILEPLAREGWWKNPETLRFLVVEYVK 216
Query: 179 ILLLSIQLSLSTQTASQFFITLI 201
+ +++ L QT S +++
Sbjct: 217 YVGAAMREYLKPQTISALRGSML 239
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 22 FIRYVKQMHIPD-HPSVSA--IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F ++ Q+ + + PS +A IVVLTG R+ A +LL + G+++ ISGVH +
Sbjct: 42 FAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASE 101
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P +D CC+D+ A NT NA E WA + F +++VT +YHMPR E+
Sbjct: 102 ISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEM 161
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
++ IP+ +I + + LR+LL EY K + + ++ L+
Sbjct: 162 SHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLA 212
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G + ++ GF+ F+ + + IV LTG RI A +LL G ++
Sbjct: 44 GAGLGMLALFAGFLVFVSALARHERTPTDRADGIVALTGGAQRIGDAIDLLAGGYGRRLL 103
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
I+GV+ S+D + + P ++ L CC+D+ Y+A NT GNA E W + F V +VT
Sbjct: 104 ITGVNERTSRDEIARLNPTQRALIACCVDLDYRARNTIGNAIETRRWMRAHRFSTVAVVT 163
Query: 127 HDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+YHMPRT +EL + + + +P+P+++ + + R+L EY+K L+
Sbjct: 164 SNYHMPRTLVELDHALQDSDRVLPHPVVTEAFDADRWWQNPPAARLLASEYMKFLV 219
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 8 LFVCLIFFIMG----FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
L C+ F++G F +F V +P AIVVLTG R+ A LLE
Sbjct: 55 LVACVTVFVVGTTIQFANFANRVSTATVPVSTQADAIVVLTGGQERVSEAVRLLEEGHAG 114
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH ++ + + L E +++ ALNT GNA E + W KN F +L
Sbjct: 115 RLLISGVHPGTTRKQIAVVTASAKPLEEGSVELDRVALNTAGNATETANWVRKNGFDSLL 174
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YH+PR EL V I YP+ + DL+ + K +R+L+ EY+K +
Sbjct: 175 VVTSAYHLPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVAR 234
Query: 184 IQLSL 188
+++++
Sbjct: 235 LRIAV 239
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG RI A +LL G+++ ISGV+ +++ +++ P ++ CC+D+ Y+A N
Sbjct: 1 MTGGAQRIGDAIDLLAGGRGKRLLISGVNERTTREEIIRLNPAQEQWISCCVDLDYRARN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENS 161
T GNA E W ++ F V +VT YHMPRT +EL+ +N+ IPYP+++ LE
Sbjct: 61 TIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPVVTEGLEIER 120
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
R+L EYLK L+ ++ T F LI
Sbjct: 121 WWADPAATRLLGAEYLKFLVAWLRTRFETDPEQSRFAVLI 160
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ IVVLTG R+ A ELL + G+++ ISGVH + + + +P +CCID
Sbjct: 52 NADGIVVLTGGSSRVSDAIELLSSGYGKRLLISGVHRTNGVHDISRTVPDSHRWLDCCID 111
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ A+NT NA EA WA + F +++VT +YHMPR +E+ V+ IP+ ++
Sbjct: 112 LDRSAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRAIVEMSHAMPDVELIPFAVVGD 171
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ R+LL EY K L ++ L++
Sbjct: 172 KWRDEPWWSSGTTFRLLLSEYAKYLAAETRVRLAS 206
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGEPI--RIERAFELLENQIG 62
L + LI+F G ++ V+Q +P P IV LTG RI A LLE+ G
Sbjct: 8 LVLALIWF-AGLFAYAHRVQQSTPARLP--PPADGIVALTGAGSKERIAAAIGLLEDGYG 64
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ +SGV+ S++ + + L +CC+D+G+ A +T GNA+E + W E + +
Sbjct: 65 RRVLVSGVNPEASREDIRNLSRAVRRLYDCCVDLGFTAADTVGNARETAEWTEAMRYRSL 124
Query: 123 LIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
IVT DYHMPR LEL+ + + V+ Y + + L+ + + + R++++EY K L
Sbjct: 125 TIVTADYHMPRAMLELRAVFHGTGVRLSTYAVPTPALKSSHWWRQPRAARLMVVEYCKYL 184
Query: 181 LL 182
+
Sbjct: 185 AI 186
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 7 GLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIERAFELLEN 59
GL + ++ + I +RY + IP P++ +A+VVLTG R++ LL
Sbjct: 20 GLLITVVVLSLATAWTIGLVRYASR--IPTQPTLVEPAAAVVVLTGGSKRMDAGVALLAK 77
Query: 60 QIGEKIFISGVHHSVSKDILLQKIP-----IRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+F+SGV H V + IP + Q +CC+ +GY A +T GNA+E + WA
Sbjct: 78 GTAPVLFVSGVDHRVDPARIRDLIPDAGDSLDQATIDCCVVLGYGASDTLGNARETALWA 137
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+++VT +YHMPR LE V+ +PYP+I D+ ++ L ++
Sbjct: 138 RATERTSLILVTSNYHMPRARLEFTHALPEVRLVPYPVIPPDVRMDAWWRWPGTLGLVAG 197
Query: 175 EYLKILLLSIQLSLS 189
E+ K + +++ L+
Sbjct: 198 EWTKYVFARVRIGLA 212
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G + + G F + + D AIVVLTG R+ FELL K+F
Sbjct: 39 GALTLAVAWFAGLFLFAAGLPRTPPEDDRQTDAIVVLTGGSERLAAGFELLRAHRARKLF 98
Query: 67 ISGVHHSVSKDILLQ---KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
ISGV+ V LL+ + P DL ECCI +GY A +TEGNA E + W + F +
Sbjct: 99 ISGVYRGVDVQELLRLSRQAP--GDL-ECCIVLGYAADDTEGNAAETALWVRQEGFRSLR 155
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT +YHMPR+ +E +R V I +P+ ++ +++ EY K LL
Sbjct: 156 VVTANYHMPRSLVEFRRALPEVDLIAHPVAPPNVRLEHWWRWPGTASLIVGEYNKFLLAW 215
Query: 184 IQLSLSTQTAS 194
+ L A+
Sbjct: 216 TRALLPVPAAT 226
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 29 MHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
+ + D +V+ A+VVLTG R+ LLE G K+F+SGVH V LL++ +
Sbjct: 37 IRVEDQSTVTDAVVVLTGGAERLNSGIALLEAGRGRKLFVSGVHRGVDLPDLLRQAHVSP 96
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ A CCI +G+ A +T GNA E +AW + F + +VT YHM R+ LEL+R
Sbjct: 97 ERARCCIVLGHAADDTVGNATETAAWMGREGFSSLRLVTAAYHMRRSLLELRRALPDATI 156
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
I +P+ + + +L +EY K L
Sbjct: 157 IAHPVFPDAFKRDQWWRWPGTAHLLAVEYTKYL 189
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 9 FVCL-IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+CL + ++ GF F Y H + IVVLTG RI+R +LE +K+ +
Sbjct: 14 LICLFMLWLGGFWLF--YSFHAHPTNKQVTDGIVVLTGGAGRIDRGLMMLERHQAKKMLV 71
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V + L I L ECC+D+G +A++T NAQE + W N++H V ++T
Sbjct: 72 SGVNRQVKAEELAALYDIPSHLIECCVDLGTQAVDTSSNAQETAEWITLNHYHSVRLITT 131
Query: 128 DYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R EL I ++ + I SH RV +IEY K L
Sbjct: 132 DWHMARARFELSLMIGKDIKVVEDAIPSH-----------AGWRVWIIEYCKYL 174
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
AIVVLTG R+ ELL +K+F+SGV+ V LL+ ECCI +
Sbjct: 56 TDAIVVLTGGRNRLSTGLELLAAGRAKKLFVSGVYDGVEVQELLKLSRHSPTEMECCITL 115
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
GY A +T GNA E + W FH + +VT +YHM R+ LEL V +P+P+++
Sbjct: 116 GYSADSTIGNAYETADWMHDQGFHSLRLVTANYHMRRSLLELSMAMPDVDLLPHPVVAPT 175
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + +L+ EY K+L++ ++
Sbjct: 176 VHLDDWWMWPGTANLLVTEYNKLLVVGLR 204
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L C F GF F+ + P + P IV LTG RI+ + LL GEK+
Sbjct: 12 LLACFAF-AGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGEKLL 68
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV + LL LAE I +GY+A +T GNA E + W N+ +++VT
Sbjct: 69 ISGVDTQTTLGELLPPT-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVT 126
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
YHM R LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 127 ASYHMRRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWL 177
>gi|329114135|ref|ZP_08242897.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
gi|326696211|gb|EGE47890.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
Length = 216
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHS 73
F GF F+ + P + P IV LTG RI+ + LL GE++ ISGV
Sbjct: 40 FAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGERLLISGVDTQ 97
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ LL LAE I +GY+A +T GNA E + W N+ +++VT YHM R
Sbjct: 98 TTLAALLPST-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHMRR 155
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 156 ALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWL 199
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
V L+ +++GF F ++ Q P D AIVVLTG RI+R LL++ +++ IS
Sbjct: 8 VTLLGWMLGFAWFAIFLPQ---PLDGRQTDAIVVLTGGAGRIDRGLALLQDGAAKRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + + L CCI +G +A++T NA E + W E+ +F V ++T D
Sbjct: 65 GVDRSVRPVELAAQYKVPERLFSCCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTD 124
Query: 129 YHMPRTFLELQ 139
+HM R+ LEL+
Sbjct: 125 WHMRRSALELR 135
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
GL + L++ ++GFI F ++ + A++V TG RIER E+++ + +
Sbjct: 6 GLAIVLVW-VLGFIWFAGWLPGPAPMER--TDAVIVPTGYAGRIERGLEVVQTDSADTLL 62
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
++GV V + + +D+ ECC+ +G+ A +T GNAQE WAE + + +VT
Sbjct: 63 VTGVDPEVKPGEFAAQFKVPEDVMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRLVT 122
Query: 127 HDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
D+HM R EL+R + V+ I ++ L +LLIEY K L+
Sbjct: 123 SDWHMRRAATELRRQLPGDVKLI-----------KDAVRSEPSLWLLLIEYHKWLV 167
>gi|148555918|ref|YP_001263500.1| hypothetical protein Swit_3011 [Sphingomonas wittichii RW1]
gi|148501108|gb|ABQ69362.1| protein of unknown function DUF218 [Sphingomonas wittichii RW1]
Length = 177
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+I GF++F ++ Q PD + IVV+TG R+ER LLE + +++ ISG V
Sbjct: 13 WIAGFMAFALFLPQ-PAPDGIATDGIVVMTGGRGRVERGLRLLEAKRAKRLLISGADRRV 71
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
L + L ECC+D+G+++++T NA EA+ W + + + +VT D+HM R
Sbjct: 72 RPHELAAQFKAPMALVECCVDLGHESVDTRSNAAEAADWIARRRYRSIRLVTSDWHMVRA 131
Query: 135 FLELQRINST 144
+L+ N+T
Sbjct: 132 RFDLR--NAT 139
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ +G I+ R + M P IVVLTG R++ ELL ++ ISG +
Sbjct: 43 WFLGDIAEERPINPM-----PHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISGAGNGT 97
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I + I +G+ A T GNA+E +AWA +++ +++VT DYHMPR
Sbjct: 98 YLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRA 157
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
LEL R V IP P+ + ++ + +L++L+ E+ K +++ ++L
Sbjct: 158 LLELHRALPGVTLIPEPVRPPAM---TNPGQPHMLKILVTEFCKYIVVRLRLG 207
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF F V M AIV LTG+ RI A LL ++ ISGVH +
Sbjct: 1 MCGFFIFAYSVSIMPSTRLKDADAIVALTGDEERIAAAVRLLSEGKARRLLISGVHKTTR 60
Query: 76 KDILLQKIPIRQD----LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++ R L CC+D+ A NTE NA E + W K + +++VT YHM
Sbjct: 61 APQIMSLTTSRGSRSWSLFSCCVDLD-NAHNTEANAAETTNWVRKRGYRSIIVVTSTYHM 119
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
PR +EL + V+ +PYP+ + L+E + VL EY+K
Sbjct: 120 PRALIELHQAMRDVELVPYPVRAPRLDER-WWRDSRTAWVLWKEYMK 165
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ +G I+ R + M P IVVLTG R++ ELL ++ ISG +
Sbjct: 43 WFLGDIAEERPINPM-----PHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISGAGNGT 97
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I + I +G+ A T GNA+E +AWA +++ +++VT DYHMPR
Sbjct: 98 YLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRA 157
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
LEL R V IP P+ + ++ + +L++L+ E+ K +++ ++L
Sbjct: 158 LLELHRALPGVTLIPEPVRPPAM---TNPGQPHMLKILVTEFCKYIVVRLRLG 207
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 38 SAIVVLTGEPIR-IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
+ +V+LTG R I+ +L G+++ ISG H V K+ L + + +R L CC+D+
Sbjct: 45 TGMVILTGGAGRRIQHGLDLFAQGYGDRVLISGTHPLVDKEDL-EGLGVRDSL-HCCVDL 102
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
G +A T GNA EA WA + + +L+VT D+H+PR LEL+ + + I + +
Sbjct: 103 GPRARTTIGNALEARDWARRRGYDTILLVTSDFHLPRALLELEAVAPELTVIGIAVDTRS 162
Query: 157 LEENSSIFKIKILRVLLIEYLKILL 181
+ + RVL EY+K +L
Sbjct: 163 APSANWMRSPSAWRVLAEEYIKYIL 187
>gi|254292607|ref|YP_003058630.1| hypothetical protein Hbal_0231 [Hirschia baltica ATCC 49814]
gi|254041138|gb|ACT57933.1| protein of unknown function DUF218 [Hirschia baltica ATCC 49814]
Length = 197
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L CL F+SF Q+ P D + A++ LTG RI A E+ ++Q +
Sbjct: 13 LVFCLFLIGYDFVSFSYRAAQLATPQFDTSNPHAVIALTGGSNRIAFAAEIAKDQ-NLPL 71
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
FISGV+ D + + ECC +GYKA T N E + W+ K+ + ++IV
Sbjct: 72 FISGVNREAKPDEVAIAAGVDTAFFECCTTLGYKARTTYENGLEVAQWSTKSGYTRLIIV 131
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
T +YHM R LEL+R V + S ++ ++ ++ + + IE++K
Sbjct: 132 TSNYHMERALLELERAMPNVTLTGLAVASPAIKADAWWTDMRSAKRMGIEWVK 184
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L+ +++GF F ++ + P D AIVVLTG P RI+R L++ ++ IS
Sbjct: 8 LALLGWVLGFAWFAIFLPE---PLDGRRTDAIVVLTGGPGRIDRGIALMQQGAARRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + L +CCI +G +A++T N E + W + ++ V +VT D
Sbjct: 65 GVDRSVRPGELAAQYDAPEALFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLVTTD 124
Query: 129 YHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+HM R+ LEL Q + + + + SH L VL+ EY K LL I
Sbjct: 125 WHMRRSALELTQALPPRIHIVYDAVPSH-----------PSLSVLMREYNKYLLRRI 170
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L+ +++GF F + Q P D AIVVLTG RI+R LL++ +++ IS
Sbjct: 8 LTLLAWMLGFAWFAILLPQ---PLDGRQTDAIVVLTGGAGRIDRGLSLLQDGAAKRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + L CCI +G +A++T NA E + W E+ +F V ++T D
Sbjct: 65 GVDRSVRPAELAAQYDAPERLFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTD 124
Query: 129 YHMPRTFLELQ 139
+HM R+ LEL+
Sbjct: 125 WHMRRSALELR 135
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ IF + F F+ + + P + A++VLTG P RI R E++E + +++F+
Sbjct: 5 LLAAIFLVYAF-GFLGFAMTLPAPAAKTETDAVIVLTGGPGRIARGLEVVEQNMAKEMFV 63
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + ++ + L +CC+ +GY A++T NA E + W ++ F +VT
Sbjct: 64 SGVDPEVKPNEFAEQFEVSSRLMDCCVTLGYLAVDTRSNAGEVAQWMKEKEFTSARLVTT 123
Query: 128 DYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++HM R + E+ + + + + ++SH L L +EY K+L +
Sbjct: 124 NWHMARAYSEVAGTLPAGISIVKDAVVSH-----------PDLATLFLEYNKLLASEVSQ 172
Query: 187 SL 188
L
Sbjct: 173 GL 174
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
L+ GF+ F + H+ PS IVVLTG R+ +LL G + ISG
Sbjct: 38 ALLVLSGGFLWFA--WQSQHVLRAPSHADGIVVLTGGAERVATGLKLLAAGRGSVLLISG 95
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V S L + I E + +GY+A T GNA E + WA + + V++VT Y
Sbjct: 96 VAKGASLGTLARVAGIDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVIVVTAGY 155
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
HMPR EL+R V I YP H ++ S+ + IL++L EYLK L + LS
Sbjct: 156 HMPRALAELRRAMPDV--ILYPETVHP-DQGGSL--LNILKLLSSEYLKWLGAELHLS 208
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 8 LFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L CL ++ GF FI+ + + P IV LTG R++ LL G
Sbjct: 47 LLTCLALGGLWLAGFAWFIQDASKASV-TAPVCDGIVALTGGEQRVDTGITLLRGGYGHL 105
Query: 65 IFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+ ISGV H ++ + LQ+ + LAE I +G +A +T GNA E + WA N+ H +
Sbjct: 106 LLISGVGPHVTLQHILHLQQESLSSPLAER-ITLGRRATSTIGNAHETAQWARDNHLHRL 164
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
L+VT YH+ R LE+ R+ + +PYP++ L+ + + L ++ EY K L
Sbjct: 165 LVVTAGYHIRRAVLEIHRVAPDLALVPYPVVPLALQ---APLSRRTLFLMFREYNKFL 219
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
D + AIVVLTG R+ +LL +G K+F+SGV V+ D L I +
Sbjct: 38 DQTTTDAIVVLTGGSERLPVGLDLLARGLGRKLFLSGVGVEVTLDDLRAAIVDVPENLRS 97
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ +G+ AL+T GNA+E + W +F + +VT YHMPR+ +E + V+ I +P+
Sbjct: 98 RVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPV 157
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
+++ R++ EY K L+ ++ +LS
Sbjct: 158 FPGSVKQQEWWMWKGTARLMAEEYSKFLVAWLRRTLS 194
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
Y L ++ + +GF F + Q + S A++V TG P RI + ++LE +++
Sbjct: 6 YLLAASVLVWALGFFWFAAALPQPA--EELSTDAVIVPTGGPGRIAQGLQVLEQGQAQRM 63
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++GV V++D + + + +CCI +G +A++T NA E + W N+ + +V
Sbjct: 64 LVTGVDPEVTRDEFAAEFEVDEARMDCCITLGSEAVDTRSNATETAEWVAANDITSLRLV 123
Query: 126 THDYHMPRTFLELQR 140
T D+HM R EL R
Sbjct: 124 TTDWHMRRAAGELDR 138
>gi|103488367|ref|YP_617928.1| hypothetical protein Sala_2890 [Sphingopyxis alaskensis RB2256]
gi|98978444|gb|ABF54595.1| protein of unknown function DUF218 [Sphingopyxis alaskensis RB2256]
Length = 176
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 9 FVCLIF--FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
+ L+F +++GF F + AIVV+TG P RI+RA E LE +++
Sbjct: 5 LISLLFLVWVLGFAWFALLLPLPAP--PQKTDAIVVVTGGPGRIDRALERLEAGDAKRLL 62
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV V L + L +CCI +G+ A +T NA E +AWA++ + + +VT
Sbjct: 63 ISGVAREVKPRELAAEYGRPVALFDCCIALGFDAEDTRSNATEVAAWAKRRKYKSIRLVT 122
Query: 127 HDYHMPRTFLELQR 140
D+HM R E+ R
Sbjct: 123 TDWHMRRAEYEIGR 136
>gi|87198723|ref|YP_495980.1| hypothetical protein Saro_0699 [Novosphingobium aromaticivorans DSM
12444]
gi|87134404|gb|ABD25146.1| protein of unknown function DUF218 [Novosphingobium aromaticivorans
DSM 12444]
Length = 182
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +I + +GFI F ++ + + IVVLTG RI A LL+ G K+ +
Sbjct: 11 LSLLMIAWALGFIWFAVFLPR-PAAEPARTDGIVVLTGGSGRIPHALRLLQTGAGRKLLV 69
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + + L CCI +GY A++T NA E++ W + N V +VT
Sbjct: 70 SGVDREVRPREFAVEYDVPSRLMTCCIVLGYDAVDTRSNAVESARWMQTNRIRSVRLVTT 129
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R +L Q P ++ + E++ + + R+L IEY K++
Sbjct: 130 DWHMRRAAFDL------AQEAPKDLV---IVEDAVVSRPS-FRILFIEYNKLV 172
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ + +GF +F+ + H ++ + AIVV TG RI+R LL+ +++ ++GV
Sbjct: 10 LGWCLGFAAFM--LSLPHPLENNTTDAIVVPTGGAGRIDRGIALLQAHQAKRMLVTGVAP 67
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
V L + L CCID+G +A++T NA+E + W ++ + V +VT D+H+P
Sbjct: 68 GVRPIDLARTYRTAPSLFSCCIDLGLEAVDTRSNAEETARWVREHGYRTVRLVTSDWHLP 127
Query: 133 RTFLEL 138
R +EL
Sbjct: 128 RARMEL 133
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + GF+ F+ V + + D S AIVVLTG R+ +LLE + +++F
Sbjct: 16 LVALAALWSGGFLWFVDEVPRA-VDDQTSHTDAIVVLTGGRERLTTGLDLLEAGLSQRLF 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ V ++Q L E + +GY A +T GNA E + WA ++N + IVT
Sbjct: 75 ISGVYKGVDLAEIIQLGRGHAGLKEAVV-LGYAADDTVGNAIETALWATEHNLRSLRIVT 133
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
YHMPR E + + I +P+ ++ +L EY K L
Sbjct: 134 GAYHMPRALAEFRHALPEITLIAHPVFPDQVKSREWWRWPGTAALLATEYSKYL 187
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W + ++ + +GF+ F + Q A++V TG RI+R E+L+
Sbjct: 3 WRLFLLVVVAYALGFMWFAAALPQPRF--EGETDAVIVPTGAAGRIDRGLEVLDGGKARM 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + + CC+ +G+ A++T GNA E + W +N + +
Sbjct: 61 MLVTGVDPEVRPAEFAAEFEVSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRL 120
Query: 125 VTHDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT D+HM R EL Q++ + ++ + + S L +L +EY K+L
Sbjct: 121 VTTDWHMRRASGELRQKLPTNIRIVEDAVASE-----------PSLGILFLEYNKLL 166
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQI 61
W + I + GF F + P+ P I VLTG P R++ LL
Sbjct: 15 LWLLPALLAILVVAGFALFTGQSRAR--PELPLRQTDGIAVLTGGPQRVDAGLRLLAEGH 72
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAE---CCIDIGYKALNTEGNAQEASAWAEKNN 118
+ ISG + + L ++ + L E + +G +A +T GN QE + WAE
Sbjct: 73 ARALIISGTGRDATLEELARRAGLPDPLPEGFAARVTLGREATSTRGNGQEVAEWAEARQ 132
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ +VT +HMPR LEL+R V +P+P+
Sbjct: 133 IGSLRVVTAAFHMPRALLELRRTLPGVALVPHPV 166
>gi|162149067|ref|YP_001603528.1| hypothetical protein GDI_3297 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787644|emb|CAP57240.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 197
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 18 GFISFIRYVKQMHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVS 75
GF F R + P P ++ IV LTG RIE + LL G ++ ISGV H+ +
Sbjct: 18 GFAWFFR--DALRPPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHATT 75
Query: 76 KDILLQKIPIRQDLAECC-------IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + P Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 76 GSVASRLQP--QGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+ R +E++R + PYPI L+ + ++ +R++ EY K ++ S+ L+
Sbjct: 134 YHIRRATMEIRRTVPGIVLYPYPIQPPALQ---APLRVASVRLMATEYDKWIMASLGLT 189
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE- 91
DH IVV TG R+ LL + +K+ ISGV V+K +L+Q++ +
Sbjct: 53 DH--TDGIVVTTGGQQRLVEGLNLLVSGTTDKVLISGVGKGVNKAVLVQELNLDDQQVSA 110
Query: 92 --CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
CC+++ Y AL+T GNA A AW + N + +VT +YHMPR + R V
Sbjct: 111 LFCCVELEYGALDTRGNALAARAWIDLNGLKSIRLVTANYHMPRAEIVFSRAIPNVDIHQ 170
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ + + L+ I+R+L EY K
Sbjct: 171 WAVSPNALDVERWWQDPMIIRLLTREYAK 199
>gi|209545186|ref|YP_002277415.1| hypothetical protein Gdia_3070 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532863|gb|ACI52800.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 18 GFISFIRYVKQMHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVS 75
GF F R + P P ++ IV LTG RIE + LL G ++ ISGV H+ +
Sbjct: 34 GFAWFFR--DALRPPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHATT 91
Query: 76 KDILLQKIPIRQDLAECC-------IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + P Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 92 GSVASRLQP--QGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 149
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+ R +E++R + PYPI L+ + ++ +R++ EY K ++ S+ L+
Sbjct: 150 YHIRRATMEIRRTVPGIVLYPYPIQPPALQ---APLRVASVRLMATEYDKWIMASLGLT 205
>gi|330993951|ref|ZP_08317881.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
gi|329758897|gb|EGG75411.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
Length = 201
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC- 93
P IV LTG RIE + LL ++ ISGV ++ L+ +P LA
Sbjct: 27 PRADGIVALTGGQGRIEESVRLLVQGRAGRLLISGVDPHATRGDFLRHLPPPVPLAAWTH 86
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+G +A +T GNA E +AW + H +++VT YH+ R LE+ R V+ PI
Sbjct: 87 TTLGSRATSTLGNADETAAWVREYGLHSLIVVTAGYHIRRAMLEISRTVPGVRLYGDPIR 146
Query: 154 SHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
S L F +R++++EY K LL + +
Sbjct: 147 SPALAHP---FHPATMRLMVVEYDKWLLACLDV 176
>gi|326386450|ref|ZP_08208073.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209111|gb|EGD59905.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
Length = 194
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + ++ +++GF+ F ++ + DH A++ LTG RI+R E+L +++ +
Sbjct: 14 LSLMVLAWLLGFLWFALFLPRPA--DHTRTDAVIALTGGSGRIQRGIEVLRADEAKRMLV 71
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + + L CC+ +GY++ +T NA EA+ W + + V +VT
Sbjct: 72 SGVDSEVKPAEFEAEYGVPASLFACCMTLGYESFDTRSNALEAARWIARYDLRSVRLVTT 131
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R +L + + + I+ + + S +R+L +EY K L
Sbjct: 132 DWHMRRAAFDLA-VAAPKGLV---IVEDAVPSHPS------MRILFVEYNKFL 174
>gi|296116632|ref|ZP_06835242.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
gi|295976844|gb|EFG83612.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
Length = 227
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVSKDILLQK---IPIRQDLAECCIDI 96
V LTG RIE + +L+ ++ ISGV H+ D L + +P+ L +
Sbjct: 58 VALTGGQGRIEASLQLMAQHRARRLLISGVDPHATLGDFLTRAPRVLPLEVWLRTT---L 114
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
G +A +T GNA E + W + H +++VT YH+ R +E+ R V P+ +
Sbjct: 115 GRQATSTLGNADETAQWVRAQDIHSLIVVTAGYHIRRAMMEIARAAPGVTLYPFAVQPPA 174
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
L ++ R+L++EY K LL I + T+
Sbjct: 175 LLHPR---RLATWRLLVVEYDKWLLACIDTARWTR 206
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
PS VVLTG R+ F+LL NQ +K+ ISGV+ + ++ P +L+E +
Sbjct: 39 PSADCAVVLTGGAGRVREGFDLLVNQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDV 98
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ ++ T GNAQ++ E +L+VT HM R++
Sbjct: 99 VLDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSY 139
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 32 PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P AIVVLTG R+E L G+K+F+ GV SV K L Q E
Sbjct: 34 PRDTQADAIVVLTGGRGRVEEGVRLYRAGQGKKLFLIGVDPSVKKRELF------QGDGE 87
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPY 150
+ + + NT NA A K+ + ++T YHM R T L + V P+
Sbjct: 88 GGVYLEQNSRNTLENAIYARDLIMKHKVRSIKLITSRYHMKRSTILFRNALPRYVAIYPH 147
Query: 151 PIISHDLEE----NSSIFKI 166
P+ S +L+E +S FK+
Sbjct: 148 PVDSSNLKEQWWRHSGSFKL 167
>gi|301165835|emb|CBW25408.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 212
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
+ S IVV TG+ RI A +L + IFI+GV+ S D LL+ + I +++
Sbjct: 57 NRSPDLIVVFTGDSGRIPLAVQLAKKYKQSNIFITGVYSKNSVDSLLRPLKIDEEIDTNL 116
Query: 94 IDIGYKALNTEGNA-QEASAWAEKNNFHHVLIVTHDYHMPR 133
+ I Y A NT N E+ +++++HDYH+ R
Sbjct: 117 LTIDYLARNTVENVISTLRHLRERKGNKKIIVISHDYHVMR 157
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVV----LTGEPI-----R 49
R+ W G+ +CLIF ++ ++ RY + + DHP +A+V+ +P R
Sbjct: 4 RWLWSGVILCLIFALLIIPFWVQASRY-DDVRVADHPRDAALVLGAALWDSQPSPALRER 62
Query: 50 IERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ A L + I SG +S+ +++ + Q + + + ++ NT+ N
Sbjct: 63 LQMALSLYHKGQVQWIICSGGVGDDGISEAEGMKRYLMEQGVPPKDLLLEEESTNTKENL 122
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---------LELQRINSTVQFIPYPIISHDLE 158
Q + + N+ ++ +VTHDYHM R+ E ++S+V F PY +
Sbjct: 123 QYSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPAPVHSSVLFTPY----YKAR 178
Query: 159 ENSSIFKIKILR 170
E SI K ++ +
Sbjct: 179 ECLSIIKYRLTK 190
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 91 ECCIDIGY---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
E +DI + ++ NT NA +K + HHV +VTH YHMPR+ Q+ TV
Sbjct: 41 ELNVDIAWPEGESRNTWENAHFTKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSP 100
Query: 148 IPYPIISHD------LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+P +S L S + I R+ L EYL +L S++
Sbjct: 101 MPTGQLSQQSSTSYWLNWLPSAGALHISRLALHEYLGLLFYSLK 144
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 1 MRYFWYGLFVCL-IFFIMGFISFIRY------VKQMHIPDHPSVSAIVVLTGEPIRIERA 53
M F+ GLF L IF ++ + F+ + V+Q I + AIVVL G R+E
Sbjct: 1 MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDI----ATDAIVVLAGGRGRVEEG 56
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L + G+ +F+ GV V K L Q+ + LA+ + + + NT NA
Sbjct: 57 IRLFRAKKGKYLFLIGVDPMVRKQELFQERK-GESLADRVV-LENASRNTLENALYGREI 114
Query: 114 AEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
++ + + ++T YHM R T + + + P+P+ + +L+E
Sbjct: 115 IDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKE 161
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 32 PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P AIVVL G R+E L + G +F+ GV +V K L + P D
Sbjct: 34 PRQVQADAIVVLAGGKGRVEEGVRLFRERRGTWLFLVGVDPTVRKSDLYRPKP--GDPPA 91
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPY 150
+ + + NT NA ++ VL++T YH+ R+ + + + V PY
Sbjct: 92 DNVVLEKLSRNTLENAIYGRDILAEHKVRSVLLITSRYHLKRSAILFRNALAPDVALYPY 151
Query: 151 PIISHDLEE 159
P+ S +++E
Sbjct: 152 PVDSSNVKE 160
>gi|157965010|ref|YP_001499834.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
gi|157844786|gb|ABV85287.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
Length = 171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE LL+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGSALLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + LL++ R + + I K ++ E N ++A + N +++V H
Sbjct: 65 TGIESTEQLKNLLKE---RNVIEQQVILAPSKIMSEEDNIKKAVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L+++ + + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKVIHSSHNIYIVPYPVFS 151
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 7 GLFVCLIFFIMGFI-SFIRYVKQMHIPDH--PSVSAIVVLTGEPIRIERAFELLE-NQIG 62
GL V L G S +R ++ +IP+ P +AIVVL G ++ + G
Sbjct: 44 GLLVLLTSSNSGVSQSLVRSLEWQNIPNGELPKATAIVVLGGGTKAPTPPRPWVDVGEAG 103
Query: 63 EKIFISGVHHSVSKDILL-----------QKIPIRQDLAECCIDIGYK---------ALN 102
++I + + K L ++ P D+ E +++G + +LN
Sbjct: 104 DRILYGALLYKQDKAPWLILSGGRIQWDGKEPPESADMKEIAVEMGVRESAILQDPDSLN 163
Query: 103 TEGNAQEASA-WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDL 157
T NA AE N VL+VT HMPR+ L QR ++ IP P + DL
Sbjct: 164 TYQNAVNVRQILAENNLTGKVLLVTSALHMPRSLLVFQR--QGIEVIPAPTDFLVSQQDL 221
Query: 158 EENSSI 163
+ +++I
Sbjct: 222 QPSTTI 227
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
AIVVLTG R+E +L G+ +F+ GV D L++K + Q + +
Sbjct: 39 ADAIVVLTGGRGRVEEGVKLYRAGQGKLLFLIGV------DPLVKKHELYQGAGAENVYL 92
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISH 155
+ NT NA A K+ + ++T YHM R T L V P+P+ S
Sbjct: 93 EKTSRNTLENAIYARDMIMKHKVSSIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVDSS 152
Query: 156 DLEEN------------SSIFKIKILRVLLI 174
+L+E S +K ILRV +
Sbjct: 153 NLKEEWWNHKGSFKLLFSEFYKYCILRVFFL 183
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG 97
AIVVLTG R+E +L G+ +F+ GV D L++K + + + +
Sbjct: 40 DAIVVLTGGRGRVEEGVKLYRGGRGKLLFLIGV------DPLVKKHELYRGAGAENVYLE 93
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHD 156
+ NT NA A K+ + ++T YHM R T L + + P+P+ S +
Sbjct: 94 KTSRNTLENAIYARDMITKHRVSSIKLITSRYHMKRSTILFRNALPKDIAIYPHPVDSSN 153
Query: 157 LEE 159
L+E
Sbjct: 154 LKE 156
>gi|15893279|ref|NP_360993.1| hypothetical protein RC1356 [Rickettsia conorii str. Malish 7]
gi|229587249|ref|YP_002845750.1| hypothetical protein RAF_ORF1242 [Rickettsia africae ESF-5]
gi|29839740|sp|Q92FX1|Y1356_RICCN RecName: Full=Uncharacterized protein RC1356
gi|15620500|gb|AAL03894.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022299|gb|ACP54007.1| Unknown [Rickettsia africae ESF-5]
Length = 171
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 23 IRYV-KQMHIPDHPSVSAIVVLTGEPI--RIERAFELLENQI--GEKIFISGVHHSVSKD 77
+RY+ K + P VS ++++ P R E+A +LL+ EK +S + V +D
Sbjct: 19 LRYIYKHLDQGQAPQVSDLIIVAEGPAVERAEKAVQLLKAAYSRAEKNIVSPRYTDVGED 78
Query: 78 ILL---QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ Q R++L E +A +T NA + + +H ++VT DYHM RT
Sbjct: 79 LFAGYQQLGAERENLIEEN-----QATSTWTNATTSLDLMDDLGYHSAIVVTSDYHMRRT 133
Query: 135 FLELQRINSTVQF 147
L QR N F
Sbjct: 134 RLAFQRANRDYGF 146
>gi|157829194|ref|YP_001495436.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933919|ref|YP_001650708.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
gi|157801675|gb|ABV76928.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909006|gb|ABY73302.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
Length = 171
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFVGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|51474043|ref|YP_067800.1| hypothetical protein RT0866 [Rickettsia typhi str. Wilmington]
gi|51460355|gb|AAU04318.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 174
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 8 LFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + L+ F + G + Y+ + + + +AI+V G +IE LL+ +
Sbjct: 6 LLIILVIFTLWVGGFCYYLYLINSYKLNSNTTNAIIVFAGGGHKIETCIALLKAGYAPIL 65
Query: 66 FISGVHHSVS-KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
FI+G+ + K++L++ I Q + I K ++ E N ++A + N +++
Sbjct: 66 FITGIESAEHFKNLLMEHNVIEQQV----ILAPNKIMSEEDNIKKAIDFIVTYNLTFIIL 121
Query: 125 VTHDYHMPRTFLELQRI---NSTVQFIPYPIIS 154
V H+Y++P +LQ+ ++ V +PYP+ S
Sbjct: 122 VEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFS 154
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 62 GEKIFI-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
G ++F SG ++++ LL IP + L E ++LNT+ NA S EK+
Sbjct: 124 GGQVFGDSGNEANIAQRQLLGLGIPAKDILIEN------RSLNTQQNAVYTSQILEKHQL 177
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDL-----EENSSIFKIKILRV 171
++VT +HMPR LE QR + VQ I YP + S L + + S +
Sbjct: 178 TRPVLVTSAFHMPRAALEFQR--AGVQAIAYPTDYLASEKLSLYAGKLSPSAGAMSTTGT 235
Query: 172 LLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 236 ALKEYLGILALKLK 249
>gi|238651121|ref|YP_002916979.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
gi|238625219|gb|ACR47925.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
Length = 171
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIISEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|293607329|ref|ZP_06689669.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814279|gb|EFF73420.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 184
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 41 VVLTGEP-----IRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQK-IPIRQ 87
V+ TG+P R++RA++ +F+SG +V +D L+ + +P +
Sbjct: 41 VLPTGQPSPRLAARLDRAYDCYAAMQCRLVFVSGGVDPAGADEAAVMRDYLIARGVPAER 100
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + D N+ A+ ASA+ ++ + L+VT +H+PRT L L+R
Sbjct: 101 IVTDSAGD------NSWATARHASAYMREHGYTRALVVTQYFHVPRTVLALRR 147
>gi|34581055|ref|ZP_00142535.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262440|gb|EAA25944.1| unknown [Rickettsia sibirica 246]
Length = 171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPI 152
+Y+MP +L++ ++ + +PYP+
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPV 149
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 20/160 (12%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-I 94
SV A LT RI A L + +KI +G +LL DLA+ I
Sbjct: 95 SVKARPELTDSADRITDAIRLYKAGKVKKILFTG-----GSGLLLSDTYREADLAKSLFI 149
Query: 95 DIGYK---------ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D+G K + NT NA E + NF L++T +HM R+ Q+ N V
Sbjct: 150 DLGVKEEDIILENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNV 209
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
P+P +S F++ + YL + LSI+
Sbjct: 210 --FPFPTDYRSFNTDSGAFELYLPSA---GYLDLTTLSIK 244
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 84 PIRQDLAECCIDIGY---------KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
P +D+A+ D+G ++LNT NA ++ +F VL+VT HMPR+
Sbjct: 154 PESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRKILDQRDFPKVLLVTSAIHMPRS 213
Query: 135 FLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL 172
L +R + IP P + H+L+E SS + +L L
Sbjct: 214 VLVFRR--QGIDVIPAPTDFLVSQHELDEPSSSSQAALLHSL 253
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+T GNA EKN F +++VT YHMPR+ + Q+ + + IPYP
Sbjct: 151 DTLGNAFFVKKICEKNGFKRIILVTSAYHMPRSVIVFQK--AGLDVIPYP 198
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 4 FWYGLF----VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
F+ G+F + L+ + F+ F + D S AIVVL G RIE L
Sbjct: 3 FFRGIFSLLVISLVVIAVLFVDFTYKTFSLRQRDVKS-DAIVVLAGGRGRIEEGVRLYRE 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+F+ GV +V K L + R + + + + + NT NA A ++N
Sbjct: 62 NRARWLFLIGVDPAVRKGELFTE--RRGERSGEGVFLENVSRNTLENALYAREMIVRHNV 119
Query: 120 HHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
+ ++T YHM R T + Q + + P+P+ S +L+E
Sbjct: 120 SSIKLITSRYHMKRATLIFRQVLPKDIAIYPHPVDSKNLKE 160
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS--VSKDILLQ 81
++++ +P H V IVVL GE R+ A EL + ++F+SG + + +++
Sbjct: 36 WLREESMPGHADV--IVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMA 93
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+P + EC ++ NT NA+ + + ++VT YH R +R+
Sbjct: 94 GVPAERIGHEC------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRV 147
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
V + + D S F I +L EYLK +++
Sbjct: 148 WPEVAWGARGVFPGDTLAKS--FPIYESGSILAEYLKRAWYAVR 189
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS--VSKDILLQ 81
++++ +P H V IVVL GE R+ A EL + ++F+SG + + +++
Sbjct: 36 WLREESMPGHADV--IVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMA 93
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+P + EC ++ NT NA+ + + ++VT YH R +R+
Sbjct: 94 GVPAERIGHEC------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRV 147
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
V + + D S F I +L EYLK
Sbjct: 148 WPEVAWGARGVFPGDTLAKS--FPIYESGSILAEYLK 182
>gi|91204866|ref|YP_537221.1| hypothetical protein RBE_0051 [Rickettsia bellii RML369-C]
gi|157826504|ref|YP_001495568.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
gi|91068410|gb|ABE04132.1| unknown [Rickettsia bellii RML369-C]
gi|157801808|gb|ABV78531.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
Length = 174
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 7 GLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L + IF I GF+ ++ Y+ + P + +AI+V G +IE LL+
Sbjct: 6 ALTILTIFAIWASGFVYYL-YLVNSYKPSSNTANAIIVFAGGGHKIETGIALLKAGYAPI 64
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+FI+G+ S LL++ L + I + ++ E ++AS + K N V +
Sbjct: 65 LFITGIETSDQLKNLLKE---NNVLEQQVILAPNQIMSEEDYIKKASDFILKYNITSVRL 121
Query: 125 VTHDYHMPRTFLELQRI----NSTVQFIPYPIIS 154
V ++Y +P L N+ + PYP+I+
Sbjct: 122 VAYNYDIPSIVNNLTTAISSSNNNIYIAPYPVIA 155
>gi|282857535|ref|ZP_06266763.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584622|gb|EFB89962.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 259
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R+ +A E+L K+ +SG+ + L +P + L E ++LNTEGN +
Sbjct: 109 RLRKAREILSCCGDGKLLLSGIESPLMARWLRASLPREKVLLE------TRSLNTEGNLR 162
Query: 109 EASA-----WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
E++ ++++ + V +VT +HM R + ++ + +P P S
Sbjct: 163 ESAVLLRRLYSDERSRPQVFLVTDRFHMARAWRWAKKFMPDFEVVPSPAPS 213
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 31 IPDHPSVSAI-VVLTGE-PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIR 86
+ D P+ + + VVL+G+ R+E AF L + + +++ +SG ++ +++ LL++ +
Sbjct: 59 VADKPAPAEVLVVLSGDRGERLEYAFRLYQEGLADRLLLSGGPLYADLTEADLLRRHALM 118
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT---FLELQRINS 143
+ E I + +A NT NA + E ++++ YHM R F E+ R S
Sbjct: 119 LGVPEYKIIMEPRATNTYQNALYSREMMEYYGLDSAIVISSPYHMRRVRALFDEVYR-GS 177
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++ + P+ + RV+L EYL++ +L
Sbjct: 178 DIRLVYLPVEDSWFDPERWWESAAGRRVVLAEYLRLTML 216
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 30 HIPDHP--SVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
+ P+ P V AIVVL GE R+ A L E + ++ IS H + +D +
Sbjct: 33 NAPEDPLRPVDAIVVLGGENDGRVPYAVSLAEQGLARQVVISNPHDA--RDPSTNEGCAT 90
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
D + T G AQ A +N + VL+V+ YH+PR QR
Sbjct: 91 TDPRFTVTCVAPHPATTRGEAQFTRTLAVQNGWTSVLVVSWRYHLPRARYIFQR 144
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY----PIISHDL 157
+T GNA+ + +++ + +VTH +HMPR +R +V P PI +H L
Sbjct: 170 DTSGNARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHLL 229
Query: 158 EENSSIFKIKILRVLLIEYLKI 179
+ S ++ R++L E L +
Sbjct: 230 QWLPSAQGLQASRLVLRECLGL 251
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 37 VSAIVVLTGEPIRIERAF---ELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAE 91
V AIVVL PI +RA EL + K+F+SG + + K++ + +E
Sbjct: 110 VDAIVVLGRGPISGDRAAVAAELWQAGRAPKVFVSGRGDAPYLVKELRKYGVSASALASE 169
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
C + TE NAQ + + H+L++T HM R+++ +R+ Q IP+
Sbjct: 170 DC------SQTTEENAQFTARLLQPQGVQHILLITDSPHMLRSWMTFERVG--FQVIPH 220
>gi|67459774|ref|YP_247398.1| hypothetical protein RF_1382 [Rickettsia felis URRWXCal2]
gi|67005307|gb|AAY62233.1| Uncharacterized conserved protein [Rickettsia felis URRWXCal2]
Length = 174
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+G + + Y+ + + + +A++V G +IE LL+ +FI+G+ +
Sbjct: 17 VGGLGYYLYLINSYKLNSNTTNAVIVFAGGGHKIETGIALLKAGYAPILFITGIESTEQL 76
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL++ R + + I K ++ E N ++A + N +++V H+Y+MP
Sbjct: 77 KNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLTSIILVEHNYNMPFMLN 133
Query: 137 ELQRI---NSTVQFIPYPIIS 154
+L++ ++ + +PY + S
Sbjct: 134 KLEKAIPSSNNIYIVPYLVFS 154
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 34/190 (17%)
Query: 18 GFIS--FIRYVKQMHIPDHP--SVSAIVVLTG--EPIRIERAFELLENQIGEKIFISGVH 71
G+I+ +R ++ ++P P AIVVL G +P R + + + G++I
Sbjct: 26 GWIAQNLVRSLETQNLPPTPIPQTRAIVVLGGGIKPALPPRPWVEV-GEAGDRILYGSQL 84
Query: 72 HSVSKDILL-----------QKIPIRQDLAECCIDIGYK---------ALNTEGNAQEAS 111
+ K L P D+AE +G +LNT NA
Sbjct: 85 YRQGKAPWLILSGGRVEWKGGGPPESADMAEIAQAMGVPTSAILQDPTSLNTYQNAVNVR 144
Query: 112 AWAEKNN-FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKI 166
+ NN +L+VT HMPR+ L QR ++ IP P I D+E + S F+
Sbjct: 145 KILKDNNILGPILLVTSALHMPRSLLIFQR--QGIETIPAPTDFSITQQDMEASQSSFQA 202
Query: 167 KILRVLLIEY 176
+L +L Y
Sbjct: 203 VLLNLLPDAY 212
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LF+ I F +GF+ + +P AI++L G RI A E I+
Sbjct: 6 LFLGFILFWIGFVPLRLAIAHQQ---YPQPQAILLLEGHRQRIPFAAEFWNQHPTLPIWF 62
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G ++ Q+I + + I ++ +T N + + HHV ++T
Sbjct: 63 TGSRTDRPRN---QRIFQQAGVPAEMIHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITS 119
Query: 128 DYHMPRT 134
DYHMPR
Sbjct: 120 DYHMPRA 126
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 31/176 (17%)
Query: 4 FWYGLFVCLIFFIM----GFISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIERAFELL 57
WY V F I G + F+ + + +P H AIVVL G R+E A E
Sbjct: 34 LWYAALVLWAFSIPTVADGLMHFVEGNRTVALPQTLH-QADAIVVLGGMIRRVEGAAEGE 92
Query: 58 ENQIGEKIFISGV---------------------HHSVSKDILLQKIPIRQDLAECCIDI 96
N ++ F +GV +V + LL + +++ + E + +
Sbjct: 93 WNDAADR-FEAGVTLYRAGKAPLLLFTRGRMPWSPDAVPEGELLVERALQRGVPEAALGL 151
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
NTE A + + + +++VT YHM R+ L + +V+ PYP+
Sbjct: 152 TAPVANTEDEAADVARLLRERGAERIILVTSAYHMRRSQLLFEHTGLSVE--PYPV 205
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++RA + +N + +IF+SG + ++ +++ + + I + L+T
Sbjct: 55 RLDRARQCYDNGLCHQIFVSGGIDKQGTDEARAMEDYLVKRGIPKERIVMDNMGLDTWDT 114
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ ASA+ + ++ L+VT +H+PR L L+R
Sbjct: 115 VRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFG 150
>gi|15604704|ref|NP_221222.1| hypothetical protein RP875 [Rickettsia prowazekii str. Madrid E]
gi|7388444|sp|Q9ZC92|Y875_RICPR RecName: Full=Uncharacterized protein RP875
gi|3861399|emb|CAA15298.1| unknown [Rickettsia prowazekii]
gi|292572540|gb|ADE30455.1| hypothetical protein rpr22_CDS854 [Rickettsia prowazekii Rp22]
Length = 174
Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS- 75
+G + Y+ + + + +AI+V +IE LL+ +FI+G+ +
Sbjct: 17 VGGFGYYLYLINSYKLNSNTTNAIIVFADGGHKIETCMALLKAGYAPILFITGIESTERF 76
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
K++L++ I Q + I K ++ E N +EA + N + +V H+Y++P
Sbjct: 77 KNLLMKHNVIEQQV----ILAPNKIMSEEDNIKEAINFIVTYNLTLITLVEHNYNIPFML 132
Query: 136 LELQRI---NSTVQFIPYPIIS 154
+LQ+ ++ V +PYP+ S
Sbjct: 133 NKLQKAIPSSNNVYIVPYPVFS 154
>gi|296139977|ref|YP_003647220.1| hypothetical protein Tpau_2273 [Tsukamurella paurometabola DSM
20162]
gi|296028111|gb|ADG78881.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 188
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFIS---GVHHSVSKDILL 80
Y++ I + AIVVL G P R E L E + ++ +S G S + +
Sbjct: 34 YIRPRTIDELRPADAIVVLGGNPYDRFEYGITLAERGLAPQVVLSNSVGAQDSRMQQLCD 93
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+++P Q C + + + T G AQE A++ + +++VT H+ R L+R
Sbjct: 94 ERVPDVQ--VTCFLPVPW---TTRGEAQELRRLAQERRWDEIIVVTTTAHVERARFILER 148
Query: 141 IN-STVQFIPYP 151
+ + +Q +P
Sbjct: 149 CSRAQLQMTDFP 160
>gi|239946686|ref|ZP_04698439.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920962|gb|EER20986.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 171
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + +I+GF + Y+ + + + +AI+V G +IE +L+
Sbjct: 2 IRKFLLTILAIFALWIVGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAMLKAG 60
Query: 61 IGEKIFISGVHHSVS-KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+FI+G+ + K++L + I Q I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAGQLKNLLKEHSVIEQQ----VILAPNKIMSEEDNIKKAVDFIVTYNL 116
Query: 120 HHVLIVTHDYHMPRTFLELQRI---NSTVQFIPYPI 152
+++V H+Y+MP +L++ ++ + + YP+
Sbjct: 117 TSIILVEHNYNMPFMLNKLKKAIPSSNNIYIVSYPV 152
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV 70
+I F+ G + + + P V AIVVL GE R L E + + +S
Sbjct: 17 VILFLNGASGTLLFARAQADP-LAKVDAIVVLGGEHDGREAYGVGLAEQGYADTVLLSNP 75
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKAL---NTEGNAQEASAWAEKNNFHHVLIVTH 127
+H ++ + R D+ C KA T G A A A AE +++ +++V+
Sbjct: 76 YHGTDA-VMAEACQPRSDIEVIC-----KAPVPGTTRGEALMARALAEARDWNSIIVVSW 129
Query: 128 DYHMPRT 134
YH+PR
Sbjct: 130 RYHLPRA 136
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 28 QMHIPDHPSVSAIVVLTGEP----IRIERAFE------LLENQIGEKIFISGVHHSVSKD 77
+ +P+ AIVVL G I E + + +L + G I +SG ++
Sbjct: 65 KYSVPEKFQADAIVVLGGGSYSTGILKEDSMKRLLTALILHKRTGLPIVLSGGAENLPDA 124
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ + + + + I ++ +TE NA ++ N+ V++VT YH+PR
Sbjct: 125 EIMKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLVTSAYHLPRAVFL 184
Query: 138 LQRINSTVQFIPYPI-ISHDLEEN 160
++ +V IPYP DL N
Sbjct: 185 FKKEGLSV--IPYPTDFKRDLRYN 206
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 38 SAIVVLTGEPI---RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR-QDLAECC 93
AIVVL G + RI+ A L + I + + I G VS+ + +K+ + Q++
Sbjct: 3 DAIVVLGGGKLSEGRIDEAIRLYKQGIAKYLIIVGGKEEVSE--MYKKVRSKIQNIENVY 60
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+D +L+T NA A EK N +LIVT ++H+ R
Sbjct: 61 VD--NNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIKRAL 100
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L V LI + F+ F + D + AIVVL G R+E L + G +++
Sbjct: 12 LIVVLIIVAVLFVDFAYKTFSLRQRD-VTTDAIVVLAGGRGRVEEGVRLFRERKGTYLYL 70
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEKNNFHHVLI 124
GV V K L R E D + + NT NA + + +
Sbjct: 71 IGVDPVVKKRDLF-----RDREGERLADRVFLENLSRNTLENALYGREIIMRKEVRSIRL 125
Query: 125 VTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEEN 160
+T YHM R T L Q + + P+P+ + +L+E
Sbjct: 126 ITSRYHMKRATLLFRQVLPRDIAIYPHPVDTTNLKER 162
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFE 55
+ LFV L+ +++G ++I +V + AI+VL P+ RI +
Sbjct: 17 WRLFVVLVIWLLGVTAWIVWVGERD--QAAKADAIIVLGAAAYDAKPSPVFEERIRHGLD 74
Query: 56 LLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L E Q + +G + S+ + ++ ++ + + I I + NT N EA
Sbjct: 75 LYEAQYAPLLIFTGGYGGSGARFSESQVARRYALKHGVPDDAILIETASRNTVQNLIEAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
++ N H V+IV+ HM R
Sbjct: 135 RLMDQRNLHRVIIVSDPLHMARAL 158
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 31 IPDHPSVSAIVVLTGEPI------------------------RIERAFELLENQIGEKIF 66
+P+HP I++L G I R+ R + L G ++F
Sbjct: 77 VPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLYGLPILLSGGQVF 136
Query: 67 I-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +++ +L+ +P Q E ++L T NA+ ++ + F H ++
Sbjct: 137 KDTGTEAEIARRVLISLGVPEEQIYTES------ESLTTRQNARYSAEILHREGFTHPIL 190
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L +++ ++ PYP
Sbjct: 191 VTSAFHLPRAVLNFEKLG--IEVTPYP 215
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ AIVVL G RIE L +F+ GV SV K L ++ + + + +
Sbjct: 38 NCDAIVVLAGGRGRIEEGSRLYRENHARWLFLIGVDPSVRKSDLFRE--RKGERSGEGVY 95
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI-NSTVQFIPYPIIS 154
+ + NT NA A N + ++T YHM R L + + + P+P+ +
Sbjct: 96 LEKVSRNTLENALYAREMIVGRNIDSIELITSRYHMKRATLIFRHVLPKDIAIYPHPVDT 155
Query: 155 HDLEE----NSSIFKIKILRVLLIEYLKILLLSI 184
+L+E +S F R+L E+ K L +
Sbjct: 156 KNLKEEWWNHSGSF-----RLLFSEFYKYCLFRV 184
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---------------RIERAFELLEN 59
F + F+S Y+K+ +IPD S ++++V+ G I R+ + FE+
Sbjct: 54 FFVYFLSKSFYIKEKNIPD--SQNSVIVILGGGITFFDGKYEVGNHTLKRLLKGFEIYR- 110
Query: 60 QIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ I ISG + +S+ +++ I + + I + KA T+ NA S +
Sbjct: 111 KTNAPIIISGGVIGKGISESAIMKDILVTFGVNINDIIVEDKARTTKENAIFVSKLLKGK 170
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPI 152
NF ++++VT HM R+ + ++ S IP YPI
Sbjct: 171 NFENIILVTSFLHMKRSIMLFEKY-SKKNIIPIVCDYPI 208
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 31 IPDHPSVSAIVVLTGEPI------------------------RIERAFELLENQIGEKIF 66
+P+HP I++L G I R+ R + L G ++F
Sbjct: 77 VPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLYGLPILLSGGQVF 136
Query: 67 I-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +++ +L+ +P Q E ++L T NA+ ++ + F H ++
Sbjct: 137 KDTGTEAEIARRVLISLGVPEEQIYTES------ESLTTGQNARYSAEILHREGFMHPIL 190
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L +++ ++ PYP
Sbjct: 191 VTSAFHLPRAVLNFEKLG--IEVTPYP 215
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISH 155
++LNT+ NA S +++ ++VT +HMPR LE QR + +Q YP + S
Sbjct: 157 RSLNTQQNAVYTSKILKQHQLTKPILVTSAFHMPRAALEFQR--AGMQTTAYPTDYLASE 214
Query: 156 DL-----EENSSIFKIKILRVLLIEYLKILLLSIQ 185
L + + S I L EYL IL L ++
Sbjct: 215 KLSLYAAKLSPSAGAISTTGTALKEYLGILALKLK 249
>gi|85001627|ref|XP_955525.1| hypothetical protein [Theileria annulata]
gi|65303671|emb|CAI76049.1| hypothetical protein TA17430 [Theileria annulata]
Length = 223
Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 53 AFELLEN-------QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG----YKAL 101
+FE+LE G K+F + S++ ++ I + Q C+++G + +
Sbjct: 84 SFEILEYLQDHDELAAGRKLFEDLASTNESRNSEIENIYVGQ-----CVNLGLPEMFPCV 138
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF-LELQRINSTVQFI---PYPIISH-D 156
+ G + + +FH V+++ +D MP F L QR+ +F+ YP+ S
Sbjct: 139 SLSGTMEVTRSRNRTEDFHKVIVLLYDVRMPSMFPLVYQRLGYKCEFMVTYTYPVDSGVG 198
Query: 157 LEENSSIFK--IKILRVL 172
+ EN IF+ +K +RVL
Sbjct: 199 ISENKKIFEDIVKTIRVL 216
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL--TGEPIRIERAFELLEN--QIGE 63
+F+CL+ + S+ + + I + P S ++++ E +R RA ELL
Sbjct: 15 VFMCLVIGV----SYPIIINNLIIDEGPVQSDVIIVPEGQEYVRAYRAAELLHEGFSTSG 70
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+I +S + + + + Q + E KA +T NA E++ F +
Sbjct: 71 QIIVSPIDKATVQGYKEFWVSQEQIIPET------KATSTYENAVITLRMMEEHGFDSAI 124
Query: 124 IVTHDYHMPRTFLELQRINSTVQF 147
IV+ DYHM RT L +RINS F
Sbjct: 125 IVSSDYHMRRTKLIYERINSDYDF 148
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +RQ + I + + T NA+ SA E + + +++VT Y
Sbjct: 106 HSATEADTYLPYL-LRQQVPRADIVLENSSRTTYENARNVSAILEGSRYDSLILVTSAYQ 164
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R F P P+IS+
Sbjct: 165 MPRAMLDFHRFG----FAPQPMISN 185
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI 94
S AI VL G+P R + A EL + I++S G + ++ + Q + +
Sbjct: 28 SPQAIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFSQA-----GVPRSRL 82
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPI 152
+ Y+A +T N + ++ HV +VT DYHM R + + + + F P P+
Sbjct: 83 HLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRALVIANIVFASRGITFEPVPV 142
Query: 153 ISHDLEEN 160
S E+
Sbjct: 143 PSDRASES 150
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECC 93
P AI++L G P R E E + ++++S GV + +I Q DL
Sbjct: 46 PEPQAILMLGGNPNREEFTAEFAKKHDHLEVWVSSGVDRRTATEIFQQA---GVDLGRVH 102
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI---NSTVQFIPY 150
+D Y+A++T N +K + HV ++T D+HM R + + I + + F P
Sbjct: 103 LD--YRAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRA-MAIASIVFGSQGIAFTPV 159
Query: 151 PIISHDLEENSSI 163
PI + S +
Sbjct: 160 PIPTQGYPSESEV 172
>gi|119509608|ref|ZP_01628755.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
gi|119465797|gb|EAW46687.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
Length = 198
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ L CL F + +R + HP AI++L+G+ R + E+ + I
Sbjct: 8 FTLAGCLGMFTIATAIPLRLAIALQQKPHPQ--AILMLSGDSSRPKFTREMAQEFPDLPI 65
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIG------YKALNTEGNAQEASAWAEKNNF 119
++S V + IL DL + G +A +T N A ++NN
Sbjct: 66 WVS-VGDPEIRSIL-------DDLDNQGLQGGDRIQYDNRATDTVTNFTTIVAKVQQNNI 117
Query: 120 HHVLIVTHDYHMPRT 134
HV +VT DYHMPR+
Sbjct: 118 RHVYLVTSDYHMPRS 132
>gi|157826367|ref|YP_001494087.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
gi|157800325|gb|ABV75579.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
Length = 174
Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+G I + Y+ + + + +AI+V G +IE LL+ +FI G+ +
Sbjct: 17 VGGIGYFLYLINSYKFNSNTTNAIIVFAGGGHKIETGIALLKAGYAPILFIIGIESTEQL 76
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL++ R + + I K ++ E N ++A + N V++V ++Y+MP
Sbjct: 77 RNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLASVILVEYNYNMPFMLN 133
Query: 137 ELQR---INSTVQFIPYPI 152
+L++ ++ + + YP+
Sbjct: 134 KLEKEIPSSNNIYIVQYPV 152
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFE 55
+ LFV L+ +++G ++I +V + AI+VL P+ RI +
Sbjct: 17 WRLFVLLVIWLLGVTAWIVWVGERD--QAAKADAIIVLGAAAYDAKPSPVFEERIRHGLD 74
Query: 56 LLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L E + + +G + S+ + ++ ++ + + I I + NT N EA
Sbjct: 75 LYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGIPDDAILIETASRNTVQNLVEAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
E+ + H V+IV+ HM R
Sbjct: 135 RLMEQRDLHRVIIVSDPLHMARAL 158
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 10 VCLIFFIMGFISFIR---YVKQMH-------IPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+CL F + R Y++Q H + PS + + + R++ A L +
Sbjct: 6 ICLFFLFASCYPYHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSRIQKQRMDHAITLYQK 65
Query: 60 QIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+KI ISG V + + +++ I Q++ E I + A NT N + A+ K+
Sbjct: 66 GSIQKILISGAAVANCFIEAEVMKDYAIAQNVPEKDILLEKYAKNTYENLKYAADLCNKH 125
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
+F +IVT +H+ R Q+ + F YP+ +EN F + LR+
Sbjct: 126 HFSKTIIVTSGFHIRRAGFFAQKFLTDFTF--YPVSE---KENQRYFITEYLRM 174
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++R E +I +SG + I+++ + L I + K + T +
Sbjct: 63 RLDRTLECYRAGYFPEIIVSGGIGKEGYDEAIVMRDYLVAHGLPGEHILLDNKGVTTFAS 122
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
A+ A++ NFH V +++ +H+PR L L R T +
Sbjct: 123 ARNTRDIAQQRNFHSVFVISQYFHLPRARLALHRFGFTTVY 163
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 22/157 (14%)
Query: 12 LIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVL------TGEPI--------RIERAFE 55
LI ++GFI + M P+ +A VL G+P R++ A
Sbjct: 3 LILIVIGFIYLLIVAAFMFSGARAKPNGNADTVLVLGARVNGDPAEPSSVLKERLDTAVA 62
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L K+ +SG S S+ ++++ + Q +A I++ K+ TE N + +
Sbjct: 63 YLNENPTLKVIVSGGQGEDESASEASVMEEYLVNQGIARNRINVEDKSTRTEENLKYSKG 122
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
K N +IVT DYHM R + +R +P
Sbjct: 123 ---KFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLP 156
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLE-NQIGEK 64
L VC ++ S +R ++ ++P +P + AIVVL G ++ ++ G++
Sbjct: 48 LLVCSNAWVAK--SLVRSLEWQYLPPNPVPNAEAIVVLGGATKSAYPPRPTVDLSETGDR 105
Query: 65 IFISGVHHSVSKDILL----QKIPIR-------QDLAECCIDIGYKA---------LNTE 104
+ + + +K ++ +I R D+A IG + LNT
Sbjct: 106 VIYAAQLYRQNKAPIIILSGGRIDWRGGGESESADMANVLTSIGIPSEVIVQEPDSLNTY 165
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR--INSTVQFIPYPIISHDLEENSS 162
NA E VL+VT HMPR+ QR IN+ + + +L+E SS
Sbjct: 166 QNAVNVKKILESRGIGKVLLVTSAMHMPRSIQIFQRQGINAIAAPTDFLVSQGELQELSS 225
Query: 163 IFKIKILRVL 172
K IL +L
Sbjct: 226 TPKAAILNLL 235
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 8 LFVCLIFFIMGFISFIRY-VKQMHIPDHPSVS-AIVVL-------TGEPI---RIERAFE 55
L V LIF + I+ + Y + + P S AI+VL T P R+E A +
Sbjct: 7 LVVVLIFALFSIIAILAYQIVSFGFTEKPKKSDAIIVLGCAVYGDTPSPFFKERLEEALK 66
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + G I ISG S+S+ ++ + + +A I + K+ +T N +
Sbjct: 67 LYKEGYGHYIIISGGKGPGESISEAEAGKRYLLEKGVASKNILLDNKSFSTYENLLFSKE 126
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
EKN+ +IV++ +H+ R + +RI F
Sbjct: 127 IMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 34 HPSVSAIVVLT------GEPI--------RIERAFELLENQIGEKIFISG---VHHSVSK 76
PS +A VL GEP R++ A + L ++ +SG S ++
Sbjct: 33 KPSDNAKTVLILGAKVIGEPAQPSHVLQERLDAAVDYLNEHPKARVIVSGGQGTDESETE 92
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++++ + + + ID K+ TE N + EK +IVT DYHM R +
Sbjct: 93 ASVMEEYLVNEGIRRARIDTETKSKRTEENISNSK---EKFQLEKTVIVTSDYHMYRALM 149
Query: 137 ELQRINSTVQFIP 149
+R N +P
Sbjct: 150 LAKRQNIDATGLP 162
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 65 IFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ISG H+ S+ + + I + + E I + ++LNT NA +K+ F+
Sbjct: 122 IIISGGQIPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNK 181
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
++VT +HM R + ++ + V IPYP D + NS
Sbjct: 182 PILVTSAFHMKRAVKQFEK--NEVNVIPYPT---DYQTNS 216
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
N + AS+ H ++VTH YHMPR L Q + + + P+P+
Sbjct: 163 NIKNASSILRSLELKHAVLVTHGYHMPRAHLIAQGLAPEINWHPFPV 209
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 38.1 bits (87), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 120 HPATEADTYLPYL-LREQVPRSDIVLENRSLTTYENARNVSAIVGQSRYDSLILVTSAYH 178
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 179 MPRALLDFRHFG----LEPQPLIS 198
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 33 DHPSVSAIVVLTG----------EP-------IRIERAFELLENQIGEKIFISG--VHHS 73
+ P+ AIVVL G EP RI++A L + Q I +SG + +
Sbjct: 74 NAPTAQAIVVLGGHTANGRQNWFEPYDKATAIARIDKAANLYKAQRAPLIVVSGAALEGN 133
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
VS+ ++ + D+ E I + ++ T NA + + + ++L+VT HMPR
Sbjct: 134 VSEAQIMANALKQHDIPESAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTSALHMPR 193
Query: 134 TF 135
Sbjct: 194 AM 195
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 38.1 bits (87), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R ++A E L+ +F++G + V + +++++ + + E I + K+ NT
Sbjct: 110 RSDKAIEYLKEYPHLNVFLTGGQGIDEKVPESVIMKEYFLENGIDENRIFLEDKSTNTNE 169
Query: 106 NAQ-EASAWAEKN-NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
N + A + + +H++L+VT D+HMPR + + N TV YP+ S
Sbjct: 170 NIKFYIDALKDTDMEYHNILLVTSDFHMPRAGVIARHYNLTV----YPLCS 216
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 8 LFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVLTGEPI-----------RIERAFE 55
L V LIF + I+ + Y + + P S +++ G + R+E A +
Sbjct: 7 LVVVLIFALFSIIAILAYQIISFGFTEKPKKSDAIIVLGCAVYGDAPSPFFKERLEEALK 66
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + G I ISG S+S+ ++ + + +A I + K+ +T N +
Sbjct: 67 LYKEGYGRYIIISGGKGPGESISEAEAGKRYFLEKGVASKNILLDNKSFSTYENLLFSKE 126
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
EKN+ +IV++ +H+ R + +RI F
Sbjct: 127 IMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R+ L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRSELLCQK 159
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ S + + ++++T Y
Sbjct: 143 HRATEADTYLPYL-LRRQVPRADIVLENRSLTTYENARNVSGIVHGSRYDSLILITSAYQ 201
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R T P P+IS+
Sbjct: 202 MPRALLDFHRFGLT----PQPMISN 222
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|59323997|gb|AAW84264.1| heterogeneous nuclear ribonucleoprotein L [Aplysia californica]
Length = 237
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+F + G + I+++K SA++ L G+PI +ERA L N F + +
Sbjct: 49 LFCLYGNVVRIKFLKSKE------GSAMIQL-GDPISVERAIANLNNVF---FFGNKLQL 98
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
S+SK LQ++P +LA+ + YK + N A+KN V H ++
Sbjct: 99 SMSKQAFLQEVPNPHELADGTLS--YKDFMGNRNNRFTNPEAAQKNRIQSPSKVLHFFNA 156
Query: 132 PRTFLE 137
P T E
Sbjct: 157 PPTITE 162
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI 94
S AI VL G+P R + A EL + I++S G + ++ + Q + +
Sbjct: 28 SPQAIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFGQA-----GVPRSRL 82
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Y+A +T N + ++ HV +VT DYHM R +
Sbjct: 83 HLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRALV 124
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+F+ L FI+ +S I + P AI+ L G P R E E + I++
Sbjct: 1 MFLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGGSPEREEFTAEFAKKHPHLDIWV 60
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + Q +++ + + Y A++T N + N+ H+ ++T
Sbjct: 61 SSGIPPKQAQAIFQN----ANISNHRLHLDYLAVDTVTNFTSLVDDFKHNHIQHIYLITS 116
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEEN 160
YH+PR L + + F P PI S E+
Sbjct: 117 AYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRES 151
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +RQ + I + + T NA+ SA E + + ++++T Y
Sbjct: 143 HRATEADTYLPYL-LRQQVPRADIVLENSSRTTYENARNVSAVLEGSRYDSLILITSAYQ 201
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R P P+IS+
Sbjct: 202 MPRAMLDFHRFG----LAPQPMISN 222
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQ-DL 89
D P V+ L P L+ ++G I +SG ++ ++ + + +++ +
Sbjct: 32 DTPDVTGTGTLCSIPANRLLTAVRLQKKLGIPIIVSGGQIYEDSGREADIARRILKELGV 91
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+E I + ++LNT NA+ ++ + + L+VT +HM R + ++ V IP
Sbjct: 92 SEDMILLENRSLNTTQNAEYSTNILKSRKYKQPLLVTSAFHMERAVVNFNKLG--VDVIP 149
Query: 150 YP 151
YP
Sbjct: 150 YP 151
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 34 HPSVSAIVVL------TGEPI--------RIERAFELLENQIGEKIFISG---VHHSVSK 76
PS +A VL TG P R++ A L K+ +SG S ++
Sbjct: 33 KPSENADTVLILGAKVTGTPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATE 92
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++++ + + +A I+ K+ TE N + ++A K N +IVT DYHM R +
Sbjct: 93 ASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALM 149
Query: 137 ELQRINSTVQFIP 149
+R +P
Sbjct: 150 LAKRQGIDASGLP 162
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 65 IFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ISG H+ S+ + I + + E I + ++LNT NA +K+ F+
Sbjct: 122 IIISGGQIPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNK 181
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
++VT +HM R + ++ + V IPYP D + NS
Sbjct: 182 PILVTSAFHMKRAVKQFEK--NEVNVIPYPT---DYQTNS 216
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 120 HAATEADTYLPYL-LREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYH 178
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 179 MPRAMLDFRHFG----LEPQPLIS 198
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRGLMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 64 KIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ +SG H + D L + +RQ + I + + T NA+ S ++++
Sbjct: 132 QVIVSGGNPQRHSATEADTYLPYL-LRQQVPRSDIVLEKSSRTTYENARNVSVIVGQSHY 190
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQ 146
+++VT YHMPR L+ QR Q
Sbjct: 191 DKLILVTSAYHMPRALLDFQRFGVEPQ 217
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 49 RIERAFELLENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ R FELL ++ +SG V D+LL+++ E + G ++ N
Sbjct: 107 RVLRGFELLHEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEG-RSRN 165
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T NA E++ ++ + +L+VT HMPR
Sbjct: 166 TRENAVESARIIQERGWKSLLLVTSAAHMPRA 197
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+V L F ++ + FI K+ S ++ G P R+E+A EL
Sbjct: 10 YVVLCFVLINVLIFITVFKKTQKRQKQSKYDCAIVCGFPANSDGSPSLIMKSRVEKAIEL 69
Query: 57 -LENQIGEKIFISG-VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
N+I IF G VH++ + +++K I L + I KA++T N +
Sbjct: 70 YCHNKIDYIIFSGGKVHNTYEEAAIMEKYAISLGLDKKIIIKENKAISTFHNLLYCTEIM 129
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
++NF+ L+VT+ +H+ +
Sbjct: 130 NEHNFNSCLVVTNGWHLRKA 149
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 64 KIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ +SG H + D L + +RQ +A I + + T NA+ SA ++++
Sbjct: 82 QVIVSGGNPQRHSATEADTYLPYL-LRQQVARSDIVLEKTSRTTYENARNVSAIVGQSHY 140
Query: 120 HHVLIVTHDYHMPRTFLELQ 139
+++VT YHMPR L+ Q
Sbjct: 141 DTLILVTSAYHMPRALLDFQ 160
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLGLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHI---------PDHPSVSAIVVLTGEP----- 47
R F F L+ MG+ S++ V+Q+++ D +V +G P
Sbjct: 23 RRFLLWCFCFLVLAAMGWSSWV--VRQINLVAAQDQAQPADAIAVFGAAEYSGRPSPVYH 80
Query: 48 IRIERAFELLENQIGEKIFISG---------VHHSVSKDILL-QKIPIRQDLAECCIDIG 97
R++ A L QI + G V +D LL IP + +AE
Sbjct: 81 ARLDHAVTLYRKQIAPIVITFGGGSDKDSGKTEGGVGRDYLLANGIPFDKIIAET----- 135
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+++TE + + AE+NN H+++V+ + H+ R +R V P P + H
Sbjct: 136 -HSVDTEQQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVYTSPRPALGH 192
>gi|307592076|ref|YP_003899667.1| hypothetical protein Cyan7822_5740 [Cyanothece sp. PCC 7822]
gi|306985721|gb|ADN17601.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 205
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDIL-LQKIPIRQDLAEC 92
P A +L G+ R E EL + +I++S G + +K++ + +P R
Sbjct: 40 PQPQAFFILGGDFRREEVVAELAKWYPSLEIWVSSGPNTQKTKELFQMAGVPPR------ 93
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I +A++T N A +K + H+ +VT DYHMPR
Sbjct: 94 LLHIDARAIDTVTNFTSLVADFKKKHIQHLYLVTSDYHMPRA 135
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L + G+ I +SG ++S+ +QK +++ L + I K+ NT
Sbjct: 65 RLDEGLRLYNDGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 106 HPASEADTYLPYL-LREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYH 164
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 165 MPRALLDFRHFG----LDPQPLIS 184
>gi|83309135|ref|YP_419399.1| hypothetical protein amb0036 [Magnetospirillum magneticum AMB-1]
gi|82943976|dbj|BAE48840.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 526
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA 90
+++A V L G + RA E+LE++IG ++ G H+ S Q + +DLA
Sbjct: 192 AIAAAVCLPGHRAGLARALEVLEHEIGRQVLPDGCHYERSPSYHFQVLGDLEDLA 246
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R + L + G+ I +SG S+S+ +++ + + + I + K+ +T
Sbjct: 60 RTDEGLRLFKEGYGKYIIVSGGKGQGESISEAEAMKRYLVSKGVDSSKIILEDKSASTMA 119
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + EK NF +IV++ YH+ R L
Sbjct: 120 NLINSKSIMEKKNFKTAIIVSNKYHLKRASL 150
>gi|223939730|ref|ZP_03631602.1| protein of unknown function DUF218 [bacterium Ellin514]
gi|223891601|gb|EEF58090.1| protein of unknown function DUF218 [bacterium Ellin514]
Length = 343
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ A +L + + +K+ SG SV + + ++ ++ + I LNT+
Sbjct: 207 RVRTACQLYRDGLVKKLIFSGGPGDGSVHETESMTRMAVQLGVKPQDILTDRAGLNTQAT 266
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ N H+L+V+H YH+PR + +R V +P
Sbjct: 267 VNNTERLFSQINARHILVVSHFYHLPRIKMAYRRDGWDVYTVP 309
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAE 91
P+V ++V+ R++ A L K+ +SG S ++ ++++ + + +A
Sbjct: 52 PAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIAR 107
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ K+ TE N + ++A K N +IVT DYHM R + +R +P
Sbjct: 108 KRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAE 91
P+V ++V+ R++ A L K+ +SG S ++ ++++ + + +A
Sbjct: 52 PAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIAR 107
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ K+ TE N + ++A K N +IVT DYHM R + +R +P
Sbjct: 108 KRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ + + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 16 IMGFISFIRYVKQMHIPDH--PSVS----AIVVLTGEPIRIERAFELLENQIGEKIFISG 69
I G + ++ + H+ D P S A ++ E IR+ R + G K+ +SG
Sbjct: 75 IEGTVDYVMVLGNGHVVDDSIPPTSELTRAALMRLSEGIRVMRMYP------GAKLILSG 128
Query: 70 VHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+S +L K+ + +A+ I + A +T A++A+A+ ++ ++VT
Sbjct: 129 YAGGSEMSHARMLAKVALALGVAKSDIILLETAQDTWEEARQAAAFVQQRTL---VLVTS 185
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
HMPR E Q T IP P
Sbjct: 186 ASHMPRAMNEFQSAGLTP--IPAP 207
>gi|119188591|ref|XP_001244902.1| hypothetical protein CIMG_04343 [Coccidioides immitis RS]
Length = 1264
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M I A V G+ PI +ER +++ +G +
Sbjct: 1100 FFVLGLISTSRHGLEMLI--EAGWDAPVDYKGQSLGSCMPINLERMYKISFGPVGSNSKV 1157
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA-------WAEKNNFH 120
+G + K + PI Q + +D+G L+ A S + + F
Sbjct: 1158 NGTANQRYKSAVTDSDPINQKILNLLVDMGNTVLSKRAAADLQSIKTKHPDHFRQTQLFR 1217
Query: 121 HVLIV--THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ L++ +H + +P L + +V + ++ DLE +S
Sbjct: 1218 NTLVILESHHFRLPARRFALDLFDKSV--MGRIVLEDDLELDS 1258
>gi|258575787|ref|XP_002542075.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902341|gb|EEP76742.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1247
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M + A V G+ P+ +ER +++ N +G K
Sbjct: 1083 FFVLGLISASRHGLEMLV--EAGWDAPVDYKGQSLGSCMPVNLERIYKIPFNSVGPKAET 1140
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA-------QEASAWAEKNNFH 120
+GV + + PI Q + D+G L A + + + F
Sbjct: 1141 NGVSDERYRSAVTDSDPINQKILNLLADMGNTVLTKRAAADLQRIKLKHPDNFRQTQLFR 1200
Query: 121 HVLIV--THDYHMPRTFLELQRINSTV 145
+ LI+ +H + +P L + +V
Sbjct: 1201 NTLIILESHHFRLPARRFALDLFDKSV 1227
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVV---LTGEPI------RIERAFELLENQIG 62
+I +G S I Y + MH +AI++ L G I R+ER + E
Sbjct: 82 IIILFLGLQSCILY-QGMHTDKQQGEAAIILGAQLHGSSISRLLRYRLERGIQFAEEYPN 140
Query: 63 EKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ +SG + S+ +++ I+ +AE I + ++NT+ N + EK +
Sbjct: 141 TYLIVSGGKGQAETCSEASAMKQYLIQHGVAESRILMEDASMNTQENLAFSKVLMEKYHI 200
Query: 120 HHVLIVTHDYHMPRT 134
I+T+D+HM R
Sbjct: 201 KSASIITNDFHMFRA 215
>gi|262376749|ref|ZP_06069977.1| flavoprotein [Acinetobacter lwoffii SH145]
gi|262308459|gb|EEY89594.1| flavoprotein [Acinetobacter lwoffii SH145]
Length = 400
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT--EGNAQEASAWAEKNNFHHVLIV 125
SG+ + ++K P R L G+K + T GNA EA+ E N+F L+
Sbjct: 175 SGIGYEIAKQFGHHVYPTRAGLVPFTFSDGFKEVTTRLSGNAVEATLSNELNSFTEALLF 234
Query: 126 THDYHMPRTFLELQRI-----NSTVQFIPYPIISHDLEENSSIFKIK-------ILRVLL 173
TH + L+L + V F+P S DL + FK K +LR LL
Sbjct: 235 THRGLSGPSSLQLSNYWNVGQSFKVDFLP----SVDLLD---FFKSKKQSQPKVLLRTLL 287
Query: 174 IEYL-KILLLSIQLSLSTQTA 193
EYL K ++ +Q + T++A
Sbjct: 288 NEYLPKSVVAELQSIIWTESA 308
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+A+NT NA+ A+A + +VTH +HMPR + + +P P D
Sbjct: 156 RAMNTHENARNAAAILSAEGIERIYLVTHAWHMPRALRSFE--AEGLDVVPAPTGFRD 211
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFELLENQIG 62
IFF+ ++FI +VK P S IVVL P+ RI++A +L +
Sbjct: 150 IFFVTNILNFIHFVK-------PRYSYIVVLGAGLNGTEVTPLLASRIDKAIKLWRRRPQ 202
Query: 63 EKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ I G +S+ ++ +RQ + + I + ++ NT N + EK
Sbjct: 203 DVTLIMSGGQGPDEVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFSYKLMEKGR 262
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+IVT+ YH+ R+ + +R+ Q
Sbjct: 263 -EDFVIVTNYYHLLRSLILARRLGLKCQ 289
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 30/170 (17%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTG-----EPIRIERAFELLENQIGEK-IFISGVHH 72
+S RY I D+P V AIVV+ G +P R R F + G++ I + ++H
Sbjct: 1 MVSLERYHPSQDITDYPMVQAIVVIGGCLESAKPPR--RTFNV--GDAGDRVIHAARLYH 56
Query: 73 SVSKDILL--------QKIPIRQDLAECCID---IGYKALNTEG-------NAQEASAWA 114
+ ++L +K+P D ++ + KA+ +E NA +
Sbjct: 57 AGKAPLILVSGGTLPWRKVPPEADAMRAFLEELGVPTKAVMSEPDSITTYENALFSKKLL 116
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ H +L+VT +HM R+ +++ + IP P ++ S+F
Sbjct: 117 DNKGIHKILLVTSAFHMRRSAAVFRKVG--FEVIPAPTDFRVVKNPPSLF 164
>gi|221115165|ref|XP_002163743.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
Length = 1322
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 61 IGEKIFISGVHHSVSKDILLQKIPI----RQDLAECCID--IGYKALNTEGNAQ----EA 110
IG K+FI H S D L+K+ R+D C + K+++ E NAQ ++
Sbjct: 729 IGCKVFICDFHREQSWDRWLKKLSSGCSNRKDDILCILRRLAWSKSIDEEENAQRILEQS 788
Query: 111 SAWAEKN--NFHHVL--IVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFK 165
W++++ F + ++ M + R + S + P+ + H L + S++
Sbjct: 789 EFWSQESFTKFKQYIENYTDSNFKMDARYRRYARWVPSYLYNRPHSFVKHCLIKKSNVEN 848
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEITV 206
+ + V++I++ +LS ST+ A+++F++ +EIT+
Sbjct: 849 LDLSGVIMIKHGVFAVLS-----STKPATKYFVSFGDEITM 884
>gi|303323717|ref|XP_003071850.1| Hr1 repeat family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111552|gb|EER29705.1| Hr1 repeat family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320031794|gb|EFW13752.1| sterility protein Ste20 [Coccidioides posadasii str. Silveira]
Length = 1309
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M I A V G+ PI +ER +++ +G +
Sbjct: 1145 FFVLGLISTSRHGLEMLI--EAGWDAPVDYKGQSLGSCMPINLERMYKISFGPVGSNSRL 1202
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA-------WAEKNNFH 120
G + K + PI Q + +D+G L+ A S + + F
Sbjct: 1203 HGTANQRYKSAVTDSDPINQKILNLLVDMGNTVLSKRAAADLQSIKTKHPDHFRQTQLFR 1262
Query: 121 HVLIV--THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ L++ +H + +P L + +V + ++ DLE +S
Sbjct: 1263 NTLVILESHHFRLPARRFALDLFDKSV--MGRIVLEDDLELDS 1303
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 1 MRYFWYGLFVCL--IFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTG-------EPI 48
+RY YG + + IF + + ++ Y +P H A VVL P+
Sbjct: 7 LRYLRYGFLLSILSIFALQAWCAWQVYQYAHAPAALPKH--ADAAVVLGAAAWGDKPSPV 64
Query: 49 ---RIERAFELLENQIGEK-IFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ EK IF G S+ + +K ++Q + I ++ +
Sbjct: 65 FRERINHAIALYQSERVEKLIFTGGTRKEGYPSEGEVARKFALKQGIPSHDIIYETRSKD 124
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N +K+ HHV+IV+ YHM R
Sbjct: 125 TYQNLVNTRLLMQKHKLHHVIIVSDPYHMARA 156
Searching..................................................done
Results from round 2
>gi|254780579|ref|YP_003064992.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040256|gb|ACT57052.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ
Sbjct: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH
Sbjct: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL
Sbjct: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
LLSIQLSLSTQTASQFFITLIEEITVK
Sbjct: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 109/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIG+ A++T GNA+E S W +
Sbjct: 92 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPRT EL ++ ++FIPYP+++ DL+ + +RV+L EYLK+L
Sbjct: 152 SVLVVTNNYHMPRTLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYLKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LAGAR 216
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 107/183 (58%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 96 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 108/183 (59%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 14 WGGFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 74 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY+K+LL
Sbjct: 134 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYVKVLLA 193
Query: 183 SIQ 185
+
Sbjct: 194 GAR 196
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 106/183 (57%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 96 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 108/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ + + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 34 LRWGGFACLLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKG 93
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIGY A++T GNA+EAS W +
Sbjct: 94 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHTKGYR 153
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K+L
Sbjct: 154 SVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVKVL 213
Query: 181 LLSIQ 185
L +
Sbjct: 214 LTGAR 218
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 107/183 (58%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+ +G
Sbjct: 34 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGVG 93
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 94 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 153
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 154 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 213
Query: 183 SIQ 185
+
Sbjct: 214 GAR 216
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 107/185 (57%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ + + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISG H + + + + DL CC+DIGY A++T GNA+EAS W +
Sbjct: 92 AGKRLLISGAHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K+L
Sbjct: 152 SVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LTGAR 216
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 66/170 (38%), Positives = 101/170 (59%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
GF+ F V + P P AIVVLTG RI++A ELL+ G+++ ISGVH + +
Sbjct: 2 FGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAGKRLLISGVHPTTT 61
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + DL CC+DIG+ A++T GNA+E S W + VL+VT++YHMPR+
Sbjct: 62 PAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSL 121
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL +
Sbjct: 122 AELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLTGAR 171
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 104/185 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+RY Y + + + + GF+ F V M P P AIVVLTG RI++A +LL
Sbjct: 38 LRYGGYAILLLMACLVAGFLHFADDVTAMMPPAEPKADAIVVLTGGYQRIDQAVDLLRKG 97
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGVH S S + + DL CC+D+GY+A++T GNA E + W F
Sbjct: 98 SGRRLLISGVHPSTSPATIRKMTQASPDLFACCVDMGYRAIDTIGNANETAQWIHDKGFS 157
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT +YHM R+ +EL+R + QFIPYP+++ DL + LR L+ EY KIL
Sbjct: 158 SVLVVTSNYHMRRSLMELRRTDHETQFIPYPVVTADLRTRAWYADPNALRTLMSEYAKIL 217
Query: 181 LLSIQ 185
+ +
Sbjct: 218 IAYTR 222
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 117/207 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L F+ GF+ F V + P P AIVVLTG RIE+A ELL++
Sbjct: 35 LRRGFFVLLAFLAVFVAGFLYFADTVASLQPPAAPKADAIVVLTGGFQRIEQAVELLKSG 94
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ + + + + DL +CC+DIG++A++T GNA EA W + +
Sbjct: 95 AGNRLLISGVNPATTGSQIRRNTQSSADLFKCCVDIGHEAVDTIGNATEAGQWIHDHGYR 154
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPR+ LEL+R+ +FI YP+++ DL+ ++ + + ++ +L+EY K
Sbjct: 155 SVLVVTNNYHMPRSLLELRRVRPDTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAKYS 214
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
+ ++ + A I K
Sbjct: 215 IAFLRDFANAHLADSSRTDTAPPIQAK 241
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IGFVGAAVGFVGFLSQLRGVETKPASNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDNQRLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL + IP+ +I E LR+LL EY K L +++ L+
Sbjct: 154 HMPRAIVELSYAMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVRVRLA 213
Query: 190 TQTASQFFITLIEEI 204
+ L EI
Sbjct: 214 -----YLGLELAPEI 223
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 93/185 (50%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF + F+ GF F ++ IVVLTG R+ A +LL G+++
Sbjct: 26 RFLFSFFVIFLAGFAWFASQLRSEESKPDRHADGIVVLTGGASRVADALDLLSKGYGKRL 85
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + +L+ P Q L +CC+D+ A+NT NA E W ++ FH +++V
Sbjct: 86 LISGVHPANGAADILRAQPESQALLKCCVDLDRSAVNTRSNATETRRWVKERGFHSLIVV 145
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR +EL + I YP++S +R++ +EY+K L+ ++
Sbjct: 146 TSNYHMPRATVELTHAMPDIDLIFYPVVSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVR 205
Query: 186 LSLST 190
+ L+
Sbjct: 206 VRLAA 210
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ I + IVVLTG R+ A ELL G ++ I
Sbjct: 31 LAIGFVGMASGFVVFLSQLRGAEIQPGRNADGIVVLTGGSSRVSDAIELLAAGYGRRLLI 90
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P Q L CC+D+ A+NT NA EA WA + FH +++VT
Sbjct: 91 SGVHPTNGANDISRSLPDSQQLLSCCVDLDRSAINTRSNAAEARRWAHERGFHSLIVVTS 150
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ ++ IP+ ++ ++ R+LL EY K + ++
Sbjct: 151 NYHMPRAIVEMSHAMPDIELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAAEARVR 210
Query: 188 LSTQTASQFFITLIEE 203
L+ F L+ +
Sbjct: 211 LA-----GFGAELMPD 221
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 100/183 (54%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + GF+ F + + P P AI+VLTG RI++A ELL G
Sbjct: 37 WGGFAFVFLVAIVFGGFLHFADSITTLKPPLEPKADAIIVLTGGYQRIDQAVELLRTGAG 96
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISG H + + + + +L CC+DIGY A++T GNA+EA+ W + +
Sbjct: 97 NRLLISGAHPTTTPSQIRKLTQSPANLFNCCVDIGYDAIDTIGNAREAAKWIHARGYKSI 156
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL+ ++ FIPYP+++ DL+ + LR ++ EY K+LL
Sbjct: 157 LVVTNNYHMPRSLAELKYVDPATDFIPYPVVNSDLKTKNWFTDPNALRTMIYEYAKVLLA 216
Query: 183 SIQ 185
+
Sbjct: 217 GAR 219
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IAFVGAGVGFVGFLSQLRGVETKPVNNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQQLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAAEARVRLA 213
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LFV L+ F++GF++F V M P AI+VLTG RI+ A +LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPADAIIVLTGGQSRIQAAVDLLKDKRGKRLL 164
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH + ++ L + Q L +CC+D+ ALNT GNA E+ W NN+ V++VT
Sbjct: 165 ISGVHPATNEKALQRATHADQSLFDCCVDLDRSALNTIGNATESERWIRTNNYRRVILVT 224
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ D E+S + + LRVL IEY+K L ++++
Sbjct: 225 NNYHIPRSTLEMSYRMKDVEFIPYPVVNGDRREHSWVSEGDTLRVLFIEYVKYLGAAVRV 284
Query: 187 S----LSTQTASQ 195
TQT
Sbjct: 285 GTTELFGTQTNQS 297
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A +LL G+++ ISG
Sbjct: 34 IAFVGAAVGFVGFLSQLRGVETKPAANADGIVVLTGGSSRISDAVDLLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W + F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQRLLTCCVDLDRSAVNTRSNASETRRWVDGQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPDVTLIPFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAAEARVRLA 213
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 112/185 (60%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRSFFVLLAFLAVFIAGFLQFADTVASLQPPPTPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG +A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGREAVDTIGNATETSHWIRSRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +F+ YP+++ DL+ + + +L+ +L+EY+K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYVKYS 204
Query: 181 LLSIQ 185
+ S++
Sbjct: 205 VSSLR 209
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LFV L+ F++GF++F V M P AI+VLTG RI+ A LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPADAIIVLTGGQSRIQAAVNLLKDKRGKRLL 164
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S ++ +L + Q L +CC+D+ ALNT GNA E+ W NN+ V++VT
Sbjct: 165 ISGVHPSTNEKVLQRATHADQSLFDCCVDLDRSALNTIGNAAESERWIRTNNYRRVILVT 224
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ + V+F+PYP+++ + E+S + + LRVL IEY+K L +++
Sbjct: 225 NNYHIPRSTLEMSYLMKDVEFVPYPVVNGERREHSWVAEGDTLRVLFIEYVKYLGAVVRV 284
Query: 187 S----LSTQTASQFFIT 199
TQ
Sbjct: 285 GASELFGTQPQQSATAA 301
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ + IVVLTG R+ A ELL G+++ I
Sbjct: 46 LALGFLVGAGGFVVFLSQLRGAEQKPRHNADGIVVLTGGSSRVSDAVELLAAGYGKRLLI 105
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D CC+D+ A++T NA E W ++ F +++VT
Sbjct: 106 SGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVVTS 165
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 166 NYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 225
Query: 188 LSTQTASQFFITLIEE 203
L S+ I ++ E
Sbjct: 226 L-----SKLGIEVMPE 236
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ + IVVLTG R+ A ELL G+++ I
Sbjct: 32 LALGFLVGAGGFVVFLSQLRGAEQKPRHNADGIVVLTGGSSRVSDAVELLAAGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D CC+D+ A++T NA E W ++ F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LSTQTASQFFITLIEE 203
L S+ I ++ E
Sbjct: 212 L-----SKLGIEVMPE 222
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R L + + F GF F V + P +P AI+VLTG R++ A +LL +
Sbjct: 35 LRISALSLLILAVLFAGGFGWFANKVAHLTTPANPEKADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPD 230
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ + + + IVVLTG R+ A ELL G ++ I
Sbjct: 32 LALGFVAVAGGFVAFLAQLHSAELQPRRNAEGIVVLTGGSSRVSDAVELLAAGYGRRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P D CC+D+ A++T NA E W + F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESSDWFSCCVDLDRSAVDTRSNAAETRRWVRERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSDAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LSTQTASQFFITLIEE 203
L S+ I L+ E
Sbjct: 212 L-----SKLGIELMPE 222
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ ++ + + + IVVLTG R+ A ELL + G+++ I
Sbjct: 32 LALGFVATAAGFVAFLAQLRGAELKPNRTADGIVVLTGGSSRVSDAVELLASGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D +CC+D+ A+NT NA E WA + FH +++VT
Sbjct: 92 SGVHRTNGASDISRSVPDSKDWLDCCVDLDRSAVNTRSNAAETRRWAHERGFHSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ V+ IP+ +I + LR+LL EY K + + ++
Sbjct: 152 NYHMPRAIVEMSHAMPDVELIPFAVIGDKWRDEPWWTSGATLRLLLSEYAKYVAVEARVR 211
Query: 188 LSTQTASQFFITLIEEIT 205
L+ + I L E +
Sbjct: 212 LA-----RLGIELAPEAS 224
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 113/191 (59%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRGFFVLLAFLTVFIAGFLQFADTVASLQPPATPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG+ A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGHAAIDTIGNATETSLWIRNRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +FI YP+++ DL+ + + +L+ +L+EY K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFIAYPVVNSDLKTTNWLRNPLVLKAILLEYGKYS 204
Query: 181 LLSIQLSLSTQ 191
+ +++ + +
Sbjct: 205 VATLRDVMGAR 215
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 107/185 (57%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + L F GF+ F V M P+ AI+VLTG RIE+A LL +
Sbjct: 31 IRGLILLCVITLGAFSGGFLWFADSVASMRPPEGAKGDAIIVLTGGYQRIEQAVGLLRDG 90
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+G+++ ISGV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W + +
Sbjct: 91 VGKRLLISGVNPATTRTQIRKMTQGSSDMFSCCVDMGYKAIDTIGNANEAASWIRDHGYS 150
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT++YHM R+ EL + QFI YP+IS DL + + ++R +L EY+K +
Sbjct: 151 SIVVVTNNYHMHRSLHELHNASPQTQFIAYPVISADLARTNWFAEPDVVRTMLYEYMKFV 210
Query: 181 LLSIQ 185
+ + +
Sbjct: 211 IAAGR 215
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ +I F+ GF F + I IVVLTG R+ A +LL G+++
Sbjct: 26 RFVVSFVIIFLAGFAWFAGQLHSEEIKPERHADGIVVLTGGASRVADALDLLSRGYGKRL 85
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + +L+ P R+ L CC+D+ A+NT NA E W ++ F +++V
Sbjct: 86 LISGVHPANGTADILRAQPERETLLSCCVDLDRSAVNTRSNATETRRWVKERGFRSLIVV 145
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR +EL + I YP++S +R++ +EY+K L ++
Sbjct: 146 TSNYHMPRASVELSHAMPDIDLIFYPVVSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVR 205
Query: 186 LSLSTQTASQFFITLIEE 203
+ L+ F + E
Sbjct: 206 VRLAA------FGIVFPE 217
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +GFI F+ ++ I IVVLTG R+ A ELL G ++ I
Sbjct: 13 LAIGFFVAAVGFIGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLI 72
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 73 SGVHPTNEASDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLIVVTS 132
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 133 NYHMPRAIVELSHAMPSLDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
Query: 188 LSTQTASQFFITLIEEITV 206
L+ + L E+ +
Sbjct: 193 LA-----DLGLDLAPEVDL 206
>gi|218531041|ref|YP_002421857.1| hypothetical protein Mchl_3091 [Methylobacterium chloromethanicum
CM4]
gi|218523344|gb|ACK83929.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 234
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F V L+ GF++F+ V++ P V IV +TG R+ A +LL
Sbjct: 15 LRAFVGLSLVGLLALAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEG 74
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F
Sbjct: 75 HGRRLLISGVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFG 134
Query: 121 HVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT +EL+ IPYP++S L+ + + R+L EYLK
Sbjct: 135 TVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKF 194
Query: 180 LLLSIQLSLSTQTASQFFITLI 201
L+ + + F LI
Sbjct: 195 LVAWGRTRFESDPEQSRFAVLI 216
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R + + F GF F V + P +P AI+VLTG R++ A +LL +
Sbjct: 35 LRLSALSVLILATLFAGGFGWFANKVSHLTTPANPARADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYNKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPN 230
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +GF+ F+ ++ I IVVLTG R+ A ELL G ++ I
Sbjct: 13 LGLGFFIAAVGFVGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLI 72
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 73 SGVHPTNDANDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLVVVTS 132
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 133 NYHMPRAIAELSHAMPSMDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
Query: 188 LSTQTASQFFITLIEE 203
L+ + L E
Sbjct: 193 LA-----DLGLDLAPE 203
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 103/189 (54%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ F+ GF+ F + IVVLTG RI +LL + G+++ ISGV
Sbjct: 43 LALLFVGGFVVFTTAIAPREPAGLKPADGIVVLTGGASRIADGVQLLASGHGQRLLISGV 102
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ + S+D + + +P + L +CC+D+G++ALNT GNA EA+ W F +++VT +H
Sbjct: 103 NRATSQDEIRRTLPDNEHLLDCCVDLGHRALNTFGNAIEAAEWTRAQGFRSLVVVTSAWH 162
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
MPR +EL R V+ + YP+++ ++ + +++LL EYLK ++ ++ +
Sbjct: 163 MPRALVELGRALPEVELVAYPVVTDRMQSGGWWTDPQTVKLLLKEYLKYMMAMAKIRPAQ 222
Query: 191 QTASQFFIT 199
A + ++
Sbjct: 223 AVAPKATVS 231
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L +++
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRV 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 5 WYGLFVCL--------IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
W L + L + F +GF++F+ + + H IV LTG RI A +L
Sbjct: 25 WRRLVLTLAALVGASGLAFGVGFLAFVGCLARTERQPHAPADGIVALTGGAQRIGDAIDL 84
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
L G ++ I+GV+ S++ + + P +Q L CC+D+ Y+A NT GNA E W +
Sbjct: 85 LAAGYGRRLLITGVNERTSREEIARLNPGQQHLIACCVDLDYRARNTIGNAIETRRWMRE 144
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N F V +VT +YHMPRT LEL + + +P+P++ + ++ R+L+ E
Sbjct: 145 NGFRTVAVVTSNYHMPRTLLELGHALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVSE 204
Query: 176 YLKILLLSIQLSLSTQTASQFFITLI 201
Y+K L+ I+ T L+
Sbjct: 205 YVKFLVAWIRTRFETDPEDSRAAVLM 230
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 11 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 70
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 71 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 130
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 131 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 190
Query: 187 SLST 190
++
Sbjct: 191 GSAS 194
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R L V F GF F V + P +P AI+VLTG R++ A ELL +
Sbjct: 35 IRISALSLLVLATLFAGGFGWFANKVSHLTTPANPTKADAIIVLTGGQSRLDAAMELLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L + L CC+DI AL+T GNA++++ W + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKKLFSCCVDIDRAALDTIGNAEQSAKWVTNHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGARLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPD 230
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 103 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 162
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 163 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 222
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 223 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 282
Query: 187 SLST 190
++
Sbjct: 283 GSAS 286
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 1/200 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R G + + F ++GF F + ++ P V AIVVLTG RIE+A LLE+
Sbjct: 9 LRILTIGAILGVTFVVIGFFRFTDEIAELKAPGTSVDVDAIVVLTGGYQRIEQALALLED 68
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
IG+++ ISGV+ S S L + + +CC+DIGY+AL+T GNA E + W +NN+
Sbjct: 69 GIGDRLLISGVNPSTSSAALRRATGTQSATFDCCVDIGYQALDTIGNANETADWIRQNNY 128
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
VL+VT++YHMPR+ +EL + + V F+ YP+ DL+ + + LR L EY K
Sbjct: 129 VRVLVVTNNYHMPRSLMELSQASPDVSFVAYPVTHADLKTEAWLTDPVALRTLFTEYAKY 188
Query: 180 LLLSIQLSLSTQTASQFFIT 199
L ++ TA+
Sbjct: 189 SLARLRNWSGATTATGLRAD 208
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L +++
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRV 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 64/177 (36%), Positives = 106/177 (59%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L F GF+ F V M P+ AI+VLTG RIE+A LL + +G+++ IS
Sbjct: 39 VIALGAFSGGFLWFADSVASMRPPEGARGDAIIVLTGGYQRIEQAVGLLRDGVGKRLLIS 98
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W +N+ +++VT++
Sbjct: 99 GVNPATTRSQIRKMTQGSSDMFTCCVDMGYKAIDTIGNANEAASWIRDHNYSSIVVVTNN 158
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
YHM R+ EL+ + +FI YP+IS DL + + ++R LL EYLK + + +
Sbjct: 159 YHMHRSLHELRNASPQTEFIAYPVISADLVRTNWFVEPDVVRTLLYEYLKFVAAAGR 215
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 112/191 (58%), Gaps = 6/191 (3%)
Query: 2 RYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
RYF + L + ++FF GF+ F +Q+ P P AI+VLTG RIE +LL
Sbjct: 42 RYFPPTAFFLLMIVLFFCAGFVVFSEKTEQLTPPSPLPKADAIIVLTGGENRIETGLDLL 101
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +G ++ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+
Sbjct: 102 QQGLGSRLLISGVNTTTTLKRFMHSTHITPQLFACCVDIGHKAINTKGNAEESAVWIKKH 161
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ V IVTHDYHM R+ EL+ + + FI YP+ + S + ++ +R+L +Y+
Sbjct: 162 HYKTVYIVTHDYHMWRSMRELKYLMPDINFIAYPVKKSG--DESIVQQLNQIRILAFQYI 219
Query: 178 KILLLSIQLSL 188
K + + I+ +
Sbjct: 220 KTIDVYIRTAF 230
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 116
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 117 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 176
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 177 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 236
Query: 187 SLST 190
++
Sbjct: 237 GSAS 240
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
I+F+ ++ I IVVLTG R+ A ELL G ++ ISGVH + + +
Sbjct: 37 IAFLSQLRGAEIAPDRKADGIVVLTGGSSRVSDAMELLAAGYGRRLLISGVHPTSTASDI 96
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +P Q CC+D+ AL+T GNA EA WA+ F +++VT +YHMPR +E
Sbjct: 97 SRTLPENQSFMTCCVDLDRTALSTRGNAAEARRWAQARRFKSLIVVTSNYHMPRALVEFS 156
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
IP+ ++ E LR+LL EY+K + +++ L F I
Sbjct: 157 HAMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEVRVRL-----EDFGID 211
Query: 200 LIEEIT 205
L E++
Sbjct: 212 LSPEVS 217
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKERRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|163852283|ref|YP_001640326.1| hypothetical protein Mext_2865 [Methylobacterium extorquens PA1]
gi|163663888|gb|ABY31255.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 283
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ +
Sbjct: 79 AGGFLAFVAVVERTDRPSLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTT 138
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+D +++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT
Sbjct: 139 RDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTL 198
Query: 136 LELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+EL+ IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 199 VELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQ 258
Query: 195 QFFITLI 201
F LI
Sbjct: 259 SRFAVLI 265
>gi|240139618|ref|YP_002964094.1| hypothetical protein MexAM1_META1p3069 [Methylobacterium extorquens
AM1]
gi|240009591|gb|ACS40817.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 234
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F V L+ GF++F+ V++ P V IV +TG R+ A +LL
Sbjct: 15 LRAFVGLSLVGLLVLAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEG 74
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F
Sbjct: 75 HGRRLLISGVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFG 134
Query: 121 HVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT +EL+ IPYP++S L+ + + R+L EYLK
Sbjct: 135 TVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKF 194
Query: 180 LLLSIQLSLSTQTASQFFITLI 201
L+ + + F LI
Sbjct: 195 LVAWGRTRFESDPEQSRFAVLI 216
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 72 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 131
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++VT
Sbjct: 132 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVT 191
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 192 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 251
Query: 187 SLST 190
++
Sbjct: 252 GSAS 255
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 2 RYFWYGL-------FVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERA 53
R W G+ F+ + ++ GF F +V ++ P IVVLTG RI+
Sbjct: 5 RRMWVGVRSAAATIFLFFVLYVAGFGIFADHVVRLRAPAELNPADGIVVLTGGQSRIDTG 64
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+LL+ +++ ISGV+ D L + L CC+DI ALNT GNAQE++ W
Sbjct: 65 MDLLKAGKAKRLLISGVNPVARVDDLRLATGGDRALFNCCVDIDRAALNTVGNAQESAKW 124
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
N + +++VT++YHMPR+ LE++RI PYP+++ L++ + I LRVLL
Sbjct: 125 VSANTYGSIIVVTNNYHMPRSLLEMRRILPNADLQPYPVVNTPLDDGAWISNPDALRVLL 184
Query: 174 IEYLKILLLSIQLSLSTQTASQFFI 198
IEY K + + +
Sbjct: 185 IEYTKYIAALARGLFPAEKGETLSA 209
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 116
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++VT
Sbjct: 117 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVT 176
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 177 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 236
Query: 187 SLST 190
++
Sbjct: 237 GSAS 240
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L + + FF GF+ F +Q+ P+ P AI+VLTG RIE LL+ ++G +
Sbjct: 49 LFLLMIVFFFCAGFVIFSEKTEQLKPPNPLPKADAIIVLTGGEKRIETGLNLLQQELGSR 108
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+++ V I
Sbjct: 109 LLISGVNTTTNLKRFMYSTHITPQLFTCCVDIGHKAINTKGNAEESADWIKKHHYQTVYI 168
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VTHDYHM R+ EL+ + + FI YP+ ++ S+I +I +R+L+ +Y+K L + I
Sbjct: 169 VTHDYHMWRSLRELKYLMPDINFIAYPVKKSEI--ESTIQQINQIRILVFQYIKTLEVYI 226
Query: 185 QLSL 188
+ +
Sbjct: 227 RTAF 230
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R+F+ +C + F GF+ F+ + + IVVLTG RI ++ +LLE
Sbjct: 41 VRFFFLLFLICSVAFAAGFLWFVEVLQPAVQAVVPKHADGIVVLTGGRDRISQSLDLLET 100
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+++ ISGVH S S + + R L +CC+D+ KALNT GNA+E ++W KN F
Sbjct: 101 GSAKRLLISGVHPSTSAKQIARLNSKRMWLFDCCVDLDRKALNTIGNAEETASWVRKNQF 160
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ +L+VT YHMPR ELQ P P+ +L+ I ++LL EY+K
Sbjct: 161 NSLLVVTSAYHMPRALAELQVRLPEADLYPSPVYHKELDLEHWYESSSITKLLLREYVKY 220
Query: 180 LLLSIQLSLST 190
+L+ +++ L T
Sbjct: 221 ILVRLRVELDT 231
>gi|315121772|ref|YP_004062261.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495174|gb|ADR51773.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 188
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 129/186 (69%), Positives = 160/186 (86%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRY WY L CLIFFI GF+ FI+Y+ Q+ IP +PS++AIVVLTGEP RIE+AFELLEN+
Sbjct: 1 MRYLWYSLAACLIFFIGGFVLFIQYIVQIPIPANPSINAIVVLTGEPNRIEKAFELLENK 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IG+++FISGVHHSVSKDILLQKIPIR+DLAECC+DIGYKALNT GNA+EA W K+++H
Sbjct: 61 IGQRVFISGVHHSVSKDILLQKIPIRKDLAECCVDIGYKALNTAGNAKEALEWIRKHDYH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLI+THDYH+PR LEL R NS +F+PYPII+HDL++N+ I +K+LR+ IEYLKIL
Sbjct: 121 HVLIITHDYHIPRILLELNRKNSMTKFVPYPIITHDLQKNTLILYMKMLRMTFIEYLKIL 180
Query: 181 LLSIQL 186
LLS+Q+
Sbjct: 181 LLSLQI 186
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R F LF+ + + GF+ F V +Q+ P+ A+VVLTG RI +L+
Sbjct: 37 RLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGSARIAEGLDLIA 96
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGV+ S L L +CC+D+ AL+T GNA+E + W
Sbjct: 97 AGKGKRLLISGVNEDTSVAALKAINTNHAPLFDCCVDVERAALDTIGNARETAKWVADKG 156
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT YHMPR+ LE +R + P+ +I L + LR L++EY+K
Sbjct: 157 YSSLIVVTSSYHMPRSLLEFRRTMPKLNIKPHAVILEPLAREGWWKNPETLRFLVVEYVK 216
Query: 179 ILLLSIQLSLSTQTASQFFITLI 201
+ +++ L QT S +++
Sbjct: 217 YVGAAMREYLKPQTISALRGSML 239
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q+ P P AI+VLTG RIE +LL+ ++G ++ ISGV+ + +
Sbjct: 60 FVAFTEKVGQLTPPQPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTTTHPN 119
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE
Sbjct: 120 RLIRIMNINPRLFSCCVDIDHQAVNTQGNAKESAHWIKKHRYKTLYIVTHDYHMIRSLLE 179
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V FI YPI + ++ I + +R+L +EY+K + + I++ LS+
Sbjct: 180 FKYLMPDVNFIAYPIKQN--VADNWIKQANQIRLLALEYIKSISVKIRIILSS 230
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 16 IMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ F++F V+Q+ P P V AI+VLTG RIE ELL+ ++G ++ ISGV+ ++
Sbjct: 52 CLTFVAFTEKVEQLTPPHPLPKVDAIIVLTGGKNRIETGLELLQKKLGSRLLISGVNTTI 111
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ L++++ I L CC+DI + A NT+GNA+E++ W K+ + + IVTHDYHM R+
Sbjct: 112 HPNKLIRRMNINPRLFACCVDIDHHATNTQGNAKESAHWINKHRYKTLYIVTHDYHMIRS 171
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
LE + + + FI YPI + +S I + +R+L +EY+K + + I++ LS+
Sbjct: 172 LLEFKYLMPNINFIAYPIKQN--VTDSWIKQANQIRLLALEYVKNISVKIRIILSS 225
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G + ++ GF+ F+ + + IV LTG RI A +LL G ++
Sbjct: 43 LGAGLGMLALFAGFLVFVSALARHERTPTDRADGIVALTGGAQRIGDAIDLLAGGYGRRL 102
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
I+GV+ S+D + + P ++ L CC+D+ Y+A NT GNA E W + F V +V
Sbjct: 103 LITGVNERTSRDEIARLNPTQRALIACCVDLDYRARNTIGNAIETRRWMRAHRFSTVAVV 162
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T +YHMPRT +EL + +P+P+++ + + R+L EY+K L+ +
Sbjct: 163 TSNYHMPRTLVELDHALQDSDRVLPHPVVTEAFDADRWWQNPPAARLLASEYMKFLVSWV 222
Query: 185 QLSLSTQTASQFFITLI 201
+ LI
Sbjct: 223 RTRFEADPERSRAAILI 239
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + + + IVVLTG RI A +LL G ++ I+GV+ S+D
Sbjct: 47 FLVFVGGLARTEQQPYARADGIVVLTGGAQRIGDAIDLLAAGFGRRLLITGVNERTSRDE 106
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + P +Q L CC+D+ Y+A NT GNA E W +N F + +VT +YHMPRT LEL
Sbjct: 107 IARLNPGQQHLISCCVDLDYRARNTIGNAIETRRWMRENGFRTIAVVTSNYHMPRTLLEL 166
Query: 139 QRIN-STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFF 197
S + +P+P++ + ++ R+L EY+K L+ ++ +
Sbjct: 167 DHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLASEYVKFLVAWLRTRIEADPEDSRA 226
Query: 198 ITLI 201
L+
Sbjct: 227 AVLM 230
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F +F+ ++ + IVVLTG R+ A +LL + G+++ ISGVH +
Sbjct: 42 FAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASE 101
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P +D CC+D+ A NT NA E WA + F +++VT +YHMPR E+
Sbjct: 102 ISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEM 161
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
++ IP+ +I + + LR+LL EY K + + ++ L+ + I
Sbjct: 162 SHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLA-----RLGI 216
Query: 199 TLIEE 203
++ E
Sbjct: 217 DIMPE 221
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 88/194 (45%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+ + G + + G F + + D AIVVLTG R+ FELL
Sbjct: 33 LHALFGGALTLAVAWFAGLFLFAAGLPRTPPEDDRQTDAIVVLTGGSERLAAGFELLRAH 92
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
K+FISGV+ V LL+ ECCI +GY A +TEGNA E + W + F
Sbjct: 93 RARKLFISGVYRGVDVQELLRLSRQAPGDLECCIVLGYAADDTEGNAAETALWVRQEGFR 152
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ +VT +YHMPR+ +E +R V I +P+ ++ +++ EY K L
Sbjct: 153 SLRVVTANYHMPRSLVEFRRALPEVDLIAHPVAPPNVRLEHWWRWPGTASLIVGEYNKFL 212
Query: 181 LLSIQLSLSTQTAS 194
L + L A+
Sbjct: 213 LAWTRALLPVPAAT 226
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 42 LVVIVFIFWGGFIIFSEKTERLVPPTPLPKADAIIVLTGGEHRIETGLHLLQKGLGSRLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ S + + + I L CCIDIG++A+NT GNAQE++AW +K+++ + IVT
Sbjct: 102 ISGVNTSTNLKSFMHNMHISPQLISCCIDIGHQAINTRGNAQESAAWIKKHHYKTLYIVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYH+ R+ EL+ + + FI YP+ + S+I +IK R+L+ +Y+K L + I+
Sbjct: 162 HDYHIWRSMRELKYLMPDIHFIAYPVKKS--KAESTIQQIKQARILIFQYIKTLQVYIRT 219
Query: 187 SL 188
+
Sbjct: 220 AF 221
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 93/182 (51%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G V + + F SF V + P P AIVVLTG RI +A LLE E++
Sbjct: 58 LGFIVVVGLVVGSFASFAERVATIETPRDPRADAIVVLTGGKERISKAMRLLEEGRAERL 117
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S + Q L CC+D+ ALNT GNA E ++W ++ F +L+V
Sbjct: 118 LISGVHPGSSARQIAQATSSDLPLFTCCVDLDRAALNTLGNATETASWVAEHEFETLLVV 177
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T YH+PR LEL + +PYP+ S + + + L++L+ EY+K L ++
Sbjct: 178 TSAYHLPRAELELAEVLPNAGLLPYPVFSSERDLTAWYSSFDTLKLLMREYVKYTLARLR 237
Query: 186 LS 187
++
Sbjct: 238 IT 239
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q P P AI+VLTG RIE +LL+ ++G ++ ISGV+ +
Sbjct: 62 FVAFTEKVGQFTPPHPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTRTHPN 121
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT GNA+E++ W +KN + + IVT DYHM R+ LE
Sbjct: 122 KLIRIMNINPRLFSCCVDIDHQAINTRGNAEESAHWIKKNRYKTLYIVTDDYHMTRSLLE 181
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + + FI YPI +S I ++ +R+L +EY+K + + I++ L +
Sbjct: 182 FKYLMPDINFIAYPIKQD--VADSWIKQVNQIRLLALEYIKNISVKIRIILFS 232
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 50 LAIIVFIFWGGFIVFSEKTERLSPPKPLPKADAIIVLTGGENRIETGLHLLQKGLGSRLL 109
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CCIDIG++A+NT GNA+E++ W +K++F + IVT
Sbjct: 110 ISGVNTTTNLKGFMHNRHITPRLVSCCIDIGHQAINTRGNAKESATWIKKHHFKTLYIVT 169
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYHM R+ EL+ + + FI YP+ + S+I +I +R+LL +Y+K L + ++
Sbjct: 170 HDYHMWRSMRELKYLMPDIHFIAYPVKKSN--AESAIQQINQIRILLFQYIKTLQVYLRT 227
Query: 187 SL 188
+
Sbjct: 228 AF 229
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 21 SFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
+F V + P V AI+VLTG RIE +LLE G ++ ISGV + + L
Sbjct: 56 AFTEKVGRFTPPHPLQKVDAIIVLTGGKNRIETGLKLLEKGFGSRLLISGVSTTTHPNKL 115
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ + I L CCIDIGY+A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE Q
Sbjct: 116 IRMMNINPQLFSCCIDIGYQAINTQGNAKESADWIKKHRYKTLYIVTHDYHMMRSLLEFQ 175
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + FI YPI +S I + +R+L++EY+K + + I+++LS+
Sbjct: 176 YLMPNINFIAYPIKQD--VADSWIKEANQIRLLVLEYIKNICVKIRMTLSS 224
>gi|254562029|ref|YP_003069124.1| hypothetical protein METDI3633 [Methylobacterium extorquens DM4]
gi|254269307|emb|CAX25273.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 234
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D +++
Sbjct: 37 VAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRDEIVRL 96
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +EL+
Sbjct: 97 NPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHAL 156
Query: 143 ST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ + + R+L EYLK L+ + + F LI
Sbjct: 157 KDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSRFAVLI 216
>gi|188582230|ref|YP_001925675.1| hypothetical protein Mpop_2985 [Methylobacterium populi BJ001]
gi|179345728|gb|ACB81140.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 234
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ V+Q P + IV +TG R+ A +LL G+++ ISGV+ ++D +++
Sbjct: 37 VAVVEQAERPSLDGIDGIVAMTGGSQRVGDAIDLLAEGHGKRLLISGVNERTTRDEIVRL 96
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
P ++ CC+D+ Y+A NT GNA E W ++ F + +VT YHMPRT +EL+
Sbjct: 97 NPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHGFTAIAVVTSSYHMPRTLVELRHAL 156
Query: 143 ST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ ++R+L EYLK L+ + F LI
Sbjct: 157 RDGETLIPYPVVSDGLDLGRWWADPAVMRLLGAEYLKFLVAWGRTRFEADPEQSRFAVLI 216
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKI 83
++ + + IVVLTG R+ A ELL + G+++ ISGVH + + + +
Sbjct: 40 AQLRGAEVRPGRNADGIVVLTGGSSRVSDAIELLSSGYGKRLLISGVHRTNGVHDISRTV 99
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
P +CCID+ A+NT NA EA WA + F +++VT +YHMPR +E+
Sbjct: 100 PDSHRWLDCCIDLDRSAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRAIVEMSHAMP 159
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
V+ IP+ ++ + R+LL EY K L ++ L++
Sbjct: 160 DVELIPFAVVGDKWRDEPWWSSGTTFRLLLSEYAKYLAAETRVRLAS 206
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 8 LFVCLIFF-----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
L +CL F + GFI F +++ +VVLTG RI A ELL
Sbjct: 22 LLLCLAGFLASGFVAGFIGFALSLERAEPILTVQADGVVVLTGGSDRIHEAAELLARGQA 81
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HH 121
++ I+GV+ S + + +P+ + L +CCID+GY+AL+T GNA E WA+
Sbjct: 82 RRLLITGVNKSTRGPEIAKLLPVSRQLFDCCIDLGYEALDTAGNAAETREWAKARGIGGS 141
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT +YHMPR +EL V+ P+P++S ++ + + R++ EY+K L
Sbjct: 142 LIVVTSNYHMPRALVELSAALPGVELYPFPVVSEHMQVADWLDDASVARLIGGEYVKYLF 201
Query: 182 LSIQLSL 188
+ L
Sbjct: 202 ALARTRL 208
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 91/181 (50%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + ++ GF F ++++ P IV LTG P RI A++LL+
Sbjct: 16 LRILVGFTALLAAAYVAGFFLFTAELERIPPVRVPVADGIVALTGGPDRITAAYKLLQEG 75
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ I+GVH VS L + +P +CC+D+G+ A NT GNA E + W + N+
Sbjct: 76 KGNRLLITGVHPDVSVASLKEMVPGGSAKFDCCVDLGHMAENTIGNATETAEWVRERNYR 135
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT YH+PR LEL R V+ +P+ L + R+L+ EY K L
Sbjct: 136 SIILVTSTYHLPRARLELARAMPDVEISAFPVFQDTLHLDGWWAYPGTTRLLISEYTKYL 195
Query: 181 L 181
L
Sbjct: 196 L 196
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R + + L+ G F F + V +P + AIVVLTG R+ A LLE
Sbjct: 49 LRVLFVAVVTALLAGTAGQFAMFAQKVANARVPATANADAIVVLTGGHARVNEAVRLLEE 108
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ ISGVH +++ L L +D+ ALNT GNA E + W KN F
Sbjct: 109 GRANRLLISGVHPGTTREQLAAVTASNMPLETNSVDLDRVALNTAGNAVETANWVRKNGF 168
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+L+VT YH+PR +EL V I YP+ S DL+ + + +R+L+ EY+K
Sbjct: 169 SSLLVVTSAYHLPRAKVELAGALPDVSLIAYPVFSKDLKLDHWYREPATMRLLMREYVKY 228
Query: 180 LLLSIQLSL 188
+L +++++
Sbjct: 229 ILARLRITV 237
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + ++ + +G ++F V Q + P +VVLTG R+E A +LLE G++
Sbjct: 6 ALLIVVMVWFVGLLAFTSRVDQSTPALEPPVSDGVVVLTGASNVRLEVATKLLEAGKGKR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ S++ +L + + ECC+D+GY A +T GNA E + WA ++ +++
Sbjct: 66 LLISGVNREASREDVLGVTKAVRPIYECCVDLGYAAADTIGNASETAEWARAKDYRSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL V PYP+++ L + R + +EY K L +
Sbjct: 126 VTADYHMPRSMLELHASMPGVTLHPYPVVTESLNAHRWWQGGTSARRMTVEYCKYLAILG 185
Query: 185 QLSL 188
+ +
Sbjct: 186 REAF 189
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 99/175 (56%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F++F + AIVVLTG P RI A LL + G ++ I+GV+ + S D
Sbjct: 84 FLAFTAQIAAREPAAVKPADAIVVLTGGPSRIVDAVGLLADGRGRRLLITGVNPTTSMDE 143
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P + L CCID+G+KALNT GNA EA+ WA + F +++VT +HMPR +EL
Sbjct: 144 MRRALPDGEHLLGCCIDLGHKALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMEL 203
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
R V+ + YP+++ + S L++L+ EYLK ++ ++++ + A
Sbjct: 204 GRALPDVELVSYPVVTTRTQPESWWSDPGTLKLLVKEYLKFIMATVKIRPAQAVA 258
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVK-QMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + L+ + +G ++F V P+ P +V LTG R+E A LLE G++
Sbjct: 6 ALLIALMIWGLGLVAFTGRVDLSTPAPEPPEADGVVALTGASSLRLEAATRLLEEGKGKR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + + + +CC+D+G+ A NT GNA E + WA + +++
Sbjct: 66 LLISGVNRETTRADVQSVTKAVKPIYDCCVDLGFTAANTVGNALETAEWARSKGYKSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL V+ PYP+ + DL + R +++EY K L +
Sbjct: 126 VTADYHMPRSMLELSAAMPGVKLFPYPVKT-DLNAHRWWKTSISARRMIVEYCKYLAILG 184
Query: 185 QLSL 188
+ +
Sbjct: 185 REAF 188
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 3/191 (1%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPI-RIERAFELLEN 59
V ++ + G + F V + P AIVVLTG R++ LLE
Sbjct: 2 RSLIAFLVVVLLWAAGLLVFADRVIESTPAIEPEEPADAIVVLTGASDMRLKEGMRLLER 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ GE++FISGV+ V + L+ + L ECC+D+GY+A NT NA+E + WA ++F
Sbjct: 62 RKGERLFISGVNRDVKRPELMDVTEGSKRLYECCVDLGYQAENTVQNAREIAEWARGHDF 121
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+++VT DYHMPR+ LEL+ FI YP+ + DL K R++++EY K
Sbjct: 122 DTLIVVTSDYHMPRSLLELKADMPDAHFISYPVPTADLSARDWWKSGKGARLIVLEYCKY 181
Query: 180 LLLSIQLSLST 190
L + + ++ +
Sbjct: 182 LAILGRDAVLS 192
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W NN+H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANNYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L +++ ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRVGSAS 163
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 6 YGLFVCLIFFIMG--FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +F IMG F+ F V+Q++ P AI+VLTG RIE LL+ +G
Sbjct: 14 VAFCLLSLFLIMGTHFVIFSEKVEQLYPPVSLSKADAIIVLTGGERRIETGLRLLKQGLG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISGV+ + LL+ + I L ECC+D+GY+A NT+ NA+E++ W +K+++ +
Sbjct: 74 SRLLISGVNATFHPKRLLRNMHIDPQLFECCVDLGYQATNTKSNAEESAVWIKKHHYKTL 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
IVTHDYH+ R+ LEL+ + + FI YPI + + + ++ +R+L EY+K +
Sbjct: 134 YIVTHDYHIARSLLELRYLMPDINFIAYPIKENVTQNK--VKQLNKIRMLASEYIKNIGF 191
Query: 183 SIQLSLST 190
I+ +
Sbjct: 192 QIRSVFQS 199
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTG-EPIRIERAFELLENQI 61
F + V + ++ G F V+ PD AIV LTG R+ A LLE
Sbjct: 3 FLTLIAVVALMWLTGLFVFAERVRGFTPAPDPARADAIVSLTGPSAERVNAAIRLLEQGK 62
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
G+++ ISGV+ V + L P L CC+D+G++A NT GNAQE +AWA +
Sbjct: 63 GDRLLISGVNREVRRQELRALTPGSSKLFNCCVDLGFEAENTVGNAQEIAAWARSKGYDD 122
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT DYHMPR+ LE++ V+ PY + + L+ + R + +EY+K L
Sbjct: 123 LIVVTSDYHMPRSLLEIRGAAPGVRLTPYAVSTPSLDNAGWWRATETARRMTLEYMKYLA 182
Query: 182 LSIQLSLSTQT 192
+ + + T
Sbjct: 183 VLGREGMHRLT 193
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + L+ + +G ++F V Q P+ P +V LTG R+E A LLE+ G++
Sbjct: 6 ALLIALMIWGLGLLAFTGRVDQSTPAPEPPISDGVVALTGASTLRLEAATRLLEDGKGQR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + + + +CC+D+G+ A NT GNA+E + WA + +++
Sbjct: 66 LLISGVNREATRAEIQAVTKAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL+ V PYP+ + DL R +++EY K L +
Sbjct: 126 VTADYHMPRSMLELRAAMPNVVLHPYPVKT-DLNARRWWKTGVSARRMIVEYCKYLAILG 184
Query: 185 QLSLSTQTASQFFITLIEEIT 205
+ + +E++
Sbjct: 185 REAFLGLGPEDKAAPAAKEVS 205
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEK 64
LF+ ++ F++F ++ + P+ P AI+VLTG RI+ F+LL+ +G +
Sbjct: 44 LALFITILLIGATFVTFSEKIEHLTPPNPLPQADAIIVLTGGENRIKTGFDLLQKGLGSR 103
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + L+ I L +D GY+A NT+GNA+E++AW +++N+ V I
Sbjct: 104 LLISGVNSTIDLNKLIDATYINPHLLVSRVDFGYEATNTKGNAEESAAWIKQHNYKTVYI 163
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VTHDYHM R+ LEL+ + + FI YPI + S I +I +R+L+ EY+K + + I
Sbjct: 164 VTHDYHMVRSLLELKYLMPHIDFIAYPIKENT--TGSWIKQINQMRILVSEYIKNIGVYI 221
Query: 185 QLSL 188
+ +
Sbjct: 222 RTAF 225
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 8 LFVCLIFFIMG----FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
L C+ F++G F +F V +P AIVVLTG R+ A LLE
Sbjct: 55 LVACVTVFVVGTTIQFANFANRVSTATVPVSTQADAIVVLTGGQERVSEAVRLLEEGHAG 114
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH ++ + + L E +++ ALNT GNA E + W KN F +L
Sbjct: 115 RLLISGVHPGTTRKQIAVVTASAKPLEEGSVELDRVALNTAGNATETANWVRKNGFDSLL 174
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YH+PR EL V I YP+ + DL+ + K +R+L+ EY+K +
Sbjct: 175 VVTSAYHLPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVAR 234
Query: 184 IQLSLST 190
+++++ +
Sbjct: 235 LRIAVRS 241
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GN E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 90/172 (52%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF+ F V + + IVVLTG +R+E +L+ +++ ISGV+ V
Sbjct: 20 VFGFVLFSVTVTRDDVGGWDKADGIVVLTGGDLRVEAGAKLMNEGRAKRLLISGVNRKVR 79
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++ + + + + CC+D+GY+AL+T GNA E WA N + ++IVT YHMPR+
Sbjct: 80 REEMQRLLGLDAKTFNCCVDLGYEALDTVGNADETRTWARNNGYTKLIIVTSRYHMPRSL 139
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
EL + V IPYP+ E + RVL+ EYLK L +L+
Sbjct: 140 AELALVMPKVTLIPYPVTPRHFPETAWWLHSSTTRVLVSEYLKFLPAVARLA 191
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 105/185 (56%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ + F+ F + V + P+ S IVVLTG RIERA LL+ + ++ ISGV
Sbjct: 12 LVAGLGISFLLFAQSVVSIRAPEEASADGIVVLTGGQDRIERAVGLLQEERARRLLISGV 71
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ + + ++++ L CC+D+ KALNT GNA E +AWA + F +L+VT YH
Sbjct: 72 YPATTDRQIVERTSGDLPLFRCCVDLDRKALNTVGNAVETAAWARTHGFSSLLLVTSAYH 131
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+PR LEL+ + ++ +PYP+ + DL +S + + +R+LL E++K L +++
Sbjct: 132 LPRAALELKAVMPELELVPYPVFAEDLMLSSWYRRPQTIRLLLREFVKYTLARLRIGTIG 191
Query: 191 QTASQ 195
A++
Sbjct: 192 LPAAE 196
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG-EPIRIERAFELLE 58
M++ V LI +++G +F V+ + D P IV LTG R+ A LLE
Sbjct: 1 MKFLALVGIVGLI-WLVGLFAFADRVRNLTPADEPARADGIVALTGPSAERVNAAVRLLE 59
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
GE++ ISGV+ V + L + P L CC+D+G++A +T GNAQE +AWA N
Sbjct: 60 QDKGERVLISGVNREVRRQELRELTPGSNRLFNCCVDLGFEAEDTGGNAQEIAAWAGSKN 119
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT DYHMPR+ LE++ ++ PY + + L+ + R + +EY+K
Sbjct: 120 YTSLIVVTSDYHMPRSLLEIRSAAPGLELTPYAVSTPSLDNSRWWRAAVTARRMTLEYMK 179
Query: 179 ILLLSIQLSL 188
L + + ++
Sbjct: 180 YLAVLGREAV 189
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 1 MRYFWYGL----FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPIRIERAFE 55
M+ W L FV ++ ++GF ++ V +P + AI+VLTG+ R+ E
Sbjct: 1 MKQSWLWLRGLCFVVVLASMIGFAAYAGKVTGYDLPATDNTVDAIIVLTGDAGRLSAGGE 60
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL++ + ISGVH SV+ + ++ + D CC+ +G +A +T GNA+EA+A+ +
Sbjct: 61 LLQDGRASHLMISGVHPSVTTADIRRQTGLGDDAFSCCVTLGREATDTVGNAREAAAYVQ 120
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N + ++IVT DYH+PR+ LE + V IPYP+ + + LR+ L E
Sbjct: 121 ANGYDRLIIVTSDYHLPRSLLEFRSHMPGVDLIPYPVRTQAP-----WQDVGALRLWLQE 175
Query: 176 YLKILLLSIQLSLSTQTASQ 195
Y K + ++ SL++QT
Sbjct: 176 YAKYTTVQLRHSLTSQTEDA 195
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R L + + GF F+ +K IVVLTG RI A LL
Sbjct: 25 LRLGGVLLLAATVALLAGFGLFVAGIKGREAQTARRADGIVVLTGGAERITDATNLLVEG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ I+GVH + + + +P ++ ECC+++G ALNT GNA E + WA ++ F
Sbjct: 85 RGTRLLITGVHPDTTLAEIGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT +HMPR +EL+R V+ +PYP++ EN + +R+L +EY+K +
Sbjct: 145 SLLVVTSAWHMPRALVELRRALPDVELVPYPVVPKRGPEN-WEASLANVRLLFVEYVKFI 203
Query: 181 LLSIQLSLSTQTASQFF 197
+ + + ++Q
Sbjct: 204 GAWLGVRSWPELSTQLG 220
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
F+ G+++F + + A+V LTG R+ A + L +++ I+GV+ +
Sbjct: 32 FVAGYVAFALSLARQEPILKVEAEAVVALTGGSDRVLDAADFLARGQAKRMLITGVNRAT 91
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPR 133
+L + +P+ +DL CC+D+GY+A++T GNA+E WA+ N +++VT +YHMPR
Sbjct: 92 RSSVLARILPVSRDLFNCCVDLGYQAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPR 151
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
+EL ++ P+P++S ++ + + R++ EY+K L ++ LS
Sbjct: 152 ALVELSAALPDIKLYPFPVVSEHVDVADWATDLGVARLVGSEYVKFLGALLRTRLS 207
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG RI A +LL G+++ ISGV+ +++ +++ P ++ CC+D+ Y+A N
Sbjct: 1 MTGGAQRIGDAIDLLAGGRGKRLLISGVNERTTREEIIRLNPAQEQWISCCVDLDYRARN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQFIPYPIISHDLEENS 161
T GNA E W ++ F V +VT YHMPRT +EL+ + IPYP+++ LE
Sbjct: 61 TIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPVVTEGLEIER 120
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
R+L EYLK L+ ++ T F LI
Sbjct: 121 WWADPAATRLLGAEYLKFLVAWLRTRFETDPEQSRFAVLI 160
>gi|306842871|ref|ZP_07475508.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
gi|306286958|gb|EFM58475.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
Length = 162
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 54/148 (36%), Positives = 91/148 (61%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+ ALN
Sbjct: 1 MTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDRTALN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ + E S
Sbjct: 61 TVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSW 120
Query: 163 IFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + LRVL EY+K L +++ ++
Sbjct: 121 VAEGDTLRVLFTEYVKYLGAIVRVGSAS 148
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 2 RYFWYGLFVCLIF---FIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
R + V ++ GF+ F V + P + IVVLTG +RI++A +LL
Sbjct: 37 RLCLAAVLVGVLLGGYLAGGFVRFAEEVSLLAKPAPIGAADGIVVLTGGALRIDQAIDLL 96
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ G ++ ISGV+ S L + +DL CC+D+ Y ALNT GNA+ A WA +
Sbjct: 97 KEGRGRRLLISGVNPGTSAATLARMTDTDRDLFACCVDLDYAALNTVGNAEIARNWAREQ 156
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
F +++VT DYHMPR+ E RI PY + DL + LRVLL EY
Sbjct: 157 GFRDLILVTSDYHMPRSLREFDRIGELRSVTPYAVRRDDLWSAELMPNTAGLRVLLTEYA 216
Query: 178 KILLLSIQLSLS 189
K++ ++L
Sbjct: 217 KLIAARVRLVFG 228
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 20 ISFIRYVKQMHI---PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+ + + AIVVLTG R+ ELL +K+F+SGV+ V
Sbjct: 36 FWYAADIPRSSPTGAEAERLTDAIVVLTGGRNRLSTGLELLAAGRAKKLFVSGVYDGVEV 95
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL+ ECCI +GY A +T GNA E + W FH + +VT +YHM R+ L
Sbjct: 96 QELLKLSRHSPTEMECCITLGYSADSTIGNAYETADWMHDQGFHSLRLVTANYHMRRSLL 155
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
EL V +P+P+++ + + +L+ EY K+L++ ++
Sbjct: 156 ELSMAMPDVDLLPHPVVAPTVHLDDWWMWPGTANLLVTEYNKLLVVGLR 204
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + GF+ F+ V + AIVVLTG R+ +LLE + +++FI
Sbjct: 16 LVALAALWSGGFLWFVDEVPRAVDDQTSHTDAIVVLTGGRERLTTGLDLLEAGLSQRLFI 75
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V ++Q L E + +GY A +T GNA E + WA ++N + IVT
Sbjct: 76 SGVYKGVDLAEIIQLGRGHAGLKEAVV-LGYAADDTVGNAIETALWATEHNLRSLRIVTG 134
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YHMPR E + + I +P+ ++ +L EY K L I+
Sbjct: 135 AYHMPRALAEFRHALPEITLIAHPVFPDQVKSREWWRWPGTAALLATEYSKYLAAIIRHW 194
Query: 188 LSTQTA 193
+ A
Sbjct: 195 FLPRKA 200
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF F V M AIV LTG+ RI A LL ++ ISGVH +
Sbjct: 1 MCGFFIFAYSVSIMPSTRLKDADAIVALTGDEERIAAAVRLLSEGKARRLLISGVHKTTR 60
Query: 76 KDILLQKIPIRQD----LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++ R L CC+D+ A NTE NA E + W K + +++VT YHM
Sbjct: 61 APQIMSLTTSRGSRSWSLFSCCVDLD-NAHNTEANAAETTNWVRKRGYRSIIVVTSTYHM 119
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
PR +EL + V+ +PYP+ + L+E + VL EY+K + + ++
Sbjct: 120 PRALIELHQAMRDVELVPYPVRAPRLDER-WWRDSRTAWVLWKEYMKYITAMARYGANSI 178
Query: 192 TASQFFITLIEEI 204
+ + + ++
Sbjct: 179 SNASARVEHEPQL 191
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPI-RIERAFELL 57
MR + + + ++ G +F V P +A IVVLTG RI+ LL
Sbjct: 1 MRRL-LAVVLVIGLWLAGLYAFADRVIHSTPAAEPEEAADAIVVLTGASDMRIKEGMRLL 59
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + G ++ ISGV+ V ++ LL + L ECC+D+GY+A T GNA E + WA+
Sbjct: 60 ERRKGARMLISGVNREVKREELLPVTEGSKKLYECCVDLGYEAQTTLGNAYEVAEWAKAK 119
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
F +++VT DYH+PR+ LE++ V+ YP+ + L+ + RVL++EY
Sbjct: 120 GFDDLIVVTSDYHVPRSLLEIKAALPGVKLHAYPVATPTLDAREWWKSWRSSRVLIVEYS 179
Query: 178 KILLLSIQLSLSTQTAS 194
K L + + S+ T+S
Sbjct: 180 KYLAILARDIFSSLTSS 196
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R+ F+ L F++GF F+R + AIVVLTG P R+ A LL++
Sbjct: 7 RFLRLTAFILLTAFVVGFALFVRQARTFTPDASVRGQAIVVLTGGPNRVSTAAALLQDGS 66
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
G ++ ISGV+ + Q L ECC+D G +A +T GNA E +AWA ++ +
Sbjct: 67 GRRLLISGVNPDSPPADIAAAAGASQALFECCVDFGLQAADTIGNAAETAAWARQHGYDR 126
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT DYHMPR LELQ V+ + Y + + R L+EY+K
Sbjct: 127 IIVVTSDYHMPRALLELQAAMPDVRLVAYGVPAPAP-----WSGGHEARRWLVEYVKYAA 181
Query: 182 LSIQLSLST 190
+ + + T
Sbjct: 182 VYGRERVRT 190
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPI--RIERAFELLENQIGE 63
V + + G ++ V+Q P IV LTG RI A LLE+ G
Sbjct: 6 AFLVLALIWFAGLFAYAHRVQQSTPARLPPPADGIVALTGAGSKERIAAAIGLLEDGYGR 65
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ +SGV+ S++ + + L +CC+D+G+ A +T GNA+E + W E + +
Sbjct: 66 RVLVSGVNPEASREDIRNLSRAVRRLYDCCVDLGFTAADTVGNARETAEWTEAMRYRSLT 125
Query: 124 IVTHDYHMPRTFLELQRINS--TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
IVT DYHMPR LEL+ + V+ Y + + L+ + + + R++++EY K L
Sbjct: 126 IVTADYHMPRAMLELRAVFHGTGVRLSTYAVPTPALKSSHWWRQPRAARLMVVEYCKYLA 185
Query: 182 LSIQLSL 188
+ + ++
Sbjct: 186 ILGREAV 192
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQ 60
R ++ G F V I D + AIVVLTG R+ +LL
Sbjct: 6 RRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLDLLARG 65
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+G K+F+SGV V+ D L I + + +G+ AL+T GNA+E + W +F
Sbjct: 66 LGRKLFLSGVGVEVTLDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFT 125
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ +VT YHMPR+ +E + V+ I +P+ +++ R++ EY K L
Sbjct: 126 SLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAEEYSKFL 185
Query: 181 LLSIQLSLSTQTASQFFITL 200
+ ++ +LS L
Sbjct: 186 VAWLRRTLSPVNVEALAAPL 205
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + +G + + + P+ A+VVLTG R++ LL +F+
Sbjct: 27 VLSLATAWTIGLVRYASRIPTQPTLVEPAA-AVVVLTGGSKRMDAGVALLAKGTAPVLFV 85
Query: 68 SGVHHSVSKDILLQKIP-----IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
SGV H V + IP + Q +CC+ +GY A +T GNA+E + WA +
Sbjct: 86 SGVDHRVDPARIRDLIPDAGDSLDQATIDCCVVLGYGASDTLGNARETALWARATERTSL 145
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT +YHMPR LE V+ +PYP+I D+ ++ L ++ E+ K +
Sbjct: 146 ILVTSNYHMPRARLEFTHALPEVRLVPYPVIPPDVRMDAWWRWPGTLGLVAGEWTKYVFA 205
Query: 183 SIQLSLSTQTASQF 196
+++ L+ +S
Sbjct: 206 RVRIGLADLVSSAA 219
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 77/164 (46%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ 81
F + A+VVLTG R+ LLE G K+F+SGVH V LL+
Sbjct: 31 FAADLAIRVEDQSTVTDAVVVLTGGAERLNSGIALLEAGRGRKLFVSGVHRGVDLPDLLR 90
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + A CCI +G+ A +T GNA E +AW + F + +VT YHM R+ LEL+R
Sbjct: 91 QAHVSPERARCCIVLGHAADDTVGNATETAAWMGREGFSSLRLVTAAYHMRRSLLELRRA 150
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
I +P+ + + +L +EY K L +
Sbjct: 151 LPDATIIAHPVFPDAFKRDQWWRWPGTAHLLAVEYTKYLAALAR 194
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFE 55
R + + ++ GFI F+RY + + + P AIVVLTG RIERA
Sbjct: 26 RKRRFAILCLVVLVAGGFIVGSFLRYAETTAAVSRLENVPPADAIVVLTGGANRIERAIS 85
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL+N G+++ ISGV+ + S + + DL ECC+DI AL+T GNA EA WA
Sbjct: 86 LLKNGYGKRLLISGVNENTSARAIARATNTDLDLFECCVDIDVAALDTVGNAMEAVRWAA 145
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+N F +++VT DYHM R+ +E R+ + P + +L ++ +I + L VL++E
Sbjct: 146 ENGFDELILVTSDYHMQRSLIEFDRVGDLDRITPVAVRLDELWQDDTIPTRRGLEVLVME 205
Query: 176 YLKILLLSIQLSL 188
Y K++ ++ ++
Sbjct: 206 YAKLMAARVRAAI 218
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLEN 59
+R + + + F GF F+ + P + P IV LTG RI+ + LL
Sbjct: 4 IRLSFRLILLACFAFAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLAR 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GEK+ ISGV + LL LAE I +GY+A +T GNA E + W N+
Sbjct: 62 NQGEKLLISGVDTQTTLGELLPPT-APPALAER-ITLGYQARSTIGNATETAVWVADNHI 119
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+++VT YHM R LEL R V PYP++ +E + LR+L +EYLK
Sbjct: 120 TSLIVVTASYHMRRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKW 176
Query: 180 LLL 182
L
Sbjct: 177 LGA 179
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ V L+ +++GF F ++ Q D AIVVLTG RI+R LL++ +++
Sbjct: 4 RFIAVTLLGWMLGFAWFAIFLPQ--PLDGRQTDAIVVLTGGAGRIDRGLALLQDGAAKRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + + L CCI +G +A++T NA E + W E+ +F V ++
Sbjct: 62 LISGVDRSVRPVELAAQYKVPERLFSCCITLGREAIDTRSNAIETAHWLERRDFKTVRLI 121
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL++ V + + S L +L EY K LL
Sbjct: 122 TTDWHMRRSALELRQALPERVTLVYDAVPSR-----------PSLTMLAREYNKYLLRRA 170
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ + L+ +++GF F + Q D AIVVLTG RI+R LL++ +++
Sbjct: 4 RFIALTLLAWMLGFAWFAILLPQ--PLDGRQTDAIVVLTGGAGRIDRGLSLLQDGAAKRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + L CCI +G +A++T NA E + W E+ +F V ++
Sbjct: 62 LISGVDRSVRPAELAAQYDAPERLFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLI 121
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL++ V + + S L +L+ EY K LL
Sbjct: 122 TTDWHMRRSALELRQALPGRVTLVYDAVPSR-----------PSLMMLVREYNKYLLRRA 170
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ L+ +++GF F ++ D AIVVLTG P RI+R L++ ++
Sbjct: 4 RLAALALLGWVLGFAWFAIFLP--EPLDGRRTDAIVVLTGGPGRIDRGIALMQQGAARRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + L +CCI +G +A++T N E + W + ++ V +V
Sbjct: 62 LISGVDRSVRPGELAAQYDAPEALFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLV 121
Query: 126 THDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL Q + + + + SH L VL+ EY K LL I
Sbjct: 122 TTDWHMRRSALELTQALPPRIHIVYDAVPSH-----------PSLSVLMREYNKYLLRRI 170
>gi|329114135|ref|ZP_08242897.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
gi|326696211|gb|EGE47890.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
Length = 216
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 13 IFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVH 71
F GF F+ + P + P IV LTG RI+ + LL GE++ ISGV
Sbjct: 38 FAFAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGERLLISGVD 95
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ LL LAE I +GY+A +T GNA E + W N+ +++VT YHM
Sbjct: 96 TQTTLAALLPST-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHM 153
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
R LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 154 RRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWLGA 201
>gi|330993951|ref|ZP_08317881.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
gi|329758897|gb|EGG75411.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
Length = 201
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ + G F+ + + P IV LTG RIE + LL ++ ISGV
Sbjct: 4 AALAWTAGLAWFVHDAMRPPVLP-PRADGIVALTGGQGRIEESVRLLVQGRAGRLLISGV 62
Query: 71 HHSVSKDILLQKIPIRQDLAECC-IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
++ L+ +P LA +G +A +T GNA E +AW + H +++VT Y
Sbjct: 63 DPHATRGDFLRHLPPPVPLAAWTHTTLGSRATSTLGNADETAAWVREYGLHSLIVVTAGY 122
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
H+ R LE+ R V+ PI S L F +R++++EY K LL + +
Sbjct: 123 HIRRAMLEISRTVPGVRLYGDPIRSPALAHP---FHPATMRLMVVEYDKWLLACLDVVRL 179
Query: 190 TQT 192
T+
Sbjct: 180 TRP 182
>gi|254292607|ref|YP_003058630.1| hypothetical protein Hbal_0231 [Hirschia baltica ATCC 49814]
gi|254041138|gb|ACT57933.1| protein of unknown function DUF218 [Hirschia baltica ATCC 49814]
Length = 197
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L CL F+SF Q+ P D + A++ LTG RI A E+ ++Q +
Sbjct: 13 LVFCLFLIGYDFVSFSYRAAQLATPQFDTSNPHAVIALTGGSNRIAFAAEIAKDQNLP-L 71
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
FISGV+ D + + ECC +GYKA T N E + W+ K+ + ++IV
Sbjct: 72 FISGVNREAKPDEVAIAAGVDTAFFECCTTLGYKARTTYENGLEVAQWSTKSGYTRLIIV 131
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHM R LEL+R V + S ++ ++ ++ + + IE++K ++ +
Sbjct: 132 TSNYHMERALLELERAMPNVTLTGLAVASPAIKADAWWTDMRSAKRMGIEWVKWRIIKTR 191
Query: 186 LSLST 190
+
Sbjct: 192 RLFQS 196
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQ 60
R+ + ++ +++GF F+ + + + P IVVLTG R++ ELL
Sbjct: 24 RWPLRAVLALVVLWLVGFAWFLGDIAEERPINPMPHAGGIVVLTGGADRVKAGLELLMAG 83
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ISG + + I + I +G+ A T GNA+E +AWA +++
Sbjct: 84 AAPRLLISGAGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIG 143
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT DYHMPR LEL R V IP P+ + + +L++L+ E+ K +
Sbjct: 144 SLVVVTADYHMPRALLELHRALPGVTLIPEPVRPPAMTNPG---QPHMLKILVTEFCKYI 200
Query: 181 LLSIQLS 187
++ ++L
Sbjct: 201 VVRLRLG 207
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQ 60
R+ + ++ +++GF F+ + + + P IVVLTG R++ ELL
Sbjct: 24 RWPLRAVLALVVLWLVGFAWFLGDIAEERPINPMPHAGGIVVLTGGADRVKAGLELLMAG 83
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ISG + + I + I +G+ A T GNA+E +AWA +++
Sbjct: 84 AAPRLLISGAGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIG 143
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT DYHMPR LEL R V IP P+ + + +L++L+ E+ K +
Sbjct: 144 SLVVVTADYHMPRALLELHRALPGVTLIPEPVRPPAMTNPG---QPHMLKILVTEFCKYI 200
Query: 181 LLSIQLS 187
++ ++L
Sbjct: 201 VVRLRLG 207
>gi|326386450|ref|ZP_08208073.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209111|gb|EGD59905.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
Length = 194
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
F L + ++ +++GF+ F ++ DH A++ LTG RI+R E+L
Sbjct: 9 LFRRILSLMVLAWLLGFLWFALFLP--RPADHTRTDAVIALTGGSGRIQRGIEVLRADEA 66
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ +SGV V + + L CC+ +GY++ +T NA EA+ W + + V
Sbjct: 67 KRMLVSGVDSEVKPAEFEAEYGVPASLFACCMTLGYESFDTRSNALEAARWIARYDLRSV 126
Query: 123 LIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+VT D+HM R +L + + + SH +R+L +EY K L
Sbjct: 127 RLVTTDWHMRRAAFDLAVAAPKGLVIVEDAVPSH-----------PSMRILFVEYNKFLA 175
Query: 182 LSI 184
+
Sbjct: 176 RML 178
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + ++ GF F + H + IVVLTG RI+R +LE +K+
Sbjct: 12 RFLICLFMLWLGGFWLFYSF--HAHPTNKQVTDGIVVLTGGAGRIDRGLMMLERHQAKKM 69
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+SGV+ V + L I L ECC+D+G +A++T NAQE + W N++H V ++
Sbjct: 70 LVSGVNRQVKAEELAALYDIPSHLIECCVDLGTQAVDTSSNAQETAEWITLNHYHSVRLI 129
Query: 126 THDYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS- 183
T D+HM R EL I ++ + I SH RV +IEY K L
Sbjct: 130 TTDWHMARARFELSLMIGKDIKVVEDAIPSHA-----------GWRVWIIEYCKYLWRRS 178
Query: 184 -IQLSLSTQTASQFFITL 200
+ + ++ ++
Sbjct: 179 SVAIGFNSIPYPSAPASI 196
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W ++ +++GFI F ++ + A++V TG RIER E+++ +
Sbjct: 3 WRVGLAIVLVWVLGFIWFAGWLPGPAPME--RTDAVIVPTGYAGRIERGLEVVQTDSADT 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + +D+ ECC+ +G+ A +T GNAQE WAE + + +
Sbjct: 61 LLVTGVDPEVKPGEFAAQFKVPEDVMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRL 120
Query: 125 VTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT D+HM R EL+R V+ I + S L +LLIEY K L+
Sbjct: 121 VTSDWHMRRAATELRRQLPGDVKLIKDAVRSE-----------PSLWLLLIEYHKWLVSR 169
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 79/192 (41%), Gaps = 6/192 (3%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
F L+ GF+ F + + IVVLTG R+ +LL G
Sbjct: 31 FGLLGGFALLVLSGGFLWFAWQSQHVLRAPS-HADGIVVLTGGAERVATGLKLLAAGRGS 89
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ISGV S L + I E + +GY+A T GNA E + WA + + V+
Sbjct: 90 VLLISGVAKGASLGTLARVAGIDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVI 149
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YHMPR EL+R V P + + IL++L EYLK L
Sbjct: 150 VVTAGYHMPRALAELRRAMPDVILYPETVHPDQGGSL-----LNILKLLSSEYLKWLGAE 204
Query: 184 IQLSLSTQTASQ 195
+ LS T
Sbjct: 205 LHLSSLTPVRET 216
>gi|87198723|ref|YP_495980.1| hypothetical protein Saro_0699 [Novosphingobium aromaticivorans DSM
12444]
gi|87134404|gb|ABD25146.1| protein of unknown function DUF218 [Novosphingobium aromaticivorans
DSM 12444]
Length = 182
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
F L + +I + +GFI F ++ + + IVVLTG RI A LL+ G
Sbjct: 6 IFRRLLSLLMIAWALGFIWFAVFLPR-PAAEPARTDGIVVLTGGSGRIPHALRLLQTGAG 64
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
K+ +SGV V + + L CCI +GY A++T NA E++ W + N V
Sbjct: 65 RKLLVSGVDREVRPREFAVEYDVPSRLMTCCIVLGYDAVDTRSNAVESARWMQTNRIRSV 124
Query: 123 LIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+VT D+HM R +L + + + ++S R+L IEY K L+
Sbjct: 125 RLVTTDWHMRRAAFDLAQEAPKDLVIVEDAVVSR-----------PSFRILFIEYNK-LV 172
Query: 182 LSIQLSL 188
+ L
Sbjct: 173 ARLAAWL 179
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHI--PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + F + F F+ + + IVV TG R+ LL + +K+ I
Sbjct: 26 ILVAFMLASFQHFVLTLPRGETDFTKLDHTDGIVVTTGGQQRLVEGLNLLVSGTTDKVLI 85
Query: 68 SGVHHSVSKDILLQKIPIRQDLAE---CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SGV V+K +L+Q++ + CC+++ Y AL+T GNA A AW + N + +
Sbjct: 86 SGVGKGVNKAVLVQELNLDDQQVSALFCCVELEYGALDTRGNALAARAWIDLNGLKSIRL 145
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT +YHMPR + R V + + + L+ I+R+L EY K + I
Sbjct: 146 VTANYHMPRAEIVFSRAIPNVDIHQWAVSPNALDVERWWQDPMIIRLLTREYAKYVAEII 205
Query: 185 QL 186
+L
Sbjct: 206 RL 207
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
M+ ++ GF FI+ + + P IV LTG R++ LL
Sbjct: 43 MKRLLLTCLALGGLWLAGFAWFIQDASKASVTA-PVCDGIVALTGGEQRVDTGITLLRGG 101
Query: 61 IGEKIFISGVHHSVSKDILL--QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G + ISGV V+ +L Q+ + LAE I +G +A +T GNA E + WA N+
Sbjct: 102 YGHLLLISGVGPHVTLQHILHLQQESLSSPLAER-ITLGRRATSTIGNAHETAQWARDNH 160
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
H +L+VT YH+ R LE+ R+ + +PYP++ L+ + L ++ EY K
Sbjct: 161 LHRLLVVTAGYHIRRAVLEIHRVAPDLALVPYPVVPLALQAP---LSRRTLFLMFREYNK 217
Query: 179 ILLLSI 184
L I
Sbjct: 218 FLGAEI 223
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
Y L ++ + +GF F + Q + S A++V TG P RI + ++LE +++
Sbjct: 6 YLLAASVLVWALGFFWFAAALPQ--PAEELSTDAVIVPTGGPGRIAQGLQVLEQGQAQRM 63
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++GV V++D + + + +CCI +G +A++T NA E + W N+ + +V
Sbjct: 64 LVTGVDPEVTRDEFAAEFEVDEARMDCCITLGSEAVDTRSNATETAEWVAANDITSLRLV 123
Query: 126 THDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R EL R +V + + S L L +EY K++ I
Sbjct: 124 TTDWHMRRAAGELDRELPSSVTVVRDAVPSQ-----------PSLASLFLEYHKLIASFI 172
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQM----HIPDHPSVSA---IVVLTGEPIR-IER 52
MR+ + + GF F+ + + S A +V+LTG R I+
Sbjct: 1 MRFVLKIAALMGLLCAAGFFVFVAALPRSSNEQAALRSLSADARTGMVILTGGAGRRIQH 60
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+L G+++ ISG H V K+ L + +D CC+D+G +A T GNA EA
Sbjct: 61 GLDLFAQGYGDRVLISGTHPLVDKEDL--EGLGVRDSLHCCVDLGPRARTTIGNALEARD 118
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
WA + + +L+VT D+H+PR LEL+ + + I + + + + RVL
Sbjct: 119 WARRRGYDTILLVTSDFHLPRALLELEAVAPELTVIGIAVDTRSAPSANWMRSPSAWRVL 178
Query: 173 LIEYLKILLLSIQLS 187
EY+K +L +
Sbjct: 179 AEEYIKYILAWTRHR 193
>gi|148555918|ref|YP_001263500.1| hypothetical protein Swit_3011 [Sphingomonas wittichii RW1]
gi|148501108|gb|ABQ69362.1| protein of unknown function DUF218 [Sphingomonas wittichii RW1]
Length = 177
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+I GF++F ++ Q PD + IVV+TG R+ER LLE + +++ ISG V
Sbjct: 13 WIAGFMAFALFLPQ-PAPDGIATDGIVVMTGGRGRVERGLRLLEAKRAKRLLISGADRRV 71
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
L + L ECC+D+G+++++T NA EA+ W + + + +VT D+HM R
Sbjct: 72 RPHELAAQFKAPMALVECCVDLGHESVDTRSNAAEAADWIARRRYRSIRLVTSDWHMVRA 131
Query: 135 FLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+L+ ++ + + + + L+ EY K LL +
Sbjct: 132 RFDLRNATGDKLEIVADAVPTEPGLVD-----------LVREYNKYLLRRV 171
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
+ + + + +GF +F+ + H ++ + AIVV TG RI+R LL+ +
Sbjct: 1 MLRLIGLVALGWCLGFAAFMLSLP--HPLENNTTDAIVVPTGGAGRIDRGIALLQAHQAK 58
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ++GV V L + L CCID+G +A++T NA+E + W ++ + V
Sbjct: 59 RMLVTGVAPGVRPIDLARTYRTAPSLFSCCIDLGLEAVDTRSNAEETARWVREHGYRTVR 118
Query: 124 IVTHDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+VT D+H+PR +EL + V + + S L L+ EY K++L
Sbjct: 119 LVTSDWHLPRARMELVAALGPQVVVLGDGVPSE-----------PRLGTLVNEYNKLILR 167
Query: 183 SIQLSLST 190
+++L T
Sbjct: 168 --RIALWT 173
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + + GF+ F + A++VLTG P RI R E++E + +++
Sbjct: 4 RLLAAIFLVYAFGFLGFAMTLP--APAAKTETDAVIVLTGGPGRIARGLEVVEQNMAKEM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
F+SGV V + ++ + L +CC+ +GY A++T NA E + W ++ F +V
Sbjct: 62 FVSGVDPEVKPNEFAEQFEVSSRLMDCCVTLGYLAVDTRSNAGEVAQWMKEKEFTSARLV 121
Query: 126 THDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T ++HM R + E+ + + ++SH L L +EY K+L +
Sbjct: 122 TTNWHMARAYSEVAGTLPAGISIVKDAVVSH-----------PDLATLFLEYNKLLASEV 170
Query: 185 QLSLS 189
L
Sbjct: 171 SQGLP 175
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 13/188 (6%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W + I + GF F + I VLTG P R++ LL
Sbjct: 14 RLWLLPALLAILVVAGFALFTGQSRARPELPLRQTDGIAVLTGGPQRVDAGLRLLAEGHA 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDL---AECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ ISG + + L ++ + L + +G +A +T GN QE + WAE
Sbjct: 74 RALIISGTGRDATLEELARRAGLPDPLPEGFAARVTLGREATSTRGNGQEVAEWAEARQI 133
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ +VT +HMPR LEL+R V +P+P+ + +LL EY K
Sbjct: 134 GSLRVVTAAFHMPRALLELRRTLPGVALVPHPVQAAGPRPG----------LLLREYGKF 183
Query: 180 LLLSIQLS 187
+ + LS
Sbjct: 184 IGAMLGLS 191
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W + ++ + +GF+ F + Q A++V TG RI+R E+L+
Sbjct: 3 WRLFLLVVVAYALGFMWFAAALPQPRFEGE--TDAVIVPTGAAGRIDRGLEVLDGGKARM 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + + CC+ +G+ A++T GNA E + W +N + +
Sbjct: 61 MLVTGVDPEVRPAEFAAEFEVSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRL 120
Query: 125 VTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT D+HM R EL++ ++ + + S L +L +EY K+L
Sbjct: 121 VTTDWHMRRASGELRQKLPTNIRIVEDAVASE-----------PSLGILFLEYNKLLATW 169
Query: 184 I 184
Sbjct: 170 A 170
>gi|209545186|ref|YP_002277415.1| hypothetical protein Gdia_3070 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532863|gb|ACI52800.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ GF F R + P IV LTG RIE + LL G ++ ISGV
Sbjct: 31 WGAGFAWFFRDALR-PPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHA 89
Query: 75 SKDILL---QKIPIRQDLAECC---IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 90 TTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 149
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E++R + PYPI L+ ++ +R++ EY K ++ S+ L+
Sbjct: 150 YHIRRATMEIRRTVPGIVLYPYPIQPPALQAP---LRVASVRLMATEYDKWIMASLGLTR 206
Query: 189 STQ 191
Sbjct: 207 DMD 209
>gi|162149067|ref|YP_001603528.1| hypothetical protein GDI_3297 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787644|emb|CAP57240.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 197
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ GF F R + P IV LTG RIE + LL G ++ ISGV
Sbjct: 15 WGAGFAWFFRDALR-PPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHA 73
Query: 75 SKDILL---QKIPIRQDLAECC---IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 74 TTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E++R + PYPI L+ ++ +R++ EY K ++ S+ L+
Sbjct: 134 YHIRRATMEIRRTVPGIVLYPYPIQPPALQAP---LRVASVRLMATEYDKWIMASLGLTR 190
Query: 189 STQ 191
Sbjct: 191 DMD 193
>gi|296116632|ref|ZP_06835242.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
gi|295976844|gb|EFG83612.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
Length = 227
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
V ++ + G F+R ++ V LTG RIE + +L+ ++ ISG
Sbjct: 28 VLIMSWAAGLAWFVRDARRPPRMPP-PCDGAVALTGGQGRIEASLQLMAQHRARRLLISG 86
Query: 70 VHHSVSKDILLQKIPIRQDLAEC-CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L + P L +G +A +T GNA E + W + H +++VT
Sbjct: 87 VDPHATLGDFLTRAPRVLPLEVWLRTTLGRQATSTLGNADETAQWVRAQDIHSLIVVTAG 146
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E+ R V P+ + L ++ R+L++EY K LL I +
Sbjct: 147 YHIRRAMMEIARAAPGVTLYPFAVQPPALLHP---RRLATWRLLVVEYDKWLLACIDTAR 203
Query: 189 STQT 192
T+
Sbjct: 204 WTRP 207
>gi|103488367|ref|YP_617928.1| hypothetical protein Sala_2890 [Sphingopyxis alaskensis RB2256]
gi|98978444|gb|ABF54595.1| protein of unknown function DUF218 [Sphingopyxis alaskensis RB2256]
Length = 176
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ + + +++GF F + AIVV+TG P RI+RA E LE +++
Sbjct: 4 RLISLLFLVWVLGFAWFALLLPLPA--PPQKTDAIVVVTGGPGRIDRALERLEAGDAKRL 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV V L + L +CCI +G+ A +T NA E +AWA++ + + +V
Sbjct: 62 LISGVAREVKPRELAAEYGRPVALFDCCIALGFDAEDTRSNATEVAAWAKRRKYKSIRLV 121
Query: 126 THDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
T D+HM R E+ + + V + + S L L EY K
Sbjct: 122 TTDWHMRRAEYEIGRAVGRDVTIVTDAVRSQ-----------PNLATLFREYHKY 165
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + P AIVVLTG R+E L G+K+F+ GV SV K
Sbjct: 22 FVDFVYKTFSLS-PRDTQADAIVVLTGGRGRVEEGVRLYRAGQGKKLFLIGVDPSVKKRE 80
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
L Q E + + + NT NA A K+ + ++T YHM R+ +
Sbjct: 81 LFQGDG------EGGVYLEQNSRNTLENAIYARDLIMKHKVRSIKLITSRYHMKRSTILF 134
Query: 139 QRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ V P+P+ S +L+E ++L E+ K +L
Sbjct: 135 RNALPRYVAIYPHPVDSSNLKEQ-WWRHSGSFKLLFSEFYKYCILR 179
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ + + + LI + F+ F+ + AIVVLTG R+E +L
Sbjct: 4 LKVLFSLIVLILIVLSVLFVDFVYKTFSLS-QRDVKTDAIVVLTGGRGRVEEGVKLYRGG 62
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+ +F+ GV V K L + + + + NT NA A K+
Sbjct: 63 RGKLLFLIGVDPLVKKHELYRGAGAEN------VYLEKTSRNTLENAIYARDMITKHRVS 116
Query: 121 HVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ ++T YHM R+ + + + P+P+ S +L+E ++L E+ K
Sbjct: 117 SIKLITSRYHMKRSTILFRNALPKDIAIYPHPVDSSNLKEE-WWNHKGSFKLLFSEFYKY 175
Query: 180 LLLSI 184
+L +
Sbjct: 176 CILRL 180
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 1 MRYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELL 57
M F+ GLF + +IF ++ + F+ + + + AIVVL G R+E L
Sbjct: 1 MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLF 60
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ G+ +F+ GV V K L Q+ + + + NT NA ++
Sbjct: 61 RAKKGKYLFLIGVDPMVRKQELFQERKGES--LADRVVLENASRNTLENALYGREIIDRK 118
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
+ + ++T YHM R L + + P+P+ + +L+E + R+L E+
Sbjct: 119 DIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKE-AWWRDQGSFRLLFSEF 177
Query: 177 LKILLLSIQLSLST 190
K L ++
Sbjct: 178 YKYCLFRFFFLFAS 191
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ + + + LI + F+ F+ + AIVVLTG R+E +L
Sbjct: 4 LKGLFSLMVLILIVLSVLFVDFVYKTFSLS-QRDVHADAIVVLTGGRGRVEEGVKLYRAG 62
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+ +F+ GV V K L Q + + + NT NA A K+
Sbjct: 63 QGKLLFLIGVDPLVKKHELYQGAGAEN------VYLEKTSRNTLENAIYARDMIMKHKVS 116
Query: 121 HVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ ++T YHM R+ + + V P+P+ S +L+E ++L E+ K
Sbjct: 117 SIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVDSSNLKEE-WWNHKGSFKLLFSEFYKY 175
Query: 180 LLLSI 184
+L +
Sbjct: 176 CILRV 180
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F P AIVVL G R+E L + G +F+ GV +V K
Sbjct: 22 FVDFTYKTFSAR-PRQVQADAIVVLAGGKGRVEEGVRLFRERRGTWLFLVGVDPTVRKSD 80
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
L + P + + + NT NA ++ VL++T YH+ R+ +
Sbjct: 81 LYRPKPGDPP--ADNVVLEKLSRNTLENAIYGRDILAEHKVRSVLLITSRYHLKRSAILF 138
Query: 139 QRIN-STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ V PYP+ S +++E + R+L E+ K + +
Sbjct: 139 RNALAPDVALYPYPVDSSNVKEE-WWHHLGTFRLLFSEFYKYCIFRV 184
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 5/190 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R + L + L+ + F+ F + AIVVL G RIE L
Sbjct: 5 RGIFSLLVISLVVIAVLFVDFTYKTFSLR-QRDVKSDAIVVLAGGRGRIEEGVRLYRENR 63
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+F+ GV +V K L + + + + + NT NA A ++N
Sbjct: 64 ARWLFLIGVDPAVRKGELFTERRGERSGEG--VFLENVSRNTLENALYAREMIVRHNVSS 121
Query: 122 VLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ ++T YHM R L +++ + P+P+ S +L+E R+L E+ K
Sbjct: 122 IKLITSRYHMKRATLIFRQVLPKDIAIYPHPVDSKNLKEE-WWSHGGSFRLLFSEFYKYC 180
Query: 181 LLSIQLSLST 190
L + ++
Sbjct: 181 LFRLFFLFAS 190
>gi|118580810|ref|YP_902060.1| hypothetical protein Ppro_2396 [Pelobacter propionicus DSM 2379]
gi|118503520|gb|ABL00003.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 4/153 (2%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
AIVVL G R++ L G +F GV +V + L + P
Sbjct: 35 REVRADAIVVLAGGKGRVDEGVRLFRQGKGHWLFFIGVDPTVRRSDLYRPRPGDPP--AS 92
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYP 151
+ + + NT NA + N +L++T YHM R + L+ V PYP
Sbjct: 93 GVILEKASRNTLENAVYGRDVIMERNVRSILLITSRYHMKRASILLRNALPKDVAIYPYP 152
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ + +L+E + +L E+ K +
Sbjct: 153 VDTANLKE-AWWSHRSSFHLLFGEFYKYCMFRA 184
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 4/162 (2%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ AIVVL G RIE L +F+ GV SV K L ++ + +
Sbjct: 38 NCDAIVVLAGGRGRIEEGSRLYRENHARWLFLIGVDPSVRKSDLFRERKGERSGEG--VY 95
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIIS 154
+ + NT NA A N + ++T YHM R L + + + P+P+ +
Sbjct: 96 LEKVSRNTLENALYAREMIVGRNIDSIELITSRYHMKRATLIFRHVLPKDIAIYPHPVDT 155
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
+L+E R+L E+ K L + +
Sbjct: 156 KNLKEE-WWNHSGSFRLLFSEFYKYCLFRVFFLFAPTELQSA 196
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 9/195 (4%)
Query: 1 MRYFWYG----LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
M F+ G L V LI + F+ F + + AIVVL G R+E L
Sbjct: 1 MALFFRGIISLLIVVLIIVAVLFVDFAYKTFSLR-QRDVTTDAIVVLAGGRGRVEEGVRL 59
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ G +++ GV V K L + + + + + NT NA +
Sbjct: 60 FRERKGTYLYLIGVDPVVKKRDLFRDREGER--LADRVFLENLSRNTLENALYGREIIMR 117
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ ++T YHM R L +++ + P+P+ + +L+E R+L E
Sbjct: 118 KEVRSIRLITSRYHMKRATLLFRQVLPRDIAIYPHPVDTTNLKER-WWDDKGSFRLLFSE 176
Query: 176 YLKILLLSIQLSLST 190
+ K L ++
Sbjct: 177 FYKYCLFRFFFLFAS 191
>gi|157965010|ref|YP_001499834.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
gi|157844786|gb|ABV85287.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
Length = 171
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE LL+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGSALLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + LL++ R + + I K ++ E N ++A + N +++V H
Sbjct: 65 TGIESTEQLKNLLKE---RNVIEQQVILAPSKIMSEEDNIKKAVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L+++ + + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKVIHSSHNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|67459774|ref|YP_247398.1| hypothetical protein RF_1382 [Rickettsia felis URRWXCal2]
gi|67005307|gb|AAY62233.1| Uncharacterized conserved protein [Rickettsia felis URRWXCal2]
Length = 174
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ G + + Y+ + + + +A++V G +IE LL+
Sbjct: 2 IRKFLLTILAIFALWVGG-LGYYLYLINSYKLNSNTTNAVIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL++ R + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESTEQLKNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+++V H+Y+MP +L++ + +PY + S + VLL Y
Sbjct: 118 SIILVEHNYNMPFMLNKLEKAIPSSNNIYIVPYLVFSKQKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|239946686|ref|ZP_04698439.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920962|gb|EER20986.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 171
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + +I+GF + Y+ + + + +AI+V G +IE +L+
Sbjct: 2 IRKFLLTILAIFALWIVGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAMLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL++ + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAGQLKNLLKE---HSVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHD 156
+++V H+Y+MP +L++ + + YP+ +
Sbjct: 118 SIILVEHNYNMPFMLNKLKKAIPSSNNIYIVSYPVFPNK 156
>gi|15893279|ref|NP_360993.1| hypothetical protein RC1356 [Rickettsia conorii str. Malish 7]
gi|229587249|ref|YP_002845750.1| hypothetical protein RAF_ORF1242 [Rickettsia africae ESF-5]
gi|29839740|sp|Q92FX1|Y1356_RICCN RecName: Full=Uncharacterized protein RC1356
gi|15620500|gb|AAL03894.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022299|gb|ACP54007.1| Unknown [Rickettsia africae ESF-5]
Length = 171
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|238651121|ref|YP_002916979.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
gi|238625219|gb|ACR47925.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
Length = 171
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIISEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHHYLMSIL 170
>gi|157829194|ref|YP_001495436.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933919|ref|YP_001650708.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
gi|157801675|gb|ABV76928.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909006|gb|ABY73302.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
Length = 171
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFVGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|34581055|ref|ZP_00142535.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262440|gb|EAA25944.1| unknown [Rickettsia sibirica 246]
Length = 171
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFFKQKYD-----------VLLKSYHRYLMSIL 170
>gi|157826367|ref|YP_001494087.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
gi|157800325|gb|ABV75579.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
Length = 174
Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ G I + Y+ + + + +AI+V G +IE LL+
Sbjct: 2 IRKFLLTILAIFALWVGG-IGYFLYLINSYKFNSNTTNAIIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI G+ + LL++ R + + I K ++ E N ++A + N
Sbjct: 61 YAPILFIIGIESTEQLRNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLA 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
V++V ++Y+MP +L++ + + YP+ + VLL Y
Sbjct: 118 SVILVEYNYNMPFMLNKLEKEIPSSNNIYIVQYPVFFKQKYD-----------VLLKSYN 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|51474043|ref|YP_067800.1| hypothetical protein RT0866 [Rickettsia typhi str. Wilmington]
gi|51460355|gb|AAU04318.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 174
Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ F + V ++ GF + Y+ + + + +AI+V G +IE LL+
Sbjct: 2 IKKFLLIILVIFTLWVGGFC-YYLYLINSYKLNSNTTNAIIVFAGGGHKIETCIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL + + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAEHFKNLLME---HNVIEQQVILAPNKIMSEEDNIKKAIDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+++V H+Y++P +LQ+ V +PYP+ S + VLL Y
Sbjct: 118 FIILVEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFSTQKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|15604704|ref|NP_221222.1| hypothetical protein RP875 [Rickettsia prowazekii str. Madrid E]
gi|7388444|sp|Q9ZC92|Y875_RICPR RecName: Full=Uncharacterized protein RP875
gi|3861399|emb|CAA15298.1| unknown [Rickettsia prowazekii]
gi|292572540|gb|ADE30455.1| hypothetical protein rpr22_CDS854 [Rickettsia prowazekii Rp22]
Length = 174
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ GF + Y+ + + + +AI+V +IE LL+
Sbjct: 2 IRKFLLIILAIFTLWVGGF-GYYLYLINSYKLNSNTTNAIIVFADGGHKIETCMALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL K + + I K ++ E N +EA + N
Sbjct: 61 YAPILFITGIESTERFKNLLMK---HNVIEQQVILAPNKIMSEEDNIKEAINFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+ +V H+Y++P +LQ+ V +PYP+ S + VLL Y
Sbjct: 118 LITLVEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFSKPKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTGEPIRIERAFELLE 58
R FW F+ + + F+ + V+ I PS VVLTG R+ F+LL
Sbjct: 4 RSFWALAFLSAVV-LYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDLLV 62
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
NQ +K+ ISGV+ + ++ P +L+E + + ++ T GNAQ++ E
Sbjct: 63 NQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEALK 122
Query: 119 FHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+L+VT HM R++ + + + II E + + L+ L
Sbjct: 123 CRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGGRFESSVWESGFEALKSLF 178
>gi|91204866|ref|YP_537221.1| hypothetical protein RBE_0051 [Rickettsia bellii RML369-C]
gi|157826504|ref|YP_001495568.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
gi|91068410|gb|ABE04132.1| unknown [Rickettsia bellii RML369-C]
gi|157801808|gb|ABV78531.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
Length = 174
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + + GF+ + Y+ + P + +AI+V G +IE LL+
Sbjct: 2 IRKIALTILTIFAIWASGFV-YYLYLVNSYKPSSNTANAIIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ S LL++ + L + I + ++ E ++AS + K N
Sbjct: 61 YAPILFITGIETSDQLKNLLKENNV---LEQQVILAPNQIMSEEDYIKKASDFILKYNIT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS----TVQFIPYPIISHD 156
V +V ++Y +P L S + PYP+I+
Sbjct: 118 SVRLVAYNYDIPSIVNNLTTAISSSNNNIYIAPYPVIAKQ 157
>gi|301165835|emb|CBW25408.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 212
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 19/203 (9%)
Query: 1 MRYFWYGLFVCLIFFIMG------FISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIER 52
+RY +F+ L+ I+ F+ R Q + S IVV TG+ RI
Sbjct: 16 LRYLQNIVFISLVSIILYAIMSLIFVLIARNYNQETEKTFYNRSPDLIVVFTGDSGRIPL 75
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-S 111
A +L + IFI+GV+ S D LL+ + I +++ + I Y A NT N
Sbjct: 76 AVQLAKKYKQSNIFITGVYSKNSVDSLLRPLKIDEEIDTNLLTIDYLARNTVENVISTLR 135
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRIN---STVQFIPYPIISHDLEENSSIFKIKI 168
E+ +++++HDYH+ R L ++ Q Y + S ++
Sbjct: 136 HLRERKGNKKIIVISHDYHVMRIKLIFNKLMEADDDYQLYFYSVESD-------FDNMRN 188
Query: 169 LRVLLIEYLKILLLSIQLSLSTQ 191
++++ E K + L L +
Sbjct: 189 IKIVAKEVYKWIRTYGFLMLWSP 211
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 2 RYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVV----LTGEPI-----RI 50
R+ W G+ +CLIF ++ F + + DHP +A+V+ +P R+
Sbjct: 4 RWLWSGVILCLIFALLIIPFWVQASRYDDVRVADHPRDAALVLGAALWDSQPSPALRERL 63
Query: 51 ERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L + I SG +S+ +++ + Q + + + ++ NT+ N Q
Sbjct: 64 QMALSLYHKGQVQWIICSGGVGDDGISEAEGMKRYLMEQGVPPKDLLLEEESTNTKENLQ 123
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTF---------LELQRINSTVQFIPY 150
+ + N+ ++ +VTHDYHM R+ E ++S+V F PY
Sbjct: 124 YSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPAPVHSSVLFTPY 174
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 7/189 (3%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLEN 59
+R G V + + R++ P +VVL+G+ R+E AF L +
Sbjct: 32 LRNLALGTLVLAAVVWLSLPAVGRFLVVADKPAP--AEVLVVLSGDRGERLEYAFRLYQE 89
Query: 60 QIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +++ +SG + +++ LL++ + + E I + +A NT NA + E
Sbjct: 90 GLADRLLLSGGPLYADLTEADLLRRHALMLGVPEYKIIMEPRATNTYQNALYSREMMEYY 149
Query: 118 NFHHVLIVTHDYHMP--RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++++ YHM R + S ++ + P+ + RV+L E
Sbjct: 150 GLDSAIVISSPYHMRRVRALFDEVYRGSDIRLVYLPVEDSWFDPERWWESAAGRRVVLAE 209
Query: 176 YLKILLLSI 184
YL++ +L +
Sbjct: 210 YLRLTMLVL 218
>gi|167957605|ref|ZP_02544679.1| hypothetical protein cdiviTM7_02994 [candidate division TM7
single-cell isolate TM7c]
Length = 204
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 6/155 (3%)
Query: 36 SVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLA 90
V AIV ++G R + A +L +N + SG S ++K +++ +
Sbjct: 46 RVDAIVAVSGGDTDARTDEAVKLYKNGWSNLLIFSGAAADKTGPSNAKAMRKHALKKGVP 105
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ-RINSTVQFIP 149
+ I I + T+ NA+ + + +++VT YH R +E + V+ I
Sbjct: 106 DSAIVIEENSNTTQENARLSRNVFSERKISRIILVTSAYHQRRAGIEFRLAAGGNVEVIN 165
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+P+ N + + E +KI+
Sbjct: 166 HPVAQDKQWSNWWWISPNGWWLAMSEIIKIIATYA 200
>gi|163857424|ref|YP_001631722.1| hypothetical protein Bpet3112 [Bordetella petrii DSM 12804]
gi|163261152|emb|CAP43454.1| conserved hypothetical protein [Bordetella petrii]
Length = 252
Score = 97.6 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 27/208 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
+ ++ G + + + + P+ AIVVL G
Sbjct: 44 WVLAWSLPATSLWLGG--ALESRYPHLPVAELPTADAIVVLGGNTANGRANWFLPYDKET 101
Query: 49 ---RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A +L + K+ +SG VS+ + + +Q + E + + + T
Sbjct: 102 AVVRVDTAIKLYQAHRAPKVVLSGGALEGDVSEARGMAFLMKQQGVPEDALLLENSSRTT 161
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLEEN 160
NA +++ F +L+VT HMPR + P ++ D +
Sbjct: 162 YENAMLTEEELKEHGFGKILLVTSALHMPRAMAAFSKQGVAAIPASTPPQIVLPPDGSVS 221
Query: 161 SSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ ++ L R ++ EY +L+ ++
Sbjct: 222 PWLPHMRTLDASRSIIKEYAGLLVYWLR 249
>gi|294498420|ref|YP_003562120.1| hypothetical protein BMQ_1655 [Bacillus megaterium QM B1551]
gi|294348357|gb|ADE68686.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 198
Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 8/173 (4%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + F F + + I+VL+G+ R+E+ EL + + +S
Sbjct: 13 IFMLGLGIIFFLFAGK-ELVVNEKPVKSDVIIVLSGDNDRLEKGIELYKKGYAAHLILS- 70
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ ++ + + E I + A +T NA+ +F ++V+ +Y
Sbjct: 71 ---NGQENNFYHQAKES-GIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNY 126
Query: 130 HMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HM R + +Q S +V EY+K++
Sbjct: 127 HMKRAEKNFNKEFKDTQIQLTYCSSGSRYYNPQRWWETALNRKVTYTEYVKLI 179
>gi|187478721|ref|YP_786745.1| membrane protein [Bordetella avium 197N]
gi|115423307|emb|CAJ49841.1| putative membrane protein [Bordetella avium 197N]
Length = 254
Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 27/208 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
+ ++ G + + P+ AIVVL G
Sbjct: 46 WVLVWSLPATSLWLGG--ALEHRYPYLEPDSAPTADAIVVLGGNTANGRANWFLPYDKDT 103
Query: 49 ---RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A +L K+ +SG +VS+ + ++ + + + + + NT
Sbjct: 104 AVVRVDTATDLYLADRAPKVVLSGGALEGNVSEAQGMAHRMRQRGVPDSALVLENASRNT 163
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLEEN 160
NA N+ VL+VT HMPR + P P + D +
Sbjct: 164 YENAALTEDTLRANHISKVLLVTSALHMPRAMAAFSKQGVEAIAAPTPPQIVPPTDGSLS 223
Query: 161 SSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ ++ L R ++ EY +L+ ++
Sbjct: 224 PWMPDMRTLDASRSIIKEYAGLLVYWLR 251
>gi|295703757|ref|YP_003596832.1| hypothetical protein BMD_1626 [Bacillus megaterium DSM 319]
gi|294801416|gb|ADF38482.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 198
Score = 95.7 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 8/173 (4%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + F F + + I+VL+G+ R+E+ EL + + +S
Sbjct: 13 IFMLGLGIIFFLFAGK-ELVVNEKPVKSDVIIVLSGDNDRLEKGIELYKKGYASHLILS- 70
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ ++ + + E I + A +T NA+ +F ++V+ +Y
Sbjct: 71 ---NGQENNFYHQAKES-GIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNY 126
Query: 130 HMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HM R + +Q S +V EY+K++
Sbjct: 127 HMKRVEKNFNKEFKDTQIQLTYCSSGSRYYNPQRWWETALNRKVTYTEYVKLI 179
>gi|293604449|ref|ZP_06686856.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817326|gb|EFF76400.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + D P+ AIVVL G
Sbjct: 44 LLWALAWSLPVTSLWLGG--ALENRYPHLAPADSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A +L K+ +SG VS+ + +Q + E + + +
Sbjct: 102 DTAVVRVDTAAQLYLAGRAPKVLLSGGALEGDVSEARGMAHAIRQQGVPESALILENSSR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA + VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDALKSRGITKVLLVTSALHMPRAMAAFSKQGVEAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWVPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 35/219 (15%)
Query: 5 WYGLFVCLIFFIMG--FIS--FIRYVKQMHIP----DHPSVS-AIVV------------- 42
+ +CL ++ FI+ + +++ + P D P V AIV+
Sbjct: 40 FLFFIICLFLYLASSSFIANRLVTELEKEYPPVSLQDAPKVDVAIVLGGMIQTISSVKAR 99
Query: 43 --LTGEPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCID 95
LT RI A L + +KI +G + + L + + I + E I
Sbjct: 100 PELTDSADRITDAIRLYKAGKVKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDII 159
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + NT NA E + NF L++T +HM R+ Q+ N V P S
Sbjct: 160 LENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSF 219
Query: 156 DLEEN------SSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ + S + + + + E++ + + L
Sbjct: 220 NTDSGAFELYLPSAGYLDLTTLSIKEWVGYFVYRTKSYL 258
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 92.2 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGF------ISFIRYVKQMHI----PDHPSVSAIVVLTG----E 46
+R + + V + + + + + ++Q+H + P+ AIVVL G
Sbjct: 32 LRKTAFVIAVAGLSWALFWSLPASSLWAGGRLEQLHPYEQAANAPTAQAIVVLGGHTANG 91
Query: 47 PI-------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
RI++A L + Q I +SG +VS+ ++ + D+ E
Sbjct: 92 RQNWFEPYDKATAIARIDKAANLYKAQRAPLIVVSGAALEGNVSEAQIMANALKQHDIPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
I + ++ T NA + + + ++L+VT HMPR ++ P
Sbjct: 152 SAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTSALHMPRAMAVFKKQGIAAIAAPLA 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
++ D + ++ L R ++ EY+ +L+ ++
Sbjct: 212 PQIVVPDDPGFSFWQPDMRSLAASRSIVKEYVGLLVYWVR 251
>gi|33596348|ref|NP_883991.1| hypothetical protein BPP1716 [Bordetella parapertussis 12822]
gi|33602366|ref|NP_889926.1| hypothetical protein BB3392 [Bordetella bronchiseptica RB50]
gi|33566117|emb|CAE37017.1| conserved hypothetical membrane protein [Bordetella parapertussis]
gi|33576805|emb|CAE33884.1| conserved hypothetical membrane protein [Bordetella bronchiseptica
RB50]
Length = 254
Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + P+ AIVVL G
Sbjct: 44 LLWALAWSLPATSLWLGG--ALESRYPHLPPDQSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A EL + K+ +SG +S+ + + + E + + +
Sbjct: 102 ETAVVRVDTATELFQAGRAPKVVLSGGALEGDISEARGMAYRMRQHGVPESALILENASR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA ++ VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWLPDQRSFDASRSIIKEYAGLFVYWLR 251
>gi|33593317|ref|NP_880961.1| hypothetical protein BP2323 [Bordetella pertussis Tohama I]
gi|33572673|emb|CAE42596.1| conserved hypothetical membrane protein [Bordetella pertussis
Tohama I]
gi|332382726|gb|AEE67573.1| hypothetical protein BPTD_2282 [Bordetella pertussis CS]
Length = 254
Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + P+ AIVVL G
Sbjct: 44 LLWALAWSLPATSLWLGG--ALESRYPHLPPDQSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A EL + K+ +SG +S+ + + + E + + +
Sbjct: 102 ETAVVRVDTATELFQAGRASKVVLSGGALEGDISEARGMAYRMRQHGVPESALILENASR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA ++ VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWLPDQRSFDASRSIIKEYAGLFVYWLR 251
>gi|317407644|gb|EFV87583.1| hypothetical protein HMPREF0005_04608 [Achromobacter xylosoxidans
C54]
Length = 254
Score = 91.1 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGF----------ISFIRYVKQMHIPDHPSVSAIVVLTGEPI-- 48
+R L + + + + + + + + P+ AIVVL G
Sbjct: 32 LRKTGGALILAGLLWALAWSLPVTSLWLGGALENRYPHLPPAESPTADAIVVLGGNTANG 91
Query: 49 ---------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
R++ A +L K+ +SG VS+ + +Q + E
Sbjct: 92 RANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVVLSGGALEGDVSEARGMAHAIRQQGVPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T NA + VL+VT HMPR + P P
Sbjct: 152 SALILENASRTTYENAALTEDQLKTRGIGKVLLVTSALHMPRAMAAFSKQGVIAIAAPAP 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ D N + + R ++ EY + + ++
Sbjct: 212 PQIVAPADGSLNPWLPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|311105207|ref|YP_003978060.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
gi|310759896|gb|ADP15345.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
Length = 254
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV----------KQMHIPDHPSVSAIVVLTGEPI-- 48
+R L V + + + + + + + P+ AIVVL G
Sbjct: 32 LRKTGGALIVAGLLWALAWSLPATSLWLGGALESRYPHLAPSESPTADAIVVLGGNTANG 91
Query: 49 ---------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
R++ A +L K+ +SG VS+ + +Q + E
Sbjct: 92 RANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVLLSGGALEGDVSEARGMAHAIRQQGVPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T NA + VL+VT HMPR + P P
Sbjct: 152 TALILENSSRTTYENAALTEDQLKSRGIGKVLLVTSALHMPRAMAAFSKQGVEAVAAPAP 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ D + + R ++ EY + + ++
Sbjct: 212 PQIVAPADGSLPLWLPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|254423832|ref|ZP_05037550.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191321|gb|EDX86285.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 263
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 78/235 (33%), Gaps = 54/235 (22%)
Query: 3 YFWY-----GLFVCLIFFIMGF---------ISFIRYVKQMHIPDHPSVSAIVVLTGE-- 46
+ W + L FI+ F + + P+ AIVVL G
Sbjct: 28 WLWRHPRRASGAIALALFILFFSSNPIVSNKLLSSLEWRYFPPDPVPTADAIVVLGGATV 87
Query: 47 --------------PIRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIR 86
RI A L K+ +SG S+ ++ +
Sbjct: 88 PAIAPRPWVEVSEAGDRILYAARLYNQGRAPKLILSGGRVQWRGGSDESEADDMKAFAMA 147
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
++ E I + +LNT NA + VL+VT HMPR+ Q++ +
Sbjct: 148 MNVPEADIILEETSLNTRQNAVNVKKILAAQSIDSVLLVTSAVHMPRSVAIFQKL--DID 205
Query: 147 FIPYP----IISHDLEENSSIFKIKILRVL------------LIEYLKILLLSIQ 185
IP P + + E + +IL +L + EY+ ++ ++
Sbjct: 206 VIPAPTDYLVTTPSDESGEITIEGRILSLLPRAEATGRFTRAMKEYVGFVIYRLR 260
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 88.0 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 38 SAIVVLTGE---PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
AIVVL G RI+ A L + I + + I G VS + +K+ + E +
Sbjct: 3 DAIVVLGGGKLSEGRIDEAIRLYKQGIAKYLIIVGGKEEVS--EMYKKVRSKIQNIEN-V 59
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ +L+T NA A EK N +LIVT ++H+ R
Sbjct: 60 YVDNNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIKRAL 100
>gi|188996942|ref|YP_001931193.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932009|gb|ACD66639.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 242
Score = 87.6 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 22/176 (12%)
Query: 32 PDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSK--DI 78
P + S IVVL G R+ F +L ++ I +SG +
Sbjct: 69 PKNISGDVIVVLGGGSYNTGILTEDSLKRVLTGF-VLHKRLNVPIILSGGSAITNLPESE 127
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
++ + + + I ++ +T NA +K + V++VT YHMPR+++
Sbjct: 128 AMKSLLAELGIDKKMIFTDVQSRDTLENAFFTKKICKKYGYKTVILVTSAYHMPRSYMTF 187
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVL------LIEYLKILLLSIQLSL 188
++ V IPYP ++ + + VL + EY+ + ++ S
Sbjct: 188 KQAGLNV--IPYPTDFKMDKKYTVYSYFPKMNVLQDSTKAIREYIGLFAYYLRFSF 241
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 87.6 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 10 VCLIFFIMGFISFIRYVKQM------------HIPDHPSVSAIVVLTGEP---------- 47
+ ++ F+ F ++ ++ + IP+ + IVVL G
Sbjct: 35 IFIVSFLSAFFIYLLSIEPVKDSLLRPLETKYPIPNKLNGDVIVVLGGGSYNTGILTEDS 94
Query: 48 -IRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ F +L ++ I +SG + +++ I + + I + +T
Sbjct: 95 LKRVLTGF-VLHKKLNLPIILSGGSAITNLPEAEVMKNILNELGVDKSMIYTDVNSRDTL 153
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
GNA EKN F +++VT YHMPR+ + Q+ V IPYP + +
Sbjct: 154 GNAFFVKKICEKNGFKRIILVTSAYHMPRSVIVFQKAGLDV--IPYPTDFKMDKRYTVYS 211
Query: 165 KIKILRVL------LIEYLKILLLSI 184
+ VL + EY+ ++ +
Sbjct: 212 YFPKMNVLQDSTKAIREYVGLIAYQL 237
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 20/176 (11%)
Query: 31 IPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
+P+ AIVVL G R+ A +L + G I +SG ++ +
Sbjct: 68 VPEKFQADAIVVLGGGSYSTGILKEDSMKRLLTAL-ILHKRTGLPIVLSGGAENLPDAEI 126
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ + + + + I ++ +TE NA ++ N+ V++VT YH+PR +
Sbjct: 127 MKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLVTSAYHLPRAVFLFK 186
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVL------LIEYLKILLLSIQLSLS 189
+ + IPYP + + + VL L EY+ +L L + L
Sbjct: 187 K--EGLSVIPYPTDFKRDLRYNLYSLLPKMSVLNDSVKALREYVALLSLRLPEWLP 240
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 75/199 (37%), Gaps = 32/199 (16%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------------IRIERAFELL 57
+ G + KQ P IVVL G R+ A L
Sbjct: 54 LAGDLLISSLEKQYPQPRTVQGDVIVVLGGGATQGTPDINGQGNLLGSAANRLLTAARL- 112
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
G I SG S ++ + Q+ + + I I ++LNT+ NA S
Sbjct: 113 HEATGLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDILIENRSLNTQQNAVYTSQIL 172
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDL-----EENSSIFKI 166
EK+ ++VT +HMPR LE QR VQ I YP + S L + + S +
Sbjct: 173 EKHQLTRPVLVTSAFHMPRAALEFQRA--GVQAIAYPTDYLASEKLSLYAGKLSPSAGAM 230
Query: 167 KILRVLLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 231 STTGTALKEYLGILALKLK 249
>gi|254481130|ref|ZP_05094376.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038925|gb|EEB79586.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 245
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 73/212 (34%), Gaps = 33/212 (15%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------------P 47
L+ C + F+ P V AIVVL G
Sbjct: 38 VWLYACSTALVADFLMASLEDDFRPKAMSVVPKVDAIVVLGGATRGDTYWSSMADLNAAA 97
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ A L + + + +SG + S+ L+ + L + + + ++L+T+
Sbjct: 98 DRLTHAVSLYKAKKAPLVLLSGGSTTGSRPEAEQLRDYMVLMGLPDRALLMERQSLDTQQ 157
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV--------QFIPYPIISHDL 157
NA+ ++ + + +L+VT YHM R +R V + + P + L
Sbjct: 158 NARYSALILQGRDVRRILLVTSAYHMSRAVPLFERQGFEVIPAPTDYQRLVGKPAVPRWL 217
Query: 158 E-ENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ EY+ L Q L
Sbjct: 218 PTADDLWRSTAAIK----EYVGFLYYRAQGWL 245
>gi|317485960|ref|ZP_07944815.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316922733|gb|EFV43964.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 185
Score = 84.5 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 14/194 (7%)
Query: 1 MRYFWYG----LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFE 55
M WYG L + + I + +P IVVL GE R+ A E
Sbjct: 1 MGQGWYGAIGKLAIAALLIGAVLIWRAEAWLHVDVPLE-HADVIVVLGGESGQRVIGAAE 59
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + K+F++G S ++++++ + C ++ +T NA E
Sbjct: 60 LYHQGVAPKVFVTG---SGDGGLIVRRLGMAGVPDAAC---ESQSRSTYENAVLTKKALE 113
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++ V++VT +H R + + V F +P+ + F+I + + E
Sbjct: 114 ASHPRSVMLVTSWFHSRRALAVFRDVWPEVTFGVHPVYAGATFTAR--FRIYEMGYIFSE 171
Query: 176 YLKILLLSIQLSLS 189
Y+K L ++ ++
Sbjct: 172 YVKTLWYMVRYGIA 185
>gi|239833683|ref|ZP_04682011.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821746|gb|EEQ93315.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 11/187 (5%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIG 62
+ C I F + + F + V + D IVV G P R +A L +
Sbjct: 2 MLLVVLPCAILFGIAAMFFSQPVLTLQ-DDGGRADVIVVPGGDGPPRAAQAARLWKEGRS 60
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQD-LAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + ++ + + + C ++ +T NAQ ++ +
Sbjct: 61 PVILVTGDGDCLYNKRIMVRNGVNPSAIFVEC-----QSGSTWQNAQFSAPVLREIRARS 115
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--I 179
L+VT+ YH R + ++FI PI D + ++ EY+K
Sbjct: 116 ALVVTNWYHSRRAIASFRAACPQMRFISSPIGGDDGR-PGFPATPADMELVAKEYVKLGW 174
Query: 180 LLLSIQL 186
L+S ++
Sbjct: 175 YLVSGRI 181
>gi|153010699|ref|YP_001371913.1| hypothetical protein Oant_3378 [Ochrobactrum anthropi ATCC 49188]
gi|151562587|gb|ABS16084.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 206
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 9/174 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIF 66
+ C + F + + F V + D IVV G P R A L + I
Sbjct: 6 ILPCAVLFGLVAMFFSEPVLTLQ-DDGGRADVIVVPGGDGPPRAAEAARLWKEGRSPVIL 64
Query: 67 ISGVHHSVSKDILLQKIPI-RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++G +S ++ + + + C ++ +T NA+ ++ + LIV
Sbjct: 65 VTGDGDCLSNKRIMVRKGVTPSAIFVEC-----QSGSTWQNARFSAPLMREIQARSALIV 119
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
T+ YH R + ++FI PI D + +++ EY+K+
Sbjct: 120 TNWYHSRRAIASFRAACPQMRFISSPIGGDDGR-PGFPTTPTDMELVVKEYVKL 172
>gi|78045108|ref|YP_360909.1| hypothetical protein CHY_2090 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997223|gb|ABB16122.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 203
Score = 82.6 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 17/196 (8%)
Query: 3 YFWYGLFVCLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRI 50
+ ++GL + + F +++ + + A+VVL+G R+
Sbjct: 8 FAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLGESTRERL 67
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L +N G + +SG + L+ K +++ + + + + NT N
Sbjct: 68 NLGINLWKNDYGRYLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSENTYENVL 127
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
+ +N + +L+VT YH R + YP + +L + +++
Sbjct: 128 LTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNATVV-YP--AGELPNARGLLRLRQ 184
Query: 169 LRVLLIEYLKILLLSI 184
V++ EYLK+L I
Sbjct: 185 TIVVVEEYLKLLYYFI 200
>gi|270157480|ref|ZP_06186137.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164131|ref|YP_003454269.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
gi|269989505|gb|EEZ95759.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857304|emb|CBJ11131.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
Length = 197
Score = 82.2 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 8 LFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVL-TGEPI----------RIERAF 54
+F+ + G F + ++ + I+VL T R++ A
Sbjct: 7 VFIFFLILSAGIYFSLALYIIRNAEKDEKKHADVIIVLGTKSYHGDKYNPCLVARVQHAV 66
Query: 55 ELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+L + K+ SG + S+ ++++I + ++E I + + +T N +
Sbjct: 67 DLYKANYAPKLLFSGGKDTKNGPSEAQVMKEIALHLGVSEQDILLESASASTYENLLFSE 126
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
F+ +L+VT +H+PR L Q++ V S ++ R
Sbjct: 127 KIVSAKKFNSILLVTEPFHLPRAILVAQKLGLKVS------GSPAIQSLCWQKNSYFSRH 180
Query: 172 LLIEYLKILLLSIQLSL 188
L E L I+ I+ L
Sbjct: 181 FLREPLAIIYYKIKNQL 197
>gi|147677433|ref|YP_001211648.1| hypothetical protein PTH_1098 [Pelotomaculum thermopropionicum SI]
gi|146273530|dbj|BAF59279.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 148
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 5/148 (3%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
I+ L G+ R A EL + +I +SG + + + + E I + K
Sbjct: 2 IIALGGDSERELYAAELYRRGLAPRIIMSGCGSAAKQ---MAMKAAAAGVGEQDIIVENK 58
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST--VQFIPYPIISHDL 157
+ +T NA F ++VT YHM R L +R+ V+ +
Sbjct: 59 SGSTYQNALYTKDIVLSRGFKSAIVVTSPYHMRRARLVFERVFRNTGVKLFYCAAKNSGF 118
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ ++ L E++K++ +
Sbjct: 119 NADGRCSSKADRQITLREWIKLVYYWFR 146
>gi|163783486|ref|ZP_02178477.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881250|gb|EDP74763.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
Length = 239
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 24/185 (12%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFIS 68
+ F P IVVL G R+ F LL + G+ + +S
Sbjct: 57 VLFYPLESPFKTPKRIRGDVIVVLGGGAYNSGYLKASSYKRLIAGF-LLHRRTGKPLILS 115
Query: 69 G-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G V +++++ + + E I ++ +T NA+ EK +
Sbjct: 116 GGAAIGVIPEAK---VMKELLLEFGVEEKDIYADLRSRDTYENAKYVRNICEKIGCRSIT 172
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPI-ISHDLEENSSIFKIKIL---RVLLIEYLKI 179
+VT +HM R + ++ VQ P + S+ K + + + EY+ +
Sbjct: 173 LVTSAFHMRRALMVFKKTGLEVQPYPTDLKFEGRYNLYSAFPKYSVFYDSSIAIREYVGL 232
Query: 180 LLLSI 184
L S+
Sbjct: 233 LFYSL 237
>gi|320161035|ref|YP_004174259.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
gi|319994888|dbj|BAJ63659.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
Length = 202
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 13/184 (7%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFI 67
+C+ F++G I + + P AIVVL+G R+E+A L++ + +
Sbjct: 21 LCITPFLLGSIGSLLVISTPLQP----ADAIVVLSGGRDLQRLEKAVNLMKEGQAGYLIL 76
Query: 68 SGVHHSV-----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+ + D L + R + + NTE A + + +
Sbjct: 77 TKTEDITESGRQTADYLASEAHQRGIPVPKIVITQKTSKNTEQEAIATLEILRERGWKTL 136
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIIS--HDLEENSSIFKIKILRVLLIEYLKIL 180
++VT YH R+ + + + Y + S D+ R + E L +L
Sbjct: 137 IVVTDPYHTLRSRIIFREVMRKDSIKVYTVPSKKPDVPSWLWYIDGNSRRAVWREILSLL 196
Query: 181 LLSI 184
+
Sbjct: 197 AYLL 200
>gi|269963292|ref|ZP_06177623.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
gi|269831931|gb|EEZ86059.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
Length = 207
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A L + + K+ +SG + ++ + +++ + + + I + A NT
Sbjct: 62 KMPTAVRLYKEKKVSKLLLSGGNLAIDQKPEFESMKEYALDNGVPDSDIILERHAKNTVE 121
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSS 162
NAQ +S ++ V I+T +H+ R + ++ Y + ++
Sbjct: 122 NAQYSSEIILESEIAKRSVAILTTAFHIKRAKYLFKNALPQYLELHSYFVNDRSTRRDNW 181
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ I RV+ E +K L +
Sbjct: 182 WLTESAISRVMHSHEVIKRLGVK 204
>gi|325681016|ref|ZP_08160548.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
gi|324107245|gb|EGC01529.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
Length = 193
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 14/168 (8%)
Query: 33 DHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVH-HSVSKDIL-----LQK 82
D + I+VL G R+ A L ++ + SG + + ++
Sbjct: 27 DGSAADLIMVL-GSRKACEYRVPEAVRLYKSGRAPMMLFSGGKVQKTALGEMAEWLSMET 85
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQR 140
I ++E I + ++NT N + + + +++VT YHM R L ++
Sbjct: 86 AAISLGVSERDILLEKCSMNTAENFSCSENLLREVLPDGGRIILVTTAYHMRRALLTAEK 145
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
I +FI P+ + + K R +L E+ K L I+ +
Sbjct: 146 ILPQYEFISCPVQKGSATKENWYKTDKGRRTVLDEWGK-LRYYIRAGI 192
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 81.4 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 11 CLIFFIMGFISFIRYVKQMHIP-----DHPSVSAIVVL-----TGEP------IRIERAF 54
+I I F F P H +VL T R++ A
Sbjct: 1 MMIIIICLFFLFASCYPYHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSRIQKQRMDHAI 60
Query: 55 ELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + +KI ISG V + + +++ I Q++ E I + A NT N + A+
Sbjct: 61 TLYQKGSIQKILISGAAVANCFIEAEVMKDYAIAQNVPEKDILLEKYAKNTYENLKYAAD 120
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
K++F +IVT +H+ R Q+ + F YP+ + + +++ L
Sbjct: 121 LCNKHHFSKTIIVTSGFHIRRAGFFAQKFLTDFTF--YPVSEKENQRYFITEYLRMWNTL 178
Query: 173 LIEY 176
E+
Sbjct: 179 YYEW 182
>gi|116329099|ref|YP_798819.1| hypothetical protein LBL_2520 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330291|ref|YP_800009.1| hypothetical protein LBJ_0560 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121843|gb|ABJ79886.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123980|gb|ABJ75251.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 273
Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 30/195 (15%)
Query: 25 YVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFIS 68
Y + + P I+VL G R+ L + KI S
Sbjct: 68 YYPPLPLEQVPRADVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKKAPKILFS 127
Query: 69 GV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + +V + + + + + + + K+ NT N A +K+ + V+
Sbjct: 128 GGSGNLLYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTVENKNFAVELLKKHGWSSVI 187
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPII----SHDLEENSSIFKIKILR---VLLIEY 176
+VT +HM R+ Q + IP+P L ++ L + + E+
Sbjct: 188 LVTSSFHMKRSVEIFQE--KGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTISIKEW 245
Query: 177 LKILLLSIQLSLSTQ 191
+ IL+ I+ ++S Q
Sbjct: 246 IGILVHKIRTTISIQ 260
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P+ I+VL G R+ A L + ++G I +SG
Sbjct: 12 PPKHLPNADVIIVLGGGATGDTPDVTGTGTLCSIPANRLLTAVRL-QKKLGIPIIVSGGQ 70
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
S + + ++I ++E I + ++LNT NA+ ++ + + L+VT
Sbjct: 71 IYEDSGREADIARRILKELGVSEDMILLENRSLNTTQNAEYSTNILKSRKYKQPLLVTSA 130
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ V IPYP
Sbjct: 131 FHMERAVVNFNKL--GVDVIPYP 151
>gi|304309671|ref|YP_003809269.1| hypothetical protein HDN1F_00190 [gamma proteobacterium HdN1]
gi|301795404|emb|CBL43602.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 256
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 28/171 (16%)
Query: 5 WYGLFVCL-----IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------- 46
+ GL V + + + + S + + P IVVL G
Sbjct: 41 FLGLVVLVFASMPLVAVGLWKSLEGRYPILVPSEQPKADVIVVLGGGIALPEPPQVVPDL 100
Query: 47 ---PIRIERAFELLENQIGEKIFISG--VHHS---VSKDILLQKIPIRQDLAECCIDIGY 98
R+ A EL + +SG V S+ +K+ R + I +
Sbjct: 101 NDAADRVWYAAELYHAGKAPWVVVSGGQVFPRSGLESEAEYHRKLLERMGVPAEAILVES 160
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ +T GNA +A + F L+VT HMPR L + V +P
Sbjct: 161 ASRDTAGNAMLTAALMRERKFQKALLVTSAAHMPRAVLLFEHA--GVDVVP 209
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 21 SFIRYVKQMHI-PDHPSVSAIVVLTGEP------------------IRIERAFELLENQI 61
F+ +++ + P+HP I++L G R+ A L
Sbjct: 66 LFMGSLERTYPVPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRL-HRLY 124
Query: 62 GEKIFISG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G I +SG V ++ + +++ I + E I ++L T NA+ ++ +
Sbjct: 125 GLPILLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTRQNARYSAEILHREG 184
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
F H ++VT +H+PR L +++ ++ PYP
Sbjct: 185 FTHPILVTSAFHLPRAVLNFEKL--GIEVTPYP 215
>gi|37523632|ref|NP_927009.1| hypothetical protein gll4063 [Gloeobacter violaceus PCC 7421]
gi|35214637|dbj|BAC92004.1| gll4063 [Gloeobacter violaceus PCC 7421]
Length = 260
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 37/216 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------E 46
W G F S ++ + ++PS AIVVL G
Sbjct: 46 VLWLGSFSAPAVADALLWSLESQYPEVPVENNPSAQAIVVLGGALHLPNARHRTYELAES 105
Query: 47 PIRIERAFELLENQIGEKIFISGVHH-----------SVSKDILLQKIPIRQDLAECCID 95
R+ A L + + +SG + + +++ + I
Sbjct: 106 SDRVLHAARLFKAGKAPVVLMSGGNPPFHTRPDQPPEATQMAAFARELGVPAGA----IL 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
++ NT NA ++ + +L+VT HMPR+ +R V + S
Sbjct: 162 TEERSWNTFQNAAFSAEVLKARRMTRILLVTSASHMPRSVAIFERAGFAVIAASTDVRSG 221
Query: 156 ---DLEENSSIFKIKILR---VLLIEYLKILLLSIQ 185
D + + L + L E++ +L+ ++
Sbjct: 222 TDLDDWLLAWLPSAAALESSTLALKEWVGLLVYRLR 257
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 48/205 (23%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIF 66
+ + P AIVVL G RI +L +
Sbjct: 35 SLETQNLPPTPIPQTRAIVVLGGGIKPALPPRPWVEVGEAGDRILYGSQLYRQGKAPWLI 94
Query: 67 ISG--VH-------HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+SG V S + Q + + I +LNT NA + N
Sbjct: 95 LSGGRVEWKGGGPPESADMAEIAQAMGVPTSA----ILQDPTSLNTYQNAVNVRKILKDN 150
Query: 118 NF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL 172
N +L+VT HMPR+ L QR ++ IP P I D+E + S F+ +L +L
Sbjct: 151 NILGPILLVTSALHMPRSLLIFQR--QGIETIPAPTDFSITQQDMEASQSSFQAVLLNLL 208
Query: 173 ------------LIEYLKILLLSIQ 185
L EY+ + + ++
Sbjct: 209 PDAYNLQQSTKALKEYIGLAVYRLR 233
>gi|296133679|ref|YP_003640926.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296032257|gb|ADG83025.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 202
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 15/196 (7%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRI 50
R LF + + + + AIVVL+G R
Sbjct: 6 RNLVITLFTGFLILLYTPLIQYAASPLIVKDPLQKADAIVVLSGGWKAKGVLGTSTLERY 65
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNAQ 108
+ +L + + I SG + + + + +T N
Sbjct: 66 QYGIKLFQKKFAPVIIFSGGNLLGRPAEADAMADMALSAGFPYEAVISENASASTYENVL 125
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
+ ++ +++VT YH R + + V+ P+ + + E+ + + ++K+
Sbjct: 126 FTTKILQEKRLKSIILVTSPYHTYRAKKMFE--DKQVKVTAAPVPNGEFEKANGLERLKL 183
Query: 169 LRVLLIEYLKILLLSI 184
+ +++EY K+L+ +
Sbjct: 184 AKNIVLEYGKLLVYEV 199
>gi|320161712|ref|YP_004174937.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
gi|319995566|dbj|BAJ64337.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
Length = 264
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 54/235 (22%)
Query: 2 RYFWYGLFVCLIF-----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------- 46
R + GL + ++ ++ ++ + + S A+VVL G
Sbjct: 36 RNLFTGLALFILLVSSNRWVATTLARSLEWQYLPNEPISSAPAMVVLGGGTEPAFPPRSQ 95
Query: 47 ------PIRIERAFELLENQIGEKIFISGVH----------HSVSKDILLQKIPIRQDLA 90
R+ A L + + +SG + + LL+ + + +
Sbjct: 96 PEVNSAGDRVLYAAALYQQGKAPLVIVSGGNVAFRGEQSSTPASDMRHLLKMLGVPPEA- 154
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP- 149
I ++ NT NA + ++ + V++VT HMPR+ ++ ++ IP
Sbjct: 155 ---ILEEDQSQNTYENALYCAKLLKERHIQRVILVTSALHMPRSVKLFEK--QGIEVIPA 209
Query: 150 ---YPIISHDLEENSSIFKIKILRVL-------------LIEYLKILLLSIQLSL 188
+ + + E+ L L L EY+ IL+ ++ L
Sbjct: 210 PADFAVPFQEWEDLLHAPIPAQLVALLPSSSNLQLTTNVLHEYIGILVYWMRGWL 264
>gi|288574503|ref|ZP_06392860.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570244|gb|EFC91801.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 270
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEG 105
R+ L + G I +SG + + + + IR+ + I + + T
Sbjct: 108 QRLIEGASL-ARRKGYPILLSGGLSYDKSESIARSMERSIRKWGYKGEIMLEENSRTTWE 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS--HDLEENS-- 161
N +++ + +++VT+ +HM R+ ++ ++ PY I S D++ +
Sbjct: 167 NMTYSASILRRKGIDRIILVTNSFHMKRSLWMAKKAMPDIEVYPYAIGSLADDMDSDPLK 226
Query: 162 SIFKIKILR---VLLIEYLKILLLSI 184
I LR + E + + + I
Sbjct: 227 WIPTAGALRDSSLAWKEIVGLTVYRI 252
>gi|218288615|ref|ZP_03492892.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218241272|gb|EED08447.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 199
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 17/163 (10%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISFIRYVKQM-HIPDHPSVSAIVVL---TGEPI----- 48
M + W L C + + + F +K VVL T
Sbjct: 1 MAWLWMCLLACGVAALGSLAFLLRFAERLKHEGRSHRPQKSDVGVVLGAYTDGYEPSHPL 60
Query: 49 --RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A L I +SG + +VS+ +++ + + + + NT
Sbjct: 61 VARLRAAIALYRQGYIRAIIVSGGQGENETVSEARSMKRFLVMNGIPADAVHEERMSTNT 120
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N +SA + +I+T DYH+PR + +
Sbjct: 121 WENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMLGMDAT 163
>gi|153004625|ref|YP_001378950.1| hypothetical protein Anae109_1763 [Anaeromyxobacter sp. Fw109-5]
gi|152028198|gb|ABS25966.1| protein of unknown function DUF218 [Anaeromyxobacter sp. Fw109-5]
Length = 252
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------------PI 48
+ L G F+ + A +VL+G+
Sbjct: 46 VLVVFSLAPVANGLQRFVERGAERTFRPGAVYDAAIVLSGQVDEAASRASGELELDAAAD 105
Query: 49 RIERAFELLENQIGEKIFISGVHHSV-----SKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ R EL ++ +SG + S+ L+ +R + I + ++ NT
Sbjct: 106 RVVRGLELWRAGRVRRLLLSGGPPAAVPGEPSEAERLRDALVRWGVPAAAILVDPQSRNT 165
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
NA ++ A ++ +L+VT H PR + + + V P+ S
Sbjct: 166 RENAIASAHLAAEHGLRSLLLVTSAAHAPRALGCFRAVGLSPDVL----PVDRRTGPSGS 221
Query: 162 SIFKIKIL 169
+ + L
Sbjct: 222 WLPRAGAL 229
>gi|22299705|ref|NP_682952.1| hypothetical protein tlr2162 [Thermosynechococcus elongatus BP-1]
gi|22295889|dbj|BAC09714.1| tlr2162 [Thermosynechococcus elongatus BP-1]
Length = 263
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 68/213 (31%), Gaps = 43/213 (20%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLE 58
++ + + + P +AIVVL G RI L
Sbjct: 55 YVAATLIASLERQYLPPHPMPKAAAIVVLGGAVVPQTAPRPWVEVTEGGDRILYGAHLFR 114
Query: 59 NQIGEKIFISGV-----------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ +SG +V + + +D I + +LNT NA
Sbjct: 115 QGSDPYLILSGGRINWLGETFQQAEAVDMAEIATTCGVPRDK----ILLETSSLNTYQNA 170
Query: 108 QEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A EK+ +L+VT YHMPR +R+ V P + + + +
Sbjct: 171 VNVKALLEKHQMQGKLLLVTSAYHMPRAVAIFRRLGMDVIPAPTDYRYPTIARSPTWQNL 230
Query: 167 -----------KILRVLLIEYLKILLLSIQLSL 188
I + L EY +L+ ++ L
Sbjct: 231 LLSLIPNPYNVDITTIALREYQGLLIYRLRGWL 263
>gi|317055190|ref|YP_004103657.1| hypothetical protein Rumal_0470 [Ruminococcus albus 7]
gi|315447459|gb|ADU21023.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 198
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 59/174 (33%), Gaps = 18/174 (10%)
Query: 33 DHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVH-HSVSKDIL-----LQK 82
D S I+VL G R+ A L I +SG S + ++K
Sbjct: 27 DGSSADLIMVL-GSRKACDYRVPEAVRLYNEGKAPLILLSGGQVQDTSLGNMAEWESMKK 85
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLEL 138
+ ++E I + NT N + + +++VT YHM R
Sbjct: 86 AALALGISESDILAEKLSKNTAENFMYSDELLI--GYLPLGSKIILVTTAYHMRRALCMA 143
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
+ FIP P+ + + K + L E+ K L I+ + T
Sbjct: 144 HKFMPGYDFIPCPVQKGSATKENWYKTDKGRQTALDEWRK-LSYYIKDGIFEDT 196
>gi|311032605|ref|ZP_07710695.1| hypothetical protein Bm3-1_19074 [Bacillus sp. m3-13]
Length = 207
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 16/164 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISG--VHHSVSKDI--LLQKI 83
D+ + I V R+ A +L + KI SG V LL +
Sbjct: 29 DNRNGDCIFVP--GSSKAVQYRLPPAIQLYQEGRAGKILFSGGVVWDGNQLSEAQLLAEK 86
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEAS----AWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + I I ++L+T+ N + + +++VT YHM R L+L+
Sbjct: 87 AMELGVPSEDILIENQSLHTKENVLASLLVLDRALHLHKISRLIVVTSHYHMRRMNLKLR 146
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ + P+ E++ + + E K++
Sbjct: 147 TYMPDWIDYSLCPVNDRTTREDNWFLNPYGRQRVEAESAKLISY 190
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 91 ECCIDIGY---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
E +DI + ++ NT NA +K + HHV +VTH YHMPR+ Q+ TV
Sbjct: 41 ELNVDIAWPEGESRNTWENAHFTKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSP 100
Query: 148 IPYPIISHDLEENSSIFKIKIL------RVLLIEYLKILLLSIQ 185
+P +S + + + R+ L EYL +L S++
Sbjct: 101 MPTGQLSQQSSTSYWLNWLPSAGALHISRLALHEYLGLLFYSLK 144
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVLLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E + + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGIPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA E+ + H V+IV+ HM R
Sbjct: 130 LVEAKRLMEQRDLHRVIIVSDPLHMARAL 158
>gi|190576261|ref|YP_001974106.1| hypothetical protein Smlt4469 [Stenotrophomonas maltophilia K279a]
gi|190014183|emb|CAQ47827.1| conserved hypothetical exported protein [Stenotrophomonas
maltophilia K279a]
Length = 210
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVLLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E + + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGVPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA ++ H V++V+ HM R
Sbjct: 130 LVEAKRLMDQRGLHRVIVVSDPLHMARAL 158
>gi|37520492|ref|NP_923869.1| hypothetical protein glr0923 [Gloeobacter violaceus PCC 7421]
gi|35211486|dbj|BAC88864.1| glr0923 [Gloeobacter violaceus PCC 7421]
Length = 239
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 21/162 (12%)
Query: 29 MHIPDHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVHH-SVSKDILLQKI 83
P + AIVVL R+E A L +IFISG + L +
Sbjct: 85 PEAPSNLKADAIVVLGRGERLRHTRVELAARLWRAGRAPRIFISGRNDADTMVADLRRM- 143
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
L + + T+ NA+ + +L+VT HM R+ +
Sbjct: 144 ----GLPAKAVAGEECSRTTQENAEFTARILRPAGVRTLLLVTDAPHMLRSLRTFKEAGF 199
Query: 144 TVQFI--PYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ P+P +L E +++ EYL +L
Sbjct: 200 NSAAVTSPFPEKLSELRERL---------IVVREYLGLLTYR 232
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 71/197 (36%), Gaps = 28/197 (14%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------------IRIERAFELL 57
+ G + KQ P + IVVL G R+ A L
Sbjct: 54 LAGDVLIRSLEKQYPQPLTVQGNVIVVLGGGATEGTPDINGQGNLLGSAANRLLTAARL- 112
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
G I SG S ++ + Q+ + + I I ++LNT+ NA S
Sbjct: 113 HEATGLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNAVYTSKIL 172
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH------DLEENSSIFKIKI 168
+++ ++VT +HMPR LE QR P ++ + + S I
Sbjct: 173 KQHQLTKPILVTSAFHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSPSAGAIST 232
Query: 169 LRVLLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 233 TGTALKEYLGILALKLK 249
>gi|258511943|ref|YP_003185377.1| hypothetical protein Aaci_1976 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478669|gb|ACV58988.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 199
Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 17/153 (11%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISFIRYVKQM-HIPDHPSVSAIVVL---TGEPI----- 48
M + W L C + + + F +K VVL T
Sbjct: 1 MAWLWMCLLACGVAALGSLAFLLRFAVRLKHEGRSHRPQKSDVGVVLGAYTDGYEPSHPL 60
Query: 49 --RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A L I +SG + +VS+ +++ + + + + NT
Sbjct: 61 VARLRAAIALYRQGYIRAIIVSGGQGENETVSEARSMKRFLVMNGIPSDAVHEERMSTNT 120
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N +SA + +I+T DYH+PR
Sbjct: 121 WENLYHSSAIMRDRGYRTAVIITSDYHLPRALA 153
>gi|304404431|ref|ZP_07386092.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
gi|304346238|gb|EFM12071.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
Length = 230
Score = 78.0 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----------TGEPIRIERAFEL 56
+ V + + + I VK+ P I+VL G R++ AF L
Sbjct: 28 WMIVLGVLWCGYLLWLINDVKRPLPRSLPKADVIIVLGAALWSDKPSPGLKERLDYAFGL 87
Query: 57 LENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ +K+ ++G ++++ +++ + + + I KA +T N +
Sbjct: 88 YKLGKADKLILTGGLDGNGSTITEAEGMRRYLTARGIPNDKLLIENKATSTYENLLFSKQ 147
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ VLIVTHDYH R E+ R
Sbjct: 148 ITDRGGMKQVLIVTHDYHSSRA-AEIAR 174
>gi|254228155|ref|ZP_04921584.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393954|ref|YP_003285808.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
gi|151939228|gb|EDN58057.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337548|gb|ACY51343.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
Length = 205
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A +L + + K+ +SG + ++ + +++ + ++E I + A NT
Sbjct: 60 KMPTAVQLYKEKKVSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 119
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
NAQ ++ ++ V I+T +H+ R + + ++ Y + ++
Sbjct: 120 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDNW 179
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ + RV+ E +K L +
Sbjct: 180 WLTESAVSRVMHSHEVIKSLGVK 202
>gi|254228166|ref|ZP_04921595.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393992|ref|YP_003285846.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
gi|151939239|gb|EDN58068.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337586|gb|ACY51381.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
Length = 209
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A +L + + K+ +SG + ++ + +++ + ++E I + A NT
Sbjct: 64 KMPTAVQLYKEKKVSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 123
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
NAQ ++ ++ V I+T +H+ R + + ++ Y + ++
Sbjct: 124 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDNW 183
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ + RV+ E +K L +
Sbjct: 184 WLTESAVSRVMHSHEVIKSLGVK 206
>gi|332968539|gb|EGK07600.1| protein of hypothetical function DUF218 [Kingella kingae ATCC
23330]
Length = 207
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAF 54
GL + LI + + + Y P A VVL G RI A
Sbjct: 15 LGLSIALISSLQLWCVWQVYAYSRPQPLPDEADAAVVL-GAAAWGNKPSPVFRERINHAL 73
Query: 55 ELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L + +KI +G ++ + ++ I+Q +A+ I ++ +T N
Sbjct: 74 TLYQTGRVKKIIFTGGTPKAGFATEAEVARQYAIKQGIADQDIVFETRSKDTFQNLANTR 133
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
+K++ + V+IV+ YHM R
Sbjct: 134 FLMKKHHLNSVIIVSDPYHMARAMN 158
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 77.6 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVVLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E Q + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEAQYAPLLIFTGGYGGSGARFSESQVARRYALKHGVPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA ++ N H V+IV+ HM R
Sbjct: 130 LIEAKRLMDQRNLHRVIIVSDPLHMARAL 158
>gi|110597117|ref|ZP_01385406.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110341308|gb|EAT59773.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 599
Score = 77.6 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 15/198 (7%)
Query: 4 FWYGLFVCLIFFIMGFISFI-RYVKQMHIPDHPSVSAIVVLTGEPI----------RIER 52
L + L+ F FI + H P AIVV +G R
Sbjct: 401 LTVLLMLYLVIFHSPLFWFIGDQLVVRHAPL--KTDAIVVFSGNGESAYRNDSYQRRALD 458
Query: 53 AFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI-DIGYKALNTEGNAQEA 110
A IF+S G +S+ +++ + +A I + +T N +
Sbjct: 459 AVRFYRQGYAPHIFLSSGKEQDLSEVDVIKLYLEDKGVAASAIHILDKYPKSTSENVEMV 518
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR 170
+ H +L +T YH R ++ + + ++ + + +
Sbjct: 519 MQQLRRQGVHSILFLTSPYHGRRALWTWRKQAPDITVLTPAVVDTPPADPQWGATVDQIS 578
Query: 171 VLLIEYLKILLLSIQLSL 188
V++ EY+ I+ Q L
Sbjct: 579 VIVYEYVAIVYNWFQGRL 596
>gi|309775431|ref|ZP_07670434.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916820|gb|EFP62557.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 193
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPI------------RIERAFE 55
+ ++F I + Y + P V A +VL G P R++ A
Sbjct: 6 AILIVFLIAANLILYHYFPKPKKPKAGRVYDAAIVL-GSPAKEDGSLSRLQKTRMDAAIR 64
Query: 56 LLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L ++I ISG V + ++ ++ I +A+ + + KA NT N + A
Sbjct: 65 LYRQHTVQRIIISGGSVRNDYAEAEIMAAYAITCGIAKEVLLLERKARNTYENLKYAKEI 124
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
+ +H V++VT +H+ R
Sbjct: 125 CIAHEWHSVVVVTSSFHVRRA 145
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 21 SFIRYVKQMHI-PDHPSVSAIVVLTGEP------------------IRIERAFELLENQI 61
F+ +++ + P+HP I++L G R+ A L
Sbjct: 66 LFMGSLERTYPVPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRL-HRLY 124
Query: 62 GEKIFISG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G I +SG V ++ + +++ I + E I ++L T NA+ ++ +
Sbjct: 125 GLPILLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTGQNARYSAEILHREG 184
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
F H ++VT +H+PR L +++ ++ PYP
Sbjct: 185 FMHPILVTSAFHLPRAVLNFEKL--GIEVTPYP 215
>gi|332715738|ref|YP_004443204.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
gi|325062423|gb|ADY66113.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
Length = 232
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 9/185 (4%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEK 64
GL + + G + IVVL G P R +A +L
Sbjct: 42 LGLMMLTAIGLYGLALVSAGSLLVVEDPPAQADVIVVLGGDGPPRAAQAAKLWHEGRAPL 101
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++G ++ + +R + + +L+T NA A ++
Sbjct: 102 VLVTGYGDC----DFIRDMLVRLGVDSAVVSTECLSLSTWENATFAQPILTGMGAKSAIL 157
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP-IISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT +H R + + +++I P + L + + EY K LL
Sbjct: 158 VTSWFHSRRAVKRFRFVMPQIEWISLPAQRTVSLWRLAIDGDGVQV---FKEYAKALLYD 214
Query: 184 IQLSL 188
I+ S
Sbjct: 215 IRSSF 219
>gi|297567344|ref|YP_003686316.1| hypothetical protein Mesil_2970 [Meiothermus silvanus DSM 9946]
gi|296851793|gb|ADH64808.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 211
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 21/200 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF---------IRYVKQMHIPDHPSVSAIVVLTGEPIRIE 51
+R GL + + + + + + +AIV L G R+
Sbjct: 8 LRIPLVGLALVAVLGLAHGLWLPGIAAWLVVTEPLTSLEGLRSDPQAAIVPLAGGRERVL 67
Query: 52 RAFELLENQIGEKIFIS-------GVHHSVSKDILLQKIPIRQDLAECCIDI-GYKALNT 103
A L G + G+ L+ + + Q + + + T
Sbjct: 68 YAAALFRQGYGRWFLATDMPLDAPGI--RERYAELVAREAVWQGVPRSAVVLSDLTVRTT 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
A+E A + +L+VT YH R L + S + +
Sbjct: 126 YEEAREILKVAHFRGWRSLLVVTSPYHTRRARWVLSEVFGTSGIAVHVVAAPEEGYTPQN 185
Query: 162 SIFKIKILRVLLIEYLKILL 181
+ LR EYLK++L
Sbjct: 186 WWQSVDGLRNTWTEYLKLVL 205
>gi|145219718|ref|YP_001130427.1| hypothetical protein Cvib_0911 [Prosthecochloris vibrioformis DSM
265]
gi|145205882|gb|ABP36925.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 196
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 7/185 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L V +GF+ + Y+ H I+VL G+ R++ L + G +
Sbjct: 10 RFLLVLSAIGALGFLG-LGYIVSFHAAPPVQSDVIIVLGGDSGRRVKHGAALYKEGYGAR 68
Query: 65 IFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ ++G+ + ++ + + + ++ T A +SA ++ +
Sbjct: 69 VVLTGIDRRFYRKGHLNWRERRMKALGVPLNAVLVDTRSETTWDEAVNSSALMKQRGWRT 128
Query: 122 VLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
L+V+ HM R E + F+ + R ++ E K
Sbjct: 129 ALVVSDPPHMLRLKKTWEAAFEGTDQTFVLTATKPGWWDPLLWWRNPISYRFVISEVKKN 188
Query: 180 LLLSI 184
L ++
Sbjct: 189 LFYAV 193
>gi|311747747|ref|ZP_07721532.1| membrane protein [Algoriphagus sp. PR1]
gi|126575735|gb|EAZ80045.1| membrane protein [Algoriphagus sp. PR1]
Length = 256
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 32/175 (18%)
Query: 41 VVLTG----------------EPIRIERAFELLENQIGEKIFISG------VHHSVSKDI 78
+VLTG RI A +L +KI I+G V+ S+
Sbjct: 79 IVLTGVTNLSKTAYDRTFFNKGADRITHALQLYRMGKIKKILITGGQGLNPVNPQ-SEAE 137
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPRTF 135
LLQ+ I + + I KA NT NAQ + E+ L++T +HM R+
Sbjct: 138 LLQRFLIMTGVPPEDVMIEDKAKNTAQNAQFTKTFLEEKGINIDQEFLLITSAFHMYRSK 197
Query: 136 LELQRINSTVQFIPYPIISHDLEEN------SSIFKIKILRVLLIEYLKILLLSI 184
++ + P S+D + + S I+ L+ E++ I + +
Sbjct: 198 GCFDKVGLKTETFPTDYYSYDTKYDFPTFMYPSPSSIENWHKLVKEWIGITVYKL 252
>gi|332969923|gb|EGK08925.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 189
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+++A +L + + + +SG + + ++++ + + + + + + ++ NT
Sbjct: 59 QERMDQALKLYQRGLAPILILSGGSPRGTTPEARVMKEYLVERGVRKRDLILEDRSTNTA 118
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
N + + V +VTHD+HM R +R + P P+ + L
Sbjct: 119 ENLVRSGELLLSHGIRDVYLVTHDFHMYRALRCARRA--QLSVTPAPVATRSLW 170
>gi|148558293|ref|YP_001257412.1| Bme2 protein [Brucella ovis ATCC 25840]
gi|148369578|gb|ABQ62450.1| Bme2 protein [Brucella ovis ATCC 25840]
Length = 205
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ +++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGIPPVIKHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 68/185 (36%), Gaps = 10/185 (5%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQI--GEKIFI 67
+G +++ Q P I+V G R E+A +LL+ EK +
Sbjct: 11 AFAALAIGLRYIYKHLDQGQAPQVS--DLIIVAEGPAVERAEKAVQLLKAAYSRAEKNIV 68
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + V + L E I+ +A +T NA + + +H ++VT
Sbjct: 69 SPRYTDVG-EDLFAGYQQLGAERENLIE-ENQATSTWTNATTSLDLMDDLGYHSAIVVTS 126
Query: 128 DYHMPRTFLELQRINSTVQF-IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
DYHM RT L QR N F + Y +S + ++ L E K + + L
Sbjct: 127 DYHMRRTRLAFQRANRDYGFQLTY--VSAYYQGQPYPKHPYTQKMALQELYKYIGYCLHL 184
Query: 187 SLSTQ 191
Sbjct: 185 YHWID 189
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 45/206 (21%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIF 66
+ + + P +AIVVL G RI L + +
Sbjct: 63 SLEWQNIPNGELPKATAIVVLGGGTKAPTPPRPWVDVGEAGDRILYGALLYKQDKAPWLI 122
Query: 67 ISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+SG S D +++I + + E I +LNT NA +NN
Sbjct: 123 LSGGRIQWDGKEPPESAD--MKEIAVEMGVRESAILQDPDSLNTYQNAVNVRQILAENNL 180
Query: 120 H-HVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL-- 172
VL+VT HMPR+ L QR ++ IP P + DL+ +++I + +IL ++
Sbjct: 181 TGKVLLVTSALHMPRSLLVFQR--QGIEVIPAPTDFLVSQQDLQPSTTI-QGRILNLIPD 237
Query: 173 ----------LIEYLKILLLSIQLSL 188
L EY+ +++ ++ L
Sbjct: 238 TQSLQQFTQALKEYIGMIVYRLRGWL 263
>gi|94266695|ref|ZP_01290369.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
gi|93452658|gb|EAT03218.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
Length = 254
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 31/211 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-------------- 46
+ + W+ + + +S + P+ IV+L G
Sbjct: 46 VAWLWFWSLPVVADALR--LSLEGRFAPQRAEELPAADFIVLLGGGVRGVPADWPYPDLN 103
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHS-----VSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L I +SG S+ ++++ + + + I + +
Sbjct: 104 AAADRVWHAPRLYHADKAPLIIVSGGGKEWHGERGSEAEAMRELLLAFGVPDGAIRLEDR 163
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY-----PIIS 154
+ +T NA + + VL+VT HMPR+ + + P P
Sbjct: 164 SRSTRENALYTAPLVGE---RPVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPL 220
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
H L + L EYL +L+ ++
Sbjct: 221 HSLRLLPDAHSLHQSTSALKEYLGLLVYRLR 251
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 26/182 (14%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELL 57
MG + + A++VL G R+ R FELL
Sbjct: 56 VAMGLMRAAEAGAVRSFQPGATYDAVIVLGGALDPAATERTGVPEYNAAAERVLRGFELL 115
Query: 58 ENQIGEKIFISGV--HHS----VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
++ +SG V D+LL+++ E + G + NT NA E++
Sbjct: 116 HEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGR-SRNTRENAVESA 174
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD--LEENSSIFKIKIL 169
++ + +L+VT HMPR + +P + + L S + + L
Sbjct: 175 RIIQERGWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGAL 234
Query: 170 RV 171
+
Sbjct: 235 NL 236
>gi|254282506|ref|ZP_04957474.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678709|gb|EED35058.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 253
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 30/213 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-------IRYVKQMHIPDHPSVSAIVVLTGE-------- 46
+ W L L++F + P IVVL G
Sbjct: 37 AFLWSFLAFALVYFCSTEFGANTLMEPLEARYPAFAPEELPKAEVIVVLGGAIDGESRFG 96
Query: 47 --------PIRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDI 96
R+ A EL ++ + +SG S + L+ + + + +
Sbjct: 97 RGGDATHAADRLLTAAELYARKMAPYMLLSGGAPSGQRPEADLMAEKLEFMGVPRSAMLL 156
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIIS 154
+ T NA ++ N+ H+L+VT HM R + V + + I
Sbjct: 157 EPASRTTFDNAVNSADMLNARNYRHILLVTSGAHMRRAVALFEAFGLQVTAVATDHQIPR 216
Query: 155 HDLEENSSIFKIKILR---VLLIEYLKILLLSI 184
+ + L + E++ + +
Sbjct: 217 YAPTVPGWLPTADRLARSTRAVHEWVGYWVYDL 249
>gi|161620495|ref|YP_001594381.1| hypothetical protein BCAN_B0429 [Brucella canis ATCC 23365]
gi|163844593|ref|YP_001622248.1| hypothetical protein BSUIS_B0427 [Brucella suis ATCC 23445]
gi|225686235|ref|YP_002734207.1| hypothetical protein BMEA_B0404 [Brucella melitensis ATCC 23457]
gi|254699682|ref|ZP_05161510.1| hypothetical protein Bsuib55_02296 [Brucella suis bv. 5 str. 513]
gi|254702819|ref|ZP_05164647.1| hypothetical protein Bsuib36_02539 [Brucella suis bv. 3 str. 686]
gi|256015209|ref|YP_003105218.1| Bme2 protein [Brucella microti CCM 4915]
gi|256043322|ref|ZP_05446257.1| hypothetical protein Bmelb1R_02479 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111677|ref|ZP_05452661.1| hypothetical protein Bmelb3E_03418 [Brucella melitensis bv. 3 str.
Ether]
gi|256262633|ref|ZP_05465165.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|260564530|ref|ZP_05835015.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260568269|ref|ZP_05838738.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261750147|ref|ZP_05993856.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753420|ref|ZP_05997129.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265989745|ref|ZP_06102302.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993148|ref|ZP_06105705.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|294853761|ref|ZP_06794433.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297250207|ref|ZP_06933894.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|5478233|gb|AAD43833.1|AF076290_2 Bme2 [Brucella melitensis]
gi|161337306|gb|ABX63610.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|163675316|gb|ABY39426.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642340|gb|ACO02253.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|255997869|gb|ACU49556.1| Bme2 protein [Brucella microti CCM 4915]
gi|260152173|gb|EEW87266.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260154934|gb|EEW90015.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261739900|gb|EEY27826.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743173|gb|EEY31099.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764018|gb|EEZ10050.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|263000414|gb|EEZ13104.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092418|gb|EEZ16671.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|294819416|gb|EFG36416.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297172960|gb|EFH32338.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|326410585|gb|ADZ67649.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326553876|gb|ADZ88515.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 205
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|291614927|ref|YP_003525084.1| hypothetical protein Slit_2472 [Sideroxydans lithotrophicus ES-1]
gi|291585039|gb|ADE12697.1| protein of unknown function DUF218 [Sideroxydans lithotrophicus
ES-1]
Length = 251
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 31/207 (14%)
Query: 9 FVCLIFFIMGFISFIRYVKQ-------MHIPDHPSVSAIVVLTGEPI------------- 48
+ +++ F + Q ++ P AIVVL G
Sbjct: 45 VSVALLWLLSTPFFAEAMLQGLEGQPFVNDTSKPQADAIVVLGGGTNFRAPEYGGDTVSK 104
Query: 49 ----RIERAFELLENQIGEKIFISGVHH-SVSKDILLQKIPIRQDLAECCID-IGYKALN 102
R+ A L G+ I ++G Q + + + N
Sbjct: 105 ETLERLRYAARLYRQ-TGKPILVTGGTPLGNDLSEAAQMKKTLEQEFNVPVRWAEGASNN 163
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS----HDLE 158
T NA+ + +K + +VTH +HMPR Q V P + L
Sbjct: 164 TLENARLSREVLKKEGISRIYLVTHAWHMPRAVQVFQAAGFQVYPAPTAYTTRYQLDLLV 223
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQ 185
S ++ R+ + E + +L ++
Sbjct: 224 FIPSASALRDSRIFMHEMIGLLWYRLK 250
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 35/219 (15%)
Query: 3 YFWYGLFVCLIF----FIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG------------ 45
WY V F G + F+ + + +P AIVVL G
Sbjct: 33 LLWYAALVLWAFSIPTVADGLMHFVEGNRTVALPQTLHQADAIVVLGGMIRRVEGAAEGE 92
Query: 46 ---EPIRIERAFELLENQIGEKIFIS-GVHH----SVSKDILLQKIPIRQDLAECCIDIG 97
R E L + + G +V + LL + +++ + E + +
Sbjct: 93 WNDAADRFEAGVTLYRAGKAPLLLFTRGRMPWSPDAVPEGELLVERALQRGVPEAALGLT 152
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII---- 153
NTE A + + + +++VT YHM R+ L + +V+ PYP+
Sbjct: 153 APVANTEDEAADVARLLRERGAERIILVTSAYHMRRSQLLFEHTGLSVE--PYPVDFRVD 210
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
L S + L E + L ++L
Sbjct: 211 SYPEPAVLRFAPSAEALYRSETALRELIGWLYYRVKLFF 249
>gi|306845690|ref|ZP_07478259.1| Bme2 protein [Brucella sp. BO1]
gi|306274011|gb|EFM55838.1| Bme2 protein [Brucella sp. BO1]
Length = 205
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILLGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G ++ + +P L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMIAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ S ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFASSPVADADMPGGLS-GTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|23500175|ref|NP_699615.1| Bme2 protein [Brucella suis 1330]
gi|23463775|gb|AAN33620.1| Bme2 protein [Brucella suis 1330]
Length = 205
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 35/195 (17%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFI 67
RY I D+P V AIVV+ G R+ A L I +
Sbjct: 6 RYHPSQDITDYPMVQAIVVIGGCLESAKPPRRTFNVGDAGDRVIHAARLYHAGKAPLILV 65
Query: 68 SG-------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG V ++ + + ++ T NA + + H
Sbjct: 66 SGGTLPWRKVPPE---ADAMRAFLEELGVPTKAVMSEPDSITTYENALFSKKLLDNKGIH 122
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-------IKILRVLL 173
+L+VT +HM R+ +++ + IP P ++ S+F + + +
Sbjct: 123 KILLVTSAFHMRRSAAVFRKV--GFEVIPAPTDFRVVKNPPSLFDYLPDVRYLHQTTIAI 180
Query: 174 IEYLKILLLSIQLSL 188
EY+ + +++ L
Sbjct: 181 KEYIGLEYYALKQRL 195
>gi|83814701|ref|YP_445779.1| hypothetical protein SRU_1660 [Salinibacter ruber DSM 13855]
gi|83756095|gb|ABC44208.1| Uncharacterized ACR, COG1434 family [Salinibacter ruber DSM 13855]
Length = 281
Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 68/230 (29%), Gaps = 38/230 (16%)
Query: 2 RYFWYGLFV--CLIFFIMGFI----SFIRYVKQMHIPDH----PSVSAIVVLTGE----- 46
R L V L+ ++ ++ H P PS A VVL G
Sbjct: 34 RRSGMALLVGGVLVLWVASAPLVSDWLRGRLEGQHPPTRVDSLPSAEAAVVLGGGVSPPR 93
Query: 47 -----------PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--- 92
R+ A L + SG + ++ P L +
Sbjct: 94 PPRIHPDLNDAADRVWHAARLYHAGKVPLVIASGGTQPWKRPD-AREAPATNVLLQDWGV 152
Query: 93 ---CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I + K+ NT NA + ++ + VL+VT HMPR + P
Sbjct: 153 PGDAILLESKSANTYENATRTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAP 212
Query: 150 YPIISHD-----LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+ D L+ + + EY+ L+ + + S
Sbjct: 213 TDVQVGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYDWRGWIDGPAGS 262
>gi|56965774|ref|YP_177508.1| hypothetical protein ABC4016 [Bacillus clausii KSM-K16]
gi|56912020|dbj|BAD66547.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 201
Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKI 83
D S I V R+ +A +L + K+ SG + +L++
Sbjct: 27 DGKSGDCIFVP--GSSKAVEYRVPKAVDLYKQGRARKLLFSGGVSWDETKTPEAVLMKAK 84
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEAS----AWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +A I + ++L+T+ N + + + +L+VT YHMPR +L ++
Sbjct: 85 ALSLGIAAKDILVEDRSLHTKENVLASLLVLDRAIDLHRIKRLLLVTASYHMPRVYLMMR 144
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ +++ P+ + + + E K++
Sbjct: 145 TYMPSWIEYSLCPVDDKTTTAENWHLSPFGRKRVETEARKLISY 188
>gi|163852963|ref|YP_001641006.1| hypothetical protein Mext_3555 [Methylobacterium extorquens PA1]
gi|163664568|gb|ABY31935.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 275
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 36/216 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSVSAIVVLTGE------------- 46
W G+ + ++Q D V I+VL+G
Sbjct: 29 LAWAGVLATFSGLTPLANWALLPLEQRFPAQVDDVRPVDGIIVLSGGIDLTTSRTRGRLE 88
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH-------SVSKDILLQKIPIRQDLAECCID 95
RI +L ++ +G ++ +L +A I
Sbjct: 89 LNDAGDRITALIDLAHRYPQARLVYTGGDPYPTGGRARPTEAVLAAAYLEGIGIAPARIT 148
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI--- 152
+ ++ T NA E E + L++T +HMPR +R+ ++ PYP+
Sbjct: 149 VEARSRTTAENASEVRKLLEPHPGERWLLITSAWHMPRAMGAFRRV--GLELEPYPVDFR 206
Query: 153 ----ISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ + + +L V E+ +++ +
Sbjct: 207 TAGPFATRFTFRHAADGLHLLDVAAKEWAGLVVYRL 242
>gi|156741328|ref|YP_001431457.1| hypothetical protein Rcas_1343 [Roseiflexus castenholzii DSM 13941]
gi|156232656|gb|ABU57439.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 213
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 8/157 (5%)
Query: 36 SVSAIVVLTGE---PIRIERAFELLENQIGEKIFISGVHH-----SVSKDILLQKIPIRQ 87
+ AI+VL GE P R A L + +G S + +++ + +
Sbjct: 50 TADAIIVLGGEAYPPNRTIHALALYHQHRAPVVVFTGGAPPGRPPETSSAQVARRLALAR 109
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L + A +T A + + ++IVT YH R + +
Sbjct: 110 GLPPDVALLADGAQSTYDEAVLVRELVAAHGWRSLMIVTDPYHTRRAVRTFRTLIPNAHV 169
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ +I R E +K+ +
Sbjct: 170 TASAAPFLSPCADPWRCGARIWRYAASELVKMGFYRL 206
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLT----GEP------IRIE 51
R+ + + F + I + + AI+VL G+ R+E
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIISFGFTEKPKKSDAIIVLGCAVYGDAPSPFFKERLE 62
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A +L + G I ISG S+S+ ++ + + +A I + K+ +T N
Sbjct: 63 EALKLYKEGYGRYIIISGGKGPGESISEAEAGKRYFLEKGVASKNILLDNKSFSTYENLL 122
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ EKN+ +IV++ +H+ R + +RI F
Sbjct: 123 FSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|167465736|ref|ZP_02330825.1| hypothetical protein Plarl_24758 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381937|ref|ZP_08055887.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154077|gb|EFX46405.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 233
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 29/192 (15%)
Query: 9 FVCLIFFIMGFIS-FIRYV---KQMHIPDHPSVSAIVVL-----T-----GEPIRIERAF 54
V L + G + F +Q + V +VL T G R+++A
Sbjct: 4 AVFLGILLAGLLWTFYVQWLLSRQDYPALPEGVDTGIVLGAKLETNQASPGLAERLDQAI 63
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
L + + + +SG +++ ++ +++ + E I + +A NT N
Sbjct: 64 SLYNQRKFKHLIVSGGLDKEGDSQITEAEGMRNYLVQKGIPEQAITMEKQAKNTYENLVF 123
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTF----------LELQRINSTVQFIPYPIISHDLEE 159
+ E+ + +I+TH+YH R L +ST F+PY I L
Sbjct: 124 SKRIMEQKGWTSCIIITHEYHGARAMDIADFIALSPAYLSTTDSTHLFMPYHKIREILAF 183
Query: 160 NSSIFKIKILRV 171
F +R+
Sbjct: 184 TKWEFNKWRMRL 195
>gi|148241215|ref|YP_001226372.1| hypothetical protein SynRCC307_0116 [Synechococcus sp. RCC307]
gi|147849525|emb|CAK27019.1| Uncharacterised conserved membrane protein [Synechococcus sp.
RCC307]
Length = 265
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 39/200 (19%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P A++VL G R+ L +
Sbjct: 64 DQAASLTPKSLPEADAVLVLGGGIRPAPAKGQGVEVNEAGDRLLCGVRLWRQGKAPVLIT 123
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + +L Q++ + + + KA T AQ + A + +
Sbjct: 124 SGARVSFTLNDPIAPEAVLSQQLAQELGVPASALLLNEKARTTAEEAQRINQLAAEQGWK 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIP----YPIISHDLEENSSIFK----------- 165
+++VT +HMPR +R S +Q IP Y + + S +
Sbjct: 184 QLILVTSAFHMPRALASFKR-QSELQIIPVACDYQLDPQHQNQAFSWGELLIDLIPSSDA 242
Query: 166 IKILRVLLIEYLKILLLSIQ 185
+ +L E+L +L+ ++
Sbjct: 243 LDQTTQVLKEHLGLLVYQLR 262
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 75.3 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 24/187 (12%)
Query: 24 RYVKQMHIPDHPSV-SAIVVLTGEPIRIER----------------AFELLENQIGEKIF 66
++ M P P+ +AIVVL G R EL +
Sbjct: 64 GKLENMVAPSLPADKAAIVVLGGGQRRTSDPDKAEVSPHTLMRLFGGIELALKFNWPILL 123
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
G + + + +++ + I ++ T N + AS+ H ++VT
Sbjct: 124 CGGSYSQEVPEAMTMAKKVKELFPDLPIYEESQSRTTWENIKNASSILRSLELKHAVLVT 183
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPI-------ISHDLEENSSIFKIKILRVLLIEYLKI 179
H YHMPR L Q + + + P+P+ ++ + I + L E++ I
Sbjct: 184 HGYHMPRAHLIAQGLAPEINWHPFPVGKMADNAPLSIIDFLPGASSLHINSLALKEHVGI 243
Query: 180 LLLSIQL 186
+ I+L
Sbjct: 244 IAYRIKL 250
>gi|149925438|ref|ZP_01913702.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
gi|149825555|gb|EDM84763.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
Length = 274
Score = 75.3 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 36/200 (18%)
Query: 26 VKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFIS 68
V + + P V AIVVL G R+ + L + + +I +S
Sbjct: 80 VLEANRPLPAQVDAIVVLGGGLEGRFDGVRALPDLNDAGDRVWQGARLYKQGVATRIVLS 139
Query: 69 GVHHSVSKDI-----LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G ++ + + E + I + T NA + +
Sbjct: 140 GGQFQTDPRKEAEAPGMKMFMLDMGVPEDALVIEDNSRTTFENAVRTRELLGERA-RSIA 198
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN------SSIFKIKIL---RVLLI 174
+VT +HM R+ L ++ F YP+ + N + K + L V +
Sbjct: 199 LVTSAFHMGRSVLWFEKAG----FTVYPVRTDIRVLNESRAFWEWLPKPQALDESTVAIK 254
Query: 175 EYLKILLLSIQLSLSTQTAS 194
EYL L L + + T +
Sbjct: 255 EYLGRLQLKVSGAYETGGSQ 274
>gi|322382281|ref|ZP_08056191.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153783|gb|EFX46154.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 195
Score = 75.3 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 33 DHPSVSAIVVLTGEPI---RIERAFELLENQIGEKIFISGVHHSVSKDIL----LQKIPI 85
D I V + R+ +A EL + KI SG + ++ + +++ I
Sbjct: 22 DGRQGDCIFVFGSQRSLAYRVPKAIELYKQGRAGKILFSGGNQWEGQEDVEALVMKQGAI 81
Query: 86 RQDLAECCIDIGYKALNTEGNAQ----EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + E I ++ +T N E + +LIVT +HM R +L ++
Sbjct: 82 NEGIPETDIITEIRSTSTRENVLSSLLELDRAMGLHRLKRILIVTTAFHMRRCYLNMRTY 141
Query: 142 NST-VQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+++ P+ E++ ++ + E
Sbjct: 142 MPEWIEYSLCPVDDRKTREDNWFLHETGIQRVTDE 176
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-------TGEP---IRIE 51
R+ + + F + I + V AI+VL T P R+E
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIVSFGFTEKPKKSDAIIVLGCAVYGDTPSPFFKERLE 62
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A +L + G I ISG S+S+ ++ + + +A I + K+ +T N
Sbjct: 63 EALKLYKEGYGHYIIISGGKGPGESISEAEAGKRYLLEKGVASKNILLDNKSFSTYENLL 122
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ EKN+ +IV++ +H+ R + +RI F
Sbjct: 123 FSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|45656706|ref|YP_000792.1| hypothetical protein LIC10815 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828296|ref|NP_713526.2| hypothetical protein LA_3345 [Leptospira interrogans serovar Lai
str. 56601]
gi|45599942|gb|AAS69429.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293386147|gb|AAN50544.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 258
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 23/148 (15%)
Query: 25 YVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFIS 68
Y + + P I+VL G R+ L + KI S
Sbjct: 70 YYPPVSLEQLPKADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRAKKAPKILFS 129
Query: 69 GV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + +V + + + + + + + K+ NT N A +++ ++ V+
Sbjct: 130 GGSGNLFYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTAENKSFAVGLLKEHGWNSVI 189
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYP 151
+VT +HM R+ Q + + IP+P
Sbjct: 190 LVTSSFHMKRSVEIFQE--NGITIIPFP 215
>gi|251796623|ref|YP_003011354.1| hypothetical protein Pjdr2_2614 [Paenibacillus sp. JDR-2]
gi|247544249|gb|ACT01268.1| protein of unknown function DUF218 [Paenibacillus sp. JDR-2]
Length = 219
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 25/192 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIE 51
+ GL + + + I + A +VL G R++
Sbjct: 21 RLFVGLCLLGVLCCGYLLWLINSYDDSKPIE--QADAAIVL-GASLWSDKPSPALKERLD 77
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +SG +++ ++ + + + + + A +T N
Sbjct: 78 FADKLYKDGKVNMFILSGGLDRNGSKLTEAQGMKAYLLAKGIPADKMLLDNAARSTYENL 137
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ A ++ + +L+VTHDYH PR E+ R S L S FK +
Sbjct: 138 LNSKVIAAEHGLNKLLVVTHDYHAPRAM-EMARYLDYENVTAAAFHSEVL----SPFKNQ 192
Query: 168 ILRVLLIEYLKI 179
VL Y K
Sbjct: 193 SREVLA--YAKW 202
>gi|254711639|ref|ZP_05173450.1| hypothetical protein BpinB_15584 [Brucella pinnipedialis B2/94]
gi|261319263|ref|ZP_05958460.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298486|gb|EEY01983.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 205
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC +A +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RAGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPMADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|310642426|ref|YP_003947184.1| protein [Paenibacillus polymyxa SC2]
gi|309247376|gb|ADO56943.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 231
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 33/197 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV-----SAIVVLT---------GEPIRIE 51
+ +IF ++GF+ V M+ + IV+ G R+E
Sbjct: 33 RFILGLMIFILVGFVWAGIRVWNMNTAASTNPLQHAQIGIVLGASMWGAEPSPGLKERLE 92
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L N +++ +SG ++ +Q+ + + + I + +A +T N
Sbjct: 93 EALWLYRNGTVQRLIVSGGLDQPDFPYTEAEGMQRYLVDRGVPVQHILLENQATSTYENL 152
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIPYPIIS---------- 154
+ ++ +++ +I+TH YH PR L + + +++
Sbjct: 153 LYSQRIMKEYDWNSTVIITHSYHGPRAMEIAQFLNFDHPQMALTESKVLNMPIHQSREVL 212
Query: 155 --HDLEENSSIFKIKIL 169
+
Sbjct: 213 AYAKWTLQRWWISAQTW 229
>gi|256059361|ref|ZP_05449563.1| hypothetical protein Bneo5_03263 [Brucella neotomae 5K33]
gi|261323321|ref|ZP_05962518.1| Bme2 [Brucella neotomae 5K33]
gi|261299301|gb|EEY02798.1| Bme2 [Brucella neotomae 5K33]
Length = 205
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGCSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|186681117|ref|YP_001864313.1| hypothetical protein Npun_F0616 [Nostoc punctiforme PCC 73102]
gi|186463569|gb|ACC79370.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 263
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 74/219 (33%), Gaps = 39/219 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRI 50
L C +I + + + + P AIVVL G R+
Sbjct: 47 LLLFCSNAWIAKSLVRSLEWQNLPLAQIPVAEAIVVLGGATKSAFPPRPTVDLSESGDRV 106
Query: 51 ERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
A +L + I +SG + + I + I ++LNT
Sbjct: 107 IYAAQLYRQKRAPIIILSGGRIDWRGGGSPESADMATILTSIGIPSEAIVQEPESLNTYQ 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENS 161
NA E + VL+VT HMPR+ QR + IP P + +L+E
Sbjct: 167 NAVNVRKILESRGINQVLLVTSAMHMPRSLNIFQR--QGINVIPAPTDFLVSQGELQELG 224
Query: 162 SIFKIKILRVL------------LIEYLKILLLSIQLSL 188
K IL +L L EY+ L+ ++ L
Sbjct: 225 GTPKAAILNLLPDTDNLHQFTSALKEYIGSLIYRLRGWL 263
>gi|115380347|ref|ZP_01467350.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115362646|gb|EAU61878.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 233
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 26/184 (14%)
Query: 6 YGLFVCLIF----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--------------- 46
GL V F G + ++ + A++VL G
Sbjct: 19 LGLAVLYTFSIEPVAGGLMRWVESGAKETYRPEVVYDAVIVLGGGLDPDATERSGRPEYN 78
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC-----CIDIGYK 99
RI R +ELL + +SG + +++ +++ L I +
Sbjct: 79 AAVERILRGYELLREGRARHVLLSGGSLDTRPEAVIEATVLQRQLLAWGIAPERIVVEGH 138
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA ++ E+ + +L++T H+PR + + + + + D +
Sbjct: 139 SRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLAADVRASDGKR 198
Query: 160 NSSI 163
S
Sbjct: 199 PPSW 202
>gi|254430947|ref|ZP_05044650.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625400|gb|EDY37959.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 265
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 41/201 (20%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P+ A+VVL G R+ LL +
Sbjct: 64 ERSTALEPASLPAADAVVVLGGGLRPAQPPRRGVEVGEAGDRLLTGVRLLRQGKAPTLVT 123
Query: 68 SG--VHHSVSK-----DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG VH + K + + + +A I + +A T A++ A +
Sbjct: 124 SGGRVHFTAGKPPPPEAEWARDLAVELGIAPERILLAREARTTAEEARDLGAMGRTRGWS 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK------------- 167
VL+VT HMPR QR + ++ + P L + +S
Sbjct: 184 RVLLVTSASHMPRALATFQRRS-GLEVVAVPTDFQ-LPQRASYGAPTLGSALLSVAPDAE 241
Query: 168 ---ILRVLLIEYLKILLLSIQ 185
+ V+L E+L +L+ ++
Sbjct: 242 ALYLSTVMLKEHLGLLVYRLR 262
>gi|78357887|ref|YP_389336.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220292|gb|ABB39641.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 280
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 27/194 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
+ +C++ G + + P +VVL G R A +L ++
Sbjct: 84 AILLCVLG-AGGLLWIAGNATTEYPP--RKADVMVVLGGGLHRAMFAADLYNRGYAPVVY 140
Query: 67 IS--------GV-----HHSVSKDILLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASA 112
+S GV + + + +I + + I + GY ++T G A+ +
Sbjct: 141 VSRTRPRREAGVMKQHGYRMPDEPEMYVRILTDKGVPMRDIRMYGYDLISTVGEAEALAG 200
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
VL+VT H PR + + + PY
Sbjct: 201 ILGDRKL-TVLVVTAPVHAPRAGMVFRHALPRCSILTAGSPYDPFPQ-----RWWNDQDA 254
Query: 169 LRVLLIEYLKILLL 182
R LL+E +K L
Sbjct: 255 ARNLLLEGIKTLFY 268
>gi|293400746|ref|ZP_06644891.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305772|gb|EFE47016.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 189
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 13/148 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-----------TGEPIRIERAF 54
+F+ L + + + K H S +VL T + R+E A
Sbjct: 3 LLIFIILFVLLANLYLYHHFPKPKHPLQDISYDVAIVLGYPCNADGSLSTVQKKRMETAI 62
Query: 55 ELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + ISG V ++ + + + Q + + I + KA NT N + A
Sbjct: 63 NLYHKHCVHHLLISGSCVQNTYIEAEKMAAYALTQKIPKQAIVLETKARNTYENLKYAKC 122
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++N + +++++T HM R + +
Sbjct: 123 ICDENQWENIIVITSPSHMRRAAFFVHK 150
>gi|225024219|ref|ZP_03713411.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
gi|224943244|gb|EEG24453.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 19/213 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGEP-----------I 48
+R W G+ +CL+ ++ V A VVL G
Sbjct: 10 LRQVWRGIKLCLLVLLVQAAWCTWLVYSYSTRTASRRADAAVVL-GAAAWGKNPSPVFRE 68
Query: 49 RIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI L N K+ +G ++ + ++ + I + + +T+
Sbjct: 69 RINHGITLYRNNRVGKLIFTGGTPKAGYMTEAEVARRYARGHGVPNKDILLETTSRDTQQ 128
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + A N V+I++ YH+ R + Q P P + + +
Sbjct: 129 NLENTKALMYNNGLESVVIISDPYHLARAAAVADYVGLDYQTEPTPTSRYSGQSRAKFMA 188
Query: 166 IKILRVLLIEYLKI---LLLSIQLSLSTQTASQ 195
++L ++ ++ ++ + + L ++ A Q
Sbjct: 189 SEVLSLMAFQWWRLSETVAAYGRDYLLSRQAGQ 221
>gi|310823295|ref|YP_003955653.1| hypothetical protein STAUR_6067 [Stigmatella aurantiaca DW4/3-1]
gi|309396367|gb|ADO73826.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 256
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 26/184 (14%)
Query: 6 YGLFVCLIF----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--------------- 46
GL V F G + ++ + A++VL G
Sbjct: 42 LGLAVLYTFSIEPVAGGLMRWVESGAKETYRPEVVYDAVIVLGGGLDPDATERSGRPEYN 101
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC-----CIDIGYK 99
RI R +ELL + +SG + +++ +++ L I +
Sbjct: 102 AAVERILRGYELLREGRARHVLLSGGSLDTRPEAVIEATVLQRQLLAWGIAPERIVVEGH 161
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA ++ E+ + +L++T H+PR + + + + + D +
Sbjct: 162 SRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLAADVRASDGKR 221
Query: 160 NSSI 163
S
Sbjct: 222 PPSW 225
>gi|309781486|ref|ZP_07676222.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308919899|gb|EFP65560.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 168
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 11/160 (6%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPI 85
P IVVL GE R+ A EL ++F+SG + + +++ +P
Sbjct: 16 REEPRLAHADVIVVLGGESGQRVIGAAELYHAGAAPRVFVSGQGDCLLIERRLVMAGVPA 75
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ EC + +T NA+ ++VT YH R ++ +
Sbjct: 76 ERIGHECV------SGSTMENARMTRETLAGQQVQSAILVTSWYHTGRALAVFRKAWPEI 129
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + D S +L EY+K + +++
Sbjct: 130 TWGAQGVFPGDTLAKSVPVYEAGS--ILAEYVKRVWYAVR 167
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P + I++L G R+ +L I ISG
Sbjct: 70 QPPSELNGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYKLDVP-IIISGGQ 128
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
H+ S+ + + I + + E I + ++LNT NA +K+ F+ ++VT
Sbjct: 129 IPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ + V IPYP
Sbjct: 189 FHMKRAVKQFEK--NEVNVIPYP 209
>gi|217976941|ref|YP_002361088.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
gi|217502317|gb|ACK49726.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
Length = 264
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 10/150 (6%)
Query: 45 GEPIRIERAFELLENQIGEKIFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
G+ R+ EL + ++ +G V ++ + ++K + + ++ +
Sbjct: 104 GDGERLIAGIELSKRYPSARLVFTGGSGNLVEQTIVESTGVKKFWLDMGVPPDRMEFESR 163
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA L+VT +HMPR+ +R+ V P +
Sbjct: 164 SRNTWENALFTRDLLRPKPGETWLLVTSAWHMPRSMGIFRRLGFDVIAYPVAYRTSGDSS 223
Query: 160 NSSIFKIKILR-----VLLIEYLKILLLSI 184
+ S + R + E++ +L +
Sbjct: 224 DWSFLRPAFERVPLVVLAFREWIGLLAYRL 253
>gi|225628868|ref|ZP_03786902.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254706062|ref|ZP_05167890.1| hypothetical protein BpinM_03433 [Brucella pinnipedialis
M163/99/10]
gi|254712252|ref|ZP_05174063.1| hypothetical protein BcetM6_02514 [Brucella ceti M644/93/1]
gi|254715323|ref|ZP_05177134.1| hypothetical protein BcetM_02529 [Brucella ceti M13/05/1]
gi|256029727|ref|ZP_05443341.1| hypothetical protein BpinM2_03558 [Brucella pinnipedialis
M292/94/1]
gi|256157879|ref|ZP_05455797.1| hypothetical protein BcetM4_03368 [Brucella ceti M490/95/1]
gi|256253159|ref|ZP_05458695.1| hypothetical protein BcetB_02424 [Brucella ceti B1/94]
gi|260167184|ref|ZP_05753995.1| Bme2 protein [Brucella sp. F5/99]
gi|261217053|ref|ZP_05931334.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220265|ref|ZP_05934546.1| Bme2 [Brucella ceti B1/94]
gi|261313499|ref|ZP_05952696.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261319923|ref|ZP_05959120.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261756588|ref|ZP_06000297.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986738|ref|ZP_06099295.1| Bme2 [Brucella pinnipedialis M292/94/1]
gi|265996388|ref|ZP_06108945.1| Bme2 [Brucella ceti M490/95/1]
gi|225616714|gb|EEH13762.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260918849|gb|EEX85502.1| Bme2 [Brucella ceti B1/94]
gi|260922142|gb|EEX88710.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292613|gb|EEX96109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261302525|gb|EEY06022.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736572|gb|EEY24568.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262550685|gb|EEZ06846.1| Bme2 [Brucella ceti M490/95/1]
gi|264658935|gb|EEZ29196.1| Bme2 [Brucella pinnipedialis M292/94/1]
Length = 205
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPMADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|116622945|ref|YP_825101.1| hypothetical protein Acid_3847 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226107|gb|ABJ84816.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 204
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 13/156 (8%)
Query: 36 SVSAIVVLTGE--PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQD-LA 90
VVL G+ R++ A EL++ +I +SG + ++ ++Q
Sbjct: 45 KADVAVVLAGDYWGYRLQHAAELVKQGYVPRILVSGPPGFYGTNESDAAIHWALQQGYPP 104
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NST 144
E + + ++A +T A+ + ++N H L+VT +YH R
Sbjct: 105 EWFVAVPHQATSTLAEAKVMLTYMRQHNIHSFLLVTSNYHTARARRIFLGAERDSGGGPE 164
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
++ + P + + + +E+ K +
Sbjct: 165 MRVVAAP--DKYFTPEAWWQSREGRKTAFMEWTKTV 198
>gi|146341164|ref|YP_001206212.1| hypothetical protein BRADO4236 [Bradyrhizobium sp. ORS278]
gi|146193970|emb|CAL77987.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 262
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 28/180 (15%)
Query: 32 PDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG----- 69
P + I+VL G R+ +A L ++ +G
Sbjct: 74 PAKGAPDGIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYPNARVLFTGGSANL 133
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + +I +A+ + + ++ NT NA + A L+VT Y
Sbjct: 134 IATDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAPKPGERWLLVTSAY 193
Query: 130 HMPRTFLELQRINSTVQFIPYPI---ISHDLEENS-SIFKIKILRVLLIEYLKILLLSIQ 185
HMPR+ ++ V+ PYP+ + L+ + S+ ++ + + E++ ++ ++
Sbjct: 194 HMPRSVGLFRKAGFPVE--PYPVDWRVGRVLDFDGVSLQGLRRADIAVREWVGLVAYRLR 251
>gi|75906624|ref|YP_320920.1| hypothetical protein Ava_0399 [Anabaena variabilis ATCC 29413]
gi|75700349|gb|ABA20025.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 263
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAF 54
C ++ ++ + + P+ AI+VL G + R+ A
Sbjct: 51 CSNAWVAKYLVRSLEWQNLPPAQLPNAEAIIVLGGATKSVFPPRITPDLSEQGDRVIYAA 110
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+L I +SG S+ + I + + +LNT NA
Sbjct: 111 QLYRQNKAPLIILSGGRIDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVN 170
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENSSIFKIK 167
VL+VT HMPR+ QR V P + + + +L+E + K
Sbjct: 171 VKKILASRGIDKVLLVTSALHMPRSLKIFQRQGMNVIPAPTDFLVSAGELQELGNTPKAA 230
Query: 168 ILRVL------------LIEYLKILLLSIQ 185
IL +L L EY+ + ++
Sbjct: 231 ILNLLPDTYNLHLFTNALKEYVGSFIYWLR 260
>gi|260887636|ref|ZP_05898899.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330837998|ref|YP_004412578.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
gi|260862652|gb|EEX77152.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329745762|gb|AEB99118.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
Length = 252
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVH 71
+ ++G +F D P V LT P R+ A L ++ I +SG
Sbjct: 78 VVIMLGGGAFS---------DAPDVDGEGALTASPSTRLLTAVRL-AQKLDLPILVSGGQ 127
Query: 72 ---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
S + +L ++ + + E I + + NT NA + +++ ++VT
Sbjct: 128 VFQESGKEALLAKRTLVSLGIPESRILVEGASQNTVQNAAYTAKILKEHGLVRPILVTSA 187
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R+ L +++ ++ +PYP
Sbjct: 188 FHMKRSVLNYEKL--GIEVVPYP 208
>gi|308069364|ref|YP_003870969.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305858643|gb|ADM70431.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 228
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 33/197 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVLT---------GEPIRIE 51
+ +IF ++G + V P IV+ G R+E
Sbjct: 30 RLVLCLMIFILVGLVWAGIRVWDMNTAASTTPLQQVQIGIVLGASMWGAEPSPGLKERLE 89
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L N +++ +SG ++ +Q+ + + + I + A +T N
Sbjct: 90 EALRLYRNGTVQRLIVSGGLDKPDFPYTEAEGMQRYLVDRGVPVQHIVLENHATSTYENL 149
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIPYPIIS---------- 154
+ + + +I+TH YH PR L+ + + +++
Sbjct: 150 LYSQRIMSEYGWISTVIITHSYHGPRAMEIAQFLKFDHPQMALTESKVLNMPIHQSREVL 209
Query: 155 --HDLEENSSIFKIKIL 169
+
Sbjct: 210 AYAKWTLQRWWISAQTW 226
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 18/168 (10%)
Query: 1 MRYFWYGLFV--CLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGEP---------- 47
+RY YG + IF + + + A VVL G
Sbjct: 7 LRYLRYGFLLSILSIFALQAWCAWQVYQYAHAPAALPKHADAAVVL-GAAAWGDKPSPVF 65
Query: 48 -IRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI A L +++ EK+ +G S+ + +K ++Q + I ++ +T
Sbjct: 66 RERINHAIALYQSERVEKLIFTGGTRKEGYPSEGEVARKFALKQGIPSHDIIYETRSKDT 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
N +K+ HHV+IV+ YHM R + + P P
Sbjct: 126 YQNLVNTRLLMQKHKLHHVIIVSDPYHMARAIAIARDLGIPATPSPTP 173
>gi|17989186|ref|NP_541819.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
gi|17985041|gb|AAL54083.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 33 DHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQD--L 89
D I+V G R +A +L ++ I +G + ++ + L
Sbjct: 4 DGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILATGDGDCLLNKHIMMAKGVPPSAIL 63
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
EC ++ +T NA+ ++ + + LIVT+ +H R + + F
Sbjct: 64 VEC------RSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTS 117
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLSIQLSLSTQTAS 194
P+ D+ ++ ++ EY K L+S ++ T S
Sbjct: 118 SPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLISGRIRPQNLTDS 163
>gi|85715468|ref|ZP_01046449.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
gi|85697663|gb|EAQ35539.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
Length = 266
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 74/225 (32%), Gaps = 48/225 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFI------SFIRYVKQMHIP---DHPSVSAIVVL--------- 43
R GL I ++ F + + + P D + I++L
Sbjct: 35 RRTGLGLLTAGIAALLIFGYSPLSNVLLLTLSERFPPWHFDGRAPDGIIILGGSIQPPLS 94
Query: 44 --------TGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--- 92
G R+ EL + ++ SG +++ ++ PI L E
Sbjct: 95 VARQTVEIDGAAERVIGGLELAQRFPEARVVYSGGSGQLTEGS-AREAPIAGSLFERFGI 153
Query: 93 ---CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I + ++ T NA+ + L+VT YHMPR+ ++ V+ P
Sbjct: 154 TPERIVLENESRTTYENARFSRELVAPKPGERWLLVTSAYHMPRSIGVFRKAGFEVE--P 211
Query: 150 YPIISHDLEENSSIFKIKILRVL----------LIEYLKILLLSI 184
YP+ D I + L + E++ +L +
Sbjct: 212 YPV---DWRTRGWIDAWRPFNRLTTGLACADIAVHEWVGLLAHWM 253
>gi|312796171|ref|YP_004029093.1| integral membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167946|emb|CBW74949.1| Integral membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 239
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 25/164 (15%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI---------------RIERAFE---LLENQIGE-KIF 66
V P + AIV+L RI+ A L Q + +
Sbjct: 52 VPAASPPRYGGNVAIVLLGSGTEYDDAHRLVPKFDAWRRIDAAAAQFILCRAQRAQCTLV 111
Query: 67 ISGVHHSVSKDILLQKIP---IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+SG + + + + I + +LNT NA+ A ++++ ++
Sbjct: 112 VSGGNPQKHEHSEAANYQPHLVSHGVPAANIVLEPDSLNTYENARNTGAILRRHHYDQIV 171
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++T YH+PR L+ + +P ++ S
Sbjct: 172 LITSAYHLPRALLDFHHF--GIDVVPLA-SNYRWRRPSWRPHPA 212
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 72.6 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 23/193 (11%)
Query: 8 LFVCLIFFIMGF---ISFIRYVKQMHIPDHPSV--SAIVVLTGEP---IRIERAFELLEN 59
+ + ++ I F ++ Y+ +P AIVVL P R A EL +
Sbjct: 76 IALVVLALIATFPPVVTLANYLLVSPLPQDTGARVDAIVVLGRGPISGDRAAVAAELWQA 135
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLA--ECCIDIGYKALNTEGNAQEASAWAEKN 117
K+F+SG + L+K + E C + TE NAQ + +
Sbjct: 136 GRAPKVFVSGRGDAPYLVKELRKYGVSASALASEDC------SQTTEENAQFTARLLQPQ 189
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
H+L++T HM R+++ +R+ + +I H + K + EY
Sbjct: 190 GVQHILLITDSPHMLRSWMTFERVG-------FQVIPHGNALPHWLSHRKHALTVYREYA 242
Query: 178 KILLLSIQLSLST 190
++ ++Q +
Sbjct: 243 GLISYTLQGRIQP 255
>gi|294675706|ref|YP_003576321.1| hypothetical protein RCAP_rcc00149 [Rhodobacter capsulatus SB 1003]
gi|294474526|gb|ADE83914.1| protein of unknown function DUF218 [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 72.6 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 9/135 (6%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L + + + ISG +V + +R +AE + + A NT NA
Sbjct: 40 AIALYRSGLTRTLLISGAGTAVDGSAEWSFYRDHALRAGVAESALLLEKNARNTAENAAF 99
Query: 110 ASAWAEKN----NFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPI-ISHDLEENSSI 163
+A + + +HM R + L+R + V+ + P DL +
Sbjct: 100 GAALIGTELGWAKIRSLAVCAKPFHMRRALMTLRRHVPPEVRLVAQPPDDPGDLSAETWW 159
Query: 164 FKIKILRVLLIEYLK 178
+ + + E K
Sbjct: 160 QTAQGRKRIFTELGK 174
>gi|255068057|ref|ZP_05319912.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047655|gb|EET43119.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 214
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 3 YFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + G+ + ++ + F + + +P H A +VL G
Sbjct: 14 YLFRGIGLSILLVLGIFGEGAWQVYHTGSQPLPGHVRADAALVL-GAAAWDKRPSPIFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ EKI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVEKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
N + ++IV+ YH+ R I S + Y
Sbjct: 133 NIRNIRPILRAEGIGSIIIVSDPYHLARAL----EIASDLDIEAY 173
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 18/149 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RI 50
+ YG+ + + I+ I + + I+VL G R
Sbjct: 6 KLVLYGIGILVFLVIIFAFQVIYFGESSKPE---KSDCIIVL-GCKVYGSTPSPFLIWRT 61
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ L + G+ I +SG S+S+ +++ + + + I + K+ +T N
Sbjct: 62 DEGLRLFKEGYGKYIIVSGGKGQGESISEAEAMKRYLVSKGVDSSKIILEDKSASTMANL 121
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + EK NF +IV++ YH+ R L
Sbjct: 122 INSKSIMEKKNFKTAIIVSNKYHLKRASL 150
>gi|114566272|ref|YP_753426.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337207|gb|ABI68055.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 211
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 23/196 (11%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG-EPIRIERAFELLENQIGEK 64
LF+C+I + + F + D P I+VL G P RI A EL E
Sbjct: 8 ALFICIILLALLAVFFRYAGVGIVSSDSPEKADFIIVLMGSGPDRILGAVELYEKGYAPY 67
Query: 65 ------------IFIS-GVHHSVSKDILLQKIPIRQDLAE-CCIDIGYKALNTEGNAQEA 110
+ S GV L + ++ + E I + A +T+ A
Sbjct: 68 IMMVENWQPGYELLESRGVE-LPRDAELAASVGVQLGIPEEAFIILPGDARSTQDEALIV 126
Query: 111 SAWAEKN--NFHHVLIVTHDYHMPRTFL----ELQRINSTVQFIPYPIISHDLEENSSIF 164
+ + ++ VL+V+ +H R L V+ + P D +
Sbjct: 127 TQYLKEQQAGVDMVLLVSSKFHSKRAAKIFCWALADSGQDVKVLSCPTPYDDFNAAAWWQ 186
Query: 165 KIKILRVLLIEYLKIL 180
+ + ++ EY+K++
Sbjct: 187 SREDAKRVVSEYVKLV 202
>gi|159186332|ref|NP_355852.2| hypothetical protein Atu4812 [Agrobacterium tumefaciens str. C58]
gi|159141466|gb|AAK88637.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 232
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 15/194 (7%)
Query: 3 YFW------YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFE 55
+ W G+ + + G + IVVL G P R +A +
Sbjct: 33 WLWKRNSIVLGVIILGAIGLYGLALVSAGSLLVVEDPPAQADVIVVLGGDGPPRAAQAAK 92
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + ++G ++ + +R + + +L+T NA A
Sbjct: 93 LWHEGKAPLVLVTGYGDC----DFIRDMLVRSGVDFAAVSTECLSLSTWENATFAQPILT 148
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-IISHDLEENSSIFKIKILRVLLI 174
++VT +H R + + +Q+I P + L + +
Sbjct: 149 GMGAKRAILVTSWFHSRRAVKRFRFVMPQIQWISLPAQRTVSLWRLAINGDGVQV---FK 205
Query: 175 EYLKILLLSIQLSL 188
EY K L ++ S
Sbjct: 206 EYAKALFYDVRSSF 219
>gi|15606980|ref|NP_214362.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
gi|2984233|gb|AAC07762.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
Length = 241
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 30 HIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG-----VHHS 73
P+ AIVVL G R+ F LL ++ + I +SG V
Sbjct: 66 KKPEVLKGDAIVVLGGGVYNNGRLKASSFKRLITGF-LLYKELKKPIILSGGASINVIPE 124
Query: 74 VSK-DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHM 131
LL+ + ++ I ++ +T NA+ EK V++VT +HM
Sbjct: 125 AKVMKELLRSFGVPEE----DIYTDVRSRDTFENAKFVKEMCEKLLKCKEVILVTSGFHM 180
Query: 132 PRTFLELQRINSTVQFIPYPI---ISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
PR ++ ++ IPYP S K + + + EY+ +L ++
Sbjct: 181 PRAVGVFKKA--GLEVIPYPTDLKFEGKYNVYSLFPKYSVFYDSSIAIREYIGLLFYKLK 238
>gi|78186865|ref|YP_374908.1| hypothetical protein Plut_1003 [Chlorobium luteolum DSM 273]
gi|78166767|gb|ABB23865.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 196
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 11/185 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIF 66
L V I GF+S + ++ IV+L G+ R+ + EL N ++
Sbjct: 12 LLVAAILAGAGFLS-LGFLLSCQAGTPEKTDVIVILGGDSGRRVRKGAELYRNGYAPRVI 70
Query: 67 ISGVHHS-VSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++G+ L QK + + I + ++ T A + ++N + L
Sbjct: 71 LTGIDERYYRPGKLNWRQKRMVALGVPLSAISVDSRSETTWEEAFNTAETMKRNGWKKAL 130
Query: 124 IVTHDYHMPRT----FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+V+ HM R ++ + I R + E K
Sbjct: 131 VVSDPPHMFRLKSTWMQAFRKTPRSFILIAT--SPEWWNPVLWWKNSISSRFVYSELKKN 188
Query: 180 LLLSI 184
L ++
Sbjct: 189 LFYAL 193
>gi|21241154|ref|NP_640736.1| hypothetical protein XAC0380 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106459|gb|AAM35272.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 201
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I +I Q I+VL RI
Sbjct: 13 WGWRLCMLALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 67
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 68 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNL 127
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 128 EQARTLMERHGLHRAIIVSDPLHMARAL 155
>gi|189500318|ref|YP_001959788.1| hypothetical protein Cphamn1_1378 [Chlorobium phaeobacteroides BS1]
gi|189495759|gb|ACE04307.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 196
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 65/177 (36%), Gaps = 8/177 (4%)
Query: 16 IMGFISFIR--YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH 72
++G + F Y+ + I+VL G+ R+++ L + ++G+
Sbjct: 17 VIGVLVFAGLGYLVSSYQSKPEKADVIIVLGGDDGPRVDKGGSLFNAGYAPNVVLTGIDS 76
Query: 73 SV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
S+ ++ + + I++ + T A + A ++ +++ ++V+
Sbjct: 77 RYYRPSRPNWRERRLAEAGVPQTAINVDTTSETTWEEALNSVAMMQEKGWNNAIVVSDPP 136
Query: 130 HMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
HM R + + S+ FI + + R ++ E K + +
Sbjct: 137 HMLRLHSTWKRAFKGSSKSFILVATSPEWWKPHLWWQNETSYRFVISEIKKNIYYRV 193
>gi|110633719|ref|YP_673927.1| hypothetical protein Meso_1366 [Mesorhizobium sp. BNC1]
gi|110284703|gb|ABG62762.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 266
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 38/215 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQM-------HIPDHPSVSAIVVLTGE------------ 46
+G+F L+ + G+ +F + P V I+VL G
Sbjct: 41 FGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQHVDGIIVLGGGFEGAVNLARGGY 100
Query: 47 -----PIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDI 96
R A L ++ +SG ++ +A I++
Sbjct: 101 ELNDSGDRFVEAAILARRYPEARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIEL 160
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII--- 153
++ +T NA+ + + AE L+VT +HMPR ++ +P+P
Sbjct: 161 DNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQA--GFPILPWPADYKT 218
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
L +++ + ++ + + E++ +L +
Sbjct: 219 TGREKPGLTDDNVLDSLRNTSIGIREWVGLLAYRM 253
>gi|114704894|ref|ZP_01437802.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
gi|114539679|gb|EAU42799.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
Length = 270
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 62/186 (33%), Gaps = 31/186 (16%)
Query: 28 QMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGV 70
+ +P V I+VL G R + L G + SG
Sbjct: 70 ERPVPMPAEVDGIIVLGGAFDTRVARTRGVIELNEAADRASVSVALARTYPGADVLFSGG 129
Query: 71 HHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ ++ + ++ + L + + KA +T NA A A A+ L+V
Sbjct: 130 VAAAFREDIPETQSAEQFYLGLGLDPNRLKLDGKARDTFENAVYAKALADPQPGETWLLV 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLE-ENSSIFKIKILRVL------LIEYLK 178
T YHMPR + + V +PYP+ E + R L + EY+
Sbjct: 190 TSAYHMPRAMGCFRTVGFDV--VPYPVDYRTPEGADVWRPSTATTRNLEKVHFAIREYIG 247
Query: 179 ILLLSI 184
+
Sbjct: 248 LAAYWA 253
>gi|205374987|ref|ZP_03227778.1| hypothetical protein Bcoam_18347 [Bacillus coahuilensis m4-4]
Length = 200
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 8/192 (4%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPI--RIERAFELLE 58
+ W+ ++ + + F R + + P I+VL+G R A +L
Sbjct: 10 KMVWFLFIFVMVLVLAMILLFKRSHTLLVEKNPPVPADVILVLSGGAQGEREAEAAKLYH 69
Query: 59 NQIGEKIFIS--GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ I +S V + ++++ I + + I +T A++A E+
Sbjct: 70 EGYTDTIVVSMAKVGWNTYTGDIMREHLIHLGVPDNAILTYGDVTSTREEAEQAVPLLEE 129
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+++ T +H R +R ++ I P+ + + + +
Sbjct: 130 LAVRKMILTTSSFHSGRAKWIFERTLKEKGIEVISVPVREEEFGSD-WWQTHETRKQGAS 188
Query: 175 EYLKILLLSIQL 186
E LK + +L
Sbjct: 189 ELLKYVWEWFRL 200
>gi|319788557|ref|YP_004148032.1| hypothetical protein Psesu_2977 [Pseudoxanthomonas suwonensis 11-1]
gi|317467069|gb|ADV28801.1| protein of unknown function DUF218 [Pseudoxanthomonas suwonensis
11-1]
Length = 202
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELLEN 59
V I ++ G ++I +V I+VL RI L
Sbjct: 20 VLAILWLGGVAAWINWVGHRDQAQ--RADVIIVLGAAAYDARPSPVFEERIRHGLNLYRA 77
Query: 60 QIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ +G + + ++ + Q+ +RQ + E I I + T N +A +
Sbjct: 78 GYAPVLLFTGGYGTGARFAESQVAQRYAVRQGIPEEAILIETASRTTLQNLLQARELMRE 137
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
H +IV+ HM R +++ P P
Sbjct: 138 RQLHSAIIVSDPLHMSRALRLCRQLGIEATGSPTP 172
>gi|325922970|ref|ZP_08184680.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
gi|325546551|gb|EGD17695.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
Length = 205
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + I+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMLAAIWLVGVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I ++ T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETESRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
Q+A A E++ H +IV+ HM R
Sbjct: 132 QQARALMERHGMHRAIIVSDPLHMARAL 159
>gi|238027594|ref|YP_002911825.1| hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
gi|237876788|gb|ACR29121.1| Hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
Length = 238
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 30/198 (15%)
Query: 4 FWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVL-TG-------------EPI 48
+ + ++ V P +AI+VL G
Sbjct: 29 LALLAGIATGWLTAPLVALAESGVAPAEPPVFAGRTAIIVLGAGIKRHDGLLVPPENGLA 88
Query: 49 RIERAFEL--LENQIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI RA EL + G + + ++G ++ L + + + + + + ++
Sbjct: 89 RIARAAELHSACQRSGARCTVIVTGGDPHRHGTTEADLYAPLLLERGVPPRDLTLERRSR 148
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--- 158
T NAQ + ++ ++VT Y M R L+ R P P+ ++
Sbjct: 149 TTYENAQYTAPILLAKHYDETILVTSSYQMRRALLDFARFG----VTPQPVFANRDRAIC 204
Query: 159 -ENSSIFKIKILRVLLIE 175
L E
Sbjct: 205 GWRPRWTNFVTASRALHE 222
>gi|262195869|ref|YP_003267078.1| hypothetical protein Hoch_2653 [Haliangium ochraceum DSM 14365]
gi|262079216|gb|ACY15185.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 199
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 12/122 (9%)
Query: 31 IPDHPSVSAIVVLTG-----------EPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
AIVVL R++ A L + G ++ ++G + +
Sbjct: 31 PDAIEPADAIVVLGAPVLAPGRLSEVGRERVDAAVSLYQRGAGPRLCVTGGGPAGRVEAD 90
Query: 80 LQKIPIR-QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
R + L E + I +A NTE NA+ A+A V +V+ +H+ R +
Sbjct: 91 AMAAHARARGLPEEALRIERQARNTEENARFAAAMLRAEGCRSVWLVSQPFHLARACVWF 150
Query: 139 QR 140
+R
Sbjct: 151 RR 152
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +G + + V S AI VL G+P R + A EL + I++
Sbjct: 4 LIPITLLLSLGVVWGLNRVA----VAQRSPQAIFVLGGDPQREQFAAELAQTHPDLPIWV 59
Query: 68 S-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S G + ++ + Q R L + Y+A +T N + ++ HV +VT
Sbjct: 60 SSGSNPEYAEWVFSQAGVPRSRLH-----LDYQATDTLSNFTSLADRFQQQGIQHVYLVT 114
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFK 165
DYHM R + + + + F P P+ S + S K
Sbjct: 115 SDYHMRRALVIANIVFASRGITFEPVPVPSD--RASESWRK 153
>gi|241663925|ref|YP_002982285.1| hypothetical protein Rpic12D_2339 [Ralstonia pickettii 12D]
gi|240865952|gb|ACS63613.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 190
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 11/186 (5%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQI 61
W G + + P IVVL GE R+ A EL
Sbjct: 12 LAWIGGCAIVAMAFSAVLVCGAKSWLREEPRLAHADVIVVLGGESGQRVIGAAELYHAGA 71
Query: 62 GEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++F+SG + + +++ +P + EC + +T NA+
Sbjct: 72 APRVFVSGQGDCLLIERRLVMAGVPAGRIGHECV------SGSTMENARMTRQTLAGQQV 125
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
++VT YH R +++ + + + D S +L EY+K
Sbjct: 126 QSAILVTSWYHTGRALAVFRKVWPEITWGAQGVFPGDTLAKSVPVYEAGS--ILAEYVKR 183
Query: 180 LLLSIQ 185
+++
Sbjct: 184 AWYAVR 189
>gi|323142298|ref|ZP_08077130.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
gi|322413182|gb|EFY04069.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
Length = 258
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 33/213 (15%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEP---------------- 47
+ L + ++G + ++ +I P + IVVL G
Sbjct: 46 FLTLLLYFSSTLLGAKLLGQPLENRYIQQQPDAAQVIVVLGGGSVGSAPDGTERGGLMSA 105
Query: 48 --IRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ A L + + ISG VS+ ++ ++I ++ L + I + +A
Sbjct: 106 GAARLLTAARLAKQHSLP-VLISGGQVFRDGVSEALVAERILLQLGLPQEQIIVETQART 164
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYP---IISHDL 157
T+ NA + + + VL++T HMPR+ +R V+ YP ++
Sbjct: 165 TKENAAYTAMHCRERGYQSVLLLTSALHMPRSMQFFERYLGEQGVKVAAYPCDYTLNPQG 224
Query: 158 EENSSIFKI-----KILRVLLIEYLKILLLSIQ 185
+ N + + L EY+ + +Q
Sbjct: 225 KFNPRWLVPQLQAFDVTCMALHEYVGMAGAFLQ 257
>gi|158335605|ref|YP_001516777.1| hypothetical protein AM1_2455 [Acaryochloris marina MBIC11017]
gi|158305846|gb|ABW27463.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 261
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 84/223 (37%), Gaps = 48/223 (21%)
Query: 6 YGLFVCLIFFIM-GFIS--FIRYVKQMHIP--DHPSVSAIVVLTG--------------- 45
GL + ++FF G++ + ++ + P + AIVVL G
Sbjct: 41 VGLALGILFFSANGWVGDGLLYSLEHQYPPLKQDATADAIVVLGGCTRSAHPPRPWVEVS 100
Query: 46 -EPIRIERAFELLENQIGEKIFISGV---------HHSVSKDILLQKIPIRQDLAECCID 95
R+ A +L K+ ++G ++ LL+ + + + +
Sbjct: 101 EAGDRVLYAAKLYREGKAPKVVLAGGRIYWKGGGQAEALDMAELLKIMGVPESA----LL 156
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ +LNT NA ++NN +L+VT +HMPR+ + +V P
Sbjct: 157 LEPDSLNTFENATNVKRVLKQNNIDGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQV 216
Query: 155 HDLEENSSIFKIKILRVL------------LIEYLKILLLSIQ 185
++ EN+ +LR+L E++ L+ ++
Sbjct: 217 TEVNENAGFL-GFVLRLLPDIEALVNTTIAFKEWIGFLMYRLR 258
>gi|75675900|ref|YP_318321.1| hypothetical protein Nwi_1708 [Nitrobacter winogradskyi Nb-255]
gi|74420770|gb|ABA04969.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 280
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 39/185 (21%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGVHHSVS 75
D I+VL G R+ A EL +I SG
Sbjct: 90 DGRDPDGIIVLGGAVDADISVSRGAVETNASAERVIAALELARRFPKARIVYSG-GAGNL 148
Query: 76 KDILLQKIPIRQDLAEC------CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
L + P+ L E I + ++ T+ NA+ + + L+VT Y
Sbjct: 149 IAGLRAEAPVMGRLFEQFGIPRERIVLETRSRTTDENARFTRELVKPESGERWLLVTSAY 208
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSI--------FKIKILR--VLLIEYLKI 179
HMPR+ ++ V+ PYP+ D I + R E++ +
Sbjct: 209 HMPRSVGVFRKAGFDVE--PYPV---DWRTRGWIDAWMPFDKLSAGLARADTAAHEWVGL 263
Query: 180 LLLSI 184
L+ +
Sbjct: 264 LVYRM 268
>gi|34499583|ref|NP_903798.1| hypothetical protein CV_4128 [Chromobacterium violaceum ATCC 12472]
gi|34105434|gb|AAQ61789.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 190
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 33 DHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P IVVL GE R+ A EL +F+SG + LQ + +
Sbjct: 38 PQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRG--- 94
Query: 92 CCIDIGYK--ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
IGY+ + +T NA + +VT +H R ++ V++
Sbjct: 95 ---KIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGM 151
Query: 150 YPIIS-HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + +DL + + ++ + L EYLKIL+ S++
Sbjct: 152 HIVYPGNDLYHSLAWYEAGAV---LTEYLKILVYSVR 185
>gi|311697190|gb|ADQ00062.1| protein containing DUF218 [marine bacterium HP15]
Length = 159
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGV-HHSVSKD-ILLQKIPIRQDLAECCIDIGYKA 100
L R+ A L + ++G S S +++ + + + ++
Sbjct: 13 LESGADRVWHAARLFNASKAPLVLLTGGSDPSHSAASEAMRQFMRDLRVPGQALVLESRS 72
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLE 158
NT NA+ ++ + + +L+VT YHMPR + V + + ++S L
Sbjct: 73 RNTSQNAEYSAEILTEQGVNRILLVTFAYHMPRAKALFEAQGLEVILVATDHEVLSRPLW 132
>gi|116623760|ref|YP_825916.1| hypothetical protein Acid_4672 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226922|gb|ABJ85631.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 207
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 32/190 (16%)
Query: 3 YFWYGLFVCLIFFIM----GFISFIRYVKQMHIPDH----PSVSAIVVLTG-EP------ 47
+ W + + L +I+ + + + P+ AI VL G P
Sbjct: 4 WLWTAVALVLGGYILSAPLAGRWMLERLANQYPEMPVSSCPTADAIAVLAGTGPPRAGEM 63
Query: 48 ------IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E LL ++ ++ + L++IP + L A
Sbjct: 64 RRGEPLNRMEAGITLLRAGRAPRLVMA---TDGEEAKGLREIPDDRVLQL------RPAR 114
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEE 159
+T A+ A + ++H +++VT +HM R E +R + V+ P +
Sbjct: 115 DTADEARRIVGEARQQSWHRLILVTSGFHMGRALREFRRAAERAGVELTVIPFAADPQVY 174
Query: 160 NSSIFKIKIL 169
K
Sbjct: 175 ERWPPAAKSW 184
>gi|153832463|ref|ZP_01985130.1| integral membrane protein [Vibrio harveyi HY01]
gi|148871258|gb|EDL70130.1| integral membrane protein [Vibrio harveyi HY01]
Length = 268
Score = 71.4 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWHEYLGGLWQKLRDNVGQTP 256
>gi|261379601|ref|ZP_05984174.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284798080|gb|EFC53427.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 218
Score = 71.4 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLSGTWQIYRTGSHTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|306840763|ref|ZP_07473510.1| Bme2 protein [Brucella sp. BO2]
gi|306289158|gb|EFM60407.1| Bme2 protein [Brucella sp. BO2]
Length = 189
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 33 DHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQD--L 89
D I+V G R +A +L ++ I +G + ++ + L
Sbjct: 13 DGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILATGDGDCLLNKHIMMAKGVPPSAIL 72
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
EC ++ +T NA+ ++ + + LIVT+ +H R + + F
Sbjct: 73 VEC------RSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFAS 126
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLSIQLSLSTQTAS 194
P+ D+ ++ ++ EY K L+S ++ T S
Sbjct: 127 SPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLISDRIRPQNLTDS 172
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPAERIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRVWPEVAWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EYLK +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLKRAWYAVR 189
>gi|206889829|ref|YP_002248307.1| hypothetical protein THEYE_A0462 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741767|gb|ACI20824.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 235
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 37 VSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKI 83
AIV+L G R+ + + I +SG V +S + +
Sbjct: 74 ADAIVILGGGVYSWASFPEDSSNRLFTGYLVYRKTKLP-IIVSGGAVEGKISDSAAMAAM 132
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + I K+ +T NA + ++ +F V++VT YHM R ++
Sbjct: 133 LKEFGVEDSKIIEENKSRDTAQNALYVAKICKEKSFKKVILVTSAYHMKRAVKFFKQA-- 190
Query: 144 TVQFIPYP 151
++ +PYP
Sbjct: 191 GLEVLPYP 198
>gi|187929799|ref|YP_001900286.1| hypothetical protein Rpic_2729 [Ralstonia pickettii 12J]
gi|187726689|gb|ACD27854.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 192
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 11/162 (6%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPI 85
P IVVL GE R+ A EL + ++F+SG + + +++ +P
Sbjct: 38 REEPRLAQADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGQGDCLLIERRLVMAGVPA 97
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ EC + +T NA+ ++VT YH R +++ V
Sbjct: 98 ERIGHECV------SGSTMENARMTRGTLAGQQVQSAILVTSWYHTGRALAVFRKVWPEV 151
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+ + D S +L EY+K +++
Sbjct: 152 TWGAQGVFPGDTLAKSVPIYEAGS--ILAEYVKRAWYAVRYR 191
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P + I++L G R+ +L I ISG
Sbjct: 70 QPPSELNGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYKLDVP-IIISGGQ 128
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
H+ S+ + I + + E I + ++LNT NA +K+ F+ ++VT
Sbjct: 129 IPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ + V IPYP
Sbjct: 189 FHMKRAVKQFEK--NEVNVIPYP 209
>gi|87301698|ref|ZP_01084538.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
gi|87283915|gb|EAQ75869.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
Length = 266
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 23/140 (16%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
++ P AIVVL G R+ LL +Q + +
Sbjct: 65 ARSARLTPAPVPRGDAIVVLGGGLRAALPPRAGVEVNEAGDRLLSGIRLLRDQRAPLLLL 124
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + ++ I + + + + + + +A T A++ + +
Sbjct: 125 SGGRVSFSGGDPAPAEAISARSLALELGVPADRLLVSDQARTTAEEARDLRRIGQSRGWS 184
Query: 121 HVLIVTHDYHMPRTFLELQR 140
VL+VT HMPR +R
Sbjct: 185 TVLLVTSALHMPRALASFRR 204
>gi|237748053|ref|ZP_04578533.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379415|gb|EEO29506.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 203
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 31/191 (16%)
Query: 2 RYFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP----------- 47
++ L +F I F F + + + A ++L G
Sbjct: 3 KWIKVALVSFCVFLIYIFCSIAWFS------TVDEKKTADAAIIL-GAAAWYKRPSPVFE 55
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI L +N +K+ +G S+ + ++ ++ + E I I ++L T
Sbjct: 56 ERINHGIWLYKNGYVKKLIATGGKSKNAPFSEAFVARRYAMKNQIPEEDILIEEESLTTR 115
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
N Q A E+N+ +IV+ HM R +I + + + + + S
Sbjct: 116 ENLQNAKKLMEENHLSSAIIVSDPMHMRRAM----QIANDLGIKAWSSPTPSTKYASWQA 171
Query: 165 KIKILRVLLIE 175
K ++ L E
Sbjct: 172 K---IQFLFQE 179
>gi|289664371|ref|ZP_06485952.1| hypothetical protein XcampvN_15203 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668148|ref|ZP_06489223.1| hypothetical protein XcampmN_06538 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 205
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMLALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 132 EQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 40/205 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGEP----------- 47
+ +FW + + +S + V Q P P AI++L G
Sbjct: 15 IAFFW---LLSAGWLTAPLLSLAQPVAQTSPPASFAPRT-AIILLGGGTVYNRDKVLVPP 70
Query: 48 ----IRIERAFELLENQIGEK------IFISGVHHS---VSKDILLQKIPIRQDLAECCI 94
RI+ + ++ + +SG + S+ +R+ + I
Sbjct: 71 REVLARIDVSARNYAA--CKRTATVCTVIVSGGNPQRHPASEADTYLPYLLREQVPRSDI 128
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ ++L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS
Sbjct: 129 VLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFGLD----PQPLIS 184
Query: 155 HDLEEN----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 185 SARRARLGVLPRYSNLANAEIALHE 209
>gi|269963112|ref|ZP_06177447.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832076|gb|EEZ86200.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWHEYLGGLWQKLRDNVGQTP 256
>gi|298492074|ref|YP_003722251.1| hypothetical protein Aazo_3520 ['Nostoc azollae' 0708]
gi|298233992|gb|ADI65128.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 76/223 (34%), Gaps = 39/223 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------E 46
L VC ++ + + + + + P AIVVL G
Sbjct: 43 LSLTLLLVCGNAWVAKNLVRSLEWQNIPLAEIPQAEAIVVLGGATKSGVWPRPTVDLSES 102
Query: 47 PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ A +L + I +SG + + + I + I +L
Sbjct: 103 GDRVIYAAQLYRQKKAPIIVLSGGRIDWRGSASQESTDMAAILTSIGIPSEAIIQEPDSL 162
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDL 157
NT NA E VL+VT H PR QR + IP P + +L
Sbjct: 163 NTYQNAVNVKETLENRGIKKVLLVTSAMHTPRALKIFQR--QGIDVIPAPTDFLVSQGEL 220
Query: 158 EENSSIFKIKILRVL------------LIEYLKILLLSIQLSL 188
+E +S K IL +L L EY+ ++ S++ L
Sbjct: 221 QELTSSPKGAILNLLPDTTNLYQFTNALKEYIGSVIYSLRGWL 263
>gi|117924002|ref|YP_864619.1| hypothetical protein Mmc1_0692 [Magnetococcus sp. MC-1]
gi|117607758|gb|ABK43213.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 229
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 9/173 (5%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSV 74
+ G+ +++ P AIVVL G P R + F+LL +++ G V
Sbjct: 49 LGGWKQAAQWLVITQPPAV--ADAIVVLGGGIPTRPKMGFQLLHQGWAKRLIFVGDRPHV 106
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ D A + + + +T + Q + +L+VT YH R
Sbjct: 107 -LTQVGHSYCPACDFARPEVTLLGLSRSTLDDLQRVLPHIQGGLNRRILLVTDPYHTRRA 165
Query: 135 FLELQRIN--STVQ---FIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ + ++ + + + +V+L E+ K L
Sbjct: 166 DWIARHLLNQHGIEVRTISSNAYFKMNAPQTPWWQDLPTRQVVLSEWTKFLFY 218
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPAERIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRVWPEVAWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLK 178
D S +L EYLK
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLK 182
>gi|90419579|ref|ZP_01227489.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336516|gb|EAS50257.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 66/215 (30%), Gaps = 39/215 (18%)
Query: 7 GLFVCLIFFIM-------GFISFIRYVKQMHIPDHPSV-SAIVVLTGE------------ 46
GLFV + G + + PD P I+VL G
Sbjct: 40 GLFVLATATLAVCSLTPLGLVMTAVLEDRFPRPDLPPAIDGIIVLGGAFDTRVARTRGMN 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDI 96
R+ EL + K+ SG + + + + LA + +
Sbjct: 100 ELNDAADRVTAGMELAQRYPKAKLLFSGGVAALLEEDIPETEAAEALYRGLGLAPDRLLL 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+A +T NA A A+ ++VT HMPR + +PYP+
Sbjct: 160 DGRARDTFENAVFAKELAQPKPGEVWVLVTSASHMPRAVGCFRVA--GFDIVPYPVDYRT 217
Query: 157 LEENSSIF-KIKILRVL------LIEYLKILLLSI 184
+ R L + EYL ++ +
Sbjct: 218 PSGPALWRPSSTTTRNLEKVHFAIREYLGLVAYRL 252
>gi|312144373|ref|YP_003995819.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
gi|311905024|gb|ADQ15465.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
Length = 252
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 78/217 (35%), Gaps = 31/217 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA-----IVVLTGE--------- 46
+++ + LIF F + + + + SV IVVL G
Sbjct: 38 IKFLATATLIFLIFISTAFGVKVLLLPLENYAEEISVDLEEDHPIVVLGGGNYYKTDGSA 97
Query: 47 ------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIG 97
R+ +A+EL + I+ GV H + S+ ++ L +
Sbjct: 98 EPSVHSKQRLAKAYELHRTLNTKIIYSGGVGLGHDNFSEADAAKEFLSGLGLESEKYESE 157
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IIS 154
+A +T NA W +N + +VT YHM R+ + + F+ + I
Sbjct: 158 DQARSTYENALYIKKWLNENEIERIYLVTSAYHMYRSARAFRA--QEIDFLAHHSGFIYD 215
Query: 155 HDLEENSSIFKIKILRV---LLIEYLKILLLSIQLSL 188
H + + L+V L E++ I+ ++ +
Sbjct: 216 HKFSWLNYLPNRGALQVNLSALHEWVGIVWYYLRARI 252
>gi|156973875|ref|YP_001444782.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
gi|156525469|gb|ABU70555.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWYEYLGGLWQKLRDNVGQTP 256
>gi|298370445|ref|ZP_06981761.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281905|gb|EFI23394.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 199
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 17/148 (11%)
Query: 2 RYFWYGLFVCLIFFIM-GFIS---FIRY---VKQMHIPDHPSVSAIVVLTGEPI------ 48
+ W G + +++ ++ G++ F R V+ + D + I V
Sbjct: 4 KILWIGTGLVILWLLLFGWVWGNNFYRSRQPVESIAPADTAVILGISVHDEGRQNPCLIS 63
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E EL + +K+ +SG H + + + + I++ + T N
Sbjct: 64 RVEAGVELWKAGKVKKLIMSGGMNHDGYVGAQSMMQTAEKMGIPREVIELEDHSETTHQN 123
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ E++ V+IV+ YH+PR
Sbjct: 124 ILYTAPMIEQD--KSVVIVSSAYHIPRA 149
>gi|17229959|ref|NP_486507.1| hypothetical protein alr2467 [Nostoc sp. PCC 7120]
gi|17131559|dbj|BAB74166.1| alr2467 [Nostoc sp. PCC 7120]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAF 54
C ++ ++ + + + P+ AI+VL G + R+ A
Sbjct: 51 CSNAWVAKYLVRSLEWQNLPMAQLPNAEAIIVLGGATKSVFPPRITPDLSEQGDRVIYAA 110
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+L I +SG S+ + I + + +LNT NA
Sbjct: 111 QLYRQNKAPLIILSGGRIDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVN 170
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENSSIFKIK 167
VL+VT HMPR+ QR V P + + +L+E + K
Sbjct: 171 VKKILVSRGIDQVLLVTSALHMPRSLKIFQRQGMNVIPAPTDFLVSEGELQELGNTPKAA 230
Query: 168 ILRVL------------LIEYLKILLLSIQ 185
IL +L L EY+ + ++
Sbjct: 231 ILNLLPDTYNLHLFTNALKEYVGSFVYWLR 260
>gi|193212745|ref|YP_001998698.1| hypothetical protein Cpar_1090 [Chlorobaculum parvum NCIB 8327]
gi|193086222|gb|ACF11498.1| protein of unknown function DUF218 [Chlorobaculum parvum NCIB 8327]
Length = 196
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 12/190 (6%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQI 61
++ + L + + F+ + IVVL G+ R+E+ EL +
Sbjct: 9 LLFFLITSTLFATVYLGLGFLVSLHSTKPE---KADVIVVLGGDNGLRVEKGTELYKAGY 65
Query: 62 GEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ I ++G+ S S+ ++ + + + I + + T A+ S +K
Sbjct: 66 AKNIVLTGIDSRYYSPSRPNWRERRMLEAGVPKKAITVDIWSETTWEEAENTSDLMDKKG 125
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS--SIFKIKILRVLLIEY 176
++ L+V+ HM R + + + + + + ++ E
Sbjct: 126 WNSALVVSDPPHMLRLHKTWTQAFAGSSKQFILVTTEPEWWHPLFWWRDPFSKQFVINEI 185
Query: 177 LK---ILLLS 183
K LL
Sbjct: 186 KKNIYYLLAY 195
>gi|258591830|emb|CBE68131.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 232
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 68/204 (33%), Gaps = 18/204 (8%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTG--EPIRIERAFELL 57
+R+ + L+ ++ F+ + AI VL G R A L
Sbjct: 6 IRWLIVFPLLGLLLYVGHPFLLRAMGRYLITEDRLQKAEAIAVLAGDGGVGRTLEAVRLY 65
Query: 58 ENQIGEKIFI------SGVHHSVSKDILLQK--------IPIRQDLAECCIDIGYKALNT 103
++ +I + +G I + + + + + + ++ +T
Sbjct: 66 QDGYAPRIILTRQRLPTGYEALTRLGITVPEERHIQWMVLKAMRVPVTAVLQVNERSDST 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
+++ +++VT+ H R L R++ + I P + +
Sbjct: 126 ASEMVHLVRLLKEHRIRTIILVTNKSHSTRASKILARVSRNNLTSISRPTRYDTFDPDGW 185
Query: 163 IFKIKILRVLLIEYLKILLLSIQL 186
R +L EYLK+L +Q
Sbjct: 186 WRSRADARDVLFEYLKLLDYLVQT 209
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 9/166 (5%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEP--IRIERAFELL 57
R + + + + + + P+ P V AIVVL G R+ A L
Sbjct: 5 RQRFLLAAALAVMTTATALLWGGRIIYSNAPEDPLRPVDAIVVL-GGENDGRVPYAVSLA 63
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + ++ IS H + C+ + A T G AQ A +N
Sbjct: 64 EQGLARQVVISNPHDARDPSTNEGCATTDPRFTVTCV-APHPAT-TRGEAQFTRTLAVQN 121
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-SHDLEENSS 162
+ VL+V+ YH+PR QR + + S+D
Sbjct: 122 GWTSVLVVSWRYHLPRARYIFQRCFDG-DLTMHAVPRSYDFSLAKW 166
>gi|289450181|ref|YP_003474931.1| hypothetical protein HMPREF0868_0608 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184728|gb|ADC91153.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 231
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 7 GLFVCLIFFIMG-FISFIRYVKQMHIPDH-PSVSAIVVLTGEP-----------IRIERA 53
GL +CL+F + ++ +Q+ D P I+VL G R+E A
Sbjct: 39 GLVLCLLFLAVPLWMGLAVKGRQISNADDIPKAECIMVL-GARVYKDRPSHMLEGRLEAA 97
Query: 54 FELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG---NAQ 108
L Q +I +SG D ++++ I + + I + + +NT NA
Sbjct: 98 ISLYFKQKAPQILVSGGGAGTDFDEAIVMRRYLISRGVPAESIIMDHAGINTYQSCYNAT 157
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
K + +LI T +YHM R+ ++ P
Sbjct: 158 F------KFGYKKILIATTEYHMQRSLFLATKLGLDCYGYASP 194
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIRASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|313672214|ref|YP_004050325.1| hypothetical protein Calni_0249 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938970|gb|ADR18162.1| protein of unknown function DUF218 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 29/209 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHPSVSAIVVLTGE-----------PI 48
RY + V L F + + I +++ +I IVVL G
Sbjct: 34 RYLLFFFAVMLYLFSISPVKDILIYPIEKDYINLKCDGDIIVVLGGGVYGNGELSEDAFK 93
Query: 49 RIERAFELLENQIG--EKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ + FE G + I +SG S S + +++ + + + E I + + +T
Sbjct: 94 RVVKGFE---KGRGGDKIIIVSGGRVSESYPYEAEVMKDLLVTLGIREGNIIMDKDSKDT 150
Query: 104 EGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINST------VQFIPYPIISHD 156
NA+ E+ V+++T YHM R L ++ F + S
Sbjct: 151 VENAKFTKKIVEEKGIKGDVILITSAYHMKRGILIFKKYGFDNICAAATDFKFDGVYSI- 209
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ S + + L EYL IL I+
Sbjct: 210 YDFLPSASNLNTVSKALKEYLGILFYRIK 238
>gi|119356675|ref|YP_911319.1| hypothetical protein Cpha266_0844 [Chlorobium phaeobacteroides DSM
266]
gi|119354024|gb|ABL64895.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 219
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 7/186 (3%)
Query: 6 YGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGE 63
LFV G F + Y+ ++ I+VL G+ R+++ EL +
Sbjct: 31 ISLFVLTACTSAGIFFISLGYLVSLYAEKPKPADVIIVLGGDNGLRVKKGAELYNDGYAP 90
Query: 64 KIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ++G+ S ++ + + I I ++ ++ A +S EK +
Sbjct: 91 RVILTGIDARFYRPSHPDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWK 150
Query: 121 HVLIVTHDYHMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
++V+ H+ R ++ S QFI P K ++ E+ K
Sbjct: 151 TAIVVSDPPHLFRLHRTWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQK 210
Query: 179 ILLLSI 184
L S+
Sbjct: 211 SLYYSV 216
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R+ EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRS--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|149915963|ref|ZP_01904486.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
gi|149810037|gb|EDM69885.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
Length = 266
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%)
Query: 4 FWYGLFVCLIFFIMGFI----SFIRYVKQMHI--PDHPSVSAIVVLTGEPI--------- 48
FW + + F+ GF+ +R ++Q + PD + I+VL G
Sbjct: 44 FWVNGTLLFVLFM-GFVPLGQLIMRPLEQRYPSAPDIAPPAGIIVLGGGEDGAMSAASGL 102
Query: 49 --------RIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCID 95
R+ L K+ +G VS I+ + + I
Sbjct: 103 PETNGAGDRMSAGVALALAYPDAKLIFTGGSGQFLAGGVSGAIVAKAYFESLGVDPERII 162
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ +A NT NA + + ++VT +HMPR+ P+P+
Sbjct: 163 LEGRARNTAENAAFSRELVDDPRIGPWVLVTSAFHMPRSLATFCAAG-WRDITPFPVDYR 221
Query: 156 DLEENSSIFKIKI----LRVLLIEYLKILLLS 183
+ + + L + + E++ +L
Sbjct: 222 SITDLEFKWDPTGNFEKLNLSIKEWIGLLAYE 253
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 73/219 (33%), Gaps = 39/219 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------------PIRI 50
L VC ++ + + + P+ AIVVL G R+
Sbjct: 47 LLLVCSNAWVAKSLVRSLEWQYLPPNPVPNAEAIVVLGGATKSAYPPRPTVDLSETGDRV 106
Query: 51 ERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
A +L I +SG S+ + + + I +LNT
Sbjct: 107 IYAAQLYRQNKAPIIILSGGRIDWRGGGESESADMANVLTSIGIPSEVIVQEPDSLNTYQ 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENS 161
NA E VL+VT HMPR+ QR + I P + +L+E S
Sbjct: 167 NAVNVKKILESRGIGKVLLVTSAMHMPRSIQIFQR--QGINAIAAPTDFLVSQGELQELS 224
Query: 162 SIFKIKILRVL------------LIEYLKILLLSIQLSL 188
S K IL +L L EY+ + S + L
Sbjct: 225 STPKAAILNLLPDSNNLQQFTSALKEYIGSFVYSWRGWL 263
>gi|153009344|ref|YP_001370559.1| hypothetical protein Oant_2014 [Ochrobactrum anthropi ATCC 49188]
gi|151561232|gb|ABS14730.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 235
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 68/214 (31%), Gaps = 37/214 (17%)
Query: 6 YGLFVCLIFFIM----GFISFIRYVKQMHIPD--HPSVSAIVVLTG-------------- 45
GL + ++FF G + + PD V IVVL G
Sbjct: 13 LGLSIAILFFAAFTTLGSVLLAPLEDRFAKPDAMPQHVDGIVVLGGYMNGDINAGRKGFE 72
Query: 46 ---EPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIG 97
RI A L ++ +SG + + +++ I +
Sbjct: 73 LNSAADRIFEAMRLARLYPDARVIVSGGDGAFFEEAAKEADSTRQMLIDLGFSGERYIYE 132
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
K+ NT NA + A+ L+VT YHMPR+ ++ + +P+
Sbjct: 133 NKSRNTVENAIFSKELAQPKPGETWLLVTSAYHMPRSVGCFRKA--DFDVVAWPVDYKTR 190
Query: 158 EENSSIFKIKI-------LRVLLIEYLKILLLSI 184
++ V + E++ + +
Sbjct: 191 ARERFALYLESPNEALSRFSVAMREWVGLAAYWL 224
>gi|229824827|ref|ZP_04450896.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
gi|229790830|gb|EEP26944.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
Length = 211
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 31 IPDHPSVSAIVVLTGEPIRI--ERAFELLENQIGEKIFISG---------VHHSVS---- 75
I D P S I+ + G + E A L + KI SG ++ V+
Sbjct: 23 IEDEPQDSDIIFIPGSSNWVLAETAASLYKEGKANKIMPSGMYFYKIGRFLNERVTDERY 82
Query: 76 ------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTH 127
+ L + ++ + I I KA NT NA + ++NN +I
Sbjct: 83 KGNFRTEAEFLSSVLVKNGVENKDILIEEKATNTYENAIFSRDLLKENNLTVKKAIICPQ 142
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+H R F+ + V+F P + + +S + ++V+L E K
Sbjct: 143 AFHARRAFMTYSHLFPDVEFYVVPTDTQGITADSWYKTERGIQVVLGELQK 193
>gi|319638788|ref|ZP_07993547.1| periplasmic protein [Neisseria mucosa C102]
gi|317400029|gb|EFV80691.1| periplasmic protein [Neisseria mucosa C102]
Length = 218
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLSGTWQIYRTGLQTLPKDVHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|239617397|ref|YP_002940719.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
gi|239506228|gb|ACR79715.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
Length = 254
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP----SVSAIVVLTGEP----------- 47
GLF L+ +G +++ ++ + + + AIVVL G
Sbjct: 45 ILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLLDTAEAIVVLGGGMIIAPYELEPGD 104
Query: 48 ---IRIERAFELLENQIGEKIFISGVHH----SVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ +AF++ G+ I ++G S+S+ ++ + + E + + A
Sbjct: 105 HTLKRLYKAFQI-HRATGKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVENSA 163
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
NT NA + ++ + +++VT HM R+ + V IPYP
Sbjct: 164 RNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNV--IPYP 212
>gi|313897329|ref|ZP_07830872.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312957699|gb|EFR39324.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 192
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A L + + I ISG V ++ ++ ++ IR + + + +A NT N
Sbjct: 57 RMDAAITLYKEKRVRCILISGGSVRNTYTEADIMAAYAIRCSIPSTALLLERQAKNTYEN 116
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A + + + HV++VT +H+ R
Sbjct: 117 LLYAKTLCDAHAWKHVIVVTSCFHVRRA 144
>gi|315634101|ref|ZP_07889390.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477351|gb|EFU68094.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 247
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 34/144 (23%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLNDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS + L + + K+L T+ NA EK H
Sbjct: 125 SGVSPTGASEGKVSAEELQTFFNVPTKW------LEEKSLTTKENALYTRQLLEKEGIHK 178
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+++HM R L Q+ V
Sbjct: 179 IILVTNEWHMQRAKLLFQQQGFDV 202
>gi|300703293|ref|YP_003744895.1| hypothetical protein RCFBP_10965 [Ralstonia solanacearum CFBP2957]
gi|299070956|emb|CBJ42264.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CFBP2957]
Length = 190
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVASRVFVSGEGDCLLIVRRLVMAGVPAGRIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQPVRSAVLVTSWYHTGRALHAFRRVWPEVAWRARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EYLK +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLKRAWYAVR 189
>gi|299135177|ref|ZP_07028368.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298590154|gb|EFI50358.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 264
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 37/182 (20%)
Query: 35 PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGV-----HH 72
+ I+VL G R+ A L KI +SG H
Sbjct: 77 RAPDGIIVLGGAINPDLTAVRGAPEMNSSAERMTAAAVLARRFPNAKIVLSGGNANPFHP 136
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
++ + +K +A+ I + ++ T NA+ +L+VT YHMP
Sbjct: 137 LSTEAEVGRKFLEDLGVADDRIVMEGRSRTTYENAEFTRPLIHPVAGERLLLVTSAYHMP 196
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSI--------FKIKILRV--LLIEYLKILLL 182
R + V+ YP+ D + + R+ + E++ ++
Sbjct: 197 RAMGVFRAAGFNVE--AYPV---DWRTRGWVDAERPFLTLSGGLGRLDTAVHEWVGLIGY 251
Query: 183 SI 184
+
Sbjct: 252 RL 253
>gi|255513632|gb|EET89897.1| protein of unknown function DUF218 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 295
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 50 IERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+E A LL+ + I SG +++ +++ + + ++++
Sbjct: 97 VEHAVLLLKEGRAKAILFSGGWSFKHRRKPRLTESEGMRRYAVSLGAPASALITEKRSMD 156
Query: 103 TEGNAQEASAWAEK-NNFHHVLIVTHDYHMPRTFLELQRIN 142
T GNA +S K +L+V YHMPR ++
Sbjct: 157 TIGNALYSSKIIRKMRGTKRILLVAVAYHMPRASYIFRKAL 197
>gi|294627587|ref|ZP_06706170.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667213|ref|ZP_06732434.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598218|gb|EFF42372.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602994|gb|EFF46424.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + G+I ++ Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAGWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N ++A
Sbjct: 57 AQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGLHRAIIVSDPLHMARAL 137
>gi|225076794|ref|ZP_03719993.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
gi|224951892|gb|EEG33101.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
Length = 218
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLTGTWQIYRTGLQTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N N +++V+ YH+ R
Sbjct: 133 NMLNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|148255961|ref|YP_001240546.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
gi|146408134|gb|ABQ36640.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
Length = 262
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 28/184 (15%)
Query: 32 PDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG----- 69
P + I+VL G R+ +A L +I +G
Sbjct: 74 PAKGAPDGIIVLGGPVDPDLSIMYGMPVTVAGADRLIQAAALARRYPNARIVFTGGSANL 133
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + I + +A+ + + ++ NT NA + A L+VT +
Sbjct: 134 ISTDAREADVAADILLSLGVAKERLTLERESRNTYENAVFSKAMVAPKPGERWLLVTSAF 193
Query: 130 HMPRTFLELQRINSTVQFIPYPI---ISHDLEENS-SIFKIKILRVLLIEYLKILLLSIQ 185
HMPR+ ++ V+ PYP+ + L+ + S+ ++ + + E++ ++ ++
Sbjct: 194 HMPRSVGLFRKAGFPVE--PYPVDWRVGRVLDVDGVSLLGLRRADIAVREWVGLVAYRLR 251
Query: 186 LSLS 189
+
Sbjct: 252 GRID 255
>gi|209884886|ref|YP_002288743.1| hypothetical protein OCAR_5752 [Oligotropha carboxidovorans OM5]
gi|209873082|gb|ACI92878.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 264
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 34/208 (16%)
Query: 11 CLIFFIMGFI----SFIRYVKQMHIP---DHPSVSAIVVLTG-----------------E 46
+ + GF + + + D + IVVL G
Sbjct: 46 IALLLVCGFSPLGNWLLLPLSERFPAWHDDGRAPDGIVVLGGAISPDLTAERGTAELNAS 105
Query: 47 PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ A EL KI +SG H ++ + + + +A I ++
Sbjct: 106 AERMTAAAELARRFPNAKIVLSGGNANVFHPLSTEAEVGRVLLENLGVAADRIVREDRSR 165
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NT NA + L+VT YHMPR + N V+ P + +E
Sbjct: 166 NTYENAIFTRDVVKPKPGERWLLVTSAYHMPRAIGVFRAANFPVEAYPIDWRTSGWKEAG 225
Query: 162 SIF---KIKILRV--LLIEYLKILLLSI 184
F + R+ E++ ++ +
Sbjct: 226 RPFLKLSAGLARLDTAAREWVGLIGYRL 253
>gi|146279502|ref|YP_001169660.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145557743|gb|ABP72355.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 187
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L ++ + K+ ISG +V + + +AE + + A NT NA
Sbjct: 40 AIALYKSGLTPKLLISGAGVAVDGSTEWSFYRDHALDAGVAESALLLEKAARNTAENAAF 99
Query: 110 ASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISH-DLEENSSI 163
+A EK + + +HM R + L+R V+ + P DL +
Sbjct: 100 GAAVIEKELGWAKVRSLAVCAKPFHMRRAIMTLRRHVPADVRLVAQPPDDPGDLSAETWW 159
Query: 164 FKIKILRVLLIEYLKILLLSIQ 185
+ + E KI +++
Sbjct: 160 QTAPGRQRIFAELGKISEYALK 181
>gi|254412764|ref|ZP_05026537.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180499|gb|EDX75490.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 263
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 72/227 (31%), Gaps = 50/227 (22%)
Query: 6 YGLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------- 46
GL + L+ ++ + + + + P AIV+L G
Sbjct: 43 LGLIILLVASNGWVANSMVQSLEWQHIPPTELPQAEAIVILGGATRSAIPPRPAPDLNEA 102
Query: 47 PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQDLAECCIDIG 97
R+ +L + I SG S +L+ I + I
Sbjct: 103 GDRVFYGAQLYQQGKAPVIIASGGRIEWRGGGSPESADMAQILEMIGVPPSA----ILQD 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----II 153
+LNT NA ++ VL+VT H PR QR ++ IP P +
Sbjct: 159 PASLNTHQNAVNVRRILQQEGIKKVLLVTSAMHTPRALRVFQR--QGIEAIPAPTDFLVT 216
Query: 154 SHDLEENSS------------IFKIKILRVLLIEYLKILLLSIQLSL 188
+L E +S + + + EY+ + ++ L
Sbjct: 217 QQELNEPNSSLAAILLNGLPDAQNLDMTTRAIKEYIGTAVYWLRGWL 263
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +G + + V S AI VL G+P R + A EL + I++
Sbjct: 4 LIPITLLLSLGVVWGLNRVA----VAQRSPQAIFVLGGDPQREQFAAELAQTHPDLPIWV 59
Query: 68 S-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S G + + + + + + + Y+A +T N + ++ HV +VT
Sbjct: 60 SSGSNP-----EYAEWVFGQAGVPRSRLHLDYQATDTLSNFTSLADRFQQQGIQHVYLVT 114
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFK 165
DYHM R + + + + F P P+ + S K
Sbjct: 115 SDYHMRRALVIANIVFASRGITFEPVPVPFD--RASESWRK 153
>gi|192291940|ref|YP_001992545.1| hypothetical protein Rpal_3570 [Rhodopseudomonas palustris TIE-1]
gi|192285689|gb|ACF02070.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 264
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 31/181 (17%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ I+VL G R+ A +L +I SG +
Sbjct: 75 AGRAPDGIIVLGGAIDSELSVARNTLEVDASAERVLAALDLARRYPKARIVYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
SV++ L ++ R LA + + K+ T NA A L+VT +H
Sbjct: 135 QRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVVPKPGELWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILR--VLLIEYLKILLLS 183
MPR+ + + V +PYP+ S D S + R V + E+ +L
Sbjct: 195 MPRSIIAFRAAGFDV--VPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 184 I 184
+
Sbjct: 253 L 253
>gi|167629577|ref|YP_001680076.1| hypothetical protein HM1_1492 [Heliobacterium modesticaldum Ice1]
gi|167592317|gb|ABZ84065.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 252
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 32/184 (17%)
Query: 31 IPDHPSVSAIVVLTGEPIRIER----AFELLENQIGEKIF-------ISGVHHSVSKDIL 79
PD PS I++L G ++ + ++ ++G VS +
Sbjct: 72 PPDKPSGDVIIMLGGGAT-MDTPDIDGLGQMTGGSANRLLTAARLHQLTGAPIIVSAGQV 130
Query: 80 LQKIPIRQDL----------AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + E I + + NTE NA+ + FH ++VT +
Sbjct: 131 FENSGNESRIAFRQLTGLGVPESMIIVEEMSRNTEENARYTKEILDARGFHKPILVTSAF 190
Query: 130 HMPRTFLELQRINSTVQFIPYP----IISHDL----EENSSIFKIKILRVLLIEYLKILL 181
HM R+ ++ V +P+P + + S + + + EYL ++
Sbjct: 191 HMERSVGHFSKL--GVSTLPFPTDYRVNRQARYSLNDWAPSAVAMSNASLAMKEYLGLIP 248
Query: 182 LSIQ 185
L ++
Sbjct: 249 LWLK 252
>gi|39936223|ref|NP_948499.1| hypothetical protein RPA3160 [Rhodopseudomonas palustris CGA009]
gi|39650078|emb|CAE28601.1| DUF218 [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 31/181 (17%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ I+VL G R+ A +L +I SG +
Sbjct: 75 AGRAPDGIIVLGGAIASELSAARNALEVDASAERVLAALDLARRYPKARIVYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
SV++ L ++ R LA + + K+ T NA A L+VT +H
Sbjct: 135 QRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVAPKPGELWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILR--VLLIEYLKILLLS 183
MPR+ + + V +PYP+ S D S + R V + E+ +L
Sbjct: 195 MPRSIIAFRAAGFDV--VPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 184 I 184
+
Sbjct: 253 L 253
>gi|299065943|emb|CBJ37124.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CMR15]
Length = 180
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 13/154 (8%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAE 91
IVVL GE R+ A EL + ++F+SG V + + +P + E
Sbjct: 35 RADVIVVLGGESGQRVIGAAELYHAGVAPRMFVSGGGDCLLIVRRLE-MAGVPAERIGHE 93
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
C ++ +T NA+ ++VT YH R +R+ V +
Sbjct: 94 C------ESGSTMENARMTRRTLAGQPVRSAVLVTSWYHTGRALNVFRRVWPEVAWGARG 147
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ D S +L EY+K +++
Sbjct: 148 VFPGDTFAKSFPIYESGS--ILAEYIKRTWYAVR 179
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|74316470|ref|YP_314210.1| transmembrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055965|gb|AAZ96405.1| probable transmembrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 251
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 30/208 (14%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------------IR 49
L+ ++ G + + P AIVVL+G R
Sbjct: 48 ALYALSTPWVGGLLLKSLEISVPVDPARLQADAIVVLSGGRRMASREYGGDTLNGISLER 107
Query: 50 IERAFELLENQIGEKIFISGVHHS----VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+ A L G + ++G + IL Q + + + AL T
Sbjct: 108 LRYAVRL-HRATGLPLLVTGGNPGGGTLAEGQILAQVLRDDYGIEPRWV--EDAALTTWD 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTF-----LELQRINSTVQFIPYPIISHDLEEN 160
NA+ ++ +K+ H + +VTH +H+ R EL+ I + +QF + L+
Sbjct: 165 NARLSAPLLKKSGVHRIALVTHAWHLRRAVPLFEAQELEVIPAGIQFASTDLDRI-LDLL 223
Query: 161 SSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ L E+L IL ++ +
Sbjct: 224 PTPAGLRDSSFALHEWLGILWYKLRSNF 251
>gi|325267121|ref|ZP_08133790.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
gi|324981474|gb|EGC17117.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
Length = 213
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 17/149 (11%)
Query: 33 DHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHS---VSKDI 78
D P A VVL G RI A L + K+ +G ++
Sbjct: 42 DLPQADAAVVL-GAAAWGNRPSPVFRERINHALTLYQTGYVRKLIFTGGTPKSGYETEAE 100
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + ++Q + E I I ++ +T N +K++ H ++I++ H+ R
Sbjct: 101 VARNFALKQGIPEQDILIEMRSKDTYQNLVNTRFLMQKHHLHDIVIISDPLHIARAMAIA 160
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ ++ + P P + S +
Sbjct: 161 EDLDIKANYSPTP--TSRYHNASWQTQAA 187
>gi|148658348|ref|YP_001278553.1| hypothetical protein RoseRS_4260 [Roseiflexus sp. RS-1]
gi|148570458|gb|ABQ92603.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 193
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 8/162 (4%)
Query: 36 SVSAIVVLTGE---PIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQ 87
+ AIVVL GE P R A L + Q + +G +S + + + +
Sbjct: 30 TADAIVVLGGEAYPPNRTIHALNLYKQQRAPVVVFTGGALPGQPPEISSARVALRYALAR 89
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L + A +T A A + + ++IVT YH R + I VQ
Sbjct: 90 GLPAEVALVVDTAQSTYDEATLVRDLAAHHGWRSLIIVTDPYHTRRAVRTFRSIIPDVQV 149
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
D + +++ R E +K+ + +
Sbjct: 150 TASVAPFLDTFADPLSRGVRVWRYAAAELIKMAFYRLHYGIP 191
>gi|166714094|ref|ZP_02245301.1| hypothetical protein Xoryp_22305 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 205
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W LI+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMPALIWLVAVTGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 132 EQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|84621867|ref|YP_449239.1| hypothetical protein XOO_0210 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574494|ref|YP_001911423.1| hypothetical protein PXO_03633 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424447|gb|AAW73484.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365807|dbj|BAE66965.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188518946|gb|ACD56891.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 205
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 20/150 (13%)
Query: 1 MRYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------I 48
+ + W LI+ + G+I +I Q I+VL
Sbjct: 15 LGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEE 69
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L ++ +G ++ + ++ +R + I I + T
Sbjct: 70 RIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQ 129
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
N ++A E++ H +IV+ HM R
Sbjct: 130 NLEQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|282900121|ref|ZP_06308078.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281195003|gb|EFA69943.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 263
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 78/226 (34%), Gaps = 44/226 (19%)
Query: 5 WYGLFVCLIFFIM-GFI----SFIRYVKQMHIPDHPSVSAIVVLTG-------------- 45
W G+ + ++ G++ + + + P AIVVL G
Sbjct: 40 WIGISLAILIISGNGWVSKSLVASLEWQNIPLEKIPQAEAIVVLGGATKPAAWPRSTVDL 99
Query: 46 --EPIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ A +L + I +SG + + I I + I
Sbjct: 100 NESGDRVIYAAQLYGQKKAPLIILSGGRIDWRGGGTPESADMATILISLGIPPEVIIEEP 159
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IIS 154
+LNT NA E VL+VT H PR+ QR V+ IP P +
Sbjct: 160 NSLNTYENAVNVKKILESRGIKKVLLVTSAMHTPRSLKIFQR--QGVEVIPAPTDFIVSR 217
Query: 155 HDLEENSSIFKIKILRV------------LLIEYLKILLLSIQLSL 188
DLEE + K IL + L EY+ L+ +++ L
Sbjct: 218 SDLEELIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRGWL 263
>gi|260881233|ref|ZP_05403953.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849348|gb|EEX69355.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 266
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 29/176 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVLTGEP--------- 47
R + F+++ P+ P+ I++L G
Sbjct: 51 RAAAVLFALTFAFYLLCTGLVAEKTMGWLESAYQPPERPAGDVIIMLGGGAYSDTPDVDG 110
Query: 48 ---------IRIERAFELLENQIGEKIFISG--VHHSVS-KDILLQKIPIRQDLAECCID 95
R+ A L + SG V+ + + +++ + + E I
Sbjct: 111 TGTLCASPASRLLTAVRLQRQLDVPILL-SGGQVYEDTGAEAKIAKRVLMSLGVPEDKIL 169
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+++NT NA+ ++ +N H ++VT +HM R+ L + V P+P
Sbjct: 170 TETRSINTSQNARFSAEILRENGLSHPILVTSAFHMKRSVLNFAK--QGVAVEPFP 223
>gi|227824083|ref|YP_002828056.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343085|gb|ACP27303.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 261
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 30/175 (17%)
Query: 5 WYGLFVCLIFFIMG------FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ L + ++F + F+ + P ++ I+VL G
Sbjct: 40 FASLGLIVLFLSLFTTTGPYFLQMLEDRFPRPSPPPAEIACIIVLGGAFENVVIASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQD--LAECCIDI 96
R A L + +I +SG + + +
Sbjct: 100 EFNQAADRFVEAVRLAKAYPAARILVSGGDGSISGAYEGDARASQGFFNAFGIGADRVIR 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ T NA+ N +VT YHMPR+ + + + +P+P
Sbjct: 160 EEDSRTTFENARYTKDLLAANGLERCALVTSAYHMPRSVGLFRA--NGIAVVPWP 212
>gi|332975337|gb|EGK12233.1| hypothetical protein HMPREF9373_1599 [Psychrobacter sp. 1501(2011)]
Length = 260
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 20/154 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHP--SVSAIVVLTGE----------P 47
+R W L+ +++ F+ F + + P+ P V AI++L G
Sbjct: 63 LRKIWKTLWAGFGIWLVSFLVFAFTLHSHVRQPNEPFEKVDAIIILGGGIQDGLPTPTLA 122
Query: 48 IRIERAFELLENQIGEKIFISG-VHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L+ Q + SG V ++ + Q + + I K+ +T
Sbjct: 123 SRLDTAVPLIREQPEAIVITSGGVGIGETRSEGEAMAQYLHALYGIPLDDIYQEKKSTST 182
Query: 104 EGNAQEASAWAEKNNF---HHVLIVTHDYHMPRT 134
E N + N + IVT D+HMPR+
Sbjct: 183 EENFLFSQKILTDKNISLKDPIAIVTSDFHMPRS 216
>gi|160941542|ref|ZP_02088874.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
gi|158435507|gb|EDP13274.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
Length = 238
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 26/188 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI---- 48
GL CL F++ + + D + I+VL G P
Sbjct: 14 LLVLGLAGCLFLFLINLYMIRKEKPNIISSDDAAALGDVDCIMVLGCSVRPDGTPSGMLR 73
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEG 105
R+++ EL E+ + +++ +SG H + D + +++ I + + I + + +T
Sbjct: 74 DRLDKGIELYEDGVSDRLLMSGDHGRKNYDEVNRMKQYAIDEGIPSGDIFMDHAGFSTYE 133
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + ++IVT YHM R + + Y + S + K
Sbjct: 134 SMYRARDIFQ---VKKIIIVTQRYHMYRAL----YVAQAMGMEAYGVESDPRQYGG--QK 184
Query: 166 IKILRVLL 173
++ LR LL
Sbjct: 185 MRDLRELL 192
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 35/196 (17%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA--------IVVLTGEP-------------- 47
+ +F+++ + + P S +A I++L G
Sbjct: 1 MIALFWLLAAGWLTAPLLDLAQPQRQSAAAATFAPRTAIILLGGGTIYDDDNVLVPPHDV 60
Query: 48 -IRIERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RIE + ++ +SG + S ++ +RQ +A I +
Sbjct: 61 LSRIEVSARNYAACKRTANICQVIVSGGNPQRHSATEADTYLPYLLRQQVARSDIVLEKT 120
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ T NA+ SA ++++ +++VT YHMPR L+ Q P P IS
Sbjct: 121 SRTTYENARNVSAIVGQSHYDTLILVTSAYHMPRALLDFQCFG----VEPQPQISSARRA 176
Query: 160 NSSIFKIKILRVLLIE 175
+ + +L E
Sbjct: 177 RLGVL-PRFENLLAAE 191
>gi|144900194|emb|CAM77058.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 167
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L+ + + +SG V+H + ++++ + + + I + ++ NT
Sbjct: 30 ARRVAHAATLVHSGRVAHLLMSGGAVNHPTPEALVMRDLAMAAGIDADRIVVEDQSRNTI 89
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
GNA+ + + +L+VT +H+PR L R V
Sbjct: 90 GNARYCAPIIVAQGWTRLLLVTDSFHLPRARLIFARHGLKVAL 132
>gi|86355763|ref|YP_467655.1| hypothetical protein RHE_CH00103 [Rhizobium etli CFN 42]
gi|86279865|gb|ABC88928.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 262
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 24/157 (15%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHHSVSK---------DILLQKIPIRQD-LAECCI 94
G R A L + +I ISG S+S + I +D L E
Sbjct: 103 GGADRFIEALRLAQKFPQSRILISGGDGSISGIYEGDAAASERFFPLFGIGKDRLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP--- 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ERQSRTTFENAVNTREFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWPTDY 215
Query: 152 ----IISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ L+ + + + E+ ++ +
Sbjct: 216 RTDGQVRPGLDFTQPNLNAQSMATAIREWYGLIGYYL 252
>gi|46202066|ref|ZP_00208367.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E L + + +SG V H+ + +++ + ++ L + + + NT
Sbjct: 31 ARRVELGVRLARDGKVAHLLMSGGAVRHTTPEAHVMRAMALQSGLDPDRLHVEDASRNTI 90
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF-IPYPIISHDLEENSSI 163
GNA + E + +LI+T HM R R+ + +P + E +
Sbjct: 91 GNALMSRPMIEARGWTRLLIITDACHMARALYIFHRLGLKARPAAAWPETNPGPEWYMAW 150
Query: 164 FK 165
+
Sbjct: 151 LR 152
>gi|21229858|ref|NP_635775.1| hypothetical protein XCC0380 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766735|ref|YP_241497.1| hypothetical protein XC_0392 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989803|ref|YP_001901813.1| hypothetical protein xccb100_0407 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111359|gb|AAM39699.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572067|gb|AAY47477.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731563|emb|CAP49738.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 205
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I ++ Q I+VL RI
Sbjct: 17 WGWRLCMLALIWLVGVAGWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L + +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYARGYAPHLLFTGGFGNGARFAESQVARRYALRHGVPSEAIVIETSSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+A A E++ H +IV+ HM R
Sbjct: 132 LQARALMERHGMHRAIIVSDPLHMARAL 159
>gi|124007832|ref|ZP_01692534.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123986778|gb|EAY26559.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 256
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKDI----LLQKIPIRQDLAECCI 94
V L RI +A L +KI ISG + LL+++ ++ + I
Sbjct: 96 VYLDKGGDRITQALMLYRVGKIKKILISGGSFDPKQRLERAEAYLLKQVLLQAKVPSHDI 155
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I KA NT NA + K L++T +H+ R ++ ++ P+ +
Sbjct: 156 IIETKARNTRENALNTAKILNKQFPRQSYLLITSAFHIRRAVGCFRQA--GIRVTPFSVD 213
Query: 154 SHDLEEN--------SSIFKIKILRVLLIEYLKILLLSI 184
+ +++ + + VL E + ++ +
Sbjct: 214 FYTIDKGFTFPFSLFPAEKALYKWYVLSHEVIGYIVYKV 252
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 2 RYFWYGLFVCLIFFIM----GFISFIR---YVKQMHIPDHPSVSAIVVLTGE-------- 46
R W + I F + F+ F+ Y+K+ +IPD + IV+L G
Sbjct: 34 RQIWRFFLILSIVFYLISSPFFVYFLSKSFYIKEKNIPDSQNS-VIVILGGGITFFDGKY 92
Query: 47 ------PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ + FE+ I ISG + +S+ +++ I + + I +
Sbjct: 93 EVGNHTLKRLLKGFEIYRKTNAP-IIISGGVIGKGISESAIMKDILVTFGVNINDIIVED 151
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPII- 153
KA T+ NA S + NF ++++VT HM R+ + ++ + IP YPI
Sbjct: 152 KARTTKENAIFVSKLLKGKNFENIILVTSFLHMKRSIMLFEKYSKK-NIIPIVCDYPIDF 210
Query: 154 -SHDLEENSSIFKIKILRVLLIEYLKIL 180
+ L+ S + + E+ IL
Sbjct: 211 RNSFLDYLPSAEALYTFSQITHEFFGIL 238
>gi|302039339|ref|YP_003799661.1| hypothetical protein NIDE4067 [Candidatus Nitrospira defluvii]
gi|300607403|emb|CBK43736.1| conserved protein of unknown function DUF218 [Candidatus Nitrospira
defluvii]
Length = 270
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 25/154 (16%)
Query: 31 IPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHS 73
A+VVL G R +L + + K+ ++G +
Sbjct: 83 PASASKFDAVVVLAGGVFQKGSLRPADEVSDASRQRTSCGTDLWKQNLAPKLLLTGGDAT 142
Query: 74 VSKDILL-----QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L+ ++ IR + E I ++ T NA + + +L+VT
Sbjct: 143 VFRTGLMESHEMKRWAIRLGVPESAILTEEQSRTTYENAVQTKSML---GSGRILLVTAA 199
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
YH+PR ++ V P S + +
Sbjct: 200 YHLPRAVRLFEKQGFVVTPFPCGFESQHTPQQAW 233
>gi|78045951|ref|YP_362126.1| hypothetical protein XCV0395 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929410|ref|ZP_08190538.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
gi|78034381|emb|CAJ22026.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540185|gb|EGD11799.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
Length = 183
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + G+I +I Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N ++A
Sbjct: 57 AQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGLHRAIIVSDPLHMARAL 137
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ + + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|251792809|ref|YP_003007535.1| molybdate ABC transporter permease [Aggregatibacter aphrophilus
NJ8700]
gi|247534202|gb|ACS97448.1| molybdate ABC transporter permease protein [Aggregatibacter
aphrophilus NJ8700]
Length = 248
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 30/136 (22%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R A +L L+ + + ISG
Sbjct: 69 DHLTLNDYRQAQAIVLL-GGGVRDSKELYAPLASSAVQLERLRYAAYLQKETQLPLLISG 127
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
V + VS L + + K+L T+ NA EK + ++
Sbjct: 128 VSPTGASEAKVSMQELQDFFNVPTQW------LEEKSLTTKENALFTRQLLEKEGINKII 181
Query: 124 IVTHDYHMPRTFLELQ 139
+VT+++HM R L +
Sbjct: 182 LVTNEWHMQRAKLLFE 197
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLGLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|16330498|ref|NP_441226.1| hypothetical protein sll1606 [Synechocystis sp. PCC 6803]
gi|1652989|dbj|BAA17906.1| sll1606 [Synechocystis sp. PCC 6803]
Length = 262
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 29 MHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVH- 71
+ + D P IVVL G R+ ++ + I +G
Sbjct: 69 LPMEDFPQAPVIVVLGGGLYQATYPRQFPEVAEAGDRVIYGAQIYQEGKAPYIITTGGRI 128
Query: 72 -----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ S+ + + R D+ I K+LNT NA ++ + +++VT
Sbjct: 129 PWLGTVATSEAEDMALLLQRLDVPREAIIKEEKSLNTRQNAVFTQKILQQRGINTIILVT 188
Query: 127 HDYHMPRTFLELQRINSTVQFIP 149
YHMPR +++ + IP
Sbjct: 189 SGYHMPRAKRVFEKL--GIIVIP 209
>gi|187778517|ref|ZP_02994990.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
gi|187772142|gb|EDU35944.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
Length = 181
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K + + + + I + K+ NT
Sbjct: 49 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVEKGVDKNFIILEDKSKNTLE 108
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 109 NIKFSKKKMEDNNLKSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVKPHMSHEIVGF 166
Query: 166 IKILRVLLIEYLKIL 180
+ + LL+ Y+K +
Sbjct: 167 FREIPALLVYYVKTI 181
>gi|91977540|ref|YP_570199.1| hypothetical protein RPD_3072 [Rhodopseudomonas palustris BisB5]
gi|91683996|gb|ABE40298.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 264
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 27/179 (15%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ + I+VL G R+ A EL +I SG +
Sbjct: 75 NGRAPDGIIVLGGAVDSEVSAARSSLEIDSSAERVVAALELARQYPQARIIYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+SV++ + ++ R +A + + K+ T NA L+VT +H
Sbjct: 135 ANSVAEAPIAGELLARFGVAPDRVVLESKSRTTAENASFTRELVSPKPGEVWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-----IKILRVLLIEYLKILLLSI 184
MPR+ + + VQ P + + + F + + V + E+ +L +
Sbjct: 195 MPRSIEAFRAVEFDVQAYPVDWRTRGWRDAALPFDRLSSGLARMDVAVHEWAGLLAYRL 253
>gi|261868380|ref|YP_003256302.1| molybdate ABC transporter permease [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413712|gb|ACX83083.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 247
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 34/138 (24%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLEDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS LL + + K+L T+ NA EK +
Sbjct: 125 SGVSPTGASEAKVSAQELLDFFHVPTKW------LEEKSLTTKENALYTRQLLEKEGINK 178
Query: 122 VLIVTHDYHMPRTFLELQ 139
+++VT+++HM R L +
Sbjct: 179 IILVTNEWHMQRAKLLFE 196
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
Query: 33 DHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVH----- 71
+ P AIV+L G R+ +L + +G
Sbjct: 73 ELPEADAIVILGGATKPPFPPRPTPEVDEAGDRVLYGAQLYREGKAPWVIPAGGRIVWGS 132
Query: 72 ---------HSVSKDILLQKIPIRQDLAECCIDIG---------YKALNTEGNAQEASAW 113
S S + P +D+A+ D+G ++LNT NA
Sbjct: 133 SSNNSSQRLSSESGQSSQRLAPESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRKI 192
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKIL 169
++ +F VL+VT HMPR+ L +R + IP P + H+L+E SS + +L
Sbjct: 193 LDQRDFPKVLLVTSAIHMPRSVLVFRR--QGIDVIPAPTDFLVSQHELDEPSSSSQAALL 250
Query: 170 RVL------------LIEYLKILLLSIQ 185
L + EY+ I+ I+
Sbjct: 251 HSLPNAEQLSRITRAIKEYIGIVAYRIR 278
>gi|326390031|ref|ZP_08211593.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993896|gb|EGD52326.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
Length = 192
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVL-------TGEP---IR 49
M+ + + ++ F+ I+ + + + P I+VL T P R
Sbjct: 1 MKLLLRFIGILIVIFVTVVITLEYQIISFALYEKPKKSDVIIVLGCAVYGKTPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L + G+ I +SG ++S+ ++ ++ + E I K+ +T N
Sbjct: 61 LDEALRLYKEGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGIPEKIILTDDKSFSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ +KN+ +I+++ +H+ R + +RI+ F I + L + + +
Sbjct: 121 LLFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIDINASFSGVFIKRYMLSDEA-YGFL 179
Query: 167 KILRVLLIEYLK 178
+ + LL YLK
Sbjct: 180 REIPALLYTYLK 191
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + FI+ +I F+ + +P AI++L G RI A E I+ +G
Sbjct: 5 ILFLGFILFWIGFVPLRLAIAHQQYPQPQAILLLEGHRQRIPFAAEFWNQHPTLPIWFTG 64
Query: 70 VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ + Q+ + ++ I ++ +T N + + HHV ++T
Sbjct: 65 -SRTDRPRNQRIFQQAGVPAEM----IHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITS 119
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKILLLSI 184
DYHMPR L + + F P + + ++ + ++ LR +L + S+
Sbjct: 120 DYHMPRASAIATLVLGSQGIVFTPVSVPTSPPKQENQWRTLRDCLRSVLWMVTGVTGASL 179
Query: 185 QLSLSTQTA 193
+ A
Sbjct: 180 RSYFQPNIA 188
>gi|261365693|ref|ZP_05978576.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288565787|gb|EFC87347.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 224
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 3 YFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + G+ + ++ + F + + +P H A +VL G
Sbjct: 14 YLFRGIGLSILLILGIFSVGAWQVYHTGSQPLPRHVRADAALVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ EKI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVEKIVFTGGTSKKGYMTEAEVGRRYALKQGIPAHNIIFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
N + ++IV+ YH+ R I S + Y
Sbjct: 133 NIRNIRPILRAEGIESIIIVSDPYHLARAL----EIASDLDIEAY 173
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 32/165 (19%)
Query: 8 LFVCLI--FFIMGFISFIRYVKQMHIPDHPSVSA--------IVVLTGEP---------- 47
L +C+I F+++ + + P S A I++L G
Sbjct: 47 LVICMIALFWLLAAGWLTAPLLDLAQPQRQSAEAATFAPRTAIILLGGGTIYDHDHVLVP 106
Query: 48 -----IRIERAFELLENQI----GEKIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RIE + + ++ +SG + S ++ +RQ + I
Sbjct: 107 PRDVLSRIEVSAQNYAACKRTAIVCQVIVSGGNPQRHSATEADTYLPYLLRQQVPRSDIV 166
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + T NA+ S ++++ +++VT YHMPR L+ QR
Sbjct: 167 LEKSSRTTYENARNVSVIVGQSHYDKLILVTSAYHMPRALLDFQR 211
>gi|293392078|ref|ZP_06636412.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952612|gb|EFE02731.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 247
Score = 68.3 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 34/138 (24%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLEDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS LL + + K+L T+ NA EK +
Sbjct: 125 SGVSPTGASEAKVSAQELLDFFHVPTKW------LEEKSLTTKENALYTRQLLEKEGINK 178
Query: 122 VLIVTHDYHMPRTFLELQ 139
+++VT+++HM R L +
Sbjct: 179 IILVTNEWHMQRAKLLFE 196
>gi|167039302|ref|YP_001662287.1| hypothetical protein Teth514_0643 [Thermoanaerobacter sp. X514]
gi|256752180|ref|ZP_05493045.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913942|ref|ZP_07131259.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307725373|ref|YP_003905124.1| hypothetical protein Thet_2282 [Thermoanaerobacter sp. X513]
gi|166853542|gb|ABY91951.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X514]
gi|256748908|gb|EEU61947.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890627|gb|EFK85772.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307582434|gb|ADN55833.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X513]
Length = 192
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVL-------TGEP---IR 49
M+ + V ++ F+ I+ + + + P I+VL T P R
Sbjct: 1 MKLLLRFIGVLIVIFVTVVITLEYQIISFALYEKPKKSDVIIVLGCAVYGKTPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L + G+ I +SG ++S+ ++ ++ + E I K+L+T N
Sbjct: 61 LDEALRLYKEGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGIPEKIILTDNKSLSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ +KN+ +I+++ +H+ R
Sbjct: 121 LFFSKEIMDKNSLKTAIIISNKFHLKRA 148
>gi|154249896|ref|YP_001410721.1| hypothetical protein Fnod_1217 [Fervidobacterium nodosum Rt17-B1]
gi|154153832|gb|ABS61064.1| protein of unknown function DUF218 [Fervidobacterium nodosum
Rt17-B1]
Length = 219
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 22/172 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAI--VVLTGEPI----------- 48
+ + L L+F+ + F + + + I VVL G
Sbjct: 15 KLAFLFLSFALVFYFLTSNLFAYLISKTFVLKDTEDKGIFIVVLGGGVDEFSNNVEIGKH 74
Query: 49 ---RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ +A EL +N KI ++G + V + ++++ + + + E I +G KA NT
Sbjct: 75 TLRRLYKALELYKN-RPRKIIVTGGIIDKGVPEALIMKNVLLNFGVPEEDIILGSKARNT 133
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
N + + +VT HM R+ ++ V F+ +
Sbjct: 134 FENGKCTFELI---GDVPITLVTSTIHMKRSLFVFRKFFKDVSFVSADVPVD 182
>gi|150398639|ref|YP_001329106.1| hypothetical protein Smed_3453 [Sinorhizobium medicae WSM419]
gi|150030154|gb|ABR62271.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 262
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 33/213 (15%)
Query: 3 YFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE-------------- 46
F + +F G F+ + P+ ++ ++VL G
Sbjct: 42 VFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELACMIVLGGAFENVVMASRGGIEM 101
Query: 47 ---PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDIGY 98
R L G +I +SG S+S + +
Sbjct: 102 NQAAERFVETLRLARAHPGARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIREG 161
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII---SH 155
++ T NA+ +N +VT YHMPR+ + + ++ P+P+ S
Sbjct: 162 ESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRA--NDIEVTPWPVDYRTSG 219
Query: 156 DLEENSSIFKIKILRVLLI----EYLKILLLSI 184
+ + + L E+ +L +
Sbjct: 220 KVRLGVDFTQPSLNAQLATTAAKEWTGLLAYYL 252
>gi|28897807|ref|NP_797412.1| hypothetical protein VP1033 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838515|ref|ZP_01991182.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260876969|ref|ZP_05889324.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260898706|ref|ZP_05907202.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900663|ref|ZP_05909058.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806020|dbj|BAC59296.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748082|gb|EDM58941.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089504|gb|EFO39199.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093685|gb|EFO43380.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308106719|gb|EFO44259.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|328473218|gb|EGF44066.1| hypothetical protein VP10329_21110 [Vibrio parahaemolyticus 10329]
Length = 261
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYDGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P ++E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIDEVSQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELFWHEYLGSVWQRLRDTVGQTP 256
>gi|282896704|ref|ZP_06304712.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
gi|281198422|gb|EFA73310.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
Length = 263
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 73/221 (33%), Gaps = 43/221 (19%)
Query: 9 FVCLIFFIMGFISFIR----YVKQMHIPDHPSVSAIVVLTG----------------EPI 48
L+ G++S + + P AIVVL G
Sbjct: 45 LAILMIAGNGWVSKALVGSLEWQNIPPGKIPEAEAIVVLGGATKPAAWPRSTVDLNESGD 104
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDIL--LQKIPIRQDLAECCIDIGYKALNT 103
R+ A +L + I +SG + I I + I +LNT
Sbjct: 105 RVIYAAQLYGQKKAPLIILSGGRIDWRGSGPPESADMAAILISLGIPPEVIIEEPNSLNT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEE 159
NA E VL+VT H PR+ QR V+ IP P + DLEE
Sbjct: 165 YENAVNVRKILESRGIKKVLLVTSAMHTPRSLKIFQR--QGVEVIPAPTDFIVSRSDLEE 222
Query: 160 NSSIFKIKILRV------------LLIEYLKILLLSIQLSL 188
+ K IL + L EY+ L+ +++ L
Sbjct: 223 LIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRGWL 263
>gi|225025892|ref|ZP_03715084.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
gi|224956789|gb|EEG37998.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
Length = 213
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 30/180 (16%)
Query: 36 SVSAIVVLTGEPIR---IERAFELLENQIGEKIFISGVHHSVS----------------- 75
AI + R E A L ++ + SG + V
Sbjct: 34 KADAIFIP--GCARPEHTEEAARLYKDGYAPLLLPSGGYTKVQGSFQGVSKEGQKYGADF 91
Query: 76 --KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHM 131
+ L+ + I+ + I +A T NA++ EK + H ++ +H
Sbjct: 92 ACEADFLEAVLIQNGVPASAILKECEATYTLENAEKTKVLLEKKDIHLKKAILCCKAHHS 151
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK----ILLLSIQLS 187
R++L + ++ + YP++ + + +V+L E+ + +L++ +++
Sbjct: 152 RRSYLYYSMVFPEIEILVYPVVVDGISREDWYKTAEGRKVVLGEFSRMGQQLLMMEGRIA 211
>gi|13470862|ref|NP_102431.1| hypothetical protein mll0674 [Mesorhizobium loti MAFF303099]
gi|14021605|dbj|BAB48217.1| mll0674 [Mesorhizobium loti MAFF303099]
Length = 265
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 37/195 (18%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERAFELLENQI-----GEKIF---------------IS 68
P V IVVL G E A L G+++ +S
Sbjct: 70 PRPPLPQKVDGIVVLGGGF---EGAINLARGGYELSSSGDRMVETAILARRFPLAKVVVS 126
Query: 69 GVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G H + ++ + ++ + + K+ NT NA + E L
Sbjct: 127 GGHGAFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPKPGETWL 186
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISH-------DLEENSSIFKIKILRVLLIEY 176
+VT +HMPR + +P+P+ H L +++I ++ + L E+
Sbjct: 187 LVTSAFHMPRAKALFDKA--GFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIALREW 244
Query: 177 LKILLLSIQLSLSTQ 191
+ + + +
Sbjct: 245 IGLFAYWLSGRIDQP 259
>gi|163802067|ref|ZP_02195963.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
gi|159174208|gb|EDP59016.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
Length = 268
Score = 68.0 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAEDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E S
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFHAA--GIKPIPAPTNFMAIDEIEQSWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L E+L L ++ ++
Sbjct: 223 YAPKARYLEQTELYWYEFLGGLWQKLRDNVGQTP 256
>gi|308125795|ref|ZP_07663526.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
gi|308113292|gb|EFO50832.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 67.6 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 34 RLTEGIRILRMYPGAKLILSGYDGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 93
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P ++E
Sbjct: 94 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIDEVSQPWDK 148
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 149 YSPKARYLEQTELFWHEYLGSVWQRLRDTVGQTP 182
>gi|292670312|ref|ZP_06603738.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648043|gb|EFF66015.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 252
Score = 67.6 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 22/145 (15%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP---IRIERAFELLENQIGEKIF--------------ISG 69
+ +P HP IV+L G +R +L ++ +SG
Sbjct: 67 RTYEVPVHPQGDIIVMLGGGAIADVRDVDGTGMLAQSPSSRLLAVLRLHRRYHLPILLSG 126
Query: 70 --VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
V S+ + +++ + I + + T NA+ ++ + F H ++VT
Sbjct: 127 GQVFSDTGSEAEIARRVLRSLGVPSEMIYVETHSRTTGQNARYSAEILRREGFAHPILVT 186
Query: 127 HDYHMPRTFLELQRINSTVQFIPYP 151
+H+PR L ++ V PYP
Sbjct: 187 SAFHLPRAVLNFEK--EGVAVTPYP 209
>gi|295695151|ref|YP_003588389.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
gi|295410753|gb|ADG05245.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
Length = 188
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E +L +I +SG S+ ++ + + + + + +T
Sbjct: 49 RARLEAGLDLYRRGYAPRILVSGGQRRPGAPSEADVMADYLRVRGVPPRALIVEDLSSDT 108
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N +S + + + ++VT YH+PR + Y S D+ + +
Sbjct: 109 VENLLFSSRLMKIHGWRRAVVVTSAYHLPRALWLARLAGLDAS--GYAPASADV-LGTWM 165
Query: 164 FKIKILRVLLIEYLKI 179
+ ++ + Y K
Sbjct: 166 YALREIPAFWRSYQKW 181
>gi|148657753|ref|YP_001277958.1| hypothetical protein RoseRS_3653 [Roseiflexus sp. RS-1]
gi|148569863|gb|ABQ92008.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 191
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 13/192 (6%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKI 65
L + + G+ AIVVL G P+R + A +L +I
Sbjct: 2 LLTIAALTVSAGWWLPALGGLLALEGRPAHADAIVVLGGGFPLRDQHAIDLYREGWAREI 61
Query: 66 FISGVHHS-----VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ +G L + + + + +T + +E + A++ +
Sbjct: 62 WRTGDLPGGSVVLQKARRLALQQGVPETAF-----VPVATDSTWADGREIARMAQERHAQ 116
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLK 178
+LIVT H R + R + + + ++ + R++ E LK
Sbjct: 117 RLLIVTEWPHSRRAMCVINRHLAGTGVVAFYDGPRHPPYTPSNWWRDPEGRRIVSGEMLK 176
Query: 179 ILLLSIQLSLST 190
+ ++ ++
Sbjct: 177 TIYYLLRFGVTP 188
>gi|83720198|ref|YP_443090.1| hypothetical protein BTH_I2573 [Burkholderia thailandensis E264]
gi|83654023|gb|ABC38086.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 301
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 152 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 211
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 212 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 267
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 268 GWL-PRAVNLVNAE 280
>gi|91228201|ref|ZP_01262183.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
gi|91188190|gb|EAS74491.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
Length = 261
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIREISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 29/207 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPI-------------- 48
W L++ + G + + P AIV+L+
Sbjct: 42 WLFLWLASTPLVAGMLLVSLQTAPALPVVGELPPAQAIVILSAGQDLDAPEYGRAMPDND 101
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDILLQKI--PIRQDLAECCIDIGYKALNT 103
RI L +++ I ++G + + Q + + L +A+NT
Sbjct: 102 TLTRIAYGAHL-QHRTALPILVTGGAATPGSAAVAQVMLHTLESQLGARVRWTDERAMNT 160
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS- 162
NA+ A+A + +VTH +HMPR + V P S
Sbjct: 161 HENARNAAAILSAEGIERIYLVTHAWHMPRALRSFEAEGLDVVPAPTGFRDRPWRGPRSL 220
Query: 163 ---IFKIKILRVLLIEYLK---ILLLS 183
I+ E++ L
Sbjct: 221 IPRWSAIRDTYRAAHEWVGRLYYLAAY 247
>gi|304436974|ref|ZP_07396937.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369925|gb|EFM23587.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 252
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 26/147 (17%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIER-----AFELLENQIGEKIF--------------I 67
+ +P+ P I++L G I +L ++ +
Sbjct: 67 RTYPVPEAPQGDVIIMLGGGA--IADVQDVDGTGMLAQSPSSRLLAVYRLHLRTHLPILL 124
Query: 68 SG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SG V S+ + +++ + + I + ++L T NA+ + + F H ++
Sbjct: 125 SGGQVFSDTGSEAEIARRVLRSLGVPDDMIYVETRSLTTGQNARYTAEILRREGFVHPIL 184
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L ++ + PYP
Sbjct: 185 VTSAFHLPRAVLNFEK--QGITVTPYP 209
>gi|285017167|ref|YP_003374878.1| hypothetical protein XALc_0349 [Xanthomonas albilineans GPE PC73]
gi|283472385|emb|CBA14890.1| hypothetical protein XALc_0349 [Xanthomonas albilineans]
Length = 204
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 13/113 (11%)
Query: 36 SVSAIVVLTGEP----------IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQK 82
AI+VL RI A +L + +G ++ + ++
Sbjct: 46 PADAIIVLGAAAYDAKPSPVFEERIRHALDLYRRGYAPTLIFTGGFGNGARFAEAQVARR 105
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+RQ + + I + T N +A + V++V+ HM R
Sbjct: 106 YALRQGVPADAVLIETISRTTRQNLIQARQIMRAHGLRRVIVVSDPLHMARAL 158
>gi|157364443|ref|YP_001471210.1| hypothetical protein Tlet_1592 [Thermotoga lettingae TMO]
gi|157315047|gb|ABV34146.1| protein of unknown function DUF218 [Thermotoga lettingae TMO]
Length = 245
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 57/168 (33%), Gaps = 20/168 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTGEPIRIERA----- 53
F L +C FF G + + + + A+VVL G ++
Sbjct: 37 AIFMIFLALCFYFFSSGLGALTLVLPLERSYEISIPKKIDAVVVLGGGIVKTPNGYQPSQ 96
Query: 54 ---FELLENQIGEK-----IFISGVH----HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
LLE K + ISG + + ++++ + I I I A
Sbjct: 97 SSIVRLLEGVRIAKDFDSFLIISGGMLPLLNQPPEAVVMRDLAISLGFPAEAIIIEPDAK 156
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
T NA S + F +V++VT HM R + TV P
Sbjct: 157 TTFENAIFTSQICREKGFQNVVVVTSAIHMKRAIYSFSKARFTVHPCP 204
>gi|119502798|ref|ZP_01624883.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
gi|119461144|gb|EAW42234.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
Length = 236
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 54/177 (30%), Gaps = 24/177 (13%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPI----------------RIERAFELLENQIGEKIFISGV 70
+ P+ AIV+L G R+ A EL I ISG
Sbjct: 51 PAFSPEELPAAQAIVLLGGASNGAARFGRGADLNDAADRVMFAAELYFAGKAPIILISGG 110
Query: 71 HHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ LL + + + + ++ T NA A + H+L+VT
Sbjct: 111 APETMQPEAELLAQQLQALQIPRKQLLLETQSRTTFDNAVMAGEMLKNAGLQHILLVTSG 170
Query: 129 YHMPRTFLELQRINSTVQFIPY----PIISHDLEENSSIFKIKILR--VLLIEYLKI 179
HM R+ +R V P S ++ R + E++
Sbjct: 171 AHMRRSLALFERQGLQVTAAATDHQIPKFSDPYIPGWIPTYARLARSSRAIHEWVGY 227
>gi|51891778|ref|YP_074469.1| hypothetical protein STH640 [Symbiobacterium thermophilum IAM
14863]
gi|51855467|dbj|BAD39625.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 187
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 33 DHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQ 87
+ I+V G R ERA EL + + K+FI+G V + L+ +
Sbjct: 23 EPTPGDLILVF-GGKRLERAERAAELYKAGLAPKVFITGGDKRGIGVCEAERLRDHMVEL 81
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQ-RIN 142
+ IDI + LNT Q + E+ N +VL+V+ +HM R + I
Sbjct: 82 SVPAEAIDIECEGLNTIEQVQYSVKRIEETIGWKNIKNVLLVSAPHHMRRVKRTIANYIP 141
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ P D+ ++ +++ E K
Sbjct: 142 RETKITCCPDRRTDITRDNWWHTDDGQKLVYRELEK 177
>gi|188587339|ref|YP_001918884.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352026|gb|ACB86296.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 230
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 35/203 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGE-PIRIERAFELLENQIGE 63
+ + IF+ + +++ + I+VL G P RI EL ++ E
Sbjct: 27 AILILTIFWDNLLTAIGKFLVAEEPLER---DGSYILVLQGGIPDRIAHGVELHQDNYAE 83
Query: 64 KIFISGVHHSV---------------SKDILLQKIPIRQDLAECCIDI-GYKALNTEGNA 107
I + V S + ++ ++ + + I+I K +T+ A
Sbjct: 84 NILM--VESKSFTNYELMEQKQLDLPSSAEINKQAAMQMGIDDDQINIIPGKVDSTQQEA 141
Query: 108 QEASAWAEKNNFHH-----VLIVTHDYHMPRTFLEL-----QRINSTVQFIPYPIISHDL 157
+ + + N +H V++VT YH R L L + + + + P
Sbjct: 142 GKVAQYLSSN-YHSEEDLKVILVTSRYHSKRAKLILQTELKEHDLTNIDIVSSPSHYDPY 200
Query: 158 EENSSIFKIKILRVLLIEYLKIL 180
+ + R +EYLK++
Sbjct: 201 YPDEWWKNRRQARNTFMEYLKLI 223
>gi|329118151|ref|ZP_08246863.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465811|gb|EGF12084.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
Length = 222
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 16/190 (8%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGEP----------IRI 50
W G + + ++ F+ V + P A VVL RI
Sbjct: 18 LWRGFAISVALVLLFFVWCAWSVYRTGRDGLPQGYTGDAAVVLGAAAWDARPSPVFRERI 77
Query: 51 ERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L + K+ +G +S+ + ++ ++Q + I + K+ T N
Sbjct: 78 NHAVGLYRSGRVRKLVFTGGAVKKGYMSEGEVGRRYALKQGVPAEDILLENKSRTTYENL 137
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
A + ++IV+ H+ R + + Q P P + + F+++
Sbjct: 138 AYLRAPLREAGLRKIVIVSDPPHLARAAAVARDLGLDAQVSPTPTTRYAEGGSRFKFQLR 197
Query: 168 ILRVLLIEYL 177
+L YL
Sbjct: 198 ETVLLAGYYL 207
>gi|239832066|ref|ZP_04680395.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824333|gb|EEQ95901.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 279
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 56/179 (31%), Gaps = 28/179 (15%)
Query: 1 MRYFWYGLFVCLIFFI--MGFISFIRYVKQMHIPD--HPSVSAIVVLTG----------- 45
M L + +G + + PD V IVVL G
Sbjct: 54 MGLLALSLATLFLAAFTTLGAVLLAPLEDRFAKPDAMPQRVDGIVVLGGYMNGEINAGRK 113
Query: 46 ------EPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCI 94
RI A L K+ +SG S + +++ +
Sbjct: 114 GFELNSAADRIFEAMRLARLYPDAKVIVSGGEGAFFEKSAKEADSTRQMLADLGFSGERY 173
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
K+ NT NA + A+ L+VT YHMPR+ ++ V + +P+
Sbjct: 174 IFENKSRNTVENAVFSKELAQPKPGETWLLVTSAYHMPRSIGCFRKAGFDV--VAWPVD 230
>gi|159027601|emb|CAO86973.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 206
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 10/154 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ + + G ++Q + AI VL G R A +L + I++S
Sbjct: 22 LLAIPLILAGLGWLYLDLRQQWLKPE----AIFVLGGHADRERFAAKLAKEYPDLPIWVS 77
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ +K I + + Y A +T N + + V +VT D
Sbjct: 78 SGSPRRYVQKIFKKAGIPPERLH----LDYNARDTVTNFTSLADQLKAQGIDSVYLVTSD 133
Query: 129 YHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
HM R L E+ + + P + S E
Sbjct: 134 NHMRRARLVGEIIFGSRGIVIKPVTVPSQSPPEP 167
>gi|188582432|ref|YP_001925877.1| hypothetical protein Mpop_3190 [Methylobacterium populi BJ001]
gi|179345930|gb|ACB81342.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 278
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 41/180 (22%)
Query: 5 WYGLFVC----LIFFIMG-----FISFIRYVKQMHIPDHPSVSAIVVLTG--------EP 47
+ GL L +++G F +F D V+ IVVL G
Sbjct: 60 FLGLLAAGLSPLSAWVLGPLENRFPAFAD--------DERPVAGIVVLGGAVEADTSIGR 111
Query: 48 IRI---ERA------FELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECC 93
+I + +L ++ SG +VS+ ++ + +
Sbjct: 112 NQITVNDAGEREIALADLARRFPQARLVFSGGAGSLREDAVSEAEIVSRYADTLGVPRNR 171
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ + ++ NT NA ++ + L+VT +HMPR +R V YP+
Sbjct: 172 LILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRAVGCFRRAGFDVT--AYPVD 229
>gi|226311001|ref|YP_002770895.1| hypothetical protein BBR47_14140 [Brevibacillus brevis NBRC 100599]
gi|226093949|dbj|BAH42391.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G R+E+A L + K+ ++G ++++ + + + + + E I + K+
Sbjct: 68 GLRERLEQAAILYKEGYVSKLLVTGGLGEGKTITEAAVSRNYLVAKGIPEEDILLESKST 127
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+T N E+++ LI++HDYH+ R + + ++ + P+
Sbjct: 128 STYENLLYGQQVLEEHHIQDALIISHDYHLARAMV----MADSLGIVASPV 174
>gi|195953339|ref|YP_002121629.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
gi|195932951|gb|ACG57651.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 29 MHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSKD 77
+ +AIVVL G R+ L + +SG+
Sbjct: 68 SQPKGFLNANAIVVLGGGYYKNGNLSGETVKRLLAGVYLSYKTKIP-LILSGIDIKYLPK 126
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN---NFHHVLIVTHDYHMPRT 134
+ + + I K+ +T NA ++ + + + +++VT YHMPR
Sbjct: 127 N-TPIVKLINAIDIGNIYEDVKSKDTMQNAAQSYKVCTRYITPDCNSIILVTSAYHMPRA 185
Query: 135 FLELQRINSTVQFIPYPII-SHDLEENSSIFKIKILRV-----LLIEYLKILLLSI 184
+ R V IPYP+ DL N F + + + EYL IL I
Sbjct: 186 KMLFDRFFKNV--IPYPVDYKEDLRYNVRSFLPNMSDLENSTKAIREYLGILYYFI 239
>gi|89092000|ref|ZP_01164955.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
gi|89083735|gb|EAR62952.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
Length = 272
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 28/149 (18%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
V+ TG I R + Q Q LA I I +
Sbjct: 126 VIYTGGSGSIFR-------------------PGYRGADVAQNWLSEQGLAGRLI-IERDS 165
Query: 101 LNTEGNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPI---IS 154
NT NA + L++T +HMPR+ ++ + +PYP+ ++
Sbjct: 166 RNTYQNALYTRELINELGADSQGSWLLITSAFHMPRSVGVFRKA--GIDVVPYPVDYRVA 223
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ S + L + + E++ +L
Sbjct: 224 ENRWRPSLNRNMADLNLAVREWIGLLAYY 252
>gi|241760602|ref|ZP_04758694.1| periplasmic protein [Neisseria flavescens SK114]
gi|241318783|gb|EER55309.1| periplasmic protein [Neisseria flavescens SK114]
Length = 218
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLAGTWQIYRTGLQTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGSTSKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIIPIMHANGVGSIIVVSDPYHLARA 161
>gi|242279972|ref|YP_002992101.1| hypothetical protein Desal_2506 [Desulfovibrio salexigens DSM 2638]
gi|242122866|gb|ACS80562.1| protein of unknown function DUF218 [Desulfovibrio salexigens DSM
2638]
Length = 214
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 29/211 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G + F V + AIVVL G R A +L +I
Sbjct: 11 IGALTVAGILAAAVLFFFAPVLLQQEDELEKADAIVVLGGHYYRPLYAADLYNKGYAPRI 70
Query: 66 FISGVHHSVSKD---------------ILLQKIPIRQDLAECCID-IGYKALNTEGNAQE 109
S ++ + + + + +++D+ I+ G ++T A++
Sbjct: 71 LAS--KPVITPEIEAVRDLDIHFPYQWEVFRDVLLKKDVPAERIEFFGKANISTLDEAEK 128
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRT-FLELQRINSTVQFI----PYPIISHDLEENSSIF 164
+++VT H R + + + V+ I PY +
Sbjct: 129 LRDKLTPQ-IKSIILVTSPMHTRRAGIIFREILPPNVKIIVVGTPYEVTP-----ERWWT 182
Query: 165 KIKILRVLLIEYLKILLLSIQLSLSTQTASQ 195
+ +++E K L + + ++
Sbjct: 183 NFRAAPFVVLEVAKTLYYEFGGAFRSSESTT 213
>gi|92117952|ref|YP_577681.1| hypothetical protein Nham_2431 [Nitrobacter hamburgensis X14]
gi|91800846|gb|ABE63221.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 267
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 33 DHPSVSAIVVL-----------------TGEPIRIERAFELLENQIGEKIFISG-----V 70
D I++L G RI EL ++ SG +
Sbjct: 75 DGREPDGIIILGGAIEPELSAARKAVEVNGAAERIIGGLELARRFPRARVVYSGGSANLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
VS+ + ++ ++ I + ++ T+ NA+ L+VT YH
Sbjct: 135 ADPVSEAPIAGRLLETFGISPERIVLESESRTTDENARFTRKLVSPKPGERWLLVTSAYH 194
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL----------LIEYLKIL 180
MPR+ ++ V+ YP+ D I L + E+ +L
Sbjct: 195 MPRSIGVFRKAGLDVE--AYPV---DWRTRGWIDAWTPFDRLSAGLARADTAVHEWCGLL 249
Query: 181 LLSI 184
+
Sbjct: 250 AYRL 253
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L + G+ I +SG ++S+ +QK +++ L + I K+ NT
Sbjct: 65 RLDEGLRLYNDGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|254455840|ref|ZP_05069269.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082842|gb|EDZ60268.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 228
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTG-----------------EPIRIERAFELLENQ 60
++++ Q+ P + +IVVL+G RI L + +
Sbjct: 35 LVAYLESDYQLSKPSNIEPADSIVVLSGMIRTINSKDGLDYEFGEASDRIFAGINLFKEK 94
Query: 61 IGEKIFIS-GVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
K+ ++ G + + L++I I ++E I + NT+ A+ +
Sbjct: 95 KAPKLILTRGKLPWSVGIPEGEYLKEIAINNGISENNILLTENVENTDQEAKAIKKLLSE 154
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ VL+VT +HMPR + + +P+P+
Sbjct: 155 DK-SKVLLVTSAFHMPRAQKVFEAA--GINVVPFPVD 188
>gi|33865854|ref|NP_897413.1| hypothetical protein SYNW1320 [Synechococcus sp. WH 8102]
gi|33633024|emb|CAE07835.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 250
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 33/198 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--------FISFIRYVKQMHIPDHPSVSAIVVLTGEPI----- 48
R W + + +I + ++ + P AIVVL+G
Sbjct: 30 RRHWPVVAAMSLLWIFSTGVVSQLLWRWVEHPYQRRSVERAPLADAIVVLSGGRHPAPGP 89
Query: 49 ----------RIERAFELLENQIGEKIFISGV----HHSVSKD-ILLQKIPIRQDLAECC 93
R L ++ ++ + H + + L + + +
Sbjct: 90 AQISEWHDPDRFLAGVALFQSGRASRLLFTRGQNPFHPGLPPEGELYRAEAVDLGVPATS 149
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I + + NT A + VL+VT +HM R + +R + +PYP+
Sbjct: 150 IGLTDRVTNTAQEANAIRRLL-PQDQPRVLLVTSAFHMRRAQVLFER--QGLTVLPYPVD 206
Query: 154 --SHDLEENSSIFKIKIL 169
+
Sbjct: 207 FQARAAWAGFIWRDPLQW 224
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 38/199 (19%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP--------------- 47
+F+++ + + P + + AI++L G
Sbjct: 29 VALFWLLSTGWLTAPLLSLAQPQAETSAPTRFAPRTAIILLGGGTVYNRDKVLVPPREVM 88
Query: 48 IRIERAFELLENQIGEK----IFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKA 100
RI + E + +SG + ++ +R+ + I + ++
Sbjct: 89 ARIAVSAENYAACKRSATVCSVIVSGGNPQRHPATEADTYLPYLLREQVPRSDIVLENRS 148
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS +
Sbjct: 149 LTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFG----LEPQPLISGARRAH 204
Query: 161 ----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 205 LGLLPRYSNLANAELALHE 223
>gi|220935848|ref|YP_002514747.1| hypothetical protein Tgr7_2685 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997158|gb|ACL73760.1| conserved protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 77/223 (34%), Gaps = 44/223 (19%)
Query: 2 RYFWYGLFVCLIFF--IMGFISFIRYVKQ-------MHIPDHPSVSAIVVLTGEPI---- 48
R GL I + + F ++ + P + AIVVL G
Sbjct: 27 RRLGKGLVFAGIAWLYVAATPLFAGWLLAGLERGYPVAPPLPEAAGAIVVLAGGRHPDAP 86
Query: 49 -------------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
R+ L G + +SG V D + + D+ E +
Sbjct: 87 EYGGETVSPHSLERLRYGARL-HRDTGLPLLVSGG--RVRGDEPAAEADLLADVLEGELG 143
Query: 96 I-----GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ ++ NT NA ++ + H L+V+H HMPR QR + P+
Sbjct: 144 VAVRWRETESRNTCENALFSAHLLAEAGIEHALLVSHALHMPRAVWCFQRT--ELAVTPF 201
Query: 151 PIIS-HDLEENSSIF----KIKILRV---LLIEYLKILLLSIQ 185
P + DL + I + + L + L EYL ++ ++
Sbjct: 202 PTLPMGDLSRHRGITVVLPQPRALWLTGQALHEYLGLVWYRVK 244
>gi|269967671|ref|ZP_06181721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827758|gb|EEZ82042.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 261
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAISEISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|156740504|ref|YP_001430633.1| hypothetical protein Rcas_0485 [Roseiflexus castenholzii DSM 13941]
gi|156231832|gb|ABU56615.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 225
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 13/182 (7%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHS-- 73
G+ AIVVL G P+R + A +L +I+ +G
Sbjct: 46 AGWWLPALGSLLALPGRTARADAIVVLGGGFPLRDQHAIDLYREGWAREIWRTGEMPGGS 105
Query: 74 ---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
L + + I +T + +E + A + V+IVT H
Sbjct: 106 AVVQKARRLAIQQGVPAAAFVPLIT-----DSTWTDGREIARMARERKVERVIIVTDWSH 160
Query: 131 MPRTFLELQR--INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
R ++ S ++ + + R++ E LK ++ +
Sbjct: 161 SRRALCVIKHHLAGSGIEAFYDGPRNPPYTPFDWWHHPEGRRIVAGELLKTFYYLLRFGV 220
Query: 189 ST 190
+
Sbjct: 221 TP 222
>gi|254228980|ref|ZP_04922401.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262394709|ref|YP_003286563.1| membrane protein [Vibrio sp. Ex25]
gi|151938448|gb|EDN57285.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262338303|gb|ACY52098.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. Ex25]
Length = 261
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAISEISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|15893643|ref|NP_346992.1| hypothetical protein CA_C0352 [Clostridium acetobutylicum ATCC 824]
gi|15023198|gb|AAK78332.1|AE007549_12 Uncharacterized conserved membrane protein, SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507765|gb|ADZ19401.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 225
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ +A +L KI SG V++ + ++ + C+ K+ NT
Sbjct: 69 RERVIKAVKLFNKGYANKIICSGGGVYNKYIESDVMANFAKSLGIPNGCLIKEDKSRNTY 128
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N Q + E ++ ++VT +H+ R+ L +
Sbjct: 129 QNIQNSIKIMENKHWSSAIVVTSPWHLRRSNYFLSK 164
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 38/204 (18%)
Query: 6 YGLFVCLIFFIMGFISFIR--------YVKQMHIPDHPSVSAIVVLTGE--PIR------ 49
IF+++ + +AIV+L G R
Sbjct: 24 LLFCTIAIFWLLSAGWLTAPLLSLAQPQAQTSTPARFAPRTAIVLLGGGTVYNRDKVLVP 83
Query: 50 ---IERAFELLENQIG--EK------IFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
+ + ++ + +SG + + ++ +R+ + I
Sbjct: 84 PREVLARIAVSAKNYAACKRSATVCSVIVSGGNPQRHAATEADTYLPYLLREQVPRSDIV 143
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS
Sbjct: 144 LENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRAMLDFRHFG----LEPQPLISS 199
Query: 156 DLEEN----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 200 ARRARLGVLPRYSNLANAEIALHE 223
>gi|70732742|ref|YP_262505.1| hypothetical protein PFL_5437 [Pseudomonas fluorescens Pf-5]
gi|68347041|gb|AAY94647.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 253
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 47/217 (21%)
Query: 11 CLIFFIMGFI---------SFIRYVKQMHIPDHPS-------VSAIVVLTGEPIRIE--- 51
C + GF R ++++ IVVL R +
Sbjct: 38 CFALGLGGFWLMSLPVMVEWGARGLERLPPLPQSQWASLAEQADVIVVLGSGRERGDPAW 97
Query: 52 -----RAFELLENQIGEKI--------FISGV-HHSVSKDILLQKIPIRQDLAECCIDIG 97
L + ++ SG H+ + + L + + +
Sbjct: 98 GSDQPTGVGLERERYASRLAKASGLPVLTSGGLHYGTPPTE--AALMAQSLLDDFGVTVR 155
Query: 98 YK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI-- 152
++ + T NAQ ++ V++VT +HMPR+ + + +P P+
Sbjct: 156 WQEGRSRTTWENAQFSAEVLLPLGIKRVVVVTQAWHMPRSVWSFEHA--GFEVVPAPVGF 213
Query: 153 --ISHDLEENSSIFKIKILR---VLLIEYLKILLLSI 184
+ + + + K + LL E + L +
Sbjct: 214 LGVDNARPLGGWMPEFKSIWQSGQLLNEAVGQLGYRL 250
>gi|313677361|ref|YP_004055357.1| hypothetical protein Ftrac_3275 [Marivirga tractuosa DSM 4126]
gi|312944059|gb|ADR23249.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 239
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 34/215 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIR----YVKQMHIPDHPSVSAIVVLTG---------- 45
+Y F I F F+ F++ + + + V+LTG
Sbjct: 23 KYLAILGFALFIIFTNDFLANWFLKAWQTEAANLESIKNQKFTYGVLLTGMTNTLKEPKD 82
Query: 46 ------EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE-----CCI 94
RI +A L + I + ++ISG + + L + I L +
Sbjct: 83 RVYFNQNADRILQAIMLHQQGIIDTLYISGGGATALRKDLQEARVISNYLESIQFPMDKV 142
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ ++ NT +A+ ASA+ +L++T HMPR ++ + VQ P ++
Sbjct: 143 ILEDQSRNTVESARFASAYISSQ--TEILLITSASHMPRALGCFKKEDFRVQPYPTVFLT 200
Query: 155 HDLEENSSIFKIKI-----LRVLLIEYLKILLLSI 184
+D N S+F +L E++ I
Sbjct: 201 NDEMINPSMFLPSDDALLKWNILFKEWMGYSAYWI 235
>gi|255019747|ref|ZP_05291824.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
gi|254970815|gb|EET28300.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
Length = 267
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 32/174 (18%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSVSAIVVLTGEP------------ 47
G+ + L +G + ++ + P P V AIVVL G
Sbjct: 44 LLAAGVGLYLSATGVGARWLVLPLENRYPPLLHPQPGVGAIVVLGGGEVARPPGDGGDMA 103
Query: 48 -----IRIERAFELLENQIGEKIFISGVHHS-------VSKDILLQKIPIRQDLAECCID 95
+R+E A +L Q I SG + LL++ + I
Sbjct: 104 NARTLMRLEAAAKL-AKQSALPIVTSGGAPRFGAPPEATTMARLLRESFAVHNP----IW 158
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I ++ NT NA ++S + H V +VT HMPR +R +P
Sbjct: 159 IEGRSFNTAANAFDSSKLLAQKGIHRVYLVTSALHMPRAMAWFRRAGLDPVPVP 212
>gi|110597465|ref|ZP_01385752.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341009|gb|EAT59480.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 196
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 16/191 (8%)
Query: 4 FWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLE 58
+ L VC IF +GF+ ++ + I+VL G+ R+ + EL
Sbjct: 9 LFALLSVCGAASAIFLTLGFLV------SLYAGNPEKTDVIIVLGGDSGLRVRKGAELYN 62
Query: 59 NQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ + ++G+ + ++ I+ + + I + ++ T A A+ E
Sbjct: 63 SGYASHVILTGIDERFYRPAHPNWRERRMIKLGVPKKAIRVDTQSTTTWEEAVNAADTME 122
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
K + ++V+ HM R + S+ +FI K + ++
Sbjct: 123 KKGWKSAIVVSDPPHMLRLHQTWSKAFKGSSKRFILVSTKPEWWRPFVWWKNKKSYQFVI 182
Query: 174 IEYLKILLLSI 184
E K L ++
Sbjct: 183 NEIKKNLYYAV 193
>gi|218437457|ref|YP_002375786.1| hypothetical protein PCC7424_0452 [Cyanothece sp. PCC 7424]
gi|218170185|gb|ACK68918.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 260
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 74/219 (33%), Gaps = 48/219 (21%)
Query: 9 FVCLIFFIMGFISFIRYVKQMH-----IPDHPSVSAIVVLTG----------------EP 47
+I + + Q + P AIV+L G +
Sbjct: 43 LALIILLVASNGWISNQLVQSLEWQNIPSEIPQAEAIVLLGGATKPPAYPRPMVDMSEQG 102
Query: 48 IRIERAFELLENQIGEKIFISGV---------HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ A +L +Q I SG S LLQ + + I
Sbjct: 103 DRVLYAAKLYLDQKAPLIIASGGRIDWLSNEQSESADMANLLQLMGVPP----QVIIQEP 158
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHD 156
+LNT NA ++ VL+VT HMPR+ +++ V P + + +
Sbjct: 159 DSLNTYENATNVKKILQEKGIKQVLLVTSALHMPRSLFIFKKLGIDVIAAPTDFLVSRTE 218
Query: 157 LEENSSIFKIKILRVL------------LIEYLKILLLS 183
LE N+ + IL +L L EY+ +L+ S
Sbjct: 219 LEPNNLTLEGIILNILPSSENLDRTTKALKEYIGLLVYS 257
>gi|23012908|ref|ZP_00052888.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 23/162 (14%)
Query: 28 QMHIPDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGV 70
+ P V I+VL G R+ L + ++ SG
Sbjct: 70 RAPNPLPEKVDGIIVLGGAINPVVSEARGQVSVGGGVTRMTTLIPLAKRYPEARLVFSGG 129
Query: 71 -----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ + + + I + NT NA + + L++
Sbjct: 130 SGSPFNPELREADYAKIFYDDLGFDTDRIVFERDSRNTRENATLSKELMQPRPGETWLLI 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
T HMPR+ + + V IP + L+ +++
Sbjct: 190 TSAGHMPRSVGCFRAVGWPVVPIPVDYYTTGLD-KPWWTELR 230
>gi|119964395|ref|YP_948857.1| hypothetical protein AAur_3158 [Arthrobacter aurescens TC1]
gi|119951254|gb|ABM10165.1| putative uncharacterized DUF218 domain protein [Arthrobacter
aurescens TC1]
Length = 182
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 19/189 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQ 60
R + L C++ ++ I+ + AIVVL G R+ L +Q
Sbjct: 5 RKLAWALTACVLAGVLWLIAAFQLFHNPPRATPQKTDAIVVLGGMSNERLPVGLAL-RDQ 63
Query: 61 IGEKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+G K + +G+ + D + L +C + LNT G A A +
Sbjct: 64 LGIKDLVVVTTGLPANAGSDEFCEAHDGVTHL-DC---LRPDPLNTRGEALRLRDLAAER 119
Query: 118 NFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
+ V +VT DYH+ R +++ I + V + +L + + ++E
Sbjct: 120 GWTSVTVVTSDYHVQRAGTLMKQCIAADVHMVG---TEPELSPVAWV------WRFVVET 170
Query: 177 LKILLLSIQ 185
+L + ++
Sbjct: 171 GGLLDVWVR 179
>gi|300854922|ref|YP_003779906.1| hypothetical protein CLJU_c17410 [Clostridium ljungdahlii DSM
13528]
gi|300435037|gb|ADK14804.1| uncharacterized conserved membrane protein [Clostridium ljungdahlii
DSM 13528]
Length = 204
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 23/159 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSV-------SAIVVL------TGEPI 48
+ L + ++ FI + V ++ P I++L G+P
Sbjct: 6 FIILLKYMAISVLFFIIIVLVVINLYPLLFYKSPETKLKRDRYDVIIILGFPALQDGKPS 65
Query: 49 -----RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ +A EL I SG V++ + ++ + C+ K+
Sbjct: 66 PIMRERVIKAVELFNKGYANNIICSGGGVYNKYIEADIMANFAESLGIPNSCLIREDKSR 125
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
NT N Q + E + +IVT +H+ R+ L +
Sbjct: 126 NTYQNIQNSIKIMEDKKWSSAMIVTSPWHLRRSNYFLSK 164
>gi|163852418|ref|YP_001640461.1| hypothetical protein Mext_3001 [Methylobacterium extorquens PA1]
gi|163664023|gb|ABY31390.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 278
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 33 DHPSVSAIVVLTG--------EPIRI------ERAFEL--LENQIGE-KIFISGV----- 70
D V+ IVVL G +I ERA L L + + ++ SG
Sbjct: 89 DGTPVTGIVVLGGTVEADTSIGRDQITVNEAGERAIALADLARRYPQARLVFSGGAGSTR 148
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+VS+ ++ + + + + ++ NT NA ++ + L+VT +H
Sbjct: 149 EDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWH 208
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ ++ V YP+
Sbjct: 209 MPRSMGCFRKAGFDVT--AYPVD 229
>gi|167620257|ref|ZP_02388888.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
Length = 240
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 91 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 206
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 207 GWL-PRAVNLVNAE 219
>gi|167582098|ref|ZP_02374972.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|257139318|ref|ZP_05587580.1| hypothetical protein BthaA_08969 [Burkholderia thailandensis E264]
Length = 240
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 91 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 206
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 207 GWL-PRAVNLVNAE 219
>gi|330816685|ref|YP_004360390.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
gi|327369078|gb|AEA60434.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
Length = 238
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 29/175 (16%)
Query: 26 VKQMHIPDHPSVSAIVVLTGE--------------PIRIERAFELLENQIGEK----IFI 67
V+ + P +AIV+L G RI RA EL I +
Sbjct: 52 VEPVEAPTMRGHTAIVLLGGGIERRRGELVPPHDALSRIVRAAELHSVCQAIASQCDIVV 111
Query: 68 SGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +S+ L + +AE + + ++ T NA+ + ++ ++
Sbjct: 112 TGGDPHHHGISEAQLYAPLLREHGVAERDLILETRSRTTYENAKYTAPILLAQHYDATIL 171
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE----ENSSIFKIKILRVLLIE 175
VT Y M R L+ R P P+ ++ L L E
Sbjct: 172 VTSSYQMRRALLDFARF----DIEPQPVYANQLRPILGWRPVWHNFVAASRALHE 222
>gi|226334849|ref|YP_002784521.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226246069|dbj|BAH56169.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 190
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 13/158 (8%)
Query: 1 MRYFWYGLFVCLIFFI----MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFE 55
MR + V I GFI + + + D SV AIVVL GE R E AF+
Sbjct: 1 MRKIVAAMIVATILICCTAGAGFIVY----NRSAVDDIRSVDAIVVLGGERDGREEFAFD 56
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + + +S + + + CI T G A A
Sbjct: 57 LARQGLSRNVVLSDPYGPYGTKLAARCETRDPRFTVRCI--PPNPSTTLGEAVFTRNLAT 114
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYP 151
N ++ +++V+ YH+PR R V +P P
Sbjct: 115 ANGWNSLMVVSWRYHLPRARYIFSRCLDGRDVLMVPVP 152
>gi|307267183|ref|ZP_07548690.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917799|gb|EFN48066.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 191
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLT----GE------PIRI 50
++ W + ++F I+G I + + + I+VL G+ R+
Sbjct: 5 LKIVW---LLLVLFIIIGIILEWQIISFAYNEKPKKSDVIIVLGCAVYGDIPSPFFKARL 61
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E A L G I +SG ++S+ + +++ + E I I K+ +T N
Sbjct: 62 EEALRLYNEGYGRYIIVSGGKGPGENISEAEAGKGYLLKKGIPEKAILIDDKSFSTYENL 121
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
Q + +K + +I+++ +H+ R + +R+ F
Sbjct: 122 QFSKEIMDKKSLKRAVIISNKFHLKRASVIAKRVGIEASF 161
>gi|327402034|ref|YP_004342872.1| hypothetical protein Fluta_0024 [Fluviicola taffensis DSM 16823]
gi|327317542|gb|AEA42034.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 255
Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 67/220 (30%), Gaps = 53/220 (24%)
Query: 6 YGLFVCLIFFIMGFIS--FIRYVK--QMHIPDHPSVSAIVVLTG---------------E 46
Y +FF FI F R + I +VLTG
Sbjct: 40 YAAIFIALFFSNTFIYKEFCRQWEIFGTPISQVKHYDVAIVLTGMAEYNNDLQVLSARRG 99
Query: 47 PIRIERAFELLENQIGEKIFIS---------GVHHSVSKDILLQKIPIRQDLAECCIDIG 97
RI + L + ++I IS G+H + +L K I + I
Sbjct: 100 IDRIWQTISLYKAGKIDRILISGDHGYLIDKGLHEATQLKEILVKWGIPEH----VIITE 155
Query: 98 YKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRI-------------N 142
K+ NT NA E+ + N + +L+VT HM R ++
Sbjct: 156 TKSKNTYENAVESQKIVNRLFPNSNAILLVTSGRHMRRARACFNKLGLKCDTYSTDLFTG 215
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
F +I D+ S LL E + +
Sbjct: 216 PNRSFTFDELIIPDVSTMSDWHS------LLKEMIGYIAY 249
>gi|21673972|ref|NP_662037.1| hypothetical protein CT1146 [Chlorobium tepidum TLS]
gi|21647116|gb|AAM72379.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 196
Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 60/185 (32%), Gaps = 6/185 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
F+ + ++ MH IV+L G+ R+ + +L + +
Sbjct: 9 LLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKH 68
Query: 65 IFISGVHHSVSKDIL---LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ ++G+ + ++ + + + I + + + A+ S +KN +
Sbjct: 69 VLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKS 128
Query: 122 VLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
L+V+ HM R + + +F R ++ E K
Sbjct: 129 ALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRFVINELKKN 188
Query: 180 LLLSI 184
+ +
Sbjct: 189 IYYLV 193
>gi|240139755|ref|YP_002964232.1| hypothetical protein MexAM1_META1p3209 [Methylobacterium extorquens
AM1]
gi|240009729|gb|ACS40955.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens AM1]
Length = 265
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 29/179 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHI---PDHPSVSAIVVLTG--------EPI 48
R FV L+F + + ++ D V+ IVVL G
Sbjct: 40 RVLTVASFVGLLFGGLSPLSAWTLAPLENRFPNFIDDGTPVTGIVVLGGTVEADTSIGRD 99
Query: 49 RI------ERAF---ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCI 94
+I ERA +L ++ SG +VS+ ++ + + +
Sbjct: 100 QITVNEAGERAIALADLARRYPQARLVFSGGAGSTREDAVSEAEIVSRYADTLGVPRNRL 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ ++ NT NA ++ + L+VT +HMPR+ ++ V YP+
Sbjct: 160 ILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGFDVT--AYPVD 216
>gi|116249878|ref|YP_765716.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254526|emb|CAK05600.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C+I GF + + + + G R A L + +I +SG
Sbjct: 80 CMIVLGGGFENEVNTARHG-----------IEFNGGADRFIEALRLAQKFPQSRILVSGG 128
Query: 71 HHSVS------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
S+S + P+ + I+ ++ T NA + + L+
Sbjct: 129 DGSISGIYEGDAAASERFFPLFGVGRDRLIE-ERQSRTTFENAVNTKEFLASQGLSNCLL 187
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
+T +HMPR+ +++ + +P+P
Sbjct: 188 ITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|167836831|ref|ZP_02463714.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 57/157 (36%), Gaps = 19/157 (12%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDI 78
+++ P A+ RI++ EL + ++ + +SG +++
Sbjct: 75 IRRRDGAAVPPRDAL-------ARIDKTAELYSACQRTAKRCTVVVSGGDPQMRGITEAD 127
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +A + + T NA+ ++ +++VT Y M R L+
Sbjct: 128 TYAPYLLARGVAHADLIRERSSHTTYENARFTVPILRAQHYDDLILVTSSYQMKRALLDF 187
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+R +P P+ ++ + + ++ E
Sbjct: 188 ERFG----IVPQPVYANRRDAQLGWL-PRAANLVNAE 219
>gi|237812033|ref|YP_002896484.1| hypothetical protein GBP346_A1775 [Burkholderia pseudomallei
MSHR346]
gi|237506357|gb|ACQ98675.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARP 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|167902941|ref|ZP_02490146.1| hypothetical protein BpseN_11835 [Burkholderia pseudomallei NCTC
13177]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRSIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARP 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|241207055|ref|YP_002978151.1| hypothetical protein Rleg_4373 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860945|gb|ACS58612.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 28/151 (18%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C+I GF + + + + G R A L + +I +SG
Sbjct: 80 CMIVLGGGFENEVNTARHG-----------IEFNGGADRFIEALRLAQKFPQSRILVSGG 128
Query: 71 H---------HSVSKDILLQKIPI-RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ + + + R L E ++ T NA +
Sbjct: 129 DGSMSGIYEGDAAASERFFPLFGVGRDRLIE-----ERQSRTTFENAVNTKEFLASQGLS 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ L++T +HMPR+ +++ + +P+P
Sbjct: 184 NCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|218531176|ref|YP_002421992.1| hypothetical protein Mchl_3226 [Methylobacterium chloromethanicum
CM4]
gi|218523479|gb|ACK84064.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 265
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHI---PDHPSVSAIVVLTG--------EPI 48
R FV L+ + + ++ D V+ IVVL G
Sbjct: 40 RVLTVAGFVGLLVAGLSPLSAWTLAPLENRFPSFTDDGTPVTGIVVLGGTVEADTSIGRD 99
Query: 49 RI------ERAF---ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCI 94
+I ERA +L ++ SG +VS+ ++ + + +
Sbjct: 100 QITVNEAGERAIALADLARRYPQARLVFSGGSGSTREDAVSEAEIVSRYADTLGVPRNRL 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ ++ NT NA ++ + L+VT +HMPR+ ++ V YP+
Sbjct: 160 ILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGFDVT--AYPVD 216
>gi|307150072|ref|YP_003885456.1| hypothetical protein Cyan7822_0130 [Cyanothece sp. PCC 7822]
gi|306980300|gb|ADN12181.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 278
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 68/242 (28%)
Query: 9 FVCLIFFIMGFISFIRYVKQMH-----IPDHPSVSAIVVLTG----------------EP 47
+I + G + Q + P+ AI+VL G +
Sbjct: 43 LALIIILVAGNEWVSNGLIQSLEWQNIPQNIPNAEAIIVLGGATKSASFPRPMVDLNEQG 102
Query: 48 IRIERAFELLENQIGEKIF----------------ISGVHHSVSKDI---------LLQK 82
R+ A +L ++ I +SGV +S LL
Sbjct: 103 DRVVYAAKLYQDHKAPLIIASGGRIKWGGQQVTDKLSGVGNSFRTQQQPESADIATLLTL 162
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + I +LNT N + VL+VT HMPR+ L ++
Sbjct: 163 MGVPPSA----ILQDSTSLNTYENVVNVKKILNEKGIKRVLLVTSALHMPRSLLIFKK-- 216
Query: 143 STVQFIPYP----IISHDLEENSSIFKIKILRVL------------LIEYLKILLLSIQL 186
+ IP P + +LE++ + +L ++ L EY+ +++ ++
Sbjct: 217 QGIDVIPAPTDFLVSQPELEQSDLSVETIMLNLIPDAGRLEGTTKALKEYIGMVIYRLKG 276
Query: 187 SL 188
L
Sbjct: 277 WL 278
>gi|190889771|ref|YP_001976313.1| hypothetical protein RHECIAT_CH0000139 [Rhizobium etli CIAT 652]
gi|190695050|gb|ACE89135.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 262
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 17/117 (14%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPI-RQDLAECCI 94
G R A L + +I +SG + + + I R L E
Sbjct: 103 GGADRFVEALRLAQKFPQSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRDRLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ETQSRTTFENAVNTRDFLAGQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPI-RIERAFELLENQ 60
+ G+ + + ++G +S+ + + I + P I+V G+ R RA ELL
Sbjct: 7 IIFIGVVIVFMCLVIG-VSYPIIINNLIIDEGPVQSDVIIVPEGQEYVRAYRAAELLHEG 65
Query: 61 IGE--KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+I +S + + ++ + Q+ I KA +T NA E++
Sbjct: 66 FSTSGQIIVSPIDKAT--VQGYKEFWVSQEQ----IIPETKATSTYENAVITLRMMEEHG 119
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQF 147
F +IV+ DYHM RT L +RINS F
Sbjct: 120 FDSAIIVSSDYHMRRTKLIYERINSDYDF 148
>gi|219872211|ref|YP_002476586.1| hypothetical protein HAPS_2205 [Haemophilus parasuis SH0165]
gi|219692415|gb|ACL33638.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 201
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ I D+ S AIV+L+G R+ A L+ + G + I+G
Sbjct: 22 DNLSIEDYKSAQAIVLLSGGLRDSKELFGKLAISEIALERVRYA-AFLQKETGLPLLITG 80
Query: 70 VHH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+V K L Q I + KA T NA+ + EK + ++
Sbjct: 81 SSPKGTSEAAVMKKELEQFFHIPTQW------LEEKAKTTAENAKFSKPILEKEGINKIV 134
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + +R
Sbjct: 135 LVTNQWHMQRARMLFER 151
>gi|330811913|ref|YP_004356375.1| hypothetical protein PSEBR_a4949 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380021|gb|AEA71371.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 253
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 36/177 (20%)
Query: 10 VCLIFFIMGF--------ISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIE-- 51
+C + GF + + + P AIVVL R +
Sbjct: 37 LCFAVGLGGFWLMSLPVVVQWSAKALEREPPLLRSEWATLAQRADAIVVLGSGRERGDLA 96
Query: 52 ------RAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCIDIGY------ 98
L + ++ +SG+ + + P L + +
Sbjct: 97 WGADQPTGVGLERQRYAARLAKVSGLPVLTTGGLHYGTPPSEAKLMADSMLDDFGVNVRW 156
Query: 99 ---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ T NAQ ++ V+++T +HMPR+ +R + +P P+
Sbjct: 157 QEGRSRTTWENAQMSAEILLPEGIKRVVVITQAWHMPRSVWSFERA--GFEVVPAPV 211
>gi|56476276|ref|YP_157865.1| hypothetical protein ebA1532 [Aromatoleum aromaticum EbN1]
gi|56312319|emb|CAI06964.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 37/182 (20%)
Query: 12 LIFFIMGFISFIR----YVKQMHIPDHPSVSAIVVL-----------------TGEPIRI 50
+ F ++GF +F R V + +P AIVVL G R+
Sbjct: 50 IAFSLVGFDNFARSPWPQVPERIALPYPRAEAIVVLGAGRYLQAPEYDGDTAAAGSLERV 109
Query: 51 ERAFELLENQIGEKIFISGVHH----SVSKDILLQ-----KIPIRQDLAECCIDIGYKAL 101
A +L G I +SG + S+ ++Q + + E +
Sbjct: 110 RYAAKLYRE-TGLPILVSGGRPGDIGTRSEAEIMQDILEQEFHVPVRWVE------PDSE 162
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+T+ NA+ ++A + +VTH +H+ R + + V + + +
Sbjct: 163 DTQQNAERSAALLRAEGVTCIYLVTHGFHIDRAAAQFHKHGLEVVPMATGFVRPQPDTVL 222
Query: 162 SI 163
S
Sbjct: 223 SW 224
>gi|219855730|ref|YP_002472852.1| hypothetical protein CKR_2387 [Clostridium kluyveri NBRC 12016]
gi|219569454|dbj|BAH07438.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 199
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RIERAF 54
+ L+ ++ F++ I+ I+ + I+VL G R+ +
Sbjct: 10 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVL-GCRVYGSTPSPFLIWRLNKGL 68
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
EL + G+ I +SG ++S+ ++ + + + + + K+++T N +
Sbjct: 69 ELYDKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSK 128
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
E+ +IV++ YH+ R L
Sbjct: 129 RVMEEKGLKTAVIVSNKYHLKRASL 153
>gi|153955310|ref|YP_001396075.1| hypothetical protein CKL_2692 [Clostridium kluyveri DSM 555]
gi|146348168|gb|EDK34704.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 196
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RIERAF 54
+ L+ ++ F++ I+ I+ + I+VL G R+ +
Sbjct: 7 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVL-GCRVYGSTPSPFLIWRLNKGL 65
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
EL + G+ I +SG ++S+ ++ + + + + + K+++T N +
Sbjct: 66 ELYDKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSK 125
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
E+ +IV++ YH+ R L
Sbjct: 126 RVMEEKGLKTAVIVSNKYHLKRASL 150
>gi|300690675|ref|YP_003751670.1| hypothetical protein RPSI07_1014 [Ralstonia solanacearum PSI07]
gi|299077735|emb|CBJ50373.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum PSI07]
Length = 190
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPADRIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ +T GNA+ ++VT YH R +++ V + +
Sbjct: 105 ------ESGSTMGNAEMTHRALTGQPVRSAVLVTSWYHTGRALEVFRQVWPEVTWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EY+K +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYIKRAWYAVR 189
>gi|238927939|ref|ZP_04659699.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
gi|238884272|gb|EEQ47910.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
Length = 253
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 26/147 (17%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIER-----AFELLENQIGEKIF--------------I 67
+ +P+ P I++L G I +L ++ +
Sbjct: 68 RTYPVPEVPQGDVIIMLGGGA--IADVQDVDGMGMLAQSPSSRLLAAYRLHLRTHLPILL 125
Query: 68 SG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SG V S+ + +++ + + I + ++L T NA + + H ++
Sbjct: 126 SGGQVFSDTGSEAEIARRVLRSLGVPDEMIRVETRSLTTGQNAHYTAEILRREGLMHPIL 185
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L ++ + PYP
Sbjct: 186 VTSAFHLPRAVLNFEK--QGITVTPYP 210
>gi|254562167|ref|YP_003069262.1| hypothetical protein METDI3773 [Methylobacterium extorquens DM4]
gi|254269445|emb|CAX25411.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens DM4]
Length = 265
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)
Query: 33 DHPSVSAIVVLTG--------EPIRI------ERAF---ELLENQIGEKIFISGV----- 70
D V+ IVVL G +I ERA +L ++ SG
Sbjct: 76 DGTPVTGIVVLGGTVEADTSIGRDQITVNEAGERAIALADLARRYPQARLVFSGGAGSTR 135
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+VS+ ++ + + + + ++ NT NA ++ + L+VT +H
Sbjct: 136 EDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWH 195
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ ++ V YP+
Sbjct: 196 MPRSMGCFRKAGFDVT--AYPVD 216
>gi|182678647|ref|YP_001832793.1| hypothetical protein Bind_1673 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634530|gb|ACB95304.1| protein of unknown function DUF218 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 284
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 39/218 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP----SVSAIVVLTGE----------- 46
R + + + F +F+ + P+ + I+VL G
Sbjct: 40 RLQAIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPAGIIVLGGGMDSRESKARGV 99
Query: 47 ------PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQDLAE 91
R+ EL K+ +G S+ L Q + + +
Sbjct: 100 PILNTAGSRMTAGVELSRLFPQAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQM- 158
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI--P 149
+ NT NA + L+VT HMPR+ +++ V
Sbjct: 159 ---VFEGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNAN 215
Query: 150 YPIISHDLEENSSIFKIKILRVL---LIEYLKILLLSI 184
Y I + + + LR+L L E++ +L +
Sbjct: 216 YMTIGDARDWSVTTLAHDRLRMLSFGLREWIGLLAYRL 253
>gi|34558162|ref|NP_907977.1| hypothetical protein WS1867 [Wolinella succinogenes DSM 1740]
gi|34483881|emb|CAE10877.1| hypothetical protein WS1867 [Wolinella succinogenes]
Length = 214
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 24/172 (13%)
Query: 33 DHPSVSAIVVLTGE--PIRIERAFELLENQIGEKIFISGV-------------HHSVSKD 77
AI+VL G R+ A LL+ + ++ V H S
Sbjct: 36 AQRGADAILVL-GGNKSSRLPHAISLLKAGYAPLLLVTEVKRYSNQTFDGLLRHESDEVV 94
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+L + + L + A +T A + A+A+ +N ++IVT +H R
Sbjct: 95 HILSSLHLPHHLIP---SLKGGATSTYDEAYDFFAYAKDSNIRSIIIVTDAFHTRRALGA 151
Query: 138 LQRINS-----TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
++ +Q P + E L+ ++E +K L I
Sbjct: 152 FLKVQRRLQEEKIQIQISPAPNTHFNEKDWYLTEAGLQAYILEGIKTFLYLI 203
>gi|317968461|ref|ZP_07969851.1| hypothetical protein SCB02_02886 [Synechococcus sp. CB0205]
Length = 266
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 24/149 (16%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P+ A+VVL G R+ L+ + +
Sbjct: 65 ERAAALTPKTIPNADAVVVLGGGLKPALPPRRGVEVSEGGDRLLTGVRLMSQKKAGTLVT 124
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + ++ + + + I + T A++ A++ +
Sbjct: 125 SGAQISFTAADPAPAEAFSAKALAEELGVPSQRIVPNPLSKTTAEEARDIGQLAKQRGWS 184
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIP 149
VL+VT +HMPR+ QR + +Q IP
Sbjct: 185 QVLLVTSAFHMPRSLATFQRRS-GLQVIP 212
>gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021]
gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 335
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 26/175 (14%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 113 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 172
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDI 96
R L + +I +SG S+S + + +
Sbjct: 173 ELNQAAERFVETLRLAQAYPQARILVSGGDGSLSGIYEGDAHASENFFGTFGIGSDRLIR 232
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 233 EGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 285
>gi|90421278|ref|ZP_01229163.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334463|gb|EAS48266.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 211
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 24/167 (14%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFI 67
V + + D + + I+VL G R+ EL + K+
Sbjct: 44 SVIRAVVLDRRARNGIIVLGGAFDTRVARTRGMNELNDAADRVTAGMELAQRYPKAKLLF 103
Query: 68 SGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
SG + + + + LA + + +A +T NA A A+
Sbjct: 104 SGGVAALLEEDIPETEAAEALYRGLGLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVW 163
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
++VT HMPR + +PYP+ +
Sbjct: 164 VLVTSASHMPRAVGCFRVA--GFDIVPYPVDYRTPSGPALWRPSSTT 208
>gi|21673458|ref|NP_661523.1| hypothetical protein CT0624 [Chlorobium tepidum TLS]
gi|21646562|gb|AAM71865.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 257
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 22/160 (13%)
Query: 28 QMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV-- 70
++ + AIVVL+G R E +L + + +G
Sbjct: 63 RVPVEQVRKADAIVVLSGMLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGGQM 122
Query: 71 --HHS-VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW--AEKNNFHHVLIV 125
V + LL + + I + NT G A + +++V
Sbjct: 123 PWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRIILV 182
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
T +HM R + V+ P + DL+ +++
Sbjct: 183 TSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLD 222
>gi|33240920|ref|NP_875862.1| hypothetical protein Pro1471 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238449|gb|AAQ00515.1| Uncharacterized conserved protein with signal peptide
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 241
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 28/189 (14%)
Query: 6 YGLFVCLIFFIMGFIS-----FIRY-VKQMHIPDHPSVSAIVVLTGE------------- 46
+F+ L F +G +S F+ + +++ P+ AIVVL+
Sbjct: 24 LSIFIFLWTFSIGLVSQMLWKFVEHPWQRIDESHAPTADAIVVLSSGGRSLAPGISNIIE 83
Query: 47 ---PIRIERAFELLENQIGEKIFISGVHHSVSKD-----ILLQKIPIRQDLAECCIDIGY 98
P R +L + + K+F +G K L ++ I + + I
Sbjct: 84 WNDPDRFLAGVKLFKEKKAPKLFFTGGASPYRKALKTEGDLYKEEAISLGIPKKAISTTG 143
Query: 99 KALNTEGNAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
+ NT A + + +L+VT +HM R + +R VQ P +
Sbjct: 144 RVFNTAEEAFQIRRNIKDKGSPSKILLVTSAFHMQRAKRQFERQGFIVQPFPVDFKTERK 203
Query: 158 EENSSIFKI 166
+
Sbjct: 204 FRKTYWKNP 212
>gi|315652448|ref|ZP_07905435.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485286|gb|EFU75681.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 365
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 25/198 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
+ Y + F+M + +HI + + I+VL RI
Sbjct: 144 LVYKMLSFIFIYLLFLMAMYCISAILNLIHIGRNKKLDYIIVLGAGIKGKRVTPLLAGRI 203
Query: 51 ERAFELLENQIGEKIFISGV-HHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ ELL+ K+ +SG + ++ +++ I I K+ NT+ N
Sbjct: 204 DKGIELLKYNPNAKLILSGGMGPGEDIPEGVAMADYAKQKGVSDEKIIIEDKSKNTKENL 263
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + N + IVT YH+ R + +++ + I Y +
Sbjct: 264 LFSYKLIDNKN-SKIAIVTTSYHVFRALVFAKKL--NIPCIGYGSKT---------KWYF 311
Query: 168 ILRVLLIEYLKILLLSIQ 185
L L+ EY+ L +S +
Sbjct: 312 TLNALIREYIGYLSISYR 329
>gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 262
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 26/175 (14%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 40 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDI 96
R L + +I +SG S+S + + +
Sbjct: 100 ELNQAAERFVETLRLAQAYPQARILVSGGDGSLSGIYEGDAHASENFFGTFGIGSDRLIR 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 160 EGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 212
>gi|218509953|ref|ZP_03507831.1| hypothetical protein RetlB5_22095 [Rhizobium etli Brasil 5]
Length = 262
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPI-RQDLAECCI 94
G R A L + +I +SG + + + I R+ L E
Sbjct: 103 GGADRFVEALRLAQKFPDSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRERLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ETQSRTTFENAVNTREFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|194336436|ref|YP_002018230.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308913|gb|ACF43613.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 196
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 9/193 (4%)
Query: 1 MRYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFEL 56
MR F F+ L +S + + H D I+VL G+ R+ + EL
Sbjct: 1 MRLFVKITLIFFLSLTTAAALLLSCLGILVSQHAADPEKCDVIIVLGGDNGLRVRKGAEL 60
Query: 57 LENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ ++G+ S ++ I + + I I K+ T A+ S
Sbjct: 61 YNAGYASHVILTGIDERFYRPSHPNWRERRMIALGVPKKAIKIDTKSKTTWEEAENTSNT 120
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRV 171
EK + +IV+ HM R R S+ FI + + +
Sbjct: 121 MEKKGWKSAIIVSDPPHMLRLHQTWNRAFKGSSKTFILVSTTPSWWDRVLWWKNRQSYQF 180
Query: 172 LLIEYLKILLLSI 184
++ E K L +
Sbjct: 181 VISEIKKNLFYAA 193
>gi|261252465|ref|ZP_05945038.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
gi|260935856|gb|EEX91845.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
Length = 267
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG VS ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRVMRIYPGSKLILSGYAGGSEVSNARMMAKVALSLGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ +++VT HM R E PYP ++ L +N+
Sbjct: 165 WEEARQAAAFVTTKK---LVVVTSASHMKRALNEFHSAGMD----PYPAPTNYLAQNN 215
>gi|325917198|ref|ZP_08179425.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
gi|325536588|gb|EGD08357.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
Length = 183
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + +I ++ Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAAWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N +A A
Sbjct: 57 GQGYAPRLLFTGGFGNGARFAESQVARRYALRHGVPPEAIVIETSSRTTRQNLLQARALM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGMHRAIIVSDPLHMARAL 137
>gi|166368105|ref|YP_001660378.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
gi|166090478|dbj|BAG05186.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
Length = 207
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 12/156 (7%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + LI I+G++ ++Q AI VL G R A +L + I+
Sbjct: 26 LLAIPLILAILGWL--YHDLRQ----QWLKPEAIFVLGGHADRERFAAKLAKEYPDLPIW 79
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+S + +K I + + Y A +T N + + V +VT
Sbjct: 80 VSSGSPRRYVRKIFKKAGIPPERLH----LDYNARDTVTNFTSLADQLKAQGIDSVYLVT 135
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
D HM R L E+ + + P + S E
Sbjct: 136 SDNHMRRARLVGEIVFGSRGIMIKPVTVPSQSPPEP 171
>gi|237746467|ref|ZP_04576947.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377818|gb|EEO27909.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 203
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 21/149 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IR 49
+R F+ + + F + + A ++L G R
Sbjct: 5 LRILVIAAFLFVAYIFCSIALFS------TVDQKKTADAAIIL-GAAAWYKRPSPVFEER 57
Query: 50 IERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I L EN K+ ++G S+ + ++ + + E I I + T N
Sbjct: 58 IRHGLWLYENGYVRKLILTGGKSKNAPYSEAFVARRYALSHAIPENDILIEEASQTTREN 117
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A A + N LIV+ HM R
Sbjct: 118 LLNAKAIMQANGLSTALIVSDPIHMKRAM 146
>gi|186685641|ref|YP_001868837.1| hypothetical protein Npun_R5589 [Nostoc punctiforme PCC 73102]
gi|186468093|gb|ACC83894.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 176
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 36 SVSAIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
A+VVL G R+ER E + I+I+G S Q++ + +
Sbjct: 22 QPQAVVVLGGSTRRLEREKFTAEFVRQHPNIPIWITGG----SPPRFTQRVFTKAGVDPK 77
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPY 150
+ + Y+A++T N + V ++T D+HM R E+ + + P
Sbjct: 78 RLHLDYEAVDTVTNFTTLVDDLQARGIKSVYLITSDFHMRRACVIGEIILGSRGIYLKPV 137
Query: 151 PIISHDLEEN 160
P+ S E+
Sbjct: 138 PVPSEKPPES 147
>gi|170749150|ref|YP_001755410.1| hypothetical protein Mrad2831_2743 [Methylobacterium radiotolerans
JCM 2831]
gi|170655672|gb|ACB24727.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 281
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 43/223 (19%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFI----------RYVKQMHIPDHPSVSAIVVLTGEPIRI 50
R+ GL + L+ F++G + D P+ + I+VL G I
Sbjct: 34 RWRRSGLGLALLGSFLLGAAGLAPLSDVALIPLEQRFPAYPDDGPAPTGIIVLGGG---I 90
Query: 51 ERAF--------------------ELLENQIGEKIFISG----VHHSVSKDILLQKIPIR 86
E +L ++ SG + +++ ++ +
Sbjct: 91 EAGLSEARRQIVVNDAGERPIYLGDLARRYPAARLVFSGGSGFIAGGMAEADIVSRQADV 150
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + + ++ NT NA ++A + L+VT +HMPR ++ V
Sbjct: 151 IGVPRTRLILENRSRNTHENAAFSAALVKPKPGERWLLVTSAWHMPRAVGCFRQAGFAVD 210
Query: 147 FIPYPIISHDLEENSSIFKIKILRVL-----LIEYLKILLLSI 184
P + + + +L + E++ ++ +
Sbjct: 211 AFPVDYRTRGWSDVAHFHGFASDGLLQFDLAVKEWIGLVAYRL 253
>gi|254504841|ref|ZP_05116992.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440912|gb|EEE47591.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 268
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 69/229 (30%), Gaps = 49/229 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM------HIPDHPSVSAIVVL--------TGEP 47
R+ W G +I GF + Q + S + +++L TG
Sbjct: 41 RFIWVGALGLVI---CGFSPAANLLIQPLEDRFSRPAELGSFNGVIILGGAVDTVVTGAR 97
Query: 48 I---------RIERAFELLEN----------QIGEKIFISGVHHSVSKDILLQKIPIRQD 88
R+ A L + G I+G ++ ++
Sbjct: 98 GETALTVSGERLTIAARLAKQLPEALIIHTGGQGT--IITG---QATESEGASRLFDDFG 152
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+A I + ++ NT NA + L+VT YHMPR+ +
Sbjct: 153 IASQRIILEDESRNTWENAVLTKELVDPKPGQTWLLVTSAYHMPRSMGVFEAAG-WTGVT 211
Query: 149 PYPIISHDLEENSSI----FKIKILRVL---LIEYLKILLLSIQLSLST 190
YP+ K LR L + E++ + + + S
Sbjct: 212 AYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIGLTVYWMTGRSSA 260
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 34/185 (18%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP---------- 47
+ +F+++ + + P + + AI++L G
Sbjct: 10 LAVCTAALFWLLAAGWLTAPLLHLAQPRSQTDAPARFAPRTAIIMLGGGTVYDDNHVLVP 69
Query: 48 -----IRIERAFELLEN-QIGE---KIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RI + + + E + +SG + S ++ +RQ + I
Sbjct: 70 PRDVLARITASAQNYAACKRAEATCHVIVSGGNPQRHSATEADTYLPYLLRQQVPRADIV 129
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + T NA+ SA E + + +++VT Y MPR L+ R F P P+IS+
Sbjct: 130 LENSSRTTYENARNVSAILEGSRYDSLILVTSAYQMPRAMLDFHRFG----FAPQPMISN 185
Query: 156 DLEEN 160
Sbjct: 186 ARRAR 190
>gi|260779195|ref|ZP_05888087.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605359|gb|EEX31654.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
Length = 267
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG VS ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRIMRIYPGSKLILSGYAGGSEVSNARMMAKVALALGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
A++A+A+ ++ +++VT HM R E PYP ++ L +
Sbjct: 165 WEEARQAAAFVKRKK---LVVVTSASHMKRALNEFHSAG----LKPYPAPTNYLAHD 214
>gi|317064197|ref|ZP_07928682.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689873|gb|EFS26708.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI+ISG S+ + ++ + + I I K+
Sbjct: 91 GANARIIKTAQFY-NKYPKKIYISGGSPLQNKESESSVYKRELVALGIPSENIVIEEKSR 149
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN- 160
NT NA E + +++T +H+PR+ + F P P +E
Sbjct: 150 NTRENALYIRKMMEGSKEKKAVLITSAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAE 209
Query: 161 ------SSIFKIKILRVLLIEYLKILLLSIQ 185
K L +LL EY+ +L I+
Sbjct: 210 NFFDYIPEYTNFKKLGILLKEYIGMLYYRIR 240
>gi|257469971|ref|ZP_05634063.1| hypothetical protein FulcA4_11568 [Fusobacterium ulcerans ATCC
49185]
Length = 252
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI+ISG S+ + ++ + + I I K+
Sbjct: 102 GANARIIKTAQFY-NKYPKKIYISGGSPLQNKESESSVYKRELVALGIPSENIVIEEKSR 160
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN- 160
NT NA E + +++T +H+PR+ + F P P +E
Sbjct: 161 NTRENALYIRKMMEGSKEKKAVLITSAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAE 220
Query: 161 ------SSIFKIKILRVLLIEYLKILLLSIQ 185
K L +LL EY+ +L I+
Sbjct: 221 NFFDYIPEYTNFKKLGILLKEYIGMLYYRIR 251
>gi|229592788|ref|YP_002874907.1| hypothetical protein PFLU5409 [Pseudomonas fluorescens SBW25]
gi|229364654|emb|CAY52578.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 253
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 24/157 (15%)
Query: 36 SVSAIVVLTGEPIRIE--------RAFELLENQIGEKI--------FISGV-HHSVSKDI 78
AIVVL R + L + ++ +G H+
Sbjct: 79 RADAIVVLGSGRERGDPAWGTDQPTGIGLERQRYAARLAKASGLPVLTTGGLHYGTPPSE 138
Query: 79 LLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
QD + ++ T NAQ ++ V++VT +HMPR+
Sbjct: 139 AALMAVSMQDDFGVTVRWKEERSRTTWENAQMSAEILLPEGIKRVVVVTQAWHMPRSVWS 198
Query: 138 LQRINSTVQFIPYPI----ISHDLEENSSIFKIKILR 170
++ +P P+ + + + + K +
Sbjct: 199 FEKA--GFTVVPAPVGFLGVDNARPLGGWMPEFKSVW 233
>gi|148241344|ref|YP_001226501.1| hypothetical protein SynRCC307_0245 [Synechococcus sp. RCC307]
gi|147849654|emb|CAK27148.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 186
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
++ P P I+VL G+ R ++A L + G + Q +
Sbjct: 22 PRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVLITGGSNP-----EYAQWVFEG 76
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NST 144
Q + + + Y A +T N + HVL+VT HM R L + + +
Sbjct: 77 QGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDHMDRALLVGRVVAGSRG 136
Query: 145 VQFIPYPIISHD--LEENSSIFKIKILRVLL 173
+ P P+ D E S +R L+
Sbjct: 137 IHLTPVPVPCGDDCRPERRSKVWGDGVRALV 167
>gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073]
gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC
39073]
Length = 461
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 23/193 (11%)
Query: 8 LFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFEL 56
+F LI I+G +I + P I+VL P RI A L
Sbjct: 10 IFAALITLILGSTYWYIEWFGWNTAP--KRADVIIVLGAAVWANGPSPALMERITLAETL 67
Query: 57 LENQIGEKIFISG-VHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ + +G + S +++ I + I + NT N A
Sbjct: 68 YQQVYAATLITTGGIGRSNPTPEGSAARQVLISHGIPANVIYEEVTSSNTRENLVGALNI 127
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
K+ + +IVTHD+H+ R E +R+ + + E + +LR ++
Sbjct: 128 MRKHGWKSAVIVTHDFHLLRAMTEARRLGIE-------VSGAGVHETAMFRPPLVLREVI 180
Query: 174 IEYLKILLLSIQL 186
+K + ++Q+
Sbjct: 181 ANLVKAIGYNLQM 193
>gi|168183333|ref|ZP_02617997.1| putative sanA protein [Clostridium botulinum Bf]
gi|237793971|ref|YP_002861523.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
gi|182673423|gb|EDT85384.1| putative sanA protein [Clostridium botulinum Bf]
gi|229261043|gb|ACQ52076.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
Length = 222
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R + + LI + FI F + ++ D P AI+VL G
Sbjct: 7 RILMVIIVIALIGTAAIFFIDFKVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|325661886|ref|ZP_08150507.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471864|gb|EGC75081.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 241
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPI------------R 49
W + + FI F+ F V M + I+VL R
Sbjct: 54 WLQYILLTLNFIAYFVFFAVQVIICSAMLTLPPKKLDVIIVL--GAQVRGKKITNSLKRR 111
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++R E L+ ++ +SG V++ + + + +AE I + K+ NT N
Sbjct: 112 LDRGIEYLKENPETRVVVSGGQGKGEDVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYEN 171
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + + + IV++++H+ R+ L
Sbjct: 172 LKYSALLVDSMD-DRIGIVSNNFHIYRSLL 200
>gi|87301819|ref|ZP_01084653.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
gi|87283387|gb|EAQ75342.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
Length = 194
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 23/180 (12%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + G + + + HP + I+VL G+ R + A L G + +SG
Sbjct: 4 LLVMALLAGALIVVGRGLLLPSLGHPQL--ILVLGGDIEREKLAGRLAHRD-GLPLLVSG 60
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ L + + + + Y+A +T GN ++ HHVL+VT
Sbjct: 61 GSNPEYAQWLFSQEGLDRRQFR----LDYRARDTLGNFTTVVDDLKRLGIHHVLLVTSSD 116
Query: 130 HMPRTFL--ELQRINSTVQFIPYPII--------------SHDLEENSSIFKIKILRVLL 173
HM R L + + + P + L + + + LR
Sbjct: 117 HMDRALLVGRIVAGSRGIHLTPVAVPCGDRCLPEGRRKVWGDGLRAAAWVLTGRDLRSWA 176
>gi|160881431|ref|YP_001560399.1| hypothetical protein Cphy_3306 [Clostridium phytofermentans ISDg]
gi|160430097|gb|ABX43660.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 189
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 40 IVVLTGE--PIRIERAFELLENQIGEKIFISGVHHSV-----SKDILLQKIPIRQDLAEC 92
I+++ G P +E+A +LLE + + I SG + ++ L+ I I++ ++
Sbjct: 23 IILIPGGSHPQLMEKAVDLLEMGMAKYILPSGGKNKKLPDYPNEADFLKTIAIKRGISSD 82
Query: 93 CIDIGYKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIP 149
I KA NT NA + + V++V YH R Q++ F
Sbjct: 83 IIICENKATNTYENALFSYELLMGKCIDITKVILVCKAYHSRRALFSYQKVFPANTTFFV 142
Query: 150 YPI-ISHDLEENSSIFKIKILRVLLIEYLK 178
P+ + + + + + + +++ E K
Sbjct: 143 CPVTDNRGITKENWFTRNDYIELIMREVEK 172
>gi|260459193|ref|ZP_05807448.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259034747|gb|EEW36003.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 265
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 37/188 (19%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERAFELLENQI-----GEKIF---------------IS 68
P V IVVL G E A L G+++ +S
Sbjct: 70 ARPPLPQKVDGIVVLGGGF---EGAINLTRGGYELSSSGDRMVETAILARRFPQAKVVVS 126
Query: 69 GVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + ++ ++ + + K+ NT NA + E L
Sbjct: 127 GGNGSLFLDGEGDADTAPRLLGPLGVSADRLVLEDKSRNTYENAVFSRKLVEPKPGETWL 186
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPII-------SHDLEENSSIFKIKILRVLLIEY 176
+VT +HMPR + +P+P+ L +++ ++ + + E+
Sbjct: 187 LVTSAFHMPRAKALFDKA--GFPTVPWPVDYRTSGKEGVGLFRDNAADSLENTTMAIREW 244
Query: 177 LKILLLSI 184
+ + +
Sbjct: 245 IGLFAYWL 252
>gi|186476497|ref|YP_001857967.1| hypothetical protein Bphy_1739 [Burkholderia phymatum STM815]
gi|184192956|gb|ACC70921.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 228
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 37/183 (20%)
Query: 6 YGLFVCLIFFIMGFISFIRYV------------KQMHIPDHPSVSAIVVL-TGEPIR--- 49
G ++F+ +G + + + + + + +AIV+L TG R
Sbjct: 10 IGTTTIVLFWAVGAGWLAQPLLDLAQRGAPPGGQTVAPATYAAHTAIVLLGTGTVHRDGK 69
Query: 50 ----------IERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAEC 92
I + +L + +SG + ++ +R+++
Sbjct: 70 LVPPRDAIARIAMSADLYARCKQVSSVCHVIVSGGNPQEHEATEADTYLPYLLREEVPRG 129
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
I + +++ T NA+ +A + +++VT Y MPR L R P P+
Sbjct: 130 DIILENRSMTTYENARNVAAILPDGYYGSLMLVTSAYQMPRALLNFHRFGMN----PLPV 185
Query: 153 ISH 155
+S+
Sbjct: 186 VSN 188
>gi|87123192|ref|ZP_01079043.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
gi|86168912|gb|EAQ70168.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
Length = 250
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 37/199 (18%)
Query: 2 RYFWYGLFVCLIFFIMGFI------SFIRYVKQMHIPDHPSVSAIVVLTGEPI------- 48
R+ G L FF +G + +++ P+ AIVVL+G
Sbjct: 32 RWPLIGALALLWFFSLGLVSQVLWRWLEAPWQRLPAAAAPTADAIVVLSGGRHPAPGAAR 91
Query: 49 --------RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIG 97
R +L ++ +G + + + L I
Sbjct: 92 VSEWEDPDRFLAGLDLYRAGKAPRLLFTGGASPFRPGQPPEGQRYLAEAEQLG-----IP 146
Query: 98 YKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+A+ NT A + + +L+VT +HM R +R V+ P
Sbjct: 147 SEAMASTPVVVNTAEEAVAIRRLLQAPSAR-ILLVTSAFHMRRAQRLFERQGLEVKPFPV 205
Query: 151 PIISHDLEENSSIFKIKIL 169
+ S
Sbjct: 206 DFQTRGAWAGSLWRDPSQW 224
>gi|218779182|ref|YP_002430500.1| hypothetical protein Dalk_1331 [Desulfatibacillum alkenivorans
AK-01]
gi|218760566|gb|ACL03032.1| protein of unknown function DUF218 [Desulfatibacillum alkenivorans
AK-01]
Length = 178
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-IDIGYKAL 101
+G R+E + L + + E + IS + + L+ R L + + KA
Sbjct: 2 FSGAVSRVEATYGLAKEGLAESLVIS---PAT--EQSLRFYKNRYGLPDSVNQVLEPKAR 56
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEE 159
T NA ++ +++V++VTH++HMPR++ L+ + V+ Y + +E
Sbjct: 57 TTFENALLCGEIIKREGWNNVILVTHEHHMPRSYFLLRWVLLGEGVEIQRYGVPLRSIEG 116
Query: 160 NSSIFKIKILRVLLIEYL-------KILLLSIQLSLS 189
I L+++ E + + +L I+ L
Sbjct: 117 REVSTTID-LKIMYNEMVDLWGSLGEWVLYKIRGRLP 152
>gi|297538308|ref|YP_003674077.1| hypothetical protein M301_1116 [Methylotenera sp. 301]
gi|297257655|gb|ADI29500.1| protein of unknown function DUF218 [Methylotenera sp. 301]
Length = 227
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
LTG R++ L + + + +SG + + + + R + I + ++
Sbjct: 86 LTG---RVDEGLLLAQQGLVSTLLMSGGLDYEDERIEAVTMEAHARSKGFQGEILLESRS 142
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLE 158
+T N + E + +++I + YHM R +E + + + Y S
Sbjct: 143 SSTLENLTFSRPILEAADIKNIIITSEPYHMWRVKKLVEAGHLGRKIN-VSYAAASSQCW 201
Query: 159 ENSSIFKIKILR 170
N + LR
Sbjct: 202 VNWGMAFKGALR 213
>gi|78189450|ref|YP_379788.1| hypothetical protein Cag_1489 [Chlorobium chlorochromatii CaD3]
gi|78171649|gb|ABB28745.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 235
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 59/165 (35%), Gaps = 6/165 (3%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSV---SKDILLQ 81
+ + IVVL G+ R+++ EL + +K+ ++G+ S+ +
Sbjct: 53 LLSLPASKPQKADVIVVLGGDKGLRVQKGAELYNDGFSKKVLLTGIDRRYYRPSRPNWRE 112
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + I + K+ + A +A E+ + ++V+ HM R +L
Sbjct: 113 RRIRDLGVKKSAIVVDTKSQTSWEEAMNTAATMERRKWESAIVVSDPPHMLRLWLTWHHA 172
Query: 142 NSTVQFIPYPIISHDLEENS--SIFKIKILRVLLIEYLKILLLSI 184
+ + + + + ++ E K + +
Sbjct: 173 FAGTSKRFTLVATKPDWWHPIFWWKHKTNYKFVVSELKKNIAYVV 217
>gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
Length = 262
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 30/177 (16%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 40 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY--- 98
R L + +I +SG S + + + IG
Sbjct: 100 ELNQAAERFVETLRLAQAYPQARILVSGGD--GSLSGIYEGDAHASENFFGTFGIGSDRL 157
Query: 99 ----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 158 IRAGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 212
>gi|149191740|ref|ZP_01869980.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
gi|148834429|gb|EDL51426.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
Length = 297
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 63/162 (38%), Gaps = 11/162 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG VS + K+ + +A+ I + A +T
Sbjct: 108 RLSEGIRILRMYPGAKLILSGYDGGTGVSHARTMAKVALALGIAKPDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A++A+ + + +++VT HM R E + P ++ E +
Sbjct: 168 ARQAAGFVQNKK---LVLVTSASHMKRAMHEFEAAGLNPLPAPTNFLAQKDIEQAWQKYT 224
Query: 167 KILRVL------LIEYLKILLLSIQLSLSTQTASQFFITLIE 202
R L E + ++ +++ ++ + +F ++ E
Sbjct: 225 PSSRYLEQTERYWHETMGLIWQNLRDWVANEGNQEFLPSVSE 266
>gi|28211594|ref|NP_782538.1| membrane associated protein [Clostridium tetani E88]
gi|28204035|gb|AAO36475.1| membrane associated protein [Clostridium tetani E88]
Length = 192
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RIE + L + G I SG S+S+ +++ I + + E I K+ +T
Sbjct: 60 RIEEGYRLYKEGYGRYILASGGKGPGESISEAEAMKRYLISKGIKEEYIIKEDKSTSTME 119
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
N + + EK + +IV++ YH+ R L +++ F + S+ E
Sbjct: 120 NLKNCNKIMEKKGLKNAVIVSNKYHLKRASLMTKKVGIDSSFSGVYVTSYKKHE 173
>gi|170744388|ref|YP_001773043.1| hypothetical protein M446_6345 [Methylobacterium sp. 4-46]
gi|168198662|gb|ACA20609.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 273
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 59/180 (32%), Gaps = 15/180 (8%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ + G ++ ++ + +V R A + SG
Sbjct: 84 VVVLGGALAEGIRAERGAPGLNREADRLVAFAALARRYPAAKLVFAGGPA-----SGRRE 138
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+++ + + L + + ++ +T NA EA A A L+VT HMP
Sbjct: 139 GLTEAQASRALLEEIGLPPGRLLVDDRSRSTWENAVEARALARPGPGETWLLVTSASHMP 198
Query: 133 RTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLI-----EYLKILLLSIQ 185
R +R + +P+ ++ + ++ I E+ +L ++
Sbjct: 199 RAMGAFRRAGWPP---LLAWPVAYRTTRRGAAALRPLGAKLAAIDLAAHEWAGLLAYRLR 255
>gi|53719541|ref|YP_108527.1| hypothetical protein BPSL1927 [Burkholderia pseudomallei K96243]
gi|126452373|ref|YP_001066022.1| hypothetical protein BURPS1106A_1753 [Burkholderia pseudomallei
1106a]
gi|167816053|ref|ZP_02447733.1| hypothetical protein Bpse9_12987 [Burkholderia pseudomallei 91]
gi|167824429|ref|ZP_02455900.1| hypothetical protein Bpseu9_12213 [Burkholderia pseudomallei 9]
gi|167845961|ref|ZP_02471469.1| hypothetical protein BpseB_11780 [Burkholderia pseudomallei B7210]
gi|226199704|ref|ZP_03795257.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242315371|ref|ZP_04814387.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254179990|ref|ZP_04886589.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254297823|ref|ZP_04965276.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|52209955|emb|CAH35927.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|126226015|gb|ABN89555.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157807296|gb|EDO84466.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|184210530|gb|EDU07573.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|225928290|gb|EEH24324.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242138610|gb|EES25012.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 240
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|224542305|ref|ZP_03682844.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
gi|224524754|gb|EEF93859.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
Length = 210
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 19/198 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IR 49
M+ + + + F + + D + +VL G R
Sbjct: 11 MKILKKLIIIVALVICYVFSNAVSIYIYSFKDDARNADVAIVL-GASTYNGHPSPVYQER 69
Query: 50 IERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I A +L + +KI ++G + VS + + Q + E + ++ T N
Sbjct: 70 INHAVDLYNKHLVKKIIMTGGYGKGNPVSDAYNAKLYAVSQGVPEDDVLTEDQSTVTLEN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + N+ LIV+ HM R L+ I Y +H + K
Sbjct: 130 LINAKKIMDVYNYQTALIVSDPLHMKRAMLQ----AKDAGIIAYTSPTHSSRFRTRDTKF 185
Query: 167 KILRVLLIEYLKILLLSI 184
K L+ +I Y+ +
Sbjct: 186 KFLKREVINYIGYKWYRL 203
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
V TG + + S+ + ++ ++ +
Sbjct: 127 VAFTGGTGWAADGMQ-----------------TASEAEVAAQVALQDYGFTLRWS-ESAS 168
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPIISHD 156
+T GNA+ + +++ + +VTH +HMPR +R +V P PI +H
Sbjct: 169 RDTSGNARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHL 228
Query: 157 LEENSSIFKIKILRVLLIE 175
L+ S ++ R++L E
Sbjct: 229 LQWLPSAQGLQASRLVLRE 247
>gi|53724817|ref|YP_102769.1| hypothetical protein BMA1073 [Burkholderia mallei ATCC 23344]
gi|67641348|ref|ZP_00440128.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121599410|ref|YP_992846.1| hypothetical protein BMASAVP1_A1516 [Burkholderia mallei SAVP1]
gi|124385403|ref|YP_001026188.1| hypothetical protein BMA10229_A0183 [Burkholderia mallei NCTC
10229]
gi|134282282|ref|ZP_01768987.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167003067|ref|ZP_02268857.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167719831|ref|ZP_02403067.1| hypothetical protein BpseD_12495 [Burkholderia pseudomallei DM98]
gi|254178040|ref|ZP_04884695.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254188599|ref|ZP_04895110.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254199716|ref|ZP_04906082.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254206038|ref|ZP_04912390.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254358413|ref|ZP_04974686.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|52428240|gb|AAU48833.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228220|gb|ABM50738.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293423|gb|ABN02692.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134246320|gb|EBA46409.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147749312|gb|EDK56386.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147753481|gb|EDK60546.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148027540|gb|EDK85561.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157936278|gb|EDO91948.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160699079|gb|EDP89049.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238522267|gb|EEP85712.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243061318|gb|EES43504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
Length = 240
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|167854576|ref|ZP_02477357.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
gi|167854331|gb|EDS25564.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ I D+ S AIV+L+G R+ A L+ + G + I+G
Sbjct: 68 DNLSIEDYKSAQAIVLLSGGLRDSKELFGKLAISEIALERVRYA-AFLQKETGLPLLITG 126
Query: 70 VHH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+V K L Q I + KA T NA+ + EK + ++
Sbjct: 127 SSPKGTSEAAVMKKELEQFFHIPTQW------LEEKAKTTAENAKFSKPILEKEGINKIV 180
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + +R
Sbjct: 181 LVTNQWHMQRARMLFER 197
>gi|284039129|ref|YP_003389059.1| hypothetical protein Slin_4276 [Spirosoma linguale DSM 74]
gi|283818422|gb|ADB40260.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 272
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 67/243 (27%)
Query: 1 MRYFWYGLFVCLIFFIMG---------FISFIRYVKQMHIPDHPSVSAIVVLTGE----- 46
+R GL + +F++ G MH P +VLTG
Sbjct: 34 LRRQLIGLALG-VFWLFGNSFLVNELALWWEYPIKPDMHAPGDSVKRVAIVLTGGMINGE 92
Query: 47 ---------------------PIRIERAFELLENQIGEKIFISGV------------HHS 73
RI +A L + +K+ ISG
Sbjct: 93 REAPGKPLNRTHLARFLLGREADRIGQALYLYKTGAVQKVLISGGLGSWPFQPISLNDEG 152
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN----NFHHVLIVTHDY 129
LL +R + I + K+ NT NA+ ++ K+ ++ +V ++T +
Sbjct: 153 HLAGELLIIAGVRPE----DIMLEGKSRNTHENARFSAPILRKHFDKAHYEYV-LITSAW 207
Query: 130 HMPRTFLELQRINSTVQFIPYP---IISHDLEENSSIFKIKILRV-----LLIEYLKILL 181
HM R Q+ VQ IP+P + + L + L+ E++ +
Sbjct: 208 HMKRAIACFQK--EGVQTIPFPSNFLGNRRLSGPAEWLLPDEEAFFESYYLIREFVGYIT 265
Query: 182 LSI 184
+
Sbjct: 266 YKV 268
>gi|189346479|ref|YP_001943008.1| hypothetical protein Clim_0953 [Chlorobium limicola DSM 245]
gi|189340626|gb|ACD90029.1| protein of unknown function DUF218 [Chlorobium limicola DSM 245]
Length = 197
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 7/189 (3%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQ 60
RY + + F+S + + IVVL G+ R+E+ EL N
Sbjct: 7 RYLSIFILSVVTVTAAVFLS-LGFAVSYPAQKPEKADVIVVLGGDDGLRVEKGAELYNNG 65
Query: 61 IGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ ++G+ + ++ + + I + ++ T A AS +K
Sbjct: 66 FAPNVLLTGIDARFYRPGRPNWRERRMRDLGVPKKAIRVDTESETTWEEAVNASETLQKQ 125
Query: 118 NFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ ++V+ HM R +R+ S+ + I R ++ E
Sbjct: 126 KWESAIVVSDPPHMLRIHQTWRRVFEGSSKKIILVSTEPDWWNALLWWKNKTSYRFVISE 185
Query: 176 YLKILLLSI 184
K +
Sbjct: 186 IKKNIYYYA 194
>gi|316933607|ref|YP_004108589.1| hypothetical protein Rpdx1_2264 [Rhodopseudomonas palustris DX-1]
gi|315601321|gb|ADU43856.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 34/192 (17%)
Query: 25 YVKQMHIPDH---PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEK 64
+ + + P H + I+VL G R+ +L +
Sbjct: 64 SLSERYPPWHDTGRAPDGIIVLGGAINSEVSAARNTVELDASAERVLATLDLARRYPQAR 123
Query: 65 IFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
I SG + S ++ L ++ R LA + + ++ T NA A
Sbjct: 124 IVYSGGSGNLIQRSAAEAPLAGELLERFGLAAGRVVLEDQSRTTAENAANTRALVSPKPG 183
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR-------VL 172
L+VT +HMPR+ + Q V + YP+ L V
Sbjct: 184 ELWLLVTSSFHMPRSIMAFQAAGFDV--VAYPVDWRTRGREDVALPFATLAAGLARTDVA 241
Query: 173 LIEYLKILLLSI 184
E+ +L +
Sbjct: 242 AHEWAGLLAYRL 253
>gi|304316432|ref|YP_003851577.1| hypothetical protein Tthe_0963 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777934|gb|ADL68493.1| protein of unknown function DUF218 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 191
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------PIRIERAFELL 57
+ ++ I+ ++ + + + AI+VL R+ A +L
Sbjct: 7 ITAFVVLLNIIAELQVITFAYNAKPVNSDAIIVL--GCAVYGKNPSPFFKERLSEAIKLY 64
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ +G+ I +SG +S+ ++ ++ + + + + + +T N + +
Sbjct: 65 KEGLGKYIIVSGGKGPGEDISEAEAGKEYLLKNGITDNVVLMDDGSYSTLQNLENSKKIM 124
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
++ + +IV++ +H+ R
Sbjct: 125 DEKSLKTAIIVSNKFHLKRA 144
>gi|52424963|ref|YP_088100.1| hypothetical protein MS0908 [Mannheimia succiniciproducens MBEL55E]
gi|52307015|gb|AAU37515.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 250
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIER-AFELLENQIGEKI--------FISGV 70
+ + D+ S AIVVL +I L + + ISG
Sbjct: 70 DNLTVEDYRSAQAIVVLGAGLRDSKELYNKITVPGIALERMRYAAYLHKETELPILISGA 129
Query: 71 HH-SVSKDILLQK-----IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
S+ ++ + ++ + ++ NT+ NA E+ +++
Sbjct: 130 GPNGNSEAKIMGQEFFTFFGVQPKW------LEERSTNTKQNALYTREMLEREGIKRIIL 183
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R L +
Sbjct: 184 VTNQWHMQRAKLLFEA 199
>gi|255065363|ref|ZP_05317218.1| putative SanA protein [Neisseria sicca ATCC 29256]
gi|255050188|gb|EET45652.1| putative SanA protein [Neisseria sicca ATCC 29256]
Length = 224
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 22/165 (13%)
Query: 7 GLFVCLIFFIMGFI-----SFIRYVKQMHIPDHPSVSAIVVLT-----GEP------IRI 50
+F+ ++FF + V ++ A VVL+ G R+
Sbjct: 33 LVFILVLFFTAALLPLWIMWRDFQVSRLDADTVRPADAAVVLSTRSYEGGRLNPCLVARV 92
Query: 51 ERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
E A EL +K+ +SG S +Q I + +++ I +A NT N
Sbjct: 93 EAAVELYRAGKVKKLVMSGGLSRDFQSASGNMQAIAEKMGVSKEDIIQERRAENTFENIV 152
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYP 151
+ + E N V+IV+ +H+ R + Q +Q P
Sbjct: 153 FSRDFIE--NSPRVVIVSAGFHLARAQMMADRQWQGHDIQVYAAP 195
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 34/182 (18%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP---------- 47
+F F+++ + ++ P + + AI++L G
Sbjct: 47 LAIFTVAFFWLLAAGWLTAPLLRLAQPHWRTEAPATFAPRTAIIMLGGGTIYGAGQVLMP 106
Query: 48 -----IRIERAFELLEN-QIGE---KIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RI + E + + +SG + ++ +R+ + I
Sbjct: 107 PRDVLARIAASAEYYAACKRAADICHVIVSGGNPQRHRATEADTYLPYLLRRQVPRADIV 166
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++L T NA+ S + + ++++T Y MPR L+ R P P+IS+
Sbjct: 167 LENRSLTTYENARNVSGIVHGSRYDSLILITSAYQMPRALLDFHRFG----LTPQPMISN 222
Query: 156 DL 157
+
Sbjct: 223 AI 224
>gi|325578228|ref|ZP_08148363.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159964|gb|EGC72093.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 30/142 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R +L L+ + + I+G
Sbjct: 68 DHLTLQDYQQAQAIVLL-GGGLRDSKELYAPLASTGIQLERLRYAAFLQKETHLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ++ + L + I KAL T+ NA EK H ++
Sbjct: 127 ASPTGAIEAKIAAEELQNFFNVPTKW------IEPKALTTKENALFTKQMLEKEGIHKII 180
Query: 124 IVTHDYHMPRTFLELQRINSTV 145
+VT+++HM R L Q+ V
Sbjct: 181 LVTNEWHMQRAKLLFQQQGFDV 202
>gi|77465405|ref|YP_354908.1| hypothetical protein RSP_3403 [Rhodobacter sphaeroides 2.4.1]
gi|77389823|gb|ABA81007.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 280
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 135 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 174
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR +P+P
Sbjct: 175 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 233
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 267
>gi|294852515|ref|ZP_06793188.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
gi|294821104|gb|EFG38103.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|17987093|ref|NP_539727.1| hypothetical protein BMEI0810 [Brucella melitensis bv. 1 str. 16M]
gi|163843442|ref|YP_001627846.1| hypothetical protein BSUIS_A1225 [Brucella suis ATCC 23445]
gi|189024327|ref|YP_001935095.1| hypothetical protein BAbS19_I11160 [Brucella abortus S19]
gi|225852674|ref|YP_002732907.1| hypothetical protein BMEA_A1222 [Brucella melitensis ATCC 23457]
gi|254689399|ref|ZP_05152653.1| hypothetical protein Babob68_04337 [Brucella abortus bv. 6 str.
870]
gi|254693883|ref|ZP_05155711.1| hypothetical protein Babob3T_04332 [Brucella abortus bv. 3 str.
Tulya]
gi|254697533|ref|ZP_05159361.1| hypothetical protein Babob28_07456 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701918|ref|ZP_05163746.1| hypothetical protein Bsuib55_13827 [Brucella suis bv. 5 str. 513]
gi|254704463|ref|ZP_05166291.1| hypothetical protein Bsuib36_11145 [Brucella suis bv. 3 str. 686]
gi|254710250|ref|ZP_05172061.1| hypothetical protein BpinB_08247 [Brucella pinnipedialis B2/94]
gi|254714246|ref|ZP_05176057.1| hypothetical protein BcetM6_13021 [Brucella ceti M644/93/1]
gi|254717682|ref|ZP_05179493.1| hypothetical protein BcetM_15020 [Brucella ceti M13/05/1]
gi|254730428|ref|ZP_05189006.1| hypothetical protein Babob42_04352 [Brucella abortus bv. 4 str.
292]
gi|256031744|ref|ZP_05445358.1| hypothetical protein BpinM2_14019 [Brucella pinnipedialis
M292/94/1]
gi|256044830|ref|ZP_05447734.1| hypothetical protein Bmelb1R_10074 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113736|ref|ZP_05454540.1| hypothetical protein Bmelb3E_13258 [Brucella melitensis bv. 3 str.
Ether]
gi|256257645|ref|ZP_05463181.1| hypothetical protein Babob9C_09914 [Brucella abortus bv. 9 str.
C68]
gi|256263835|ref|ZP_05466367.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168877|ref|ZP_05755688.1| hypothetical protein BruF5_11021 [Brucella sp. F5/99]
gi|260546638|ref|ZP_05822377.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565570|ref|ZP_05836054.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260754918|ref|ZP_05867266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758135|ref|ZP_05870483.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761961|ref|ZP_05874304.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883930|ref|ZP_05895544.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214170|ref|ZP_05928451.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261219524|ref|ZP_05933805.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317810|ref|ZP_05957007.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322019|ref|ZP_05961216.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752483|ref|ZP_05996192.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755142|ref|ZP_05998851.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758366|ref|ZP_06002075.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988841|ref|ZP_06101398.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991256|ref|ZP_06103813.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995092|ref|ZP_06107649.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982753|gb|AAL51991.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|163674165|gb|ABY38276.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
gi|189019899|gb|ACD72621.1| Protein of unknown function DUF218 [Brucella abortus S19]
gi|225641039|gb|ACO00953.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260095688|gb|EEW79565.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151638|gb|EEW86732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260668453|gb|EEX55393.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672393|gb|EEX59214.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675026|gb|EEX61847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873458|gb|EEX80527.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915777|gb|EEX82638.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260924613|gb|EEX91181.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294709|gb|EEX98205.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297033|gb|EEY00530.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738350|gb|EEY26346.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742236|gb|EEY30162.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744895|gb|EEY32821.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262766205|gb|EEZ11994.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002040|gb|EEZ14615.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093964|gb|EEZ17898.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661038|gb|EEZ31299.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|326409195|gb|ADZ66260.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538905|gb|ADZ87120.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|302392084|ref|YP_003827904.1| hypothetical protein Acear_1326 [Acetohalobium arabaticum DSM 5501]
gi|302204161|gb|ADL12839.1| protein of unknown function DUF218 [Acetohalobium arabaticum DSM
5501]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 51 ERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E +L+ + GV S +++++ + + E I + KA NT NA
Sbjct: 130 ETGLDLVVSG--------GVVPGADNTSGAEVMKEVLLDLGVKEDKIILEKKAKNTWQNA 181
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ E+ + +++VT HM R +R N + IP P
Sbjct: 182 VNTALLLEEREYEQIILVTSALHMKRAVYSFER-NCNQRLIPAP 224
>gi|256159910|ref|ZP_05457632.1| hypothetical protein BcetM4_13019 [Brucella ceti M490/95/1]
gi|256255144|ref|ZP_05460680.1| hypothetical protein BcetB_12801 [Brucella ceti B1/94]
gi|261222341|ref|ZP_05936622.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265998306|ref|ZP_06110863.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920925|gb|EEX87578.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552774|gb|EEZ08764.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|161619130|ref|YP_001593017.1| hypothetical protein BCAN_A1197 [Brucella canis ATCC 23365]
gi|260566292|ref|ZP_05836762.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335941|gb|ABX62246.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260155810|gb|EEW90890.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|23502055|ref|NP_698182.1| hypothetical protein BR1177 [Brucella suis 1330]
gi|62290089|ref|YP_221882.1| hypothetical protein BruAb1_1183 [Brucella abortus bv. 1 str.
9-941]
gi|82700013|ref|YP_414587.1| hypothetical protein BAB1_1199 [Brucella melitensis biovar Abortus
2308]
gi|225627645|ref|ZP_03785682.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815595|ref|ZP_04594592.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256369602|ref|YP_003107112.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297248487|ref|ZP_06932205.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
gi|23348011|gb|AAN30097.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196221|gb|AAX74521.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616114|emb|CAJ11155.1| Protein of unknown function DUF218 [Brucella melitensis biovar
Abortus 2308]
gi|225617650|gb|EEH14695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788893|gb|EEP63104.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999764|gb|ACU48163.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297175656|gb|EFH35003.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
Length = 268
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 52 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 111
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 112 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 171
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 172 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 219
>gi|331085682|ref|ZP_08334765.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406605|gb|EGG86110.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 241
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPI------------R 49
W + + FI F+ F V M + I+VL R
Sbjct: 54 WLQYILLTLNFIAYFVFFAVQVIICSAMLTLPPKKLDVIIVL--GAQVRGKKITNSLKRR 111
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++R L+ ++ +SG V++ + + + +AE I + K+ NT N
Sbjct: 112 LDRGVAYLKENPETRVVVSGGQGKGEDVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYEN 171
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + + + IV++++H+ R+ L
Sbjct: 172 LKYSALLVDSMD-DRIGIVSNNFHIYRSLL 200
>gi|114319324|ref|YP_741007.1| hypothetical protein Mlg_0162 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225718|gb|ABI55517.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 55/180 (30%), Gaps = 24/180 (13%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG 69
+ AIVVL R+ A L + G + SG
Sbjct: 64 PPVQPAQLRDAQAIVVLGAGYRSGADEFSGETVNDLALVRLRYA-AYLHRETGLPVIASG 122
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + + I +A +T GNAQ + + V +V+H +
Sbjct: 123 GAATDREPEARWMAEVLAEFGVDPILTESEARDTWGNAQHTAELLARQGLSRVALVSHAH 182
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSS------IFKIKILRVLLIEYLKILLLS 183
HMPR ++ TV P S +++ + + EYL +
Sbjct: 183 HMPRAVWAFEQAGVTVLPAPTGAFVPHDRGWSWGMLRPQANALRMSWLAMHEYLGLFWYR 242
>gi|323499476|ref|ZP_08104447.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
gi|323315463|gb|EGA68503.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
Length = 267
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG +S ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRIMRIYPGSKLILSGYAGGSEISNARMMAKVALALGVSKSDIVLLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E PYP ++ L ++
Sbjct: 165 WEEARQAAAFVK---HRKLVVVTSASHMQRALNEFHSAG----LKPYPAPTNYLAHDN 215
>gi|239624750|ref|ZP_04667781.1| exported protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521136|gb|EEQ61002.1| exported protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 26/188 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI---- 48
+ L CL+ F++ + K + + I+VL G P
Sbjct: 14 FLVLALAGCLVLFLVNLYIIRKEEKYIVSAEEARAFEDVDCIMVLGCGVRPDGSPSGMLN 73
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + L + + +++ +SG H V+ D L+++ I + + I + + +T
Sbjct: 74 DRLVQGISLYKEDVSDRLLMSGDHGKVNYDEVNLMKQFAIDRGVPSENIFMDHAGFSTYE 133
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + ++IVT YHM R + + Y + S K
Sbjct: 134 SMYRARDIFQ---VKKIVIVTQRYHMYRAL----YVAQAMGMEAYGVASDPRTYGG--QK 184
Query: 166 IKILRVLL 173
++ LR LL
Sbjct: 185 MRDLRELL 192
>gi|159044137|ref|YP_001532931.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
gi|157911897|gb|ABV93330.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
Length = 213
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 22/156 (14%)
Query: 1 MRYFW----YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------- 46
MR W G+ V + F + F + Y P +AIVVL+
Sbjct: 4 MRALWQLCKIGVLVLMGFAVATFAGIVLY----EPPARSEYAAIVVLSHGVAADGTLSPQ 59
Query: 47 -PIRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
R + + E K+ SG SK L+ + I L + ++ +
Sbjct: 60 TAARTQAGLDAFEAGYAPKVIFSGGLGGLEPASKGALMAEAAIAAGLPAEVAMVEGESHS 119
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
T NA + + VL+VTH YH R+
Sbjct: 120 TLQNALFTARLVPELRDQPVLLVTHRYHGMRSIASF 155
>gi|78187520|ref|YP_375563.1| hypothetical protein Plut_1666 [Chlorobium luteolum DSM 273]
gi|78167422|gb|ABB24520.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 246
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 26 VKQMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV 70
+++ AIVVL G R E +L + +G
Sbjct: 61 ARRVPAASVAHADAIVVLGGMTMQLPGAPLGEWGEAADRFEAGIDLYREGKAPLLVFTGG 120
Query: 71 -----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ V + LL ++ D+ + + A NT A A+ + +++V
Sbjct: 121 RLPWRENFVPEGELLALRALQLDIPRASVLVTGIAGNTSDEAGAAAELLGPS--KKIILV 178
Query: 126 THDYHMPRTFLELQRIN 142
T +HMPR+ L R
Sbjct: 179 TSAFHMPRSILLFHRAG 195
>gi|120402709|ref|YP_952538.1| hypothetical protein Mvan_1708 [Mycobacterium vanbaalenii PYR-1]
gi|119955527|gb|ABM12532.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 190
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHHSVS 75
G F + AIVVL G R L E + +S + S
Sbjct: 29 GTFLFA----HSKVDPLARADAIVVL-GGEHDGRETYGLTLAEQGYAPVVLLS--NPYRS 81
Query: 76 KDILLQKIPIRQDLAE--CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
KD ++ K + C + T G A A+K+ + V++V+ YH+PR
Sbjct: 82 KDKVMAKACAPRTDIRVICRAPVPS---TTRGEAMMTRELADKHGWTTVIVVSWRYHLPR 138
Query: 134 T 134
Sbjct: 139 A 139
>gi|170760763|ref|YP_001786003.1| putative sanA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407752|gb|ACA56163.1| putative SanA protein [Clostridium botulinum A3 str. Loch Maree]
Length = 222
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RILTVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|325127259|gb|EGC50197.1| hypothetical protein NMXN1568_2007 [Neisseria meningitidis N1568]
Length = 214
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|304392434|ref|ZP_07374375.1| periplasmic protein [Ahrensia sp. R2A130]
gi|303295538|gb|EFL89897.1| periplasmic protein [Ahrensia sp. R2A130]
Length = 189
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 22/157 (14%)
Query: 33 DHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGV---HHSVSKDI 78
+ S AIVVL G R A L + + + +SG H
Sbjct: 2 ELKSAYAIVVLGAAVWKDGRASPALERRTRHAIALHQQGLAPILVLSGGLGRHPPTEAKA 61
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ +I + + + + + + ++ NT N ++A + + VL+V+ YH+PR +
Sbjct: 62 -MAEICMGEGVPQAALLLEGRSTNTFENVAFSAALLREKRVNSVLVVSDAYHLPRAKMCF 120
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ + FI + + R L E
Sbjct: 121 RYLG----FIATGSAAVAGPTTPWY---RTARYWLRE 150
>gi|221369405|ref|YP_002520501.1| hypothetical protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
gi|221162457|gb|ACM03428.1| Hypothetical Protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
Length = 267
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 122 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA A A L+VT +HMPR +P+P
Sbjct: 162 LEGQSRNTAENAHFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 220
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 254
>gi|123966515|ref|YP_001011596.1| hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
gi|123200881|gb|ABM72489.1| Hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
Length = 236
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 30/181 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGF---IS--FIRYVKQMHIPDHPSVSAIVVLTGEPI------- 48
+R+ + L + L+F F + K++ S IVVL+G
Sbjct: 14 LRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVVLSGGRHLPLGNTK 73
Query: 49 --------RIERAFELLENQIGEKIFISGVHHSVS-----KDILLQKIPIRQDLAECCID 95
R EL + K+ +G ++ + + K I + + +
Sbjct: 74 IIEWHDPDRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIKEAISMGIPKKDVL 133
Query: 96 IGYKALNTEGNAQEASAWAEKNN---FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
Y NT A+ A + +++VT +HM R +R + +PYP+
Sbjct: 134 TTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAFHMKRAKKVFER--EGMNVLPYPV 191
Query: 153 I 153
Sbjct: 192 D 192
>gi|332561062|ref|ZP_08415380.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
gi|332274860|gb|EGJ20176.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
Length = 267
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 122 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR +P+P
Sbjct: 162 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 220
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 254
>gi|307298224|ref|ZP_07578028.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916310|gb|EFN46693.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 252
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 8 LFVCLIFFIM--GFI--SFIRYVKQMH-IPDHPSVSAIVVLTGE--------------PI 48
+ +C +++ GF +++ +++ + P++ S AIVVL+
Sbjct: 46 IILCFFAYLLSTGFGTHLYLQPLERAYTAPNNVSGQAIVVLSSGIIISPEGQVLDNHSVA 105
Query: 49 RIERAFEL-LENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ +A+ L L+ ++ I ++G +V+ L++ + + +A + + A T
Sbjct: 106 RLSKAYSLHLQTKL--PIIVTGSFMPGRSTVAVSELMRDWLLDRGVASSKVIVEPMAQTT 163
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
NA+ ++ + N+ +++VT HM R ++ ++ P+P
Sbjct: 164 WENARYSADICSQFNWSSIVLVTSAVHMKRAVTSFEKF--GLRVTPFP 209
>gi|28198681|ref|NP_778995.1| hypothetical protein PD0776 [Xylella fastidiosa Temecula1]
gi|28056772|gb|AAO28644.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|307579820|gb|ADN63789.1| hypothetical protein XFLM_09510 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 202
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 30/191 (15%)
Query: 3 YFWYGLFVCLIFF----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------I 48
+ W + V L+FF + G+I +I Q S I+VL
Sbjct: 11 WQWICVLVVLVFFWLVAVAGWIVWIGQRDQAA-----SSDVIIVLGAAAYDAKPSPVFEE 65
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD----ILLQKIPIRQDLAECCIDIGYKALNTE 104
RI L ++ + +G S + ++ +R D+ I I + T
Sbjct: 66 RIRHGLYLYQHGYAPTLIFTGGFGGSSARFAESQVARRYALRYDVPSRAILIETVSRTTR 125
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
N +A ++V+ HM R R+ + + S
Sbjct: 126 QNLIQARQLMRVYGLRRAIVVSDPLHMARAL----RLCRELDIDALASATPSTRFRSLHT 181
Query: 165 KIKILRVLLIE 175
+ R LL E
Sbjct: 182 R---WRFLLQE 189
>gi|330721274|gb|EGG99364.1| Putative membrane protein [gamma proteobacterium IMCC2047]
Length = 256
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 25/133 (18%)
Query: 39 AIVVLTGEPIRIERA--------------FEL-----LENQIGEKIFISGV---HHSVSK 76
AIVVL R A L L + G + ++G V +
Sbjct: 83 AIVVL--GSGRYRAAPEYGGQDTAKPMGLVRLRYGAYLHRKTGLPLLVTGGAWLDDFVPE 140
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + L + ++ T NA+ + + +L+VTH +HMPR
Sbjct: 141 AEFMARVLEEEFLVKATWQ-EPRSRTTWENAKYSRELTGSDGVQKILLVTHAWHMPRALY 199
Query: 137 ELQRINSTVQFIP 149
+R V P
Sbjct: 200 SFERAGFDVTAAP 212
>gi|226308856|ref|YP_002768816.1| hypothetical protein RER_53690 [Rhodococcus erythropolis PR4]
gi|226187973|dbj|BAH36077.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 21/168 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------IR 49
R+ + + + + + A VV+ R
Sbjct: 19 RWVAGIAVLGAVVYAGSIVWISVASAGHTSDAADAPDAPVVIVLGAQIKDGKPMAFLKGR 78
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNA 107
++ A EL+E + + +SG + S D + + Q + E I L+T
Sbjct: 79 LDAAVELVEAGKAKAVLVSGDANGGSGDEIAAMTNYLVEQGIDERRIVGDPYGLDTYDTC 138
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
A LIVT YH+PR + V + S
Sbjct: 139 FRA---IHTYGVTKALIVTQGYHVPRAV----ALCRDVGIDADGVNSD 179
>gi|298244343|ref|ZP_06968149.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
gi|297551824|gb|EFH85689.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
Length = 239
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 48/221 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPI-------RIERA 53
+ W + L F + ++ F K+ + D V AIVVL G ++E A
Sbjct: 6 KVLWAISAITLSFIFI-WLLFYTRGKRFALRDKLQKVDAIVVLAGTRGNVEFLHKKVETA 64
Query: 54 FELLENQIGEKIFISG---------------------VHHS-VSKDILLQKIP------- 84
L + + I G V + + + +
Sbjct: 65 ARLYRDGWAKHIICGGKFSAKVTDSPQLMSQEELRLAVDQGRIQEKDIARAAATWDIALG 124
Query: 85 --------IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + I + ++L+T A+ +K+ ++ +++VT +H RT+L
Sbjct: 125 ARYMRDKAMAYGVPDDAIVLEEESLHTRETAEYVLDIVQKHKWYKIILVTSPFHQLRTYL 184
Query: 137 ELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++ +Q Y S + +L E
Sbjct: 185 TFAKVFLPYDIQISNYYADSDSWHPMAWFLSKSNRELLDSE 225
>gi|325143399|gb|EGC65728.1| hypothetical protein NMB9615945_0016 [Neisseria meningitidis
961-5945]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|17227740|ref|NP_484288.1| hypothetical protein all0244 [Nostoc sp. PCC 7120]
gi|17135222|dbj|BAB77768.1| all0244 [Nostoc sp. PCC 7120]
Length = 174
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 14/167 (8%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIR-IER---AFELLENQIGEKIFIS 68
+ F+ + F Q + A++VL G R +ER I+IS
Sbjct: 1 MLFLPLLMWFGY---QEAKNAYTQPQAVIVL-GGSTRNLEREKFTASFARKHPNLPIWIS 56
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G V + +K I + Y+A++T N + V ++T D
Sbjct: 57 GGSPPVYTKRVFKKAGIDTKRLH----LDYEAVDTVTNFTTLIDELQSRGIKSVYLITSD 112
Query: 129 YHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+HM R E+ + + F P + S + E R LL
Sbjct: 113 FHMRRACIIGEIVLGSRGITFKPISVPSENSPEPIEKSLRDGARALL 159
>gi|325133332|gb|EGC55998.1| hypothetical protein NMBM13399_2155 [Neisseria meningitidis M13399]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F ++ F + + +P H A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPHVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|75908946|ref|YP_323242.1| hypothetical protein Ava_2734 [Anabaena variabilis ATCC 29413]
gi|75702671|gb|ABA22347.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 167
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 14/160 (8%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIR-IER---AFELLENQIGEKIFISGVHHSVS 75
+ F Q + A++VL G R +ER I+ISG V
Sbjct: 1 MWFGY---QEAKNAYTQPQAVIVL-GGSTRNLEREKFTASFARQHPNLPIWISGGSPPVY 56
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT- 134
+ +K I + Y+A++T N + V ++T D+HM R
Sbjct: 57 TKRVFKKAGIDTKRLH----LDYEAVDTVTNFTTLIDELQSRGIKSVYLITSDFHMRRAC 112
Query: 135 -FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
E+ + + F P + S + E R LL
Sbjct: 113 IIGEIVLGSRGITFKPISVPSENSPEPIEKSLRDGARALL 152
>gi|218661819|ref|ZP_03517749.1| hypothetical protein RetlI_21178 [Rhizobium etli IE4771]
Length = 214
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 17/115 (14%)
Query: 47 PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQD-LAECCIDI 96
R A L + +I +SG + + + I +D L E
Sbjct: 57 ADRFVEALRLAQKFPQSRILVSGGDGSLSGIYEGDAAASERFFPLFGIGKDRLIE----- 111
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 112 ERQSRTTFENAVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 164
>gi|77461176|ref|YP_350683.1| hypothetical protein Pfl01_4955 [Pseudomonas fluorescens Pf0-1]
gi|77385179|gb|ABA76692.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 259
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 36/177 (20%)
Query: 10 VCLIFFIMGFI---------SFIRYVKQMHIPD-------HPSVSAIVVLTGEPIRIE-- 51
+C GF + +++ AIVVL R +
Sbjct: 37 LCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRADAIVVLGSGRERGDLA 96
Query: 52 ------RAFELLENQIGEKI--------FISGV-HHSVSKDILLQKIPIRQDLAECCIDI 96
L + ++ SG H+ +D +
Sbjct: 97 WGEDQPTGVGLERQRYAARLAKASGLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRW 156
Query: 97 -GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ T NA+ ++ +++VT +HMPR Q+ + +P P+
Sbjct: 157 QEGESRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQQA--GFEVVPAPV 211
>gi|254671270|emb|CBA08572.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|126463807|ref|YP_001044920.1| hypothetical protein Rsph17029_3048 [Rhodobacter sphaeroides ATCC
17029]
gi|126105618|gb|ABN78148.1| protein of unknown function DUF218 [Rhodobacter sphaeroides ATCC
17029]
Length = 280
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 135 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 174
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR+ +P+P
Sbjct: 175 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRSVETFCAAGWQ-NLVPWPTDYR 233
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 267
>gi|301156135|emb|CBW15606.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 247
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 30/142 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R A +L L+ + + I+G
Sbjct: 68 DHLTLQDYQQAQAIVLL-GGGLRDSKELYAPLASTAIQLERLRYAAFLQKETHLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ++ + L + I KAL T+ NA EK H ++
Sbjct: 127 ASPTGAIEAKIAAEELQNFFNVPTKW------IEPKALTTKENALFTKQMLEKEGIHKII 180
Query: 124 IVTHDYHMPRTFLELQRINSTV 145
+VT+++HM R L Q+ V
Sbjct: 181 LVTNEWHMQRAKLLFQQQGFDV 202
>gi|298370494|ref|ZP_06981810.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281954|gb|EFI23443.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 220
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 23/187 (12%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELL 57
+ ++ G + + +P + A VVL G RI A L
Sbjct: 24 ILLVLAVFAGNVWQVYRTGNQTLPAAATADAAVVL-GAAAWNKQPSPVFLERINHAIALY 82
Query: 58 ENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ KI +G +++ + ++ ++Q + I + NT N +
Sbjct: 83 QSHRVGKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAKNILFENTSRNTYENLRNIKPIL 142
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
N+ ++IV+ YH+ R + ++ + P D E R L
Sbjct: 143 RANSVDSIIIVSDPYHLARAQAIARDLDLNAEVSATPTTRFDAREKKG-------RFLFQ 195
Query: 175 E-YLKIL 180
E YL L
Sbjct: 196 ESYLLFL 202
>gi|46143233|ref|ZP_00135637.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207969|ref|YP_001053194.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae L20]
gi|126096761|gb|ABN73589.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 252
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM R + +R V
Sbjct: 184 IILVTNQWHMKRAKMLFEREGFNV 207
>gi|313669320|ref|YP_004049604.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006782|emb|CBN88252.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FQERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|241888952|ref|ZP_04776256.1| integral membrane protein [Gemella haemolysans ATCC 10379]
gi|241864201|gb|EER68579.1| integral membrane protein [Gemella haemolysans ATCC 10379]
Length = 345
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + GL V L F + + V + + +VVL RI +
Sbjct: 135 YSYVGLVV-LYFLCIAMSYLVSSVLNIINILPRRIDYVVVLGAGLIGERVTPLLASRIRK 193
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+ + G K+ +SG VS+ ++ Q + E I + K+ +TE N
Sbjct: 194 GINVYKANPGSKLIMSGGQGPDEVVSEAFAMKNYAFEQGVDENDIILEDKSTSTEENIIF 253
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + + +VT+ YH+ R ++ + +
Sbjct: 254 SKKFIPAD--KSFAVVTNYYHVYRALVQARTLG 284
>gi|295397171|ref|ZP_06807275.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294974593|gb|EFG50316.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 193
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 59/184 (32%), Gaps = 16/184 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + + + ++G I+ + IVV G R A +LLE
Sbjct: 7 VRLAGFFAGIMIAIGLLGVITLSNLIVDEEP---RVSDIIVVPEGASERAGEAVDLLEAG 63
Query: 61 IGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
SG V + L ++ I+ G A +T NA+ ++
Sbjct: 64 YSR----SGKIIVSPLTQSN--LDFYVGAGAPSDALINEG-NATSTYTNARNTLKMMQEL 116
Query: 118 NFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ +I + DYHM R E Q + E + ++ R L E
Sbjct: 117 GYDSAVITSSDYHMLRTKMIYERQNRHYGFDLTYVATYHDVAGEEVTWWQANR-RAGLSE 175
Query: 176 YLKI 179
K
Sbjct: 176 IRKF 179
>gi|224373337|ref|YP_002607709.1| hypothetical protein NAMH_1317 [Nautilia profundicola AmH]
gi|223588336|gb|ACM92072.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 240
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 29/211 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVKQMHIPDHPSVSAIVVLTGEPI----------- 48
+ ++ V L F++ + ++ + D + SA+VVL G
Sbjct: 33 KIVFFSAAVLLWAISTKFVANALLYPLEHGYKSDTITPSAVVVLGGGTNSRDVLKAMPDA 92
Query: 49 --RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG----YKALN 102
R + + + IF G ++ + ++K I L C DI ++LN
Sbjct: 93 FKREVYGLLIAKQESLPYIFTGGGIQNIKEAENIKK-DIDMILKTCNCDIETFYENRSLN 151
Query: 103 TEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI-ISHDLEEN 160
T NA+ + EK N + +VT YHM R + Q IP P+ +D E
Sbjct: 152 TFQNAKYTAKLFEKLNLSKKIYLVTSAYHMKRAIMIFNNF--GFQIIPKPVGFYYDNEYT 209
Query: 161 SSIFKIKILRV-----LLIEYLKILLLSIQL 186
+ EY ++ +++
Sbjct: 210 FWDIFPNAGNFYHSYKAIHEYFGLIKTYLRI 240
>gi|115525420|ref|YP_782331.1| hypothetical protein RPE_3419 [Rhodopseudomonas palustris BisA53]
gi|115519367|gb|ABJ07351.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 267
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 29/186 (15%)
Query: 32 PDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHSV 74
+ + IVVL G R+ +L +I +G +
Sbjct: 74 AEGRAPDGIVVLGGSIDSDISAARNALETDASAERVFAMLDLARRYPNARIVFTG-GSAN 132
Query: 75 SKDILLQKIPIRQDLAEC------CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ P+ L E I + + T NA L+VT
Sbjct: 133 LIGDTAAEAPVAGQLLEQFGIAPDRIVLESGSRTTAENATMTRDLVAPKPGERWLLVTSA 192
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF---KIKILR--VLLIEYLKILLLS 183
+HMPR+ + I V+ P + + F + R V + E++ ++
Sbjct: 193 FHMPRSIGVFRAIGFEVEAYPVDWRTRGWIDLRWPFGKLSAGLARIDVAVHEWVGLIAYR 252
Query: 184 IQLSLS 189
+ ++
Sbjct: 253 LTGRIA 258
>gi|34499564|ref|NP_903779.1| hypothetical protein CV_4109 [Chromobacterium violaceum ATCC 12472]
gi|34105415|gb|AAQ61770.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 199
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 26/197 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEP-----------I 48
+R G + ++ ++GF + D P A +VL G
Sbjct: 4 LRLMLRGFLLAVLLVVLGFACVAWSIVDYGSGDEVPGADAALVL-GAAAWGNKPSPVFRE 62
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L ++ I +G + + ++ RQ + + + ++ T
Sbjct: 63 RINHAVKLYQSGKVRWIVFTGGTPEPGYPAEADVGREFAARQGVPMTAMLVENQSRTTWQ 122
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N A + L+V+ HM R L + ++ P P S +S
Sbjct: 123 NLSNARDLGNQFGIRSYLLVSDPLHMRRAV--LMAGDLGLRAYPAPTQSSRFRTLASWS- 179
Query: 166 IKILRVLLIE---YLKI 179
R L E Y+
Sbjct: 180 ----RFLARETWLYVGY 192
>gi|218440733|ref|YP_002379062.1| hypothetical protein PCC7424_3813 [Cyanothece sp. PCC 7424]
gi|218173461|gb|ACK72194.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 194
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 11/157 (7%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + L +G + ++ + AI+VL G R A L I++
Sbjct: 20 VMILLPLLTVGSWWSYKQIQSYLVKPE----AILVLGGHEERERFAAHLAAKNPQLPIWV 75
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S S + + D + YKA +T N + V ++T
Sbjct: 76 SSGSPSNYVKRIFANAGVNSDRLH----LDYKAKDTVTNFTTLVDKLKAQGIDSVYLITS 131
Query: 128 DYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSS 162
+ HM R + E+ + + P + S S
Sbjct: 132 ENHMRRARIIGEIVFGSRGIIIKPVAVPSDA-PSESW 167
>gi|322804976|emb|CBZ02535.1| sana protein [Clostridium botulinum H04402 065]
Length = 222
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 31/172 (18%)
Query: 8 LFVCLIFFIMGFIS--FIRYVKQMH-------IPDHPSVSAIVVLTGE------------ 46
L V + +MG + FI + + D P AI+VL G
Sbjct: 9 LVVIMAIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCDML 67
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +T
Sbjct: 68 EDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTY 127
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + ++IVT YH+ R +++ Y + S
Sbjct: 128 ESMYRAKEIFKAKK---IIIVTQQYHLMRAVYIARKLGLD----AYGVNSDQ 172
>gi|261401556|ref|ZP_05987681.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269208394|gb|EEZ74849.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|332528861|ref|ZP_08404835.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
gi|332041720|gb|EGI78072.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 12/157 (7%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDI 96
L R+ A LL+ + + +G S+ ++ + Q + + +
Sbjct: 101 ALNSAAERLTAALPLLQREPRLVLLYTGGEGELLASGPSEAERARRFYVEQGVPPARLLL 160
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ NT NA ++A + L++T +HMPR+ ++ V P+P
Sbjct: 161 ESASRNTHDNAVFSAALPGVDRTRPWLLITSAWHMPRSLRTFRKAGWNVT--PWPTDYRA 218
Query: 157 LEENSSIFK-----IKILRVLLIEYLKILLLSIQLSL 188
++ L E L + ++ L
Sbjct: 219 GLTTPWHQYSLSQGAAKWQLALHELLGLAAYRLRGWL 255
>gi|161524938|ref|YP_001579950.1| hypothetical protein Bmul_1765 [Burkholderia multivorans ATCC
17616]
gi|160342367|gb|ABX15453.1| protein of unknown function DUF218 [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 32/203 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ FI + + + +HP + ++VL R +
Sbjct: 65 RRIALAAVALFWLIASGWLAAPFIAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 124
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 125 PPRDGAARIRKAAELYRSCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGVDPGDL 184
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 185 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 240
Query: 155 HDLEENSSIFKIKILRVLLIEYL 177
+ E + + V+ E+
Sbjct: 241 NRREAQTGWL-PRWSNVVATEFA 262
>gi|261391563|emb|CAX48996.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
Length = 218
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIDSVVIVSDPYHLARA 162
>gi|229156674|ref|ZP_04284762.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
gi|228626843|gb|EEK83582.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
Length = 219
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGVENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|309379839|emb|CBX21615.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|83593886|ref|YP_427638.1| hypothetical protein Rru_A2551 [Rhodospirillum rubrum ATCC 11170]
gi|83576800|gb|ABC23351.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 206
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 18/160 (11%)
Query: 23 IRYVKQMHIPDHPSVS--AIVVL------TGEPI-----RIERAFELLENQIGEKIFISG 69
+ P + A+VVL G P R+ L ++ +SG
Sbjct: 12 AEETDRAFPPAGRAGEGCAVVVLGARVLGDGRPSPALERRVLHGVALARRHPAARLLLSG 71
Query: 70 VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
D ++ + + +A + + +AL+T GNA+ + VL+VT
Sbjct: 72 GATGGPLDEAWVMATLALGAGIAAERLILEDRALDTLGNARHSLPLLRAARIGRVLLVTD 131
Query: 128 DYHMPRTFLELQRINST---VQFIPYPIISHDLEENSSIF 164
HMPR L + + ++ P P + +IF
Sbjct: 132 PSHMPRALLSFRAVAGDHLRLRAAPTPCPAGGWRNRRAIF 171
>gi|93007196|ref|YP_581633.1| hypothetical protein Pcryo_2372 [Psychrobacter cryohalolentis K5]
gi|92394874|gb|ABE76149.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 259
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 28/201 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGE----------P 47
+ WYGL++ +++ F F+ ++Q P V+AI+VL
Sbjct: 62 LSRLWYGLWMVFFIWLISFGIFVYALQQQIKQSAKPIPRVAAIIVLGSGTVAGKPTPTLA 121
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNT 103
R++ A L+ +Q G + SG + S+ ++ D+ I ++ +T
Sbjct: 122 KRLDTAAPLINSQKGALVITSGGIGFGQTHSEAYIMATYLYDTYDIPLKHILQEGQSTST 181
Query: 104 EGNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFLELQR---INSTVQFIPYPIISHDL 157
N + + IVT D+H+ R + + T+ P P+ +
Sbjct: 182 AENLIYSQEILAAKGISIKAPIAIVTSDFHIIRAANIARHQGYVQPTMLASPTPL---SI 238
Query: 158 EENSSIFKIKIL--RVLLIEY 176
N+ + L EY
Sbjct: 239 RYNAWFREYFAFVSGWLFGEY 259
>gi|116624473|ref|YP_826629.1| hypothetical protein Acid_5395 [Candidatus Solibacter usitatus
Ellin6076]
gi|116227635|gb|ABJ86344.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 195
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 18/177 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-IRYVKQMHIPDHPS-VSAIVVLTGEPI----------- 48
R W G+ + + +M +++F ++Q + + I+VL G
Sbjct: 3 RLLWNGIALAAVV-VMFYVAFLSLRIEQQSVREEAQPADVILVL-GAAEYRGRPSPVLRA 60
Query: 49 RIERAFELLENQIGEKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A +L + +I SG ++ + + + + I + + +T
Sbjct: 61 RLDHALDLYSRKFAPRILTTGGSGGDPIFTEGGVGRSYLTQHGVPSDAIIVETEGESTVE 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
+ A+ + H V++V+ YH+ R L+ T P P S
Sbjct: 121 STTMAAEIMRRMELHSVIVVSDGYHIYRVKQMLEAHGMTAYGSPRPDHSQSPLHLRW 177
>gi|167894539|ref|ZP_02481941.1| hypothetical protein Bpse7_12379 [Burkholderia pseudomallei 7894]
Length = 240
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLENQIGEKI----FISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|42782182|ref|NP_979429.1| hypothetical protein BCE_3127 [Bacillus cereus ATCC 10987]
gi|42738107|gb|AAS42037.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 210
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGTENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|196228088|ref|ZP_03126955.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196227491|gb|EDY21994.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 29/148 (19%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP----------------IRIERAFELLENQIGEKIFISG- 69
+ I + P AIV+L G R+ A E+ + + G
Sbjct: 70 AGVKIDELPKADAIVMLGGGSAPSRYEALGVHLTQAGDRLVMAHEVYRLGKAPVLLLGGN 129
Query: 70 VHH--------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
V+ S L + I +D I +G + +T A + +A A+++ +H
Sbjct: 130 VNKLDGVRKFESEIVRDLFKTWGIPEDAM---IPLG-ENQDTHDEALKTAALAKEHGWHR 185
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIP 149
VL+VT HM R L+ V +P
Sbjct: 186 VLLVTSASHMRRASGVLRAQGLEVIPVP 213
>gi|76811194|ref|YP_333307.1| hypothetical protein BURPS1710b_1908 [Burkholderia pseudomallei
1710b]
gi|126441655|ref|YP_001058770.1| hypothetical protein BURPS668_1731 [Burkholderia pseudomallei 668]
gi|167738833|ref|ZP_02411607.1| hypothetical protein Bpse14_12248 [Burkholderia pseudomallei 14]
gi|167911178|ref|ZP_02498269.1| hypothetical protein Bpse112_11843 [Burkholderia pseudomallei 112]
gi|167919203|ref|ZP_02506294.1| hypothetical protein BpseBC_11665 [Burkholderia pseudomallei
BCC215]
gi|217423472|ref|ZP_03454973.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254259791|ref|ZP_04950845.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76580647|gb|ABA50122.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126221148|gb|ABN84654.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|217393330|gb|EEC33351.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254218480|gb|EET07864.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 240
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLENQIGEKI----FISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|148378651|ref|YP_001253192.1| exported protein [Clostridium botulinum A str. ATCC 3502]
gi|153933579|ref|YP_001383034.1| putative sanA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934960|ref|YP_001386583.1| putative sanA protein [Clostridium botulinum A str. Hall]
gi|226947902|ref|YP_002802993.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
gi|148288135|emb|CAL82203.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152929623|gb|ABS35123.1| putative SanA protein [Clostridium botulinum A str. ATCC 19397]
gi|152930874|gb|ABS36373.1| putative SanA protein [Clostridium botulinum A str. Hall]
gi|226841482|gb|ACO84148.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
Length = 222
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R F + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H + D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|237711018|ref|ZP_04541499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750614|ref|ZP_06086677.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454862|gb|EEO60583.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237510|gb|EEZ22960.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 252
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 14/157 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL---------LQKIPIRQDLAECCIDIG 97
R+ L ++ K+ ++ + +++ + + +
Sbjct: 95 ADRLLEGIRLYKHGRIRKLVLASDGSIIESKDGKGLQGNAADMKQYLADLGMPLEDVILE 154
Query: 98 YKALNTEGNAQEASAWA-EKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFI-PYP-I 152
+A NT NA L++T HM R+ +P I
Sbjct: 155 TRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNPDTYITDTFPEI 214
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
S + L E++ L ++ S
Sbjct: 215 KGEKTNFLPSWHVLASWPELTHEWVGYLYYRLRHKPS 251
>gi|254719238|ref|ZP_05181049.1| hypothetical protein Bru83_06801 [Brucella sp. 83/13]
gi|265984234|ref|ZP_06096969.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837987|ref|ZP_07470845.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
gi|264662826|gb|EEZ33087.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406911|gb|EFM63132.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
Length = 264
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGDRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|121635807|ref|YP_976052.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120867513|emb|CAM11290.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|254672612|emb|CBA06344.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|325131248|gb|EGC53960.1| hypothetical protein NMBM6190_2077 [Neisseria meningitidis M6190]
gi|325137422|gb|EGC60010.1| hypothetical protein NMBES14902_2053 [Neisseria meningitidis
ES14902]
Length = 218
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIDSVVIVSDPYHLARA 162
>gi|167746537|ref|ZP_02418664.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|317471356|ref|ZP_07930711.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|167653497|gb|EDR97626.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|316901162|gb|EFV23121.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 228
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 30/172 (17%)
Query: 2 RYF-WYGLFVCLIFF----IMGFISFIRYVKQMHIPDHP---------SVSAIVVL---- 43
R+ W L + LIF G F+ + + I A+VVL
Sbjct: 7 RWSRWLKLLLILIFAGILTAGGINWFMIHQSKKDIETARQLALEQKGKKADAVVVLGAKV 66
Query: 44 --TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCI 94
G R++ + + + ++I +SG H + D + ++ I+Q + I
Sbjct: 67 RKDGSMCLMLKERVDLGIQAYKQGLADRIIMSGDHGAEGYDEVSTMKAYAIKQGIPSEHI 126
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +T A + +++VT YH+ R + + + V+
Sbjct: 127 FKDHAGFSTYETMYRARDVFKA---KSIVVVTQKYHLYRAVYDAKALGLEVK 175
>gi|225386502|ref|ZP_03756266.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
gi|225047421|gb|EEG57667.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
Length = 253
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 22/161 (13%)
Query: 26 VKQMHIPDHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHHSV 74
V + V I+VL G P R+ + L + +++ +SG H V
Sbjct: 67 VTPEQAAELDKVDCILVLGCGVRDDGSPSGMLNDRLLQGIALYNAGVSDRLLMSGDHGRV 126
Query: 75 SKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
D L+++ I + I + + +T + A + +++VT +YHM
Sbjct: 127 DYDEVNLMKQFAIDHGVPSEDIFMDHAGFSTYESMYRARDIFQAE---RIVVVTQEYHMY 183
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
R ++ Y + S + KI+ R +L
Sbjct: 184 RALYNAGQMGMD----AYGVASDPRKYGG--QKIRDAREML 218
>gi|89096104|ref|ZP_01168997.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
gi|89088958|gb|EAR68066.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
Length = 226
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 17/175 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISG----VHHSVSKDILLQKI 83
D S I VL R+ +A EL + K+ SG + + LL++
Sbjct: 49 DKKSGECIFVL--GSSKAAEYRLPKALELYNSGRAGKLLFSGGVVWAPSRLCEAELLKEK 106
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQ 139
+ + I I ++L+T+ N + ++ + +L+VT H+ R +L ++
Sbjct: 107 ALALGIPAADILIENQSLHTKENVLASLLVLDREFNLHKIKRILVVTASCHIRRAYLAMK 166
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
+++ P+ E + E K L+ ++ + T
Sbjct: 167 TYMPDWIEYSLCPVDDIHTIEGNWQLSEAGRLRAKREAEK-LIYYVKQGIIIDTE 220
>gi|220910044|ref|YP_002485355.1| hypothetical protein Cyan7425_4689 [Cyanothece sp. PCC 7425]
gi|219866655|gb|ACL46994.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 262
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 40/206 (19%)
Query: 21 SFIRYVKQMHIPDH-PSVSAIVVLTGE----------------PIRIERAFELLENQIGE 63
++ ++ ++P P+ +AIVVL G R+ A +L +
Sbjct: 59 WLLQTLETQNLPGSLPNAAAIVVLGGAIKGADPPRPWIEVAEAGDRLLYAAKLYRDGKAP 118
Query: 64 KIFISG-------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ +SG + + + + + + +LNT NA ++
Sbjct: 119 LVILSGGRISWLSTATAAPESADMAILIETMGVPASALLQDSTSLNTYQNAVNVQKILKE 178
Query: 117 NNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD-------------LEENSS 162
N +L+VT +HMPR R+ + I P H L S
Sbjct: 179 KNITGSILLVTSAFHMPRALAIFNRL--GIPAIAAPTDFHTTQTAELSGAIGFLLSLLPS 236
Query: 163 IFKIKILRVLLIEYLKILLLSIQLSL 188
++ + L EY+ +++ ++ L
Sbjct: 237 AETLQNTTLALKEYVGLVVYRLRGWL 262
>gi|312892082|ref|ZP_07751582.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311295454|gb|EFQ72623.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 260
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 30/188 (15%)
Query: 26 VKQMHIPDHPSVSAIVV-------------LTGEPIRIERAFELLENQIGEKIFISGVH- 71
+ Q P+ AIV+ G R + +L I +SG +
Sbjct: 64 ITQGPPPEGKYSCAIVLGGFSSADQDGNGYFNGSADRFIKTLQLKVTGRVPLILMSGGNG 123
Query: 72 -----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIV 125
++ + + ++ + CI I ++ NT NA L+V
Sbjct: 124 QLIKTSNLKEADYVFSQFKAFNIPDSCIMIENQSRNTLENAMFTKRILIDKKVPGPYLLV 183
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK--------IKILRVLLIEYL 177
T +HM R+ ++I + PYP + S+ + + + E +
Sbjct: 184 TSAFHMRRSAYIFKKI--GINVTPYPCDFIAGKSAVSLSDFIIPDPLALAQWNIYIKEVV 241
Query: 178 KILLLSIQ 185
+ ++
Sbjct: 242 GFVAYYLK 249
>gi|190149832|ref|YP_001968357.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307249724|ref|ZP_07531703.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307263153|ref|ZP_07544774.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914963|gb|ACE61215.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306858232|gb|EFM90309.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306871515|gb|EFN03238.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIIAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM R + +R V
Sbjct: 184 IILVTNQWHMKRAKMLFEREGFNV 207
>gi|253584074|ref|ZP_04861272.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834646|gb|EES63209.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI++SG S+ + ++ I + I I K+
Sbjct: 102 GANTRIMKTAQFY-NKYPKKIYVSGGTPLQNKESESSVYKRELIGLGVPAEDIVIEEKSR 160
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NT+ NA E+ +++T +HMPR+ + + F P P E
Sbjct: 161 NTKENAVYIKKMMEEAKEKKAVLITSAFHMPRSVKTFDKGEEGLIFYPAPCDFMAKSETE 220
Query: 162 SIFKI-------KILRVLLIEYLKILLLSIQ 185
+ F K L +LL EY+ ++ I+
Sbjct: 221 NFFDYIPKYVNFKKLGLLLKEYIGMVYYKIR 251
>gi|229097607|ref|ZP_04228566.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
gi|229106282|ref|ZP_04236779.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|229116606|ref|ZP_04245993.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228666916|gb|EEL22371.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228677137|gb|EEL31517.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|228685877|gb|EEL39796.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
Length = 219
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIHSYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|168178023|ref|ZP_02612687.1| putative sanA protein [Clostridium botulinum NCTC 2916]
gi|182670781|gb|EDT82755.1| putative sanA protein [Clostridium botulinum NCTC 2916]
Length = 222
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R F + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RMFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H + D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|15644422|ref|NP_229474.1| hypothetical protein TM1674 [Thermotoga maritima MSB8]
gi|4982249|gb|AAD36741.1|AE001808_16 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 237
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L + F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAAIVYLFSSYVGEFLFLWPLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGV--HHSV---------------SKDILLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + S+ ++++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRSEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R +R +V P
Sbjct: 151 RNTYENALFTRE---KIGDVPIILVTDSIHMRRAVFTFKRFFQSVTPYP 196
>gi|325135386|gb|EGC58007.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325201201|gb|ADY96655.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207058|gb|ADZ02510.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|307260971|ref|ZP_07542653.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869273|gb|EFN01068.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 17/140 (12%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIGEKIF 66
+ + +++ I D+ AIVVL G R I A L Q G I
Sbjct: 68 VTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTGLPIL 127
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++G + D + + + TE NA + A ++ +++V
Sbjct: 128 VTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILV 187
Query: 126 THDYHMPRTFLELQRINSTV 145
T+ +HM R + +R V
Sbjct: 188 TNQWHMKRAKMLFEREGFNV 207
>gi|170078552|ref|YP_001735190.1| hypothetical protein SYNPCC7002_A1947 [Synechococcus sp. PCC 7002]
gi|169886221|gb|ACA99934.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 218
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ LI G I++ R + AI VL G R A + + K+
Sbjct: 25 RWFVLGLIGLTCGAIAYQRIQGALRP-----AKAIFVLGGHEERERFAAQFAQEHPDLKV 79
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++S + I D + + Y+A +T N ++ N V ++
Sbjct: 80 WVSSGSPPEYARQIFANYQIEGDRLQ----LDYQAEDTVTNFTSLVDEFKQENIDSVYLI 135
Query: 126 THDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
T + HM R L + + P P+ S + E +
Sbjct: 136 TSENHMNRAKLVASIVFGTRDIAIKPVPVPSDNPPETT 173
>gi|254804041|ref|YP_003082262.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
gi|254667583|emb|CBA03327.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
Length = 218
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|291278482|ref|YP_003495317.1| hypothetical protein DEFDS_0049 [Deferribacter desulfuricans SSM1]
gi|290753184|dbj|BAI79561.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 237
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 18/165 (10%)
Query: 38 SAIVVLTGEP-----------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIP 84
A+V+L G R+ + L+ + + I +SG V ++ + L+ +
Sbjct: 74 DAVVILGGGVYADGELKEDSLKRLVEGY-LIAKKANKPIILSGGKVFKNLEPESLIMRNK 132
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRIN 142
+ + I I + +T NA NNF+ VL++T YH R+ E IN
Sbjct: 133 LLNLGFDGEIFIDDTSKDTNENATFVKKIIAANNFNKVLLITSGYHAMRSKMLFEKHGIN 192
Query: 143 STVQFIPYPIISHD--LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
S V + I ++ + + ++ EYL IL S++
Sbjct: 193 SCVVLVDKKIDKKYNFVDFLPVASNLHTISKVIKEYLGILYYSMK 237
>gi|323493229|ref|ZP_08098358.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
gi|323312495|gb|EGA65630.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
Length = 267
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRIYPGAKLILSGYAAGSEVSNARMMAKVALALGVAKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ +++VT HM R E PY ++ L ++
Sbjct: 165 WEEARQAAAFVSTKK---LVVVTSASHMKRALNEFHSAG----LKPYAAPTNYLAHDN 215
>gi|37680486|ref|NP_935095.1| hypothetical protein VV2302 [Vibrio vulnificus YJ016]
gi|320155855|ref|YP_004188234.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423949|ref|NP_760999.2| membrane protein [Vibrio vulnificus CMCP6]
gi|37199234|dbj|BAC95066.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931167|gb|ADV86031.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus MO6-24/O]
gi|319999327|gb|AAO10526.2| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus CMCP6]
Length = 266
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L+ G K+ +SG S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILKMYPGSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E P P ++ L + +
Sbjct: 168 ARQAAAFVRQKQ---LVLVTSASHMARAMKEF----HDAGITPLPAPTNYLAQKN 215
>gi|167587349|ref|ZP_02379737.1| hypothetical protein BuboB_18529 [Burkholderia ubonensis Bu]
Length = 224
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 57/187 (30%), Gaps = 33/187 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVL----------------- 43
+F+++ + + +HP + VL
Sbjct: 10 IAAVAFALFWLLATGWLAAPLIAWSQAGVTPVEHPDMHGQTVLILLGTGTRRIDGRLEPR 69
Query: 44 TGEPIRIERAFELLEN--QIGEK--IFISGVHHS---VSKDILLQKIPIRQDLAECCIDI 96
T RI + L + Q E+ + +SG ++ + + + + +
Sbjct: 70 TDGFPRIRKTAALYRDCRQRAERCTVIVSGGDPERHGATEAATYAPYLVARGVDPRDLML 129
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ T NA+ + + ++VT Y M R L+ + Q P+ ++
Sbjct: 130 EANSRTTYENAKFTTPILRSRHVDATILVTSSYQMRRALLDFRHFGIDAQ----PVYANR 185
Query: 157 LEENSSI 163
+ +
Sbjct: 186 RDAQTGW 192
>gi|294507679|ref|YP_003571737.1| hypothetical protein SRM_01864 [Salinibacter ruber M8]
gi|294344007|emb|CBH24785.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 180
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I + K+ NT NA + ++ + VL+VT HMPR + P +
Sbjct: 56 ILLESKSANTYENATRTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAPTDVQ 115
Query: 154 SHD-----LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
D L+ + + EY+ L+ + + S
Sbjct: 116 VGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYDWRGWIDGPAGS 161
>gi|226364924|ref|YP_002782706.1| hypothetical protein ROP_55140 [Rhodococcus opacus B4]
gi|226243413|dbj|BAH53761.1| hypothetical protein [Rhodococcus opacus B4]
Length = 185
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 5/138 (3%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
+ H+ V AI+VL G+ R E EL + +S H D + +
Sbjct: 31 SKSHVDPMRPVDAIIVLGGDRDGREEYGIELAREGFSTNVVLS--HPYWKGDRKMAEFCA 88
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
QD + + T G A A ++ + VL+++ YH+PR +
Sbjct: 89 IQDQRFTVTCVPPQPRTTRGEALFTRDLAAQHGWTSVLVISWRYHLPRARYIFSQCFEG- 147
Query: 146 QFIPYPIISH-DLEENSS 162
+ + P+ D
Sbjct: 148 EIVMRPVPRDYDFSVAHW 165
>gi|304388801|ref|ZP_07370857.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304337253|gb|EFM03431.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 218
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|118591094|ref|ZP_01548493.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
gi|118436170|gb|EAV42812.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
Length = 265
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 53/171 (30%), Gaps = 23/171 (13%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-----------------VLTGEP 47
+ GL VC ++ + + I+ LT
Sbjct: 47 FAGLVVCAFSPAANWLIVPLEDRFQRPATLENYDGIIILGGAVDTVVTGVRGDTALTMSA 106
Query: 48 IRIERAFELLENQIGEKIFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ L + KI +G V ++ ++ +A I + ++ N
Sbjct: 107 ERVTITARLAKALPAAKIIHTGGQGMIVSSQATEAEGAARLFRDFGIAPERIILEDQSQN 166
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
T NA A + L+VT YHMPR+ ++ YP+
Sbjct: 167 TWQNAVYAKKIVQPQPGQRWLLVTSAYHMPRSMGVFEKAG-WTGVTAYPVD 216
>gi|116073939|ref|ZP_01471201.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
gi|116069244|gb|EAU74996.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
Length = 193
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 15/177 (8%)
Query: 2 RYFWY-GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
R+ W G + + + + + + P+ I+VL G+ R +L
Sbjct: 4 RWGWVAGAGLLGVVCALPLRPYHQALVTAQPPER-----ILVLGGDVDRERAGLQL---- 54
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ + V S + + L E + + Y+A +T GN +
Sbjct: 55 -ARRLNLPLVVSGGSNPEYAHWLMETEGLREGQVVLDYRANDTLGNFTSLVDDLREQGVQ 113
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPII--SHDLEENSSIFKIKILRVLL 173
HVL+VT + H+PR L + ++ P+ ++E+ LR L
Sbjct: 114 HVLLVTSEDHLPRALTVGSLVAGSRGIRLTGVPVSCGVDCVQESPGKRWGDGLRALA 170
>gi|121534257|ref|ZP_01666081.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
gi|121307027|gb|EAX47945.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
Length = 192
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 26 VKQMHIPDHPSVSAIVVL----------TGEPIRIERAFELLENQIGEKIFISGV---HH 72
V Q+ P+ I+VL T +R++ A +L + I +SG
Sbjct: 29 VGQLAKPEP--GDVIIVLGAKLIGHEPSTMLRLRLDEAAKLYQAGYAPFIIVSGAQGCDE 86
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+S+ ++ I + I + K+ NT+ N + A ++ +IV++ H+
Sbjct: 87 VISEAAAMRNYLIAHGVPADRILLEDKSFNTQQNLANSLAIMREHGLQRAIIVSNASHIR 146
Query: 133 RTFLELQRINSTVQFIPYPIISHD 156
R + + P P+ ++
Sbjct: 147 RALVIAHNLGMEASGAPAPMANNA 170
>gi|303252155|ref|ZP_07338323.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247491|ref|ZP_07529536.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648938|gb|EFL79126.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855994|gb|EFM88152.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 252
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|218767273|ref|YP_002341785.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121051281|emb|CAM07557.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319409538|emb|CBY89825.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
Length = 218
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|221197747|ref|ZP_03570793.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204695|ref|ZP_03577712.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221214890|ref|ZP_03587858.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221165117|gb|EED97595.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221175552|gb|EEE07982.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181679|gb|EEE14080.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 238
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ F+ + + + +HP + ++VL R +
Sbjct: 22 RRIALAAVALFWLIASGWLAAPFVAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 81
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 82 PPRDGAARIRKAAELYRTCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGIDPGDL 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 142 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 197
Query: 155 HDLEENSSI 163
+ E ++
Sbjct: 198 NRREAHTGW 206
>gi|294085382|ref|YP_003552142.1| hypothetical protein SAR116_1815 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664957|gb|ADE40058.1| DUF218 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 264
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 44/223 (19%)
Query: 2 RYFWYGLFVCLIF-FIMGFI-------SFIRYVKQMHIPDHPSVSAIVVL---TG----- 45
R+ V +I + GFI F+ + I + + I++L TG
Sbjct: 36 RWARMFTIVAVILPLLYGFIPLSHIPLQFLENRFDVPILEGRPLDGIIILGGHTGNGEIS 95
Query: 46 ----------EPIRIERAFEL---------LENQIGEKIFISGVHHSVSKDILLQKIPIR 86
R A L L + ++ G + + LL ++ +
Sbjct: 96 EGRGQPQLSAAAERFTTALHLHRQFPDLPILFSGFSGELMPKGWSETQTIKRLLDELGMA 155
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ I + NT NA + ++VT HMPR +
Sbjct: 156 ESP---NILFESTSRNTYENALYSETVLSPQPGSFWVLVTSASHMPRAVGSFRNAGWG-G 211
Query: 147 FIPYPIISHDLEEN-----SSIFKIKILRVLLIEYLKILLLSI 184
IPYP+ L + + + ++ EY + +
Sbjct: 212 VIPYPVDYQTLPSGFPYIWNLPRGLHTMTIVFHEYAGLFAYWL 254
>gi|308388228|gb|ADO30548.1| putative periplasmic protein [Neisseria meningitidis alpha710]
Length = 214
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|289209654|ref|YP_003461720.1| hypothetical protein TK90_2494 [Thioalkalivibrio sp. K90mix]
gi|288945285|gb|ADC72984.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 43/192 (22%)
Query: 27 KQMHIPDHPS---VSAIVVLTGE--------PIRIERAFELLENQIGEKI--------FI 67
+ PD AIVVL L+ + + +
Sbjct: 28 EGFAPPDDNQLADAQAIVVLGAGYRSGAEEFSGETVHDLALVRLRYAAYLHHRTGLPVMV 87
Query: 68 SGVHHSVSK------DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SG +L++ + L E A +T GNA+ ++
Sbjct: 88 SGGGPEERVPEADYMAEVLKEYGVHPILRE------PNARDTWGNARHSAEQLHAEGIER 141
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK--------ILRVLL 173
V +V+H +HMPR +R ++ IP P ++ +N + + L
Sbjct: 142 VALVSHAHHMPRATWSFERA--GLEIIPAPTGAYVPRDNGWSLEGFRPQASAVWASWLAL 199
Query: 174 IEYLKILLLSIQ 185
EY + +
Sbjct: 200 HEY--WGMAWYR 209
>gi|307151691|ref|YP_003887075.1| hypothetical protein Cyan7822_1814 [Cyanothece sp. PCC 7822]
gi|306981919|gb|ADN13800.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 200
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 11/175 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+ +++ + + G+ S+ + P+ AIVVL G R A L
Sbjct: 14 LTLLRQIIYLLPVVSVGGWWSYNEIQSYLVKPE-----AIVVLGGHEERERYAAHLASKN 68
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S S + K + + YKA +T N +
Sbjct: 69 PTLPIWVSSGSPSNYVKRIFAKAGVNSTRLH----LDYKAKDTVTNFTTLVDQLKAQGID 124
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V ++T + HM R ++ E+ + + P + SH E+ R LL
Sbjct: 125 SVYLITSENHMRRAWIVGEIVFGSRGIVIKPLAVPSHARPESFKKCLRDGARALL 179
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 61.4 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 18/157 (11%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP--------IRIERAFE 55
L + +I FI I + + ++VL G+P R++ A
Sbjct: 3 LILIVIGFIYLLIVAAFMFSGARAKPNGNADTVLVLGARVNGDPAEPSSVLKERLDTAVA 62
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L K+ +SG S S+ ++++ + Q +A I++ K+ TE N + +
Sbjct: 63 YLNENPTLKVIVSGGQGEDESASEASVMEEYLVNQGIARNRINVEDKSTRTEENLKYSK- 121
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
K N +IVT DYHM R + +R +P
Sbjct: 122 --GKFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLP 156
>gi|325143566|gb|EGC65887.1| hypothetical protein NMBM01240013_2108 [Neisseria meningitidis
M01-240013]
gi|325205110|gb|ADZ00563.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 218
Score = 61.4 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|228986175|ref|ZP_04146317.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773556|gb|EEM21980.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|229139714|ref|ZP_04268284.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
gi|228643845|gb|EEL00107.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|217960516|ref|YP_002339078.1| hypothetical protein BCAH187_A3129 [Bacillus cereus AH187]
gi|217066516|gb|ACJ80766.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|52142423|ref|YP_084406.1| hypothetical protein BCZK2819 [Bacillus cereus E33L]
gi|206974549|ref|ZP_03235465.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|222096575|ref|YP_002530632.1| epih/gdmh-related protein [Bacillus cereus Q1]
gi|51975892|gb|AAU17442.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|206747192|gb|EDZ58583.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|221240633|gb|ACM13343.1| EpiH/GdmH-related protein [Bacillus cereus Q1]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|47564233|ref|ZP_00235278.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
gi|47558385|gb|EAL16708.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|229197269|ref|ZP_04324000.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
gi|228586228|gb|EEK44315.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + + I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKDEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGVENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|15675952|ref|NP_273070.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|7225229|gb|AAF40483.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|316984529|gb|EFV63495.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325129274|gb|EGC52113.1| hypothetical protein NMBOX9930304_1979 [Neisseria meningitidis
OX99.30304]
gi|325139474|gb|EGC62014.1| periplasmic protein [Neisseria meningitidis CU385]
gi|325199239|gb|ADY94694.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 214
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|239787465|emb|CAX83936.1| conserved uncharacterized protein [uncultured bacterium]
Length = 258
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 19/174 (10%)
Query: 26 VKQMHIPDHPSVSAI-VVLTGEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQ 81
+ P P V TG RI L + G I SG S+ L++
Sbjct: 86 LGHGRYPAAPEYDGADTVNTGGLARIRYG-AWLHRRTGLPILTSGGKPFQEKESEAQLMK 144
Query: 82 -----KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + E + NT NA+ HVL+VTH HM R
Sbjct: 145 RALEKEFGVPVRWTED------SSDNTLENARNTQKILAAQGIDHVLLVTHGNHMVRALQ 198
Query: 137 ELQRINSTVQFIP--YPIISHDLEENSSIF-KIKILRVLLIEYLKILLLSIQLS 187
+ + P + + + + + + V L EY+ L ++
Sbjct: 199 TFHQAGLKITPAPTLFQTPTPNAGILDWLPLSCRGVWVPLHEYVGRLWYQLRCG 252
>gi|229488511|ref|ZP_04382377.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229324015|gb|EEN89770.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 235
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 21/168 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------IR 49
R+ + + + + + A VV+ R
Sbjct: 25 RWVAGIAVLGAVVYAGSIVWISVASAGHTSDAADAPDAPVVIVLGAQIKDGKPMAFLKGR 84
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNA 107
++ A EL+E + + +SG + S D + + Q + I L+T
Sbjct: 85 LDAAVELVEAGKAKAVLVSGDANGGSGDEIAAMTNYLVEQGIDARRIVGDPYGLDTYDTC 144
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
A LIVT YH+PR + V + S
Sbjct: 145 FRA---IHTYGVTKALIVTQGYHVPRAV----ALCRDVGIDADGVNSD 185
>gi|254197234|ref|ZP_04903656.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|169653975|gb|EDS86668.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
Length = 240
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ + F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFEWFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|110633611|ref|YP_673819.1| hypothetical protein Meso_1258 [Mesorhizobium sp. BNC1]
gi|110284595|gb|ABG62654.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 268
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCI 94
+ LT R+ + E +I +SG + H ++ L +++ ++ + I
Sbjct: 102 IALTDAAERLTKTAEFNRLYPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADRI 161
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
++ ++ NT NA E+ A A L+VT +HMPR + +PYP+
Sbjct: 162 ELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFRAA--GFPVLPYPVDY 219
Query: 155 HDLEENSSIFKIKIL 169
S +
Sbjct: 220 LARRSALSSLAPSVA 234
>gi|325203138|gb|ADY98591.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 218
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|189350313|ref|YP_001945941.1| hypothetical protein BMULJ_01475 [Burkholderia multivorans ATCC
17616]
gi|189334335|dbj|BAG43405.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 238
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 32/203 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ FI + + + +HP + ++VL R +
Sbjct: 22 RRIALAAVALFWLIASGWLAAPFIAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 81
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 82 PPRDGAARIRKAAELYRSCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGVDPGDL 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 142 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 197
Query: 155 HDLEENSSIFKIKILRVLLIEYL 177
+ E + + V+ E+
Sbjct: 198 NRREAQTGWL-PRWSNVVATEFA 219
>gi|148560243|ref|YP_001259097.1| hypothetical protein BOV_1136 [Brucella ovis ATCC 25840]
gi|148371500|gb|ABQ61479.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 268
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 52 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 111
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K NT
Sbjct: 112 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKLRNT 171
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 172 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 219
>gi|312963224|ref|ZP_07777708.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
gi|311282490|gb|EFQ61087.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
Length = 253
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 24/157 (15%)
Query: 36 SVSAIVVLTGEPIRIE--------RAFELLENQIGEKI--------FISGV-HHSVSKDI 78
AIVVL R + L + ++ SG H+
Sbjct: 79 RADAIVVLGSGRERGDPAWGADQPTGIGLERQRYAARLAKASGLPVLTSGGLHYGTPPSE 138
Query: 79 LLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
QD + ++ T NA+ ++ V++VT +HM R
Sbjct: 139 AQLMAVSMQDDFGVTVRWKEERSRTTWENARMSAEILLPEGIKRVVVVTQAWHMSRAVWS 198
Query: 138 LQRINSTVQFIPYPI----ISHDLEENSSIFKIKILR 170
++ +P P+ + + + + K +
Sbjct: 199 FEKA--GFTVVPAPVGFLGVDNARPLGGWMPEFKSVW 233
>gi|325519750|gb|EGC99059.1| hypothetical protein B1M_38501 [Burkholderia sp. TJI49]
Length = 210
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 28/216 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEP 47
M L V +I ++ + M +PD P+ A++ VL
Sbjct: 1 MARTGRLLAVLACLWIGAAVALV--ASGMRMPDGPADLAVIFGNALDDNGAPKPVL---A 55
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ + +SG +++ ++ + + + I + NT
Sbjct: 56 ARLDVGVRCYHAGRCPTLLVSGAIDGPGLNEAAAMRDYLVARGVPAERIVVDELGDNTLA 115
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ A+ VLIV+ YH+ R L +R+ I +
Sbjct: 116 TAQHTLAYMRAQRLSSVLIVSQSYHLARARLAFERVG-----IARADLRAAYPRGFQWRD 170
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ E + +++L L+ F ++
Sbjct: 171 LYSSW---REVPAYAVYAVRLWLNPDARPVSFRPML 203
>gi|317506975|ref|ZP_07964744.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254733|gb|EFV14034.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 184
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 11/136 (8%)
Query: 33 DHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQD 88
A+VVL G P R L E + ++ IS G V + I +R
Sbjct: 39 PLRPADAVVVLGGAPYERFRYGIGLGERGLAPQVVISNSIGPDDPVMRQICAAPTHVR-- 96
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI-NSTVQF 147
C + + + +T G AQE A ++ +++VT H+ R ++R +Q
Sbjct: 97 -LTCFLPVPW---STRGEAQEIRRLAASRHWRSIIVVTTTAHIERARYIVRRCFAGDIQM 152
Query: 148 IPYPIISHDLEENSSI 163
YP E
Sbjct: 153 TDYPERRGAWESVYGW 168
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPI 85
+ + P AI++L G P R E E + ++++S GV + Q+ +
Sbjct: 38 STLALQQTPEPQAILMLGGNPNREEFTAEFAKKHDHLEVWVSSGVDRRT-ATEIFQQAGV 96
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NS 143
+ + Y+A++T N +K + HV ++T D+HM R + +
Sbjct: 97 DLG----RVHLDYRAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRAMAIASIVFGSQ 152
Query: 144 TVQFIPYPIISHDLEENS 161
+ F P PI + S
Sbjct: 153 GIAFTPVPIPTQGYPSES 170
>gi|113475490|ref|YP_721551.1| hypothetical protein Tery_1821 [Trichodesmium erythraeum IMS101]
gi|110166538|gb|ABG51078.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 191
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W+ L + +I + + P A++VL G R A E
Sbjct: 19 ISWFLLGLLATLWIS-----YQQISGTIKPPQ----ALLVLGGAIEREAFAAEFARQH-- 67
Query: 63 EKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ I SG + + + + +++ + + Y A++T N +
Sbjct: 68 PNLDIWVSSGSNP-----EYAEWLFSQAGISQTRLHLDYDAVDTVTNFTTTVDKLKSQGI 122
Query: 120 HHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
V +VT D HM R + ++ + + F P P+ S E
Sbjct: 123 TSVYLVTSDDHMRRAIVIGKIVLSSRGIAFKPLPVPSGRSPEP 165
>gi|254506071|ref|ZP_05118215.1| integral membrane protein [Vibrio parahaemolyticus 16]
gi|219550889|gb|EED27870.1| integral membrane protein [Vibrio parahaemolyticus 16]
Length = 268
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG +S ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRVMRIYPGSKLILSGYSGGSDISNARMMAKVALALGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E PYP ++ L ++
Sbjct: 165 WEEARQAAAFVK---HKKMVVVTSASHMKRALNEFHSAG----LKPYPAPTNYLAHDN 215
>gi|254254401|ref|ZP_04947718.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
gi|124899046|gb|EAY70889.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
Length = 204
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 32/211 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEPIRIERAF 54
L +I+ ++ Y +M P+ A++ VLT R++
Sbjct: 2 LAAVACIWIVAAVALAAYGMRMR--SEPADVAVIFGSALDDDGAPKPVLT---ARLDVGV 56
Query: 55 ELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ I +SG +++ ++ + + + I + + NT AQ A
Sbjct: 57 HCYRSGRCPVILVSGGIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLA 116
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEENSSIFKIKILR 170
+ + VLIV+ YH+ R L +R+ + ++ YP + SS ++
Sbjct: 117 YMRAHRMSRVLIVSQYYHLARARLAFERVGIEPSNIYVAYPRAFQLRDVYSSWREVPA-- 174
Query: 171 VLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ +++L L F ++
Sbjct: 175 --------YAVYAVRLWLDPDARPMSFRPML 197
>gi|307261514|ref|ZP_07543183.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868797|gb|EFN00605.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 246
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEK 64
+ + + G + F + V AIVVL G R L E +
Sbjct: 15 LVVILFLNGASGTLLFA----RAQADPLAKVDAIVVL-GGEHDGREAYGVGLAEQGYADT 69
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL---NTEGNAQEASAWAEKNNFHH 121
+ +S +H ++ + R D+ C KA T G A A A AE +++
Sbjct: 70 VLLSNPYHGTD-AVMAEACQPRSDIEVIC-----KAPVPGTTRGEALMARALAEARDWNS 123
Query: 122 VLIVTHDYHMPRT 134
+++V+ YH+PR
Sbjct: 124 IIVVSWRYHLPRA 136
>gi|312881496|ref|ZP_07741288.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370862|gb|EFP98322.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 254
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 93 GLMRLAEGIRILRMYPGSKLILSGYAAGSDVSNARMMAKVALALGVAKPDIILLETAKDT 152
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ N ++++VT +M R E PYP ++ L + +
Sbjct: 153 WEEARQAAAFV---NNKNLIVVTSASNMKRALNEFYSAG----LKPYPAPTNYLAQKN 203
>gi|293611000|ref|ZP_06693299.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826652|gb|EFF85018.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 261
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 23/198 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFSFIKENKDTSNNIPPVKAIIVLGSGVENGQPSTILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L L+ Q + + G+ S + + + + + +A + + K+ +TE
Sbjct: 125 RLDTAAALALKQQQAQIVLTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-DLEEN 160
N + + E+++ + IVT D+H+PR + + +Q + N
Sbjct: 185 LNLKNSKPLLEQHHITLDQPIAIVTSDFHIPRAIA-IAKKQGYIQVYGVAAETPLATRYN 243
Query: 161 SSIFKI--KILRVLLIEY 176
+ + + LL EY
Sbjct: 244 AWLREYFAYASGWLLNEY 261
>gi|269792163|ref|YP_003317067.1| hypothetical protein Taci_0549 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099798|gb|ACZ18785.1| protein of unknown function DUF218 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 262
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 33 DHPSVSAIVVLTGEPIRIE-----------RAFELLENQIGEK-----IFISGVHH---- 72
P+ ++VL G +R + + +L+ + I G +
Sbjct: 76 PLPTDDGVIVLLGGGVRYDRDLKPYQLGNYTSVRVLKALQLHRDTGWPIVCCGGNPRLDP 135
Query: 73 --SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S+ L+ + + + + ++ T N A + N +V+IVT +H
Sbjct: 136 DPEASEANLMAQTLMDMGATQ--VYREGRSRTTWENLVNALPILRRLNRRNVVIVTSSFH 193
Query: 131 MPRTFLELQRINSTVQFIPY 150
MPR + + + P+
Sbjct: 194 MPRAIMTARAVLKGFDVYPH 213
>gi|59802238|ref|YP_208950.1| hypothetical protein NGO1925 [Neisseria gonorrhoeae FA 1090]
gi|161869022|ref|YP_001598188.1| periplasmic protein [Neisseria meningitidis 053442]
gi|194099817|ref|YP_002002952.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|239999990|ref|ZP_04719914.1| Periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|240013062|ref|ZP_04719975.1| Periplasmic protein [Neisseria gonorrhoeae DGI18]
gi|240017631|ref|ZP_04724171.1| Periplasmic protein [Neisseria gonorrhoeae FA6140]
gi|240081888|ref|ZP_04726431.1| Periplasmic protein [Neisseria gonorrhoeae FA19]
gi|240114167|ref|ZP_04728657.1| Periplasmic protein [Neisseria gonorrhoeae MS11]
gi|240116805|ref|ZP_04730867.1| Periplasmic protein [Neisseria gonorrhoeae PID18]
gi|240119033|ref|ZP_04733095.1| Periplasmic protein [Neisseria gonorrhoeae PID1]
gi|240122252|ref|ZP_04735214.1| Periplasmic protein [Neisseria gonorrhoeae PID24-1]
gi|240122429|ref|ZP_04735385.1| Periplasmic protein [Neisseria gonorrhoeae PID332]
gi|240126722|ref|ZP_04739608.1| Periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|240127142|ref|ZP_04739803.1| Periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493442|ref|ZP_05106613.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|260441598|ref|ZP_05795414.1| Periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|268595796|ref|ZP_06129963.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268597985|ref|ZP_06132152.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268600240|ref|ZP_06134407.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268602480|ref|ZP_06136647.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268604748|ref|ZP_06138915.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268681017|ref|ZP_06147879.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268685301|ref|ZP_06152163.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268685499|ref|ZP_06152361.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044968|ref|ZP_06570677.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|293398039|ref|ZP_06642245.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296313265|ref|ZP_06863206.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|59719133|gb|AAW90538.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|161594575|gb|ABX72235.1| periplasmic protein [Neisseria meningitidis 053442]
gi|193935107|gb|ACF30931.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|226512482|gb|EEH61827.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268549185|gb|EEZ44603.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268551773|gb|EEZ46792.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268584371|gb|EEZ49047.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268586611|gb|EEZ51287.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268588879|gb|EEZ53555.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268621301|gb|EEZ53701.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268625585|gb|EEZ57985.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268625783|gb|EEZ58183.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011862|gb|EFE03858.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|291611985|gb|EFF41054.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296840237|gb|EFH24175.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|317165286|gb|ADV08827.1| hypothetical protein NGTW08_1872 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 218
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|46143765|ref|ZP_00134210.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208505|ref|YP_001053730.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae L20]
gi|303251036|ref|ZP_07337222.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307245941|ref|ZP_07528024.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307250279|ref|ZP_07532233.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252669|ref|ZP_07534561.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|126097297|gb|ABN74125.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650046|gb|EFL80216.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853160|gb|EFM85382.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306857720|gb|EFM89822.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859845|gb|EFM91866.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 246
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|262368832|ref|ZP_06062161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316510|gb|EEY97548.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 259
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 21/194 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
R+ W +F +F ++ F F+ + Q + P H + AIVVL R++
Sbjct: 68 RWAW-AIFFVWVFSLVIFFVFLGFSNQQNTP-HVAAPAIVVLGSGLKHGKPSPTLASRLD 125
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIR-QDLAECCIDIGYKALNTEGNA 107
+A + + +SG S+ +++ I + I ++ +TE N
Sbjct: 126 QAANYAKLHPNSIVVVSGGLSFQQKNSEAEAMRQYLIDVHHIPAQRIYTEDQSTSTELNL 185
Query: 108 QEASAWAEKNNF---HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ K + + IVT D+H+PR+ R + N+ +
Sbjct: 186 INSKKILAKQHISLQQPIAIVTSDFHIPRSRAIAIRQGYQTPIMISAQTPLATRYNAWLR 245
Query: 165 KIKILRV--LLIEY 176
+ LL EY
Sbjct: 246 EYFAYWSGWLLNEY 259
>gi|306844040|ref|ZP_07476635.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
gi|306275795|gb|EFM57519.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
Length = 264
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIGAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKIIVSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|167757031|ref|ZP_02429158.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|237735899|ref|ZP_04566380.1| membrane associated protein [Mollicutes bacterium D7]
gi|167703206|gb|EDS17785.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|229381644|gb|EEO31735.1| membrane associated protein [Coprobacillus sp. D7]
Length = 190
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E L + + + +SG V + + ++ I + + I I ++ +T
Sbjct: 54 KSRVEMGVTLYKKDKIKFLILSGGAVKNEYQEAKIMASYAISLGVKKEDILIEGQSRSTY 113
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N + L+VT+ +H+ +
Sbjct: 114 HNLMYSRDIMQINGLKNALVVTNSWHLRKA 143
>gi|171910674|ref|ZP_02926144.1| hypothetical protein VspiD_05860 [Verrucomicrobium spinosum DSM
4136]
Length = 211
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 32/209 (15%)
Query: 2 RYFWYGL-FVCLIFFIMGFIS-----FIRYVKQMHIPDHP--SVSAIVVLTGEPI-RIER 52
R + + + ++ ++G +R + + D P AIVVL G R
Sbjct: 7 RLAFRLVKLILVVAVLLGVAWIFRESLLRTAARTWVVDDPVLKADAIVVLGGGRDWRPFT 66
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID-----------IGYKAL 101
A ++ + ++ S L + P ++ + +G
Sbjct: 67 AADMYLAGQSTVVLVT--QPEKSPSQNLLQQPSEAEINTTVLTKKGVPSTAIRPLGQNVT 124
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST------VQFIPYPIISH 155
+T A W + +LI T +H R QR V+ IP+P S
Sbjct: 125 STRDEALALRDWVIAHQAKDILIPTDPFHTRRARWIFQRALEGTGATVHVRAIPHPRYS- 183
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSI 184
E E K L +
Sbjct: 184 ---ETDWWRHEDGFIAFQTELAKSLYYLL 209
>gi|119512189|ref|ZP_01631279.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
gi|119463155|gb|EAW44102.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
Length = 175
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 9/151 (5%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIP 84
Q + A++VL G +ER I+ISG + + K
Sbjct: 14 QESKIEELPPQAVLVLGGSTSHLEREKFTANFARQHPSLPIWISGGSPPTFTEKVFAKAG 73
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRIN 142
+ + Y+A++T N + V ++T ++HM R + E+ +
Sbjct: 74 VDPKRLR----LDYEAVDTVTNFTTLVDELQAQGIKSVYLITSEFHMRRARVIGEIVLGS 129
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+Q P + S ++ E R L+
Sbjct: 130 RGIQLKPVAVPSENMREPVDKSIRDGARALI 160
>gi|319783692|ref|YP_004143168.1| hypothetical protein Mesci_4004 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169580|gb|ADV13118.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 263
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 47/222 (21%)
Query: 8 LFVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGEPIRIERAFELLENQI---- 61
L + L + + +++ P V IVVL G E A L
Sbjct: 47 LILALSAWTSLGAMMLNPLEERFQRPPLPEKVDGIVVLGGGF---EGAINLARGGYELNS 103
Query: 62 -----------GEK--------------IFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
+ +F+ G + + LL + + D +
Sbjct: 104 SGDRMVETAILARRFPTAKVVVSGGTGALFLDGEGDAATAPRLLTALGVAADRM----IL 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII--- 153
K+ NT NA L+VT +HMPR + +P+P+
Sbjct: 160 ENKSRNTYENAVFTKELVTPKPGETWLLVTSAFHMPRAKALFDKA--GFATVPWPVDYRT 217
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
L ++ ++ + + E++ + + +
Sbjct: 218 SGREGVGLFRDNPADSLQATTMAIREWIGLFAYWLSGRIDQP 259
>gi|17547179|ref|NP_520581.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17429481|emb|CAD16167.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 185
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
IVVL GE R+ A EL + ++F+SG ++++++ + AE
Sbjct: 39 RADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSG---EGDCLLIVRRLEMAGVPAER-- 93
Query: 95 DIGYK--ALNTEGNAQEASA-WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
IG++ + +T NA+ A + ++VT YH R +R+ V +
Sbjct: 94 -IGHECESGSTMENARMTRRTLAGQPPVRSAVLVTSWYHTGRALHVFRRVWPEVAWGARG 152
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ D S +L EY+K +++
Sbjct: 153 VFPGDTLAKSFPIYESGS--ILAEYIKRAWYAVR 184
>gi|330984301|gb|EGH82404.1| hypothetical protein PLA107_04649 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 244
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 41 VVLTGEPIRIERAFELLENQI---GEKIFISGV---HHSVSKDILL--QKIPIRQDLAEC 92
VV T R+ +A E+ + + ISG ++++ + + + DL
Sbjct: 80 VVPTYALPRLLKAIEVYRDCQTVSQCTLLISGGPTGETTLTEAEVYQDRILHSAPDL-AG 138
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQFIPYP 151
I++ K+ NT NA+ +S+WA+ + + +VT HM R+ + T
Sbjct: 139 HIELEAKSRNTWENARFSSSWAKAHGYGQARLVTSLLHMRRSQSYFAHFDFPTSPEYSEQ 198
Query: 152 IISHDLEENSSIFKIKILRVLLIE 175
++ S+ + ++ VL+ E
Sbjct: 199 VVGPTSWLPSAW-NLAMVEVLIHE 221
>gi|302185148|ref|ZP_07261821.1| hypothetical protein Psyrps6_02354 [Pseudomonas syringae pv.
syringae 642]
Length = 256
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVVVEFAARKLEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|190150356|ref|YP_001968881.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307254915|ref|ZP_07536737.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259356|ref|ZP_07541083.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263699|ref|ZP_07545307.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915487|gb|ACE61739.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306862156|gb|EFM94128.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866592|gb|EFM98453.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870953|gb|EFN02689.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|315646581|ref|ZP_07899699.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
gi|315278224|gb|EFU41544.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
Length = 217
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
G R+E+A + +SG ++ ++ ++ + + E I + +A
Sbjct: 74 GLRERLEQALVEYNAGRFDTFIVSGGLDKPGYTYTEAEGMRNFLVEAGVPEERIYLENEA 133
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIP---YPIIS 154
+T N + E N + +I+THDYH R+ L + ++ P++
Sbjct: 134 TSTYENLLYSQDIMENNGWKTAIIITHDYHGTRSMEVATTLGYDHPSMSLTESTVLPMVK 193
Query: 155 HDLEENSSIFKIKILRVLL 173
H E + K R+L+
Sbjct: 194 HKSREVLAYTKWTADRLLI 212
>gi|266620475|ref|ZP_06113410.1| putative SanA protein [Clostridium hathewayi DSM 13479]
gi|288867927|gb|EFD00226.1| putative SanA protein [Clostridium hathewayi DSM 13479]
Length = 249
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 20/133 (15%)
Query: 37 VSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKI 83
I+VL R+ R EL E EK+ +SG H + D + +++
Sbjct: 76 ADCILVLGAGVHPDGKPSNMLEDRLLRGIELYEAGASEKLLMSGDHGRKNYDEVNAMKQF 135
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + + + + + +T + A E ++IVT YH+ R
Sbjct: 136 AVDRGVPSEDVFMDHAGFSTYESMYRARDVFEAEK---IIIVTQQYHLYRAL----YAAK 188
Query: 144 TVQFIPYPIISHD 156
+ Y + S
Sbjct: 189 QLGLDAYGVASDQ 201
>gi|303253664|ref|ZP_07339802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248075|ref|ZP_07530104.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302647584|gb|EFL77802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855473|gb|EFM87647.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 246
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVSTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|148240589|ref|YP_001225976.1| hypothetical protein SynWH7803_2253 [Synechococcus sp. WH 7803]
gi|147849128|emb|CAK24679.1| Uncharacterized conserved secreted protein [Synechococcus sp. WH
7803]
Length = 195
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 9/147 (6%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPIRIERAFELLENQIGEKIFI 67
L+ ++G + ++ I+VL G+ R L ++ + +
Sbjct: 8 FLLVSALIGGAAMATPLRPFAKAALTRQDPQRILVLGGDAERERIGLRL-ARRLALPLVV 66
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + + + + L + + Y+A +T GN + HVL+VT
Sbjct: 67 SGG----TNPEYARWLMEHEGLGTNEVRLDYRAQDTLGNFTSLVDELQAEGVEHVLLVTS 122
Query: 128 DYHMPRTFLE--LQRINSTVQFIPYPI 152
+ H+PR L + + ++ P+
Sbjct: 123 EDHLPRALLVGGVVAGSRGIRLTGVPV 149
>gi|253577135|ref|ZP_04854456.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843517|gb|EES71544.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 76/211 (36%), Gaps = 34/211 (16%)
Query: 2 RYFWYGLFVCL--IFFIMGFISFIRYVKQMHIPDHPSVS----AIV---VLTGE------ 46
R F +GL V I +++ ++ I +++ + IV L G+
Sbjct: 26 RIFRWGLVVISLGIGWMLYVLAQIGSIERNPAANSDLSDPAEVGIVLGAALWGDEPSPGL 85
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVS----KDILLQKIPIRQDLAECCIDIGYKALN 102
R++++ + + + ++G + + + + + + + + KA +
Sbjct: 86 RERLDQSLKDYKAGKFQWFLLTGGLDTATSQYTEAEGMANYLEQHGVPREKMLLENKATS 145
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN----STVQFIPYPIISHDLE 158
T N + + ++ F VLIVTH +H R E+ + + ++
Sbjct: 146 TYENLKFSQEILKERGFTSVLIVTHTFHGNRA-YEIAQALNYEQPRLSLTSSKVLKPL-- 202
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
R +L Y K L + L++
Sbjct: 203 -------PNTFREILA-YTKWKLDQLGLAIG 225
>gi|84388504|ref|ZP_00991051.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
gi|84377053|gb|EAP93924.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
Length = 284
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNARMMAKVALALGVAKPDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 165 WEEARQAAAFVKN---KRMVLVTSASHMTRALNEFHAAGMKPLPAPTNYLAQEGIVEPWN 221
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEIT 205
+ ++ E + ++ S++ L T + ++ E +
Sbjct: 222 KYMPKALYLEQTERYWHETMGLMWQSLRDWLDTSNDTVEEPIVVPETS 269
>gi|332710355|ref|ZP_08430303.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
gi|332350904|gb|EGJ30496.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
Length = 208
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R V ++ + FI + + P+ I+ L G+ R + E +
Sbjct: 24 LRKMRVVFTVTILLIALSFIPIRLGLAHLQ---SPTPEVILTLGGDITREKFTAEFAQQH 80
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S + + ++ I + + I +A++T N + ++ H
Sbjct: 81 PNLDIWVSSGQPTPQAQKVFREAGIP----DQQVHIDRRAIDTVTNFTSLVQDFQTHDIH 136
Query: 121 HVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIF 164
HV ++T D+HM R+ + + F P I S E S +
Sbjct: 137 HVYLITSDFHMRRSIAIAFFVFGSHGIAFTPVAIPSQR-PEESWLR 181
>gi|170288947|ref|YP_001739185.1| hypothetical protein TRQ2_1158 [Thermotoga sp. RQ2]
gi|170176450|gb|ACB09502.1| protein of unknown function DUF218 [Thermotoga sp. RQ2]
Length = 237
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L V F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAVTAYLFSSYVGEFLFLWSLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGVH----------------HSVSKDI-LLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + + +++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRPEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R + +V P
Sbjct: 151 RNTYENAFFTRE---KIGDVPIILVTDSIHMRRAVFTFKSFFQSVTPYP 196
>gi|149914159|ref|ZP_01902690.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
gi|149811678|gb|EDM71511.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
Length = 260
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 17/131 (12%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ A +V G R+ AF G ++ ++ + Q
Sbjct: 108 AERLTATLELARRFPDAKIVYAGGSGRVRDAF-------GAQL---------TEADIAQH 151
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ LA + + NT NA A A ++VT +HMPR +
Sbjct: 152 FLLNMGLAPERLLTDPTSRNTAENAARAMELATPEVGQTWVLVTSAFHMPRAIRSFEAAG 211
Query: 143 STVQFIPYPII 153
+ + +PYP+
Sbjct: 212 WS-ELVPYPVD 221
>gi|66047577|ref|YP_237418.1| hypothetical protein Psyr_4350 [Pseudomonas syringae pv. syringae
B728a]
gi|63258284|gb|AAY39380.1| Protein of unknown function DUF218 [Pseudomonas syringae pv.
syringae B728a]
Length = 256
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQIPPLPQQRWAMLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|228921749|ref|ZP_04085066.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953412|ref|ZP_04115458.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070559|ref|ZP_04203799.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|229080263|ref|ZP_04212790.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|229179370|ref|ZP_04306724.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|229191184|ref|ZP_04318173.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228592334|gb|EEK50164.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228604268|gb|EEK61735.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|228703158|gb|EEL55617.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|228712574|gb|EEL64509.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|228806309|gb|EEM52882.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837961|gb|EEM83285.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|206969158|ref|ZP_03230113.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736199|gb|EDZ53357.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 210
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|126654814|ref|ZP_01726348.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
gi|126623549|gb|EAZ94253.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
Length = 198
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 52/161 (32%), Gaps = 14/161 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
+ F+ L + + +G+ Y Q AI VL G R A +L
Sbjct: 22 KRFFPLLCLATLGLWLGYKQLQSYFAQPE--------AIFVLGGHEDRERFAAKLALEHP 73
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I++S + I D + Y+A +T N +
Sbjct: 74 NLPIWVSSGSPENYVTKIFTNAGISGDRLH----LDYQAKDTVTNFTTLVKELKDQGIDS 129
Query: 122 VLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
V ++T D HM R + E+ + P + S D E
Sbjct: 130 VYLITSDNHMNRARIIGEIVFGTQGITLKPLSVPSDDSPEP 170
>gi|59713611|ref|YP_206386.1| inner membrane protein [Vibrio fischeri ES114]
gi|197337496|ref|YP_002158026.1| integral membrane protein [Vibrio fischeri MJ11]
gi|59481859|gb|AAW87498.1| conserved inner membrane protein [Vibrio fischeri ES114]
gi|197314748|gb|ACH64197.1| integral membrane protein [Vibrio fischeri MJ11]
Length = 287
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG + +VS ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRIYRMYPGSKMILSGYNGGTTVSHARMMARVALSLGVQKSDILLLESARDTHEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + K +++VT HMPR E ++ P ++H +
Sbjct: 168 AIQTFNSVGK---STLVLVTSASHMPRAMSEFHQLGMDPVPAPTNYLAHSEVKQPWDKYA 224
Query: 167 KILRVL 172
+ L
Sbjct: 225 PKAKYL 230
>gi|323704444|ref|ZP_08116023.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536510|gb|EGB26282.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 194
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 23/148 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHI------PDHPSVSAIVVLTGE------------PIR 49
L + + ++ F+ + + ++ + AI++L R
Sbjct: 3 LLIKITASLITFVVLLNIIAELQVIIFAYNAKPVKSDAIIIL--GCAVYGKNPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L + +G+ I +SG VS+ ++ ++ + I K+ +T N
Sbjct: 61 LNEAIRLYKKGLGKYIIVSGGKGPGEDVSEAEAGKEYLLKNGIPYNTILKDDKSYSTLQN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + ++ + +IV++ +H+ R
Sbjct: 121 LENSKKIMDEKSLKTAIIVSNKFHLKRA 148
>gi|319936939|ref|ZP_08011349.1| exported protein [Coprobacillus sp. 29_1]
gi|319807875|gb|EFW04454.1| exported protein [Coprobacillus sp. 29_1]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 37 VSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIP 84
I+VL R+E A +L ++ KI +SG H + +++
Sbjct: 44 ADCILVLGAGVRNNKPTPMLNDRLEVAIQLYKDGKASKIIMSGDHGQEDYNEVGIMKTFA 103
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
I + I + + +T + A + V+IVT DYH+ R
Sbjct: 104 IENGVPSSAIFMDHAGFSTYESLYRAKEIFKAKK---VIIVTQDYHLYRALY 152
>gi|148652828|ref|YP_001279921.1| hypothetical protein PsycPRwf_1021 [Psychrobacter sp. PRwf-1]
gi|148571912|gb|ABQ93971.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 267
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 40/208 (19%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHP--SVSAIVVLTGE----------PI 48
R W L+ + +++ FI F + K + D P +V+AI+VL G
Sbjct: 71 RMVWKLLWAIFVLWLISFIVFAFSLHKNIKQVDQPYETVAAIIVLGGGIQDGLPTPTLAS 130
Query: 49 RIERAFELLENQIGEKIFISGV--------HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R++ A L++ Q + SG L I + + +
Sbjct: 131 RLDAAAPLIKEQPQAVVITSGGIGMGEIRSEGEAMARYLYALYGIPLEHIQQ----EKNS 186
Query: 101 LNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-D 156
+TE N + + + +VT D+H+PR+ + + +
Sbjct: 187 TSTEENFLFSQQILTEQGISLNDPIAVVTSDFHIPRSLAIAEHQG-YTNLVALASTTPLS 245
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSI 184
+ NS EY + +
Sbjct: 246 IRYNSW----------FREYFAYISGWL 263
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 12 LIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + GFI + + + + P AI+ L G P R E E + I++
Sbjct: 1 MFLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGGSPEREEFTAEFAKKHPHLDIWV 60
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + Q I + Y A++T N + N+ H+ ++T
Sbjct: 61 SSGIPPKQAQAIFQNANISNHRLH----LDYLAVDTVTNFTSLVDDFKHNHIQHIYLITS 116
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEEN 160
YH+PR L + + F P PI S E+
Sbjct: 117 AYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRES 151
>gi|229173740|ref|ZP_04301282.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
gi|228609839|gb|EEK67119.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTNDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|160902984|ref|YP_001568565.1| hypothetical protein Pmob_1541 [Petrotoga mobilis SJ95]
gi|160360628|gb|ABX32242.1| protein of unknown function DUF218 [Petrotoga mobilis SJ95]
Length = 214
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 40/209 (19%)
Query: 10 VCLIFFIMGFISFI----RYVKQMHIP-------DHPSVSAIVVLTGE------------ 46
VC++ +I F ++ + P D IVVL G
Sbjct: 2 VCIVIYIFSSGWFAKIIVLPLENRYPPVNVSQLDDTQEKGVIVVLGGGIIPETPREGSGE 61
Query: 47 -----PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ F LL + I ++G + + ++++ ++ + I +
Sbjct: 62 LSDSAMKRVYEGF-LLYKNLQIPIVVTGGKLLGTEIPEAQIMKEELLKMGVKPNDIYVEP 120
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
A NT+ NA+ E + + ++T H+PR + + +P P
Sbjct: 121 LAKNTKQNAEFTLTLLESDEVQKIYLITSAIHLPRAMNYFKSYT-NIDVVPVPTDYKISR 179
Query: 159 EN-SSIFKIKILRVL------LIEYLKIL 180
E + +R L EYL ++
Sbjct: 180 EELKWYDFLPDMRFLEATSSAWHEYLGLV 208
>gi|288921304|ref|ZP_06415586.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288347278|gb|EFC81573.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 225
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 12/154 (7%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPIRIERAFELLENQIGEKIFI 67
V L + F+ + + D P+ AIV+ G P R E+A L + +
Sbjct: 62 IVTLGVASLLFLGATVRLFVLPRRDDPAPVDAIVMFAGSPGRFEQAVSLARAGYAPTLAV 121
Query: 68 SGVHHSVSKDILLQKIPIRQDLAEC-CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S + + P + I L T+G ++ + A + + +++VT
Sbjct: 122 S---------VPTAEDPCPPPIPNVEVICFAPDPLTTQGESRWTADAAARYGWQSIIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
+ R L L+R S + P+ L
Sbjct: 173 STTQVTRARLRLERCYSGQILMS-PVPPPRLMWP 205
>gi|256061258|ref|ZP_05451408.1| hypothetical protein Bneo5_12948 [Brucella neotomae 5K33]
gi|261325265|ref|ZP_05964462.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301245|gb|EEY04742.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 264
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I++L G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIMLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|301061545|ref|ZP_07202307.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300444353|gb|EFK08356.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 183
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 34/182 (18%)
Query: 36 SVSAIVVL-TG--EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
A+VVL TG R+ A L K I+G K+ L+ Q C
Sbjct: 8 PSDAVVVLYTGVEYYPRLMEAASLYVKGSVGKAVING----NRKNDALR-WIETQGFKRC 62
Query: 93 C--------------------IDIGYK-ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
C + IG + A +T AQ + + +++ T +H
Sbjct: 63 CPWYEDKFRILGVLGVPREDIVHIGAEDAYDTVSEAQIVGDALIRKGYRTIILTTSKFHT 122
Query: 132 PRTFLELQRINST---VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
R + + VQ + P + + + +R +L EY + + L
Sbjct: 123 RRAAFIWKNMYKDRLSVQIV--PARTDPYDPAGWWKHGRQIRWVLAEYGAWVYYWWKHML 180
Query: 189 ST 190
+
Sbjct: 181 GS 182
>gi|187777765|ref|ZP_02994238.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
gi|187774693|gb|EDU38495.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
Length = 242
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 61/160 (38%), Gaps = 26/160 (16%)
Query: 15 FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE------------PIRIERAFELLE 58
+ FI F + ++ D P AI+VL G R+ +L +
Sbjct: 41 AAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCDMLEDRVAVGIDLYK 99
Query: 59 NQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
N +K+ SG H V+ D + ++K+ ++ + + I + + +T + A +
Sbjct: 100 NNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA 159
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++IVT YH+ R I + Y + S
Sbjct: 160 KK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 192
>gi|217969248|ref|YP_002354482.1| hypothetical protein Tmz1t_0817 [Thauera sp. MZ1T]
gi|217506575|gb|ACK53586.1| protein of unknown function DUF218 [Thauera sp. MZ1T]
Length = 259
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 35/179 (19%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISF-IRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+ + W G+ + L+ +G++ + Y + + AIVVL
Sbjct: 45 LAFAWAGVALNLLLIFPPSVGWLVARVEYPQMLDRARAREAQAIVVLGAGKRTHAPEFGG 104
Query: 48 --------IRIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAEC 92
R+ A L + +SG + L + + E
Sbjct: 105 ETVNRLALERLRYAAALARETRLP-VLVSGGAPAGDTPEAYLMEALLRDEYGVPPRWVE- 162
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ +T NA+ ++ + +L+VTH HM R E + V P
Sbjct: 163 -----SASRDTRENARFSAVHLQAAGVKRILLVTHAMHMERARPEFEAAGLDVIPAPTA 216
>gi|194334031|ref|YP_002015891.1| hypothetical protein Paes_1216 [Prosthecochloris aestuarii DSM 271]
gi|194311849|gb|ACF46244.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 196
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLEN 59
+ F+ + F+ + Y+ I+VL G+ R+ + EL
Sbjct: 9 LALLATSAFLTAMIFLG-----LGYIVSWPAASPEKADVIIVLGGDDGLRVSKGAELYHA 63
Query: 60 QIGEKIFISGVHHS-VSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ + ++G+ L ++ I + I + + +T A + K
Sbjct: 64 GFADDLLLTGLDSRYYRPGKLNWRERKLISLGIPGEAIHVDIVSTSTWEEAANTLSAMNK 123
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
N + L+++ HM R ++ S+ +F+ R +L
Sbjct: 124 NGWQRALVISDPPHMLRLQHTWTKVFTGSSKRFVLIATKPEWWHPLLWWNNETGSRFVLS 183
Query: 175 EYLKILLLSI 184
E K L ++
Sbjct: 184 EIKKNLYYAV 193
>gi|169628110|ref|YP_001701759.1| hypothetical protein MAB_1015c [Mycobacterium abscessus ATCC 19977]
gi|169240077|emb|CAM61105.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 204
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGEP-IRIERAFELLEN 59
R + + + + GFI+ V AIVVL G P R + +L +
Sbjct: 27 RRRILLVCITVTVLLAGFITAGWRVYMNPQTDPLRPADAIVVLGGTPYERFDVGLDLAKR 86
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLA----ECCIDIGYKALNTEGNAQEASAWAE 115
+ IS + + C I + TEG AQE + A+
Sbjct: 87 GYAPYLLIS----QSTGADDRNMDKYCKGHFTFTVSCFIPDPW---TTEGEAQEIRSKAQ 139
Query: 116 KNNFHHVLIVTHDYHMPRT 134
+ +HH++++T H+ R
Sbjct: 140 ELGWHHIIVITFTPHVSRA 158
>gi|167570139|ref|ZP_02363013.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 240
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 12/134 (8%)
Query: 38 SAIVVLTGEP-IRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDL 89
+ T + RI++ EL + + + +SG +++ + + + +
Sbjct: 79 DGVAAPTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEADTYARYLLARGV 138
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
A + ++ T NA+ +A ++ +++VT Y M R L+ R P
Sbjct: 139 ANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLDFARFG----IAP 194
Query: 150 YPIISHDLEENSSI 163
P+ ++
Sbjct: 195 QPVYANRRVAQLGW 208
>gi|209551623|ref|YP_002283540.1| hypothetical protein Rleg2_4052 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537379|gb|ACI57314.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 262
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 26/145 (17%)
Query: 30 HIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHH 72
D S+ ++VL G R A L + +I +SG
Sbjct: 71 PAADPDSLQCMIVLGGGFENEVNTARHGIEFNAAADRFVEALRLAQKFPQSRILVSGGDG 130
Query: 73 SVS------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S+S + P+ + I+ ++ T NA + + L++T
Sbjct: 131 SLSGIYEGDAAASERFFPLFGVGKDRLIE-ERQSRTTFENAVNTKEFLASQGLANCLLIT 189
Query: 127 HDYHMPRTFLELQRINSTVQFIPYP 151
+HMPR+ +++ + +P+P
Sbjct: 190 SGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|312622108|ref|YP_004023721.1| hypothetical protein Calkro_1031 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202575|gb|ADQ45902.1| protein of unknown function DUF218 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 195
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLT----GE------PIR 49
MR F L L+ I+ F + I P I+VL G+ R
Sbjct: 1 MRRFLKILLCTLVIVILIFAVTEASIIIFGISAKPKKSDCIIVLGCAVYGDFPSPFFRER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ RAFEL + I + G ++S+ ++ + + + K+ +T N
Sbjct: 61 LNRAFELYKKGYARYIVVCGAKGPGENISEAEAGKRYLVEMGVLPKFVLKEDKSFSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A K F +IV++ +H+ R
Sbjct: 121 LLHAKRVMNKKGFKSAIIVSNMFHLERA 148
>gi|218898164|ref|YP_002446575.1| hypothetical protein BCG9842_B2141 [Bacillus cereus G9842]
gi|218541554|gb|ACK93948.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIHTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|75764443|ref|ZP_00743940.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901618|ref|ZP_04065796.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
gi|228908852|ref|ZP_04072684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|74488069|gb|EAO51788.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228850862|gb|EEM95684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|228858030|gb|EEN02512.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
Length = 219
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIHTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|104783752|ref|YP_610250.1| hypothetical protein PSEEN4811 [Pseudomonas entomophila L48]
gi|95112739|emb|CAK17467.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 253
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 21/137 (15%)
Query: 35 PSVSAIVVLTGEPIRIERA---------FEL--------LENQIGEKIFISGV-HHSVSK 76
AIVVL R + A L L G + SG H+
Sbjct: 78 TKADAIVVLGAGRERGDPAWGGSDQPTYVALERMRFAAQLAKASGLPVLTSGGLHYGTPP 137
Query: 77 DILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + +A T NA + + V++VT +HM R+
Sbjct: 138 SEAQLMADRLEADFGVRVTWKEEASRTTWENADFTAKLLQPLGIRRVVVVTQAWHMQRSR 197
Query: 136 LELQRINSTVQFIPYPI 152
+R + +P P+
Sbjct: 198 WSFERA--GFEVVPAPV 212
>gi|307245325|ref|ZP_07527413.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254278|ref|ZP_07536118.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258738|ref|ZP_07540470.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853666|gb|EFM85883.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862757|gb|EFM94711.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867089|gb|EFM98945.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 252
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYTIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++ +
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|229030771|ref|ZP_04186797.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
gi|228730533|gb|EEL81487.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
Length = 219
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTNDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + + I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKDEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|283458819|ref|YP_003363461.1| hypothetical protein RMDY18_18090 [Rothia mucilaginosa DY-18]
gi|283134876|dbj|BAI65641.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18]
Length = 385
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 22/152 (14%)
Query: 3 YFWYGLFVC-LIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
YF++ L + + +GF ++ + +VVL RI
Sbjct: 165 YFYFSLVLTYFTIYAVGFTVAAALNLVNFR----QQADYVVVLGSGLIGDQVTPLLAGRI 220
Query: 51 ERAFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+R E+ G K+ +S G V + + + + + + + E I + +A+NT N
Sbjct: 221 DRGIEIYRKNPGSKLIMSGGQGADEEVPEGVAMTRYAVSRGIPEADIIVEDRAVNTRENL 280
Query: 108 QEASAW---AEKNNFHHVLIVTHDYHMPRTFL 136
+ A + V +VT YH+ R L
Sbjct: 281 LFSYALMPEVAEGKTPKVAVVTTSYHLFRALL 312
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ ++ G K+ +SG +S +L K+ + +A+ I + A +T
Sbjct: 108 RLSEGIRVMRMYPGAKLILSGYAGGSEMSHARMLAKVALALGVAKSDIILLETAQDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HMPR E Q + IP P
Sbjct: 168 ARQAAAFVQQ---RTLVLVTSASHMPRAMNEFQSA--GLTPIPAP 207
>gi|332662639|ref|YP_004445427.1| hypothetical protein Halhy_0646 [Haliscomenobacter hydrossis DSM
1100]
gi|332331453|gb|AEE48554.1| protein of unknown function DUF218 [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 54/148 (36%), Gaps = 10/148 (6%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV-SKDILLQKIPIR----QDLAECCIDIGYKALN 102
R+ + EL + I ++G ++ +K L ++ + + + + +A N
Sbjct: 101 NRLTQTLELYQQGKIRNILLTGGSSNIITKGQLEAQVVVDFIEDMGIPRTAVIVESQARN 160
Query: 103 TEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA ++ + +++T HM R ++ +++ L +
Sbjct: 161 TWENALNSTQIIQAKYPKASCVLITSATHMRRARACFRKAGLDIEYYCTDYRRTKLGGWA 220
Query: 162 SIFKIKI----LRVLLIEYLKILLLSIQ 185
+ L E+ +L+ +++
Sbjct: 221 WLKFEPGVIGDWEGLFKEWAGMLVYAMK 248
>gi|324327048|gb|ADY22308.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|165975946|ref|YP_001651539.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250279|ref|ZP_07336479.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252044|ref|ZP_07533944.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876047|gb|ABY69095.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650895|gb|EFL81051.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860513|gb|EFM92526.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 252
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYTIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++ +
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|325197310|gb|ADY92766.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 218
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F ++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|317968099|ref|ZP_07969489.1| hypothetical protein SCB02_01051 [Synechococcus sp. CB0205]
Length = 213
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C + + + F P P ++VL G+ R E+ + G + +SG
Sbjct: 35 CAVAWSSRGLVF---------PALPPPQLVLVLGGDVERERVGAEV-AKRDGLPVMVSGG 84
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S + + L + + + Y+A +T N +++ HV++VT H
Sbjct: 85 ----SNPEYAHWLFRGRGLDDTRVLLDYRATDTLSNFTSVVDDLKRSKIRHVVLVTSSDH 140
Query: 131 MPRTFLELQRI--NSTVQFIPYPII--------------SHDLEENSSIFKIKILRVLLI 174
M R + + + + + P + L + + LR
Sbjct: 141 MDRALMVGRVVAGSRGIGLTPLAVPCGERCVPEDWRKVWGDGLRAALWVVSGRDLRDWAA 200
Query: 175 EYLKILLLSIQ 185
E LL ++
Sbjct: 201 ERFGPLLEEVR 211
>gi|167562950|ref|ZP_02355866.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 240
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 54/146 (36%), Gaps = 13/146 (8%)
Query: 38 SAIVVLTGEP-IRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDL 89
+ T + RI++ EL + + + +SG +++ + + + +
Sbjct: 79 DGVAAPTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEADTYARYLLARGV 138
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
A + ++ T NA+ +A ++ +++VT Y M R L+ R P
Sbjct: 139 ANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLDFARFG----IAP 194
Query: 150 YPIISHDLEENSSIFKIKILRVLLIE 175
P+ ++ + ++ E
Sbjct: 195 QPVYANRRVAQFGWL-PRTGNLVNAE 219
>gi|165976456|ref|YP_001652049.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307257077|ref|ZP_07538852.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|165876557|gb|ABY69605.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306864448|gb|EFM96356.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 246
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ + D+ AIVVL G R+ A L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIVVGNQALERMRYA-AYLQKETQLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ + + + KA T+ NAQ + K + ++
Sbjct: 127 SSPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKII 180
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + ++
Sbjct: 181 LVTNQWHMKRAKMLFEK 197
>gi|229167811|ref|ZP_04295543.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
gi|228615627|gb|EEK72720.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEEELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|229060751|ref|ZP_04198106.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
gi|228718398|gb|EEL70030.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|86749502|ref|YP_485998.1| hypothetical protein RPB_2382 [Rhodopseudomonas palustris HaA2]
gi|86572530|gb|ABD07087.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 264
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 35/187 (18%)
Query: 35 PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-------- 69
+ I+VL G R+ A EL + +I SG
Sbjct: 77 RAPDGIIVLGGAIDSEVSAARDAVELDSSAERVMAALELARDYPQARIVYSGGSGNLIQN 136
Query: 70 -VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L + + D + ++ T NA L+VT
Sbjct: 137 SVAEAPIAADLFARFGVAPDRF----VVESRSRTTAENASFTRELVSPKPGEVWLLVTSA 192
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-----IKILRVLLIEYLKILLLS 183
+HMPR+ + V P + + + F + V E+ +L
Sbjct: 193 FHMPRSITAFRAAGFDVTAAPVDWRTRGWGDAARPFDRLSSGLARTDVAAHEWAGLLAYR 252
Query: 184 IQLSLST 190
+ ++
Sbjct: 253 LSGRTTS 259
>gi|82701477|ref|YP_411043.1| hypothetical protein Nmul_A0343 [Nitrosospira multiformis ATCC
25196]
gi|82409542|gb|ABB73651.1| Protein of unknown function DUF218 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKI 65
+ P ++ AI+VL G R+ A ++ G+ I
Sbjct: 63 VLETPSEKNPFDDTIQAIIVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRL-TGKPI 121
Query: 66 FISGVHH-SVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHHVL 123
+G +Q + ++ ++ + + NT NA ++ A +K +
Sbjct: 122 LTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSNTRENAYKSFAILQKQGIRQIA 181
Query: 124 IVTHDYHMPRTFLELQRINSTVQ 146
+VTH +HMPR E ++ V
Sbjct: 182 LVTHAWHMPRAAREFEQAGFEVT 204
>gi|212694703|ref|ZP_03302831.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
gi|212662682|gb|EEB23256.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
Length = 252
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 14/157 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL---------LQKIPIRQDLAECCIDIG 97
R+ L ++ K+ ++ + +++ + + +
Sbjct: 95 ADRLLEGIRLYKHGCIRKLVLASDGSIIESKDGKGLQGNAADMKQYLADLGMPLEDVILE 154
Query: 98 YKALNTEGNAQEASAWA-EKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFI-PYP-I 152
+A NT NA L++T HM R+ +P I
Sbjct: 155 TRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNPDTYITDTFPEI 214
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
S + L E++ L ++ S
Sbjct: 215 KGEKTNFLPSWHVLASWPELTHEWVGYLYYRLRHKPS 251
>gi|325123318|gb|ADY82841.1| putative SanA protein [Acinetobacter calcoaceticus PHEA-2]
Length = 261
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFSFIKENKDTSNNIPPVKAIIVLGSGVENGQPSTILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L L+ Q + + G+ S + + + + + +A + + K+ +TE
Sbjct: 125 RLDTAAPLALKQQQAQIVLTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFL 136
N + + E+++ + IVT D+H+PR
Sbjct: 185 LNLKNSKPLLEQHHITLDQPIAIVTSDFHIPRAIA 219
>gi|148270249|ref|YP_001244709.1| hypothetical protein Tpet_1119 [Thermotoga petrophila RKU-1]
gi|281412552|ref|YP_003346631.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
gi|147735793|gb|ABQ47133.1| protein of unknown function DUF218 [Thermotoga petrophila RKU-1]
gi|281373655|gb|ADA67217.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
Length = 237
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L V F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAVTAYLFSSYVGEFLFLWSLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGVH----------------HSVSKDI-LLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + + +++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRPEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R + +V P
Sbjct: 151 RNTYENAFFTRE---KIGDVPIILVTDSIHMRRAVSTFKSFFQSVTPYP 196
>gi|51893168|ref|YP_075859.1| hypothetical protein STH2030 [Symbiobacterium thermophilum IAM
14863]
gi|51856857|dbj|BAD41015.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 225
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 18/149 (12%)
Query: 2 RYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PI 48
R+ L V + + F + + +VL
Sbjct: 13 RWLVRLLAVGTAAVLAINALVYFPGRSRIITADAARPAQVALVLGAGVYADGRPTPMLRD 72
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A L E K+ +SG H D + +++ + + + + + +T +
Sbjct: 73 RLETALALYEAGKARKLLLSGDHSRPDYDEVNAMRRYLQERGVPPEDLFLDHAGFDTYDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+A + V++VT +H+PR
Sbjct: 133 MYRAAAIFQ---VDDVIVVTQGFHLPRAL 158
>gi|294789429|ref|ZP_06754666.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294482642|gb|EFG30332.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 224
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEK 64
++ + Q P A+VVL G RI +L + +K
Sbjct: 23 VVFCAWQVYDYAQHEKPLPQKADAVVVL-GAAAWGNNPSPVLRERINYGIKLYQQHTVQK 81
Query: 65 IFISGVHHSV---SKDILLQKIPIRQ-DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ +G ++ + Q+ +++ ++ + I + ++ +T N ++
Sbjct: 82 MIFTGGTPKFGYPTEAEVAQRYAMQKFNVPQRDIILDTESSSTYENLTNTRTLMHNHHLD 141
Query: 121 HVLIVTHDYHM 131
V+IV+ H+
Sbjct: 142 SVIIVSDPDHL 152
>gi|225568744|ref|ZP_03777769.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
gi|225162243|gb|EEG74862.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
Length = 201
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E+ LL + + +SG S S + +++ ++ + I ++++T N
Sbjct: 67 RVEKGAGLLREGKVKALLLSGGAVSNSHVEAEVMRDHALKLGVPADVIYTEPRSVSTYHN 126
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + A +N ++VT+ +H+ +
Sbjct: 127 MKYSKALMSENGLKDCVVVTNGWHLRKA 154
>gi|325965245|ref|YP_004243151.1| hypothetical protein Asphe3_39290 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471332|gb|ADX75017.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 331
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 23/159 (14%)
Query: 6 YGLFVCLIFFIMGFISF------IRYVKQMHIPDHPSVSAIVVLTGE----------PIR 49
G+ + ++G+ F + +P +VVL R
Sbjct: 118 LGVLTGTMAVLVGYFGFVFASYLAYSLIYSSLPPRRRPEYVVVLGSGLAGNAVPPLLAAR 177
Query: 50 IERAFELLENQIGE--KIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
++ A L + G + I G ++ + + Q + I I KA T
Sbjct: 178 LDAAVSLYRGKHGGTIRALIPSGGRGADELTTEGAAMARYLQEQGIPAASILIEDKATTT 237
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + ++ + V +VT YH+ R + +R
Sbjct: 238 LENLVFSRNLMDRPD-RPVTVVTSSYHVFRAAMFTRRAG 275
>gi|148977536|ref|ZP_01814115.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
gi|145963187|gb|EDK28454.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
Length = 284
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNARMMAKVALALGVAKPDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 165 WEEARQAAAFVKN---KRMVLVTSASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWN 221
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEIT 205
+ ++ E + ++ S++ L T + ++ E +
Sbjct: 222 KYMPKAIYLEQTERYWHETMGLVWQSLRDWLDTSSDIAEEPIVVPEAS 269
>gi|145629203|ref|ZP_01785002.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145639142|ref|ZP_01794749.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|144978706|gb|EDJ88429.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145271704|gb|EDK11614.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|309750723|gb|ADO80707.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 247
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 66/208 (31%), Gaps = 41/208 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + D+ AIV+L G
Sbjct: 43 ISFTWLYIISTPFTGLLLTDNDDTPALTLDDYKQAQAIVILGGGSYPTKELYAETASGSP 102
Query: 48 --IRI--------ERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCIDI 96
R+ E +L I G+ + L Q + E
Sbjct: 103 QLERLRYAAFLQKETGLPVLTTGYS---LI-GISEGDLMAKELNQFFNVPTQWIEN---- 154
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH- 155
KA NTE NA K+N +++VT+ +HM R ++ V S
Sbjct: 155 --KARNTEENASFTKNILIKDNIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYSSK 212
Query: 156 -DLEENSSIFKIKILR---VLLIEYLKI 179
+L S I + L VLL E++
Sbjct: 213 GNLSAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|228959326|ref|ZP_04121021.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800396|gb|EEM47318.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 219
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFE 55
+ L +C + + ++ + + D A +VL+ RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVLSAASWNGKPSPVFKERINHAIS 84
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 85 LYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAKQ 144
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 145 VGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|68250305|ref|YP_249417.1| hypothetical protein NTHI2008 [Haemophilus influenzae 86-028NP]
gi|145633636|ref|ZP_01789363.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148825756|ref|YP_001290509.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229845236|ref|ZP_04465369.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
gi|229847322|ref|ZP_04467424.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|68058504|gb|AAX88757.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144985513|gb|EDJ92329.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148715916|gb|ABQ98126.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229809747|gb|EEP45471.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|229811831|gb|EEP47527.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
Length = 247
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ + F ++ + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSVPFTGLLLTNNDDSPALTLDEYKQAQAIVILGGGSYQTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|209964476|ref|YP_002297391.1| hypothetical protein RC1_1164 [Rhodospirillum centenum SW]
gi|209957942|gb|ACI98578.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 271
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 27/167 (16%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ A +V TG + + + + +
Sbjct: 106 AERLTEIPALARRYPDARIVFTGGSGLVFE-------------------QDLKEAPVARA 146
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
R + ++ NT NA + A L+VT HMPR+ +RI
Sbjct: 147 AWERMGFDTARVLFEQESRNTWENALLSRDLAHPVEGEAWLLVTSAMHMPRSVGIFRRIG 206
Query: 143 STVQFIPYPI---ISHDLEENSSIFKIKILRVL---LIEYLKILLLS 183
V +PYP+ + LR L L EY+ +++
Sbjct: 207 WNV--VPYPVDFHVPDRSLYRIGFDLTDGLRSLSYALHEYIGLVVYR 251
>gi|312793878|ref|YP_004026801.1| hypothetical protein Calkr_1698 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181018|gb|ADQ41188.1| protein of unknown function DUF218 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 34 HPSVSAIVVLT----GE------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
I+VL G+ R+ RAFEL + I + G ++S+
Sbjct: 35 PKKSDCIIVLGCAVYGDFPSPFFRERLNRAFELYKKGYARYIIVCGAKGPGENISEAEAG 94
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + + I K+ +T N + K F +IV++ +H+ R L ++
Sbjct: 95 KRYLVERGVLPELILKEDKSFSTYENLLYSKKIMNKKGFKSTIIVSNMFHLRRASLIAKK 154
Query: 141 INSTVQF 147
+ F
Sbjct: 155 LKMNASF 161
>gi|328950417|ref|YP_004367752.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450741|gb|AEB11642.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 190
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 36/188 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
MR W L FI + QM AIVVL G R
Sbjct: 1 MRKLWAALLCV-------FIWGLASAPQM-------ADAIVVL-GAAQYNGHPSPIFANR 45
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L I ++G S+ + + + + ++ +T N
Sbjct: 46 LNAALALYRQGYAPTILVTGGKQPGDRYSEGEVGCRYLEAAGVPRDALICETRSRSTWEN 105
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ A A VLIVT H+PR + QR+ + YP+ E +
Sbjct: 106 LKNARALL---GPARVLIVTDAPHLPRAMMLAQRL--NIDAGGYPVAGRFPLEYRW--RE 158
Query: 167 KILRVLLI 174
+LR+L
Sbjct: 159 AVLRLLTR 166
>gi|312877810|ref|ZP_07737760.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795436|gb|EFR11815.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 34 HPSVSAIVVLT----GE------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
I+VL G+ R+ RAFEL + I + G ++S+
Sbjct: 35 PKKSDCIIVLGCAVYGDFPSPFFRERLNRAFELYKKGYARYIIVCGAKGPGENISEAEAG 94
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + + I K+ +T N + K F +IV++ +H+ R L ++
Sbjct: 95 KRYLVERGVLPELILKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNMFHLRRASLIAKK 154
Query: 141 INSTVQF 147
+ F
Sbjct: 155 LKMNASF 161
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 31 IPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG---VHHSVSK 76
+VVL R ++A E L+ +F++G + V +
Sbjct: 81 PSGAQKSDFVVVLGSGLRYGTYLSPEGKRRSDKAIEYLKEYPHLNVFLTGGQGIDEKVPE 140
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRT 134
+++++ + + E I + K+ NT N + + + +H++L+VT D+HMPR
Sbjct: 141 SVIMKEYFLENGIDENRIFLEDKSTNTNENIKFYIDALKDTDMEYHNILLVTSDFHMPRA 200
>gi|34496963|ref|NP_901178.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34102819|gb|AAQ59183.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 254
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 34/190 (17%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP----------------IRIERAFELLENQIGEKIF 66
+ + D + AIVVL G R+ A L Q G+ +
Sbjct: 69 VERYPPIRPADLAAADAIVVLGGGKRPAPEFGGNAPSSDTLARLRYA-AYLARQSGKPVL 127
Query: 67 ISGVHH-------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++G V L IR E ++ T NA+ ++ +
Sbjct: 128 VTGGSPLGGEPEGKVMASALHDDYGIRARWVED------RSDTTLDNARLSAEMLKAAGA 181
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIE 175
+ +V+ +H+ R Q V P + ++ S + VLL E
Sbjct: 182 TRIALVSQGWHLGRAVPFFQSQGLQVSPAPTGFVRYEGPAFTRYLPSGKAMGDCHVLLRE 241
Query: 176 YLKILLLSIQ 185
Y+ +L ++
Sbjct: 242 YIGLLYYRLR 251
>gi|307256540|ref|ZP_07538321.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864950|gb|EFM96852.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 252
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I +G + D + + + TE NA + A ++
Sbjct: 124 LPILATGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|88807093|ref|ZP_01122605.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
gi|88788307|gb|EAR19462.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 11/170 (6%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVS--AIVVLTGEPIRIERAFELLENQIGEKIFI 67
LI ++ +F ++ + I+VL G+ R L Q+ + +
Sbjct: 8 FLLISSLVAGAAFATPLRPFAVAALTRQDPQKILVLGGDADRERIGLRL-ARQLELPLVV 66
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + Q + + L + + + Y+A +T GN + HVL+VT
Sbjct: 67 SGG----TNPEYAQWLMEHEGLGQNEVRLDYRAQDTLGNFTSLVDELQGEEIEHVLLVTS 122
Query: 128 DYHMPRTFLE--LQRINSTVQFIPYPIISHD--LEENSSIFKIKILRVLL 173
+ H+PR + + + ++ P+ + +E+ LR L
Sbjct: 123 EDHLPRALMVGGIVAGSRGIRLTGVPVSCAERCRKESLGKRWGDGLRALA 172
>gi|296137799|ref|YP_003645042.1| hypothetical protein Tpau_0049 [Tsukamurella paurometabola DSM
20162]
gi|296025933|gb|ADG76703.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 185
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
Query: 5 WYGLFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQ 60
W + ++F +G ++ + Y Q V A+VVL G R + +L +
Sbjct: 9 WSTAVLVVVF--LGAVAAVGYPVFGQAKQDPLERVDAVVVL-GGEHDGREQYGLQLAKEG 65
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ +S + D ++ + R+ + C T G A A +
Sbjct: 66 YAPTLVLS--NPYEPDDHVMAPLCDRRVDGIEVLCEVPDPS--TTRGEALFTERLARERG 121
Query: 119 FHHVLIVTHDYHMPRT 134
+ V++V+ YH+PR+
Sbjct: 122 WKKVIVVSWRYHLPRS 137
>gi|229018413|ref|ZP_04175281.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
gi|229024642|ref|ZP_04181087.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228736707|gb|EEL87257.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228742893|gb|EEL93025.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
Length = 210
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGMKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHIKIEAYASPTP 174
>gi|317052073|ref|YP_004113189.1| hypothetical protein Selin_1906 [Desulfurispirillum indicum S5]
gi|316947157|gb|ADU66633.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 249
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 38/161 (23%)
Query: 20 ISFIRYVKQMHIP---DHPSVSAIVVLTGEPI------------------RIERAFELLE 58
++Q P D AIV+L G R+ L
Sbjct: 55 AWLHSGLQQHPPPTGKDIRRAQAIVILGGGRDYGAPEFGAEDAPGNATWRRLAYGAHL-A 113
Query: 59 NQIGEKIFISG--VHHSVSKDI------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
Q G I +SG VH + + L + E + T NA+ +
Sbjct: 114 RQSGLPILVSGGRVHGELHSEAWLMDQALRHSFGLEAQWRE------EHSRTTRENARYS 167
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + H+L+VT +H+PR E +R ++ IP P
Sbjct: 168 APILQNADITHILLVTQAWHLPRALPEFRR--QGLEVIPAP 206
>gi|309390074|gb|ADO77954.1| protein of unknown function DUF218 [Halanaerobium praevalens DSM
2228]
Length = 253
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 35/166 (21%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-------------AIVVLTGEP------- 47
L F + F+ F+ + HP + IVVL G
Sbjct: 38 LIRLTAVFSLIFLIFLATAVGARVLVHPLENYAERNLVEVSQKYPIVVLGGGSNYYSAKK 97
Query: 48 --------IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY- 98
R+ + +EL + I+ GV ++ + + + + L + +D+ +
Sbjct: 98 TTPSTHSLQRLVKGYELHRSLKTPLIYSGGV--AIGQQNISEADAASEFLQDLGMDLEFY 155
Query: 99 ----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
KA T NA W +++ V + T YHM R+ +
Sbjct: 156 FSETKAQTTFENAAYLRKWIKQHQVKKVYLFTSAYHMLRSMTVFKA 201
>gi|254409533|ref|ZP_05023314.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183530|gb|EDX78513.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 206
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
P AI+ L G R + + + I++S S S +L I ++
Sbjct: 27 SPHPQAILTLGGGRDREKFTAQFAQTHPSLDIWVS----SGSPPDVLYAIFQNANIPIQR 82
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPYP 151
+ + Y+A++T N A ++ N H+ ++T DYH+PR L + ++ F P
Sbjct: 83 VHLDYRAVDTVTNFTSLVADFKRRNIQHIYLITSDYHIPRAKAIAILVLGSQSITFTPVA 142
Query: 152 IISHDLEENSSIFKIKILRVLL 173
+ S+ E+ +R LL
Sbjct: 143 VPSNQPPESWLRILRDSIRALL 164
>gi|3056882|gb|AAC14002.1| unknown [Actinosynnema pretiosum subsp. auranticum]
Length = 336
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 24/162 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV------SAIVVLTGE----------PI 48
W +F + G++ F + ++ + V +AIVVL
Sbjct: 123 WVLAAAGSLFLLAGYLGFAFTLFLLYSVLYGRVRKRTGHTAIVVLGAGVPGGRVTPLLAG 182
Query: 49 RIERAFELL----ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++RA +L + SG S+ ++ + + + + ++
Sbjct: 183 RLDRALKLYRRAAAKGASPLVVASGGQGPDEPASEAEVMANYLRERGIPDEALLEEREST 242
Query: 102 NTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRIN 142
+T N + +SA + +L+VT YH+PR + +R
Sbjct: 243 STWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAG 284
>gi|33152333|ref|NP_873686.1| hypothetical protein HD1239 [Haemophilus ducreyi 35000HP]
gi|33148556|gb|AAP96075.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 256
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 23/147 (15%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN-----------------QI 61
I + + +++ I ++ AIVVL G + + EL +
Sbjct: 67 LIQAVSFSEKLTIEEYRQAQAIVVLGGG---VRNSRELFADYAIAATPLERMRYAAYLHK 123
Query: 62 GEKI--FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN-TEGNAQEASAWAEKNN 118
++ ++G + + + + + A N TE NA A +K
Sbjct: 124 QTRLPVLVTGGSPTGKQPEANIMAQEFANFFDVQVKWIESASNITEENAHLTKAILDKEG 183
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTV 145
+++VT+++HM R + +R V
Sbjct: 184 ITKIILVTNEWHMKRAKMLFEREGFNV 210
>gi|17158752|ref|NP_478263.1| hypothetical protein all7616 [Nostoc sp. PCC 7120]
gi|17134701|dbj|BAB77259.1| all7616 [Nostoc sp. PCC 7120]
Length = 228
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 28/173 (16%)
Query: 1 MRYFWYGLFVCLIF---FIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGE---------- 46
+R+ GL + ++ +I + + + P +V
Sbjct: 19 LRWILLGLVISVLAKPLIATAYIGLMTNGDRYVQPESVPKEQVAIVFGAGILPNDNPTPM 78
Query: 47 -PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL--AECCIDIGYKALNT 103
R+E A +L + K+ ++G + +VS + + + DL I + Y +T
Sbjct: 79 LSDRVEAAVKLYKMGKISKLLMTGDNSTVSYNEVRSMLKYAHDLGVPMKNITLDYAGFST 138
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--------STVQFI 148
+ A + H +++T +YH+PRT +++ ++
Sbjct: 139 YESCYRAH---KVFGVHKAVVITQNYHLPRTVYTCRQLGLKTVGLGTPDIEIY 188
>gi|257454427|ref|ZP_05619689.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448193|gb|EEV23174.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 274
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 76/205 (37%), Gaps = 33/205 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVS-AIVVLTGEPI---------- 48
++ W +++ +++ F F+ Y+KQ + +HP + AI+VL G
Sbjct: 78 LKKLWQLVWLLFFVWLISFCIFVSYLKQHFNTDNHPKAAQAIIVLGGGTKDNKPTDAVKL 137
Query: 49 RIERAFELLENQIGEKIFIS--GVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNT 103
R+++A E++ + I+ G + + ++ I + ++ +T
Sbjct: 138 RLDKASEVIRR-FANALVITSGGFDAGEDVSEAKAMADYLHDTYGISLANISLEEQSTST 196
Query: 104 EGNAQEASAWAEKNNF---HHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
E N + + ++ VT D+H R + + ++ + +Q + +
Sbjct: 197 ELNFVHSKKILAQQGIALNQPIIAVTSDFHTLRASLIGKRQGYTNLQVVG--------SD 248
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
+ V EY + +
Sbjct: 249 TPWYIRPN---VWFREYFAFISGWL 270
>gi|87123615|ref|ZP_01079466.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
gi|86169335|gb|EAQ70591.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
Length = 214
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 21/151 (13%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
I+VL G+ R + +L G ++ + V S + R+ L++ + + Y+
Sbjct: 38 ILVLGGDVDREKAGLQL-----GRRLALPVVVSGGSNPEYAHWLMDREGLSQSRVRLDYR 92
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPI----- 152
A +T GN ++ H+L+VT H+PR L + ++ P+
Sbjct: 93 AKDTLGNFTSLVDDLKREGVQHMLLVTSRDHLPRAMAVGRLVAGSRGIRLTAVPVACAPR 152
Query: 153 ---------ISHDLEENSSIFKIKILRVLLI 174
+ L + + + L+
Sbjct: 153 CLEESLGKQVGDGLRALAWVLTGRDLKPWAR 183
>gi|108804095|ref|YP_644032.1| hypothetical protein Rxyl_1256 [Rubrobacter xylanophilus DSM 9941]
gi|108765338|gb|ABG04220.1| protein of unknown function DUF218 [Rubrobacter xylanophilus DSM
9941]
Length = 195
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 12/160 (7%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEP------IRIERAFELLENQIGEKIFI--SGVHHS 73
F + + + V VL G R A L ++ I GV
Sbjct: 21 FSGEMPRPGGAEVAVVLGSQVLPGGRPSGTLMARTLHAARLYRGGRV-RLLIPTGGVGRH 79
Query: 74 V-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
S+ ++ ++ + + + +AL+T +A+ S A VL+VT H
Sbjct: 80 PPSEAEIMARLLRGAGVPGRAVLLEDRALSTWDSARYVSRMARGLGVGRVLVVTDPLHCV 139
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
RT + ++ IP P+ S + + + R +
Sbjct: 140 RTVAAFRHA--GLEAIPEPVYSSPMWRVRWLRLGQFFREM 177
>gi|229012351|ref|ZP_04169528.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
gi|228748987|gb|EEL98835.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
Length = 210
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|163940818|ref|YP_001645702.1| hypothetical protein BcerKBAB4_2882 [Bacillus weihenstephanensis
KBAB4]
gi|229133982|ref|ZP_04262803.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
gi|163863015|gb|ABY44074.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
gi|228649475|gb|EEL05489.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
Length = 210
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|300312530|ref|YP_003776622.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075315|gb|ADJ64714.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 269
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 51/226 (22%)
Query: 2 RYFWYGLFVCLIFFI--------MGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIE 51
R+ +GL + ++ +G + I ++ + AIV+L RI+
Sbjct: 52 RWRRFGLLLIVLGVATLLVLSTRVGSLLLIAPLENSYPVLRSPGQAQAIVIL--GSGRID 109
Query: 52 RAFEL-------------------LENQIGEKIFISGVHHSVSKDI--------LLQKIP 84
RA E L Q G I ++G + S + L +
Sbjct: 110 RAPEYGGLDDANAIGMKRLQYGAYLHRQSGLPILVTGGNPDGSPESEAAVMARTLERDFA 169
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
+ E ++ T NA ++A ++ +L+VT HMPR
Sbjct: 170 VPVRWQEG------RSNTTYDNATLSAAMLKEAGISRILLVTDSLHMPRAMQVFATTGLQ 223
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRV-----LLIEYLKILLLSIQ 185
VQ P + + + + + L E++ L ++
Sbjct: 224 VQAAPT-VFAGQARTRVTDYLPNAASLQLASYALREWIGQLWYRVR 268
>gi|262404134|ref|ZP_06080689.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
gi|262349166|gb|EEY98304.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
Length = 283
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 108 RLAEGIRINRMYPGSKMILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A++A+A+ ++ +++VT HM R E + P + H I
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFEAAGLNPIPAPTNFLGHLNIAQPWDKYI 224
Query: 167 KILRVL------LIEYLKILLLSIQLSLSTQTASQFFITLIEEITV 206
R L E L +L ++ +++ + + E TV
Sbjct: 225 PKARYLEQTEQYWYETLGLLWQKLRDTVAGDVETPLANPAVIEETV 270
>gi|108763026|ref|YP_634765.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
gi|108466906|gb|ABF92091.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
Length = 292
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 16/153 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVL-----TGE------PIR 49
+ L V G V + +VVL G R
Sbjct: 90 ARLFRLLMVGAGVLTCGVFGLAWVVDRFGQREQAAPADVLVVLGARVLPGGVPSGALRAR 149
Query: 50 IERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
E A L + ++ SG V+ +L AE C+ + + +T+ N
Sbjct: 150 TEHAVALYHRGVAPRLVFSGGVGVNPPSEARAMLALATRMGVPAEACV-LEEGSHSTDDN 208
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
A+ + V++V+ YH+ R +
Sbjct: 209 ARLTAEVLRGLGARRVVVVSDPYHLLRARNYFR 241
>gi|260582799|ref|ZP_05850585.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
gi|260094125|gb|EEW78027.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
Length = 247
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 41/208 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + D+ AIV+L G
Sbjct: 43 ISFTWLYIISTPFTGLLLTDNDDTPALTLDDYKQAQAIVILGGGSYPTKELYAETASGSP 102
Query: 48 --IRI--------ERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCIDI 96
R+ E +L I G+ + L Q + E
Sbjct: 103 QLERLRYAAFLQKETGLPVLTTGYS---LI-GISEGDLMAKELNQFFNVPTQWIEN---- 154
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH- 155
KA NTE NA K++ +++VT+ +HM R ++ V
Sbjct: 155 --KARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSK 212
Query: 156 -DLEENSSIFKIKILR---VLLIEYLKI 179
+L S I + L VLL E++
Sbjct: 213 GNLSAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|119896762|ref|YP_931975.1| hypothetical protein azo0471 [Azoarcus sp. BH72]
gi|119669175|emb|CAL93088.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 283
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 53/188 (28%), Gaps = 45/188 (23%)
Query: 33 DHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGVHHSVS 75
AIV+L G R+ L G + +SG S
Sbjct: 103 AARGAQAIVILGGGRRSHAAEYGGDTVNRLTLERLRYGARLARA-TGLPLLVSGGAPSGD 161
Query: 76 KDI-------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
L + I E + +T NA+ ++A + V++VTH
Sbjct: 162 VPEATLMAAALREDFGIAPRWEEG------GSFDTRDNARLSAAMLRADGVTRVVLVTHA 215
Query: 129 YHMPRTFLELQRINSTVQFIPYPII-------SHDLEENSSIFKIKI-----LRVLLIEY 176
HM R E + +P P D ++ L E+
Sbjct: 216 AHMRRAEAEF--ALHGLAVVPAPTAWLGPGPERADDDDEVWPSLPSQGTAYAGWYALHEW 273
Query: 177 LKILLLSI 184
+ +L +
Sbjct: 274 MGLLAYRL 281
>gi|317489670|ref|ZP_07948174.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|316911264|gb|EFV32869.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
Length = 218
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 25/153 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPD---HPS------VSAIVVL------TGEPI-- 48
GL + + ++ + D P AIVVL G P
Sbjct: 5 LGLMLGCMLVVVAVFAATNVATIATTKDRIVEPQSAVGFDADAIVVLGASVFADGTPSGI 64
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNT 103
R++ L + + K+ +SG + +VS + +++ I Q + I + +T
Sbjct: 65 LRDRLDDGIALYKEGVAPKLIMSGDNSTVSYNEVQVMKDYAISQGVPSHDIFCDHAGFST 124
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++ T YH+ R
Sbjct: 125 YESMYRAKH---VFGAERIVVATQTYHLYRALY 154
>gi|298493004|ref|YP_003723181.1| hypothetical protein Aazo_4922 ['Nostoc azollae' 0708]
gi|298234922|gb|ADI66058.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 198
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 22/186 (11%)
Query: 1 MRYFWYGL----FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
M+ +Y L + L F + F+S I + P AI+ L G R + E
Sbjct: 1 MKRSYYLLKKYWILSLASFSLVFLSIIPIRIAIASYQAPHPQAILTLGGGQEREKFTAEF 60
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+N I+IS + + I + Y+A++T N K
Sbjct: 61 AQNHPNLHIWIS---SGILPAQAFAIFE-EVSIPTERIHLDYRAVDTVTNCTTLVHDFHK 116
Query: 117 NNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIP------------YPIISHDLEENSS 162
+ H+ ++T D+H+PR L + + F P +PI+
Sbjct: 117 YHIKHIYLITSDFHLPRAKTIATLVLGSQGITFTPISIPSERPRESIFPIVRDSGRSLLW 176
Query: 163 IFKIKI 168
I +
Sbjct: 177 IVSGRT 182
>gi|327398427|ref|YP_004339296.1| hypothetical protein Hipma_0260 [Hippea maritima DSM 10411]
gi|327181056|gb|AEA33237.1| protein of unknown function DUF218 [Hippea maritima DSM 10411]
Length = 258
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 25/161 (15%)
Query: 2 RYFWYGLFVCLIFFIM----GFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---RIER-- 52
R+ W+ + + + + G + Y++ + + SA+VVL+G RI+
Sbjct: 42 RFRWFFMVSAFVLWFISTTPGKNLLLSYLEDIKT-SSDTASAVVVLSGGSNPYDRIKTYP 100
Query: 53 -AFE------LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-----IDIGYKA 100
AF+ LL + + SG + + Q + +A+ C I K+
Sbjct: 101 EAFKRLMYGILLAKRYNIPLIFSGG--GLKYNDSAQAKNDIEIIAKICNCKIKIYFENKS 158
Query: 101 LNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQR 140
LNT NA+ S + EK + IVT YH R + +
Sbjct: 159 LNTYQNAKYTSKFFEKMKIKKDIFIVTSAYHQKRANILFRY 199
>gi|318042858|ref|ZP_07974814.1| hypothetical protein SCB01_14194 [Synechococcus sp. CB0101]
Length = 268
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 27/173 (15%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEPIRIE----RAFELLENQ-------------IGEKIF 66
+ P A+VVL G +R +A E+ E +
Sbjct: 67 EQAAALTPRQIPRADAVVVL-GGGLRPALAPRQAVEVAEGGDRLLTGLRLLRQNKAPVLL 125
Query: 67 ISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
SG + + + Q + I + I ++ T A++ A K +
Sbjct: 126 TSGGQVTFTAGDPAPPEALSAQALAIELGMPPERILTNPRSRTTAEEARDIGQLARKRGW 185
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
VL+VT +HMPR+ Q+ + ++ IP + L + K VL
Sbjct: 186 RTVLLVTSAFHMPRSLATFQQRS-GLRVIPVACD-YQLPTRARYGKPTAGSVL 236
>gi|118478405|ref|YP_895556.1| hypothetical protein BALH_2770 [Bacillus thuringiensis str. Al
Hakam]
gi|118417630|gb|ABK86049.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 225
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 31 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 89
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 90 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 149
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 150 QVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 189
>gi|30021189|ref|NP_832820.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30263055|ref|NP_845432.1| hypothetical protein BA_3106 [Bacillus anthracis str. Ames]
gi|47528398|ref|YP_019747.1| hypothetical protein GBAA_3106 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185896|ref|YP_029148.1| hypothetical protein BAS2890 [Bacillus anthracis str. Sterne]
gi|49479533|ref|YP_037182.1| hypothetical protein BT9727_2858 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165868915|ref|ZP_02213575.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167632539|ref|ZP_02390866.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167637429|ref|ZP_02395709.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170685113|ref|ZP_02876338.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170704915|ref|ZP_02895380.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650000|ref|ZP_02933001.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564854|ref|ZP_03017775.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196032544|ref|ZP_03099958.1| conserved hypothetical protein [Bacillus cereus W]
gi|196038177|ref|ZP_03105487.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196042737|ref|ZP_03109976.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218232485|ref|YP_002367802.1| hypothetical protein BCB4264_A3095 [Bacillus cereus B4264]
gi|218904226|ref|YP_002452060.1| hypothetical protein BCAH820_3110 [Bacillus cereus AH820]
gi|225865058|ref|YP_002750436.1| hypothetical protein BCA_3166 [Bacillus cereus 03BB102]
gi|227814096|ref|YP_002814105.1| hypothetical protein BAMEG_1503 [Bacillus anthracis str. CDC 684]
gi|229600823|ref|YP_002867325.1| hypothetical protein BAA_3156 [Bacillus anthracis str. A0248]
gi|254685645|ref|ZP_05149504.1| hypothetical protein BantC_17565 [Bacillus anthracis str.
CNEVA-9066]
gi|254723056|ref|ZP_05184844.1| hypothetical protein BantA1_11354 [Bacillus anthracis str. A1055]
gi|254738109|ref|ZP_05195812.1| hypothetical protein BantWNA_23369 [Bacillus anthracis str. Western
North America USA6153]
gi|254742718|ref|ZP_05200403.1| hypothetical protein BantKB_17177 [Bacillus anthracis str. Kruger
B]
gi|254752426|ref|ZP_05204462.1| hypothetical protein BantV_08161 [Bacillus anthracis str. Vollum]
gi|254760943|ref|ZP_05212967.1| hypothetical protein BantA9_21746 [Bacillus anthracis str.
Australia 94]
gi|296503616|ref|YP_003665316.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|300118019|ref|ZP_07055768.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|301054601|ref|YP_003792812.1| hypothetical protein BACI_c30540 [Bacillus anthracis CI]
gi|29896743|gb|AAP10021.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30257688|gb|AAP26918.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503546|gb|AAT32222.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179823|gb|AAT55199.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49331089|gb|AAT61735.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164715641|gb|EDR21158.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167514936|gb|EDR90302.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167532837|gb|EDR95473.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170129770|gb|EDS98632.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170671373|gb|EDT22111.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083952|gb|EDT69011.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564171|gb|EDV18135.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195995295|gb|EDX59249.1| conserved hypothetical protein [Bacillus cereus W]
gi|196026221|gb|EDX64889.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196031447|gb|EDX70044.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218160442|gb|ACK60434.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|218536393|gb|ACK88791.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786516|gb|ACO26733.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227003379|gb|ACP13122.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265231|gb|ACQ46868.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|296324668|gb|ADH07596.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|298724604|gb|EFI65297.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|300376770|gb|ADK05674.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 210
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|65320363|ref|ZP_00393322.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|228915677|ref|ZP_04079263.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928153|ref|ZP_04091197.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228934353|ref|ZP_04097192.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228946697|ref|ZP_04109005.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229046787|ref|ZP_04192429.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|229092098|ref|ZP_04223281.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|229110541|ref|ZP_04240111.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|229122649|ref|ZP_04251860.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|229128413|ref|ZP_04257394.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|229145685|ref|ZP_04274067.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|229151285|ref|ZP_04279491.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|229185305|ref|ZP_04312489.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228598225|gb|EEK55861.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228632285|gb|EEK88908.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|228637775|gb|EEK94223.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|228655272|gb|EEL11129.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|228660901|gb|EEL16530.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|228673025|gb|EEL28299.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|228691263|gb|EEL45026.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|228724550|gb|EEL75865.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|228812994|gb|EEM59307.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228825521|gb|EEM71315.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228831570|gb|EEM77163.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843963|gb|EEM89026.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 219
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|15602371|ref|NP_245443.1| hypothetical protein PM0506 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720766|gb|AAK02590.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 247
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 37/183 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
++ + D+ AIV+L G R+ A L+ Q + I+G
Sbjct: 68 DKLSLADYQQAQAIVLLGGGLRDSKELYDKLTVSAIPLERVRYA-AYLQKQTQLPLLITG 126
Query: 70 VHH-SVSKDILLQK-----IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+S+ ++ + E KA T+ NA + EK V+
Sbjct: 127 SSPKGISEAQIMANELNTFFSVPTTWVEG------KARTTKENALFSREILEKEGIKRVI 180
Query: 124 IVTHDYHMPRTFLELQRINSTVQF--IPYPIISHD--LEENSSIFKIKILR---VLLIEY 176
+VT+ +HM R L ++ V + + I L I + L +LL E+
Sbjct: 181 VVTNQWHMQRAKLLFEQQGFEVLPASVGHGISPQSYGLNVMYFIPQAGALNKNMLLLKEW 240
Query: 177 LKI 179
L
Sbjct: 241 LGY 243
>gi|261364338|ref|ZP_05977221.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288567599|gb|EFC89159.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 197
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 22/165 (13%)
Query: 7 GLFVCLIFFIMGFI-----SFIRYVKQMHIPDHPSVSAIVVLT-----GEP------IRI 50
+F+ ++FF + +V ++ A VVL+ G R+
Sbjct: 6 LVFILVLFFTAALLPLWIMWRDFWVSRLDADTVRPADAAVVLSTRAYEGGRLNPCLVARV 65
Query: 51 ERAFELLENQIGEKIFIS-GVHHSVSKDIL-LQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
E A EL + +K+ ++ GV + +Q I + +++ I +A NT N
Sbjct: 66 EAAVELYRARKVKKLVMTGGVSRDLQSSAGNMQMIAEKMGVSKADIIQEREAGNTFENIV 125
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYP 151
+ + E N V+IV+ +H+ R + Q +Q P
Sbjct: 126 FSRKFIE--NSPRVVIVSAGFHLARARMMADRQWQGHDIQVYAAP 168
>gi|223939730|ref|ZP_03631602.1| protein of unknown function DUF218 [bacterium Ellin514]
gi|223891601|gb|EEF58090.1| protein of unknown function DUF218 [bacterium Ellin514]
Length = 343
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGEPI-----RIERAFE 55
+CL+ F F + + VVL G P R+ A +
Sbjct: 159 LFLLCLLAFP-----FAQMLCFGKTDYRRPADVAVVLGARAYADGRPSDALADRVRTACQ 213
Query: 56 LLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L + + +K+ SG SV + + ++ ++ + I LNT+
Sbjct: 214 LYRDGLVKKLIFSGGPGDGSVHETESMTRMAVQLGVKPQDILTDRAGLNTQATVNNTERL 273
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+ N H+L+V+H YH+PR + +R V +P ++ L E + ++ + +
Sbjct: 274 FSQINARHILVVSHFYHLPRIKMAYRRDGWDVYTVP-ARETYLLRETPYMMAREVAAIWV 332
Query: 174 IEYLKILLL 182
YLK L+
Sbjct: 333 Y-YLKPLVS 340
>gi|329930832|ref|ZP_08284231.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
gi|328934534|gb|EGG31039.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
Length = 217
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 72/195 (36%), Gaps = 23/195 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVKQMHI--PDHPSVSAIVVLT---------GEPI 48
++ G++ L ++G + + + + P + I++ G
Sbjct: 18 AWYRRGIYTLLSLVVLGVFWSGYAYWKIESAVSRPAENADVGIILGASMWGDQPSPGLRE 77
Query: 49 RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E A + ++G ++ ++ ++ + + E I + +A +T
Sbjct: 78 RLEHALVEYNAGRFDTFIVTGGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEATSTY 137
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIP---YPIISHDLE 158
N + A E++ ++ +IVTHDYH R L ++ P+ H
Sbjct: 138 ENLLYSQAIMEEHGWNTAIIVTHDYHGTRAMEVATALGYDQPSMSLTESTVLPMAKHKSR 197
Query: 159 ENSSIFKIKILRVLL 173
E + K R+L+
Sbjct: 198 EVLAYTKWTADRLLI 212
>gi|300312046|ref|YP_003776138.1| hypothetical protein Hsero_2734 [Herbaspirillum seropedicae SmR1]
gi|300074831|gb|ADJ64230.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 263
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 29/193 (15%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERA-----------FELLENQIGEKI--------FISG 69
+ AIVVL +++A L + ++ +SG
Sbjct: 72 LSAEAARQAQAIVVLAAGS--LDQAPEYEGRDQPDYVALARLRYAARLQHQTGLPVLVSG 129
Query: 70 VH-HSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ + + L +R+D I + NTE NA ++A + VL+V
Sbjct: 130 GNAREETPEQNKALAMAEALREDFRTPVRWIEGGSENTEENALRSAALLRADGVQRVLLV 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIIS-HDLEENSSIFKIKILRV---LLIEYLKILL 181
T HMPR L + P S + + + LR E+L +
Sbjct: 190 TDAMHMPRAMLAFAQAGLVPTAAPTAFFSLPRWRWPALLPSAEGLRRSWYASYEWLGLGW 249
Query: 182 LSIQLSLSTQTAS 194
++ + ++ +
Sbjct: 250 YRLRAGQAMRSPT 262
>gi|152978996|ref|YP_001344625.1| hypothetical protein Asuc_1330 [Actinobacillus succinogenes 130Z]
gi|150840719|gb|ABR74690.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 274
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 41/185 (22%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIER---------AFELLENQIGEKI--------FISG 69
++ + D+ + AIV+L G +R + L + + ISG
Sbjct: 94 DRLTVEDYRNAQAIVIL-GGGLRDSKELFNTITVPGLVLERMRYAAYLHKETELPILISG 152
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ V I+ + ++ NT+ NA + E+ N ++
Sbjct: 153 ASPNGNSEAKVMGQEFFTFFGIQPKW------LEERSTNTKQNALYSKEILERENIKRIV 206
Query: 124 IVTHDYHMPRTFLELQR---------INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
++T+ +HM R + ++ + + + Y + + + LL
Sbjct: 207 LITNQWHMQRAKMLFEKQGFEVLPASVGPGIVPVSY--EHNAMHFIPQAGALNANMQLLK 264
Query: 175 EYLKI 179
E++
Sbjct: 265 EWIGY 269
>gi|116071502|ref|ZP_01468770.1| hypothetical protein BL107_05119 [Synechococcus sp. BL107]
gi|116065125|gb|EAU70883.1| hypothetical protein BL107_05119 [Synechococcus sp. BL107]
Length = 184
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 23/179 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L V L ++ G Y + + + + ++VL G+ R L Q+ + +
Sbjct: 3 LGVALTVWLFGPGPMAPY--RRALLNRRAPELVLVLGGDVDRERMGARL-ARQLELPLLV 59
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + LLQ+ + + + + Y+A +T N + HVL+VT
Sbjct: 60 SGGSNREYATWLLQEERLNPE----RVTLDYRARDTLSNFTSLVDELQSEGIQHVLLVTS 115
Query: 128 DYHMPRTFL--ELQRINSTVQFIPYPI--------------ISHDLEENSSIFKIKILR 170
+ H+PR+ ++ + + P+ IS L + + + LR
Sbjct: 116 ENHLPRSMAVGQVVAGSRGIHLTGVPVACSPDCEQEGRLKQISDWLRAMAWVITGRDLR 174
>gi|330793832|ref|XP_003284986.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
gi|325085107|gb|EGC38521.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
Length = 549
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 24/132 (18%)
Query: 39 AIVVL------TGEP-----IRIERAFELLENQIGE----KIFISGVHHSVS-------- 75
AI+VL G P R+ A + GE K+ +SG + S
Sbjct: 131 AIIVLGYSLHPDGMPTQILKERVVLAAQYYAQLQGEGSNIKLILSGKSKATSFEEDQGFN 190
Query: 76 -KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + +I + D+ I I + NT NA+ + +++N + IVT D+H+ R+
Sbjct: 191 SEAEAMNEIALHNDVPARDIMIENNSTNTAENAKYTLEFLKQHNIQRLFIVTSDFHVLRS 250
Query: 135 FLELQRINSTVQ 146
Q + +
Sbjct: 251 QYIFQTVFPSTY 262
>gi|330448188|ref|ZP_08311836.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492379|dbj|GAA06333.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 221
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 11/149 (7%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-VHH------SVSKDILLQKIPIRQ 87
I VL R+ ERA EL + + I SG V S S+ KI +
Sbjct: 24 KSDCIFVLGSNDDRVAERAVELYKQGLAPYIVFSGGVGELTEGLYSTSEAEHFAKIAMDM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTV 145
+ + I I ++ NT N E+ H ++V + RT ++ +
Sbjct: 84 GVPQQDIVIESESTNTGENVVFTRRLLEQEGLHPSSFILVQKPFMERRTLATFEQQWPNM 143
Query: 146 -QFIPYPIISHDLEENSSIFKIKILRVLL 173
+ P +S D N I ++ V++
Sbjct: 144 PAIVTSPQLSFDDYANDVISFGDLINVMV 172
>gi|328463014|gb|EGF34808.1| hypothetical protein AAULH_13826 [Lactobacillus helveticus MTCC
5463]
Length = 222
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
P + +VVL RI R E+ + G K+ +SG + + +
Sbjct: 51 PHLDYVVVLGAGIMGKTITPLLAARITRGIEIYQKNPGSKLIMSGGQGPGEDILEAEAMA 110
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ I + + I I K+ T N + + A + N IVT+ YH+ R + +R
Sbjct: 111 EYAINLGIPKEDIIIENKSRTTNENLRFSYALMKPN--SKFCIVTNSYHVYRALVLAKR- 167
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
+Q I Y + F + + E++ L+++ ++ + T + FF +
Sbjct: 168 -QGLQCIGYGAKTK------WYFTLNAF---VREFIAYLVITKRIQI---TVTGFFAVM 213
>gi|291003905|ref|ZP_06561878.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 189
Score = 59.1 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L ++ +SG S+ ++++ + + + + + ++T
Sbjct: 57 QGRLNVALALHRAGRVRRLIVSGSPHSRGYSEPVVMRDYLVARGVPPEDVLLDESGVDTC 116
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
+A+ A+ + +VT ++H+ R+ +R + + + L
Sbjct: 117 SSARAAA---RTFGLRAITVVTTNFHLRRSVALFRRAGIDTYGVGHDAAADGL 166
>gi|222100068|ref|YP_002534636.1| hypothetical protein CTN_1094 [Thermotoga neapolitana DSM 4359]
gi|221572458|gb|ACM23270.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 252
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 27/171 (15%)
Query: 2 RYFWYGLFVCLIFFIM--GFISFIRYVK-QMHIPDHPSVSAIVVLTGEP----------- 47
R+ + L L F+R ++ + +PD + ++V+ G
Sbjct: 47 RWLFVLLATFLYVLSSYPAEFLFLRPLEEDLIVPDGLPQNGVIVILGGGVERNTKTGDSL 106
Query: 48 -----IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKA 100
RI F++ + G I ++G S + ++++ + + E + + ++
Sbjct: 107 SDSTLRRILTGFQV-HRKTGLPILVTGGSLSGLEPEAIIMKEYLVSLGVPEKNVLVENRS 165
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
NT NA +++VT HM R ++ S V +PYP
Sbjct: 166 RNTYENAFFTKNLI---GDVPIVLVTDSIHMRRALYTFKKFFSEV--VPYP 211
>gi|326940847|gb|AEA16743.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 210
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|228940198|ref|ZP_04102769.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973089|ref|ZP_04133681.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979696|ref|ZP_04140020.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228780009|gb|EEM28252.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228786648|gb|EEM34635.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819324|gb|EEM65378.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 219
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|306841899|ref|ZP_07474579.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
gi|306288029|gb|EFM59431.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
Length = 205
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 43/142 (30%), Gaps = 24/142 (16%)
Query: 34 HPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGVH----- 71
V IVVL G RI L KI +SG
Sbjct: 17 PQHVDGIVVLGGYMNGEIVAGRQNFELNSAADRIVETMRLARLYPDAKIIVSGGEGTFFE 76
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
S + + + + K+ NT NA + A A L+VT YHM
Sbjct: 77 KSAREAETTRALLSDLGFSGDRYIFEGKSRNTVENAIFSQALALPKPGETWLLVTSAYHM 136
Query: 132 PRTFLELQRINSTVQFIPYPII 153
PR ++ V +P+
Sbjct: 137 PRAVGCFRKAGFDVT--AWPVD 156
>gi|257790208|ref|YP_003180814.1| hypothetical protein Elen_0438 [Eggerthella lenta DSM 2243]
gi|257474105|gb|ACV54425.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 215
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 25/153 (16%)
Query: 6 YGLFVCLIFFIMGFISFI---------RYVKQMHIPDHPSVSAIVVL------TGEPI-- 48
GL + + ++ + + + AIVVL G P
Sbjct: 2 LGLMLGCMLVVVAVFAATNVATIATTKDRIVEPQAAVGFDADAIVVLGASVFADGTPSGI 61
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNT 103
R++ L + + K+ +SG + +VS + +++ I Q + I + +T
Sbjct: 62 LRDRLDDGIALYKEGVAPKLIMSGDNSTVSYNEVQVMKDYAISQGVPSYDIFCDHAGFST 121
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++ T YH+ R
Sbjct: 122 YESMYRAKH---VFGAERIVVATQTYHLYRALY 151
>gi|229161985|ref|ZP_04289961.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
gi|228621466|gb|EEK78316.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
Length = 219
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTNDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + + I I K+L TE N + A
Sbjct: 84 SLYKNGDIKKIIFTGGTKFEAELEESRTARVYAMKQGVKDEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|90413116|ref|ZP_01221113.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
gi|90325959|gb|EAS42405.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
Length = 284
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 32/200 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFISF----------IRYVKQMHIPDHPSVSAIVVLTGEP---- 47
R F+ F + ++F + Q +P V I+VL
Sbjct: 34 RKGLASCFIAFAFLGIFMVAFQPIATSLLRPLETENQPFVPSSTPVDYIMVLGSGHVIDK 93
Query: 48 -------------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAEC 92
+R+ + G K+ +SG +S+ ++ K+ + + +
Sbjct: 94 AMPITSELSRTALMRLSEGMRIYRLFPGAKLILSGYGGGSDISQARMMAKVALALGVNKS 153
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
I + A +T A +A++ ++++VT HM R E + T P
Sbjct: 154 DILLLETARDTWEEAFQAASVV---GNKNLVLVTSASHMTRALYEFNQAGLTPTPAPTNF 210
Query: 153 ISHDLEENSSIFKIKILRVL 172
++ + + + L
Sbjct: 211 LASNKIKQPWDRYAPKAKYL 230
>gi|260434764|ref|ZP_05788734.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
gi|260412638|gb|EEX05934.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Length = 188
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 23/181 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L L+ +++G Y + + D ++VL G+ R L Q+ +
Sbjct: 5 LLLGAGLMAWLLGPGPLSPY--RRALLDRSPPQLVLVLGGDVDRERMGARL-ARQLDLPL 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+SG S + + + + + Y+A +T N + + HVL+V
Sbjct: 62 LVSGG----SNREYAEWMLSEERFNPDRVTLDYRARDTLSNFTSVVDELQADGVRHVLLV 117
Query: 126 THDYHMPRTFL--ELQRINSTVQFIPYPII--------------SHDLEENSSIFKIKIL 169
T + H+PR+ ++ + +Q P+ S L + + + L
Sbjct: 118 TSEDHLPRSMAVGQVVAGSRGIQLTGVPVACREDCVQEGHFKQWSDWLRAVAWVITGRDL 177
Query: 170 R 170
R
Sbjct: 178 R 178
>gi|198284290|ref|YP_002220611.1| hypothetical protein Lferr_2201 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248811|gb|ACH84404.1| protein of unknown function DUF218 [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 264
Score = 59.1 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 47/225 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS----------------AIVVLTGEPI 48
W L L+ +G + F + P AI+VL G +
Sbjct: 35 WRYLGRVLMLLALGTLYFFSTAIGARLLLLPLEDRYPPLTKPLHGADTPQAIIVLGGGEV 94
Query: 49 -----------------RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDL 89
R+ A +L Q G I SG + L + +RQDL
Sbjct: 95 MQSPGSNQETANARTLVRLLAAAQL-ARQTGLPIIPSGGAPRLGAPAEALTMEFILRQDL 153
Query: 90 -AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ I ++ NT NA +++A +++ H +VT HMPR +R V+ +
Sbjct: 154 GVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTSALHMPRAVAWFRRA--GVKVV 211
Query: 149 PYPII-----SHDLEENSSIFKIKILRV---LLIEYLKILLLSIQ 185
P P + L S + + L + EYL +L L IQ
Sbjct: 212 PVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLWLWIQ 256
>gi|218667128|ref|YP_002426951.1| hypothetical protein AFE_2571 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|218519341|gb|ACK79927.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 266
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 47/225 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS----------------AIVVLTGEPI 48
W L L+ +G + F + P AI+VL G +
Sbjct: 37 WRYLGRVLMLLALGTLYFFSTAIGARLLLLPLEDRYPPLTKPLHGADTPQAIIVLGGGEV 96
Query: 49 -----------------RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDL 89
R+ A +L Q G I SG + L + +RQDL
Sbjct: 97 MQSPGSNQETANARTLVRLLAAAQL-ARQTGLPIIPSGGAPRLGAPAEALTMEFILRQDL 155
Query: 90 -AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ I ++ NT NA +++A +++ H +VT HMPR +R V+ +
Sbjct: 156 GVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTSALHMPRAVAWFRRA--GVKVV 213
Query: 149 PYPII-----SHDLEENSSIFKIKILRV---LLIEYLKILLLSIQ 185
P P + L S + + L + EYL +L L IQ
Sbjct: 214 PVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLWLWIQ 258
>gi|269119959|ref|YP_003308136.1| hypothetical protein Sterm_1340 [Sebaldella termitidis ATCC 33386]
gi|268613837|gb|ACZ08205.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 208
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 65/190 (34%), Gaps = 29/190 (15%)
Query: 12 LIFFIMGFISFIRYVKQM------HIPDHPSVSAIVVLTGEPI----------RIERAFE 55
L+ FI G I + + + + V+L RI
Sbjct: 9 LLIFIAGIIIAYVVITAISICLYSKVDEKQPADVAVILGAGASDEKVSPVFQERINHGIS 68
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L +N+ +K+ +G + S + I+Q + + I + ++ T+ N + A
Sbjct: 69 LYKNKYVKKLIFTGGTGKGNQNSDAYTAMQYAIKQGVPKDDILLEEMSVITQENIKNAKM 128
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
+KN++H ++V+ HM R L + P P I L L
Sbjct: 129 IMDKNSYHTAILVSDPLHMKRAMLMAKNSKIDCYSSPTP-------TTKYITLKSTLPFL 181
Query: 173 LIE---YLKI 179
L E Y+
Sbjct: 182 LREVFFYVGY 191
>gi|119358364|ref|YP_913008.1| hypothetical protein Cpha266_2596 [Chlorobium phaeobacteroides DSM
266]
gi|119355713|gb|ABL66584.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 250
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 29/174 (16%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPIRIER---------------AFELLENQIGEKIFISG 69
Y + P A+VVL+G R++ EL + +G
Sbjct: 61 YSFRGSAASLPDADAVVVLSGMIERVDGAPLGEWGEAVDRFDGGIELFRAGKAPLLVFTG 120
Query: 70 V-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN--NFHHV 122
V + LL + + ++ I + K NT A + V
Sbjct: 121 GWIPWRPDRVPEGELLSRRAVLLGVSPEAIRVTEKVENTAEEAVAVRRLLGSGLGSEKTV 180
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILRV 171
++VT YHM R+ L +R ++ IP+P+ L S + LR+
Sbjct: 181 ILVTSAYHMHRSVLLFRR--EGLRVIPFPVDFSFGGPESLTVLSFLPDAGALRL 232
>gi|54025784|ref|YP_120026.1| hypothetical protein nfa38140 [Nocardia farcinica IFM 10152]
gi|54017292|dbj|BAD58662.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 218
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 19/137 (13%)
Query: 39 AIVVLTGEPIRIERA------FELLENQIGEKIF-------ISGVHH--SVSKDILLQKI 83
AIVVL + E L + + ++G + ++ +
Sbjct: 81 AIVVL--GYGLLPDGAMRPELVERLRAGYAQALLAPASPIIVTGGNPRNGTTEAAAMADW 138
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + + + +A T NA+ A+ ++VT H+PR +
Sbjct: 139 LVARGIPPARVHRDDRATTTRENAEYAARILAALGARDAVVVTSGDHVPRAVALFRAAGI 198
Query: 144 TV--QFIPYPIISHDLE 158
V P + + L
Sbjct: 199 EVAAALTPEEVPALALP 215
>gi|254360560|ref|ZP_04976709.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261492312|ref|ZP_05988874.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496099|ref|ZP_05992507.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091100|gb|EDN73105.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261308201|gb|EEY09496.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311995|gb|EEY13136.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 247
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 35/166 (21%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-------SVSAIVVLTGE-------PIR 49
+++ L LI +I + + + P + AIVVL G +
Sbjct: 38 YFFALLGILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGK 97
Query: 50 IE-RAFEL--------LENQIGEKIFISGVHHS------VSKDILLQKIPIRQDLAECCI 94
+ L L + G I +G + V D I
Sbjct: 98 LAITGIPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKW----- 152
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ KA T+ NA + EK N H +++VT+ +HM R + +
Sbjct: 153 -LENKAKTTKENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQ 197
>gi|317496202|ref|ZP_07954562.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
gi|316913777|gb|EFV35263.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
Length = 355
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 14/141 (9%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
V L F +G + + +VVL RI ++
Sbjct: 142 LVVLYFICIGVSYLAASTLNIINLLPRKLDYVVVLGAGLIGERVTPLLASRIRTGIKIYS 201
Query: 59 NQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
G K+ +SG VS+ ++ + Q ++E I + K+ NTE N + + +
Sbjct: 202 KHPGSKLIMSGGQGADEVVSEAFAMKNYALEQGVSEEDIIMEDKSTNTEENIKFSKRLMK 261
Query: 116 KNNFHHVLIVTHDYHMPRTFL 136
N +VT+ YH+ R +
Sbjct: 262 DVN-SRFALVTNYYHVYRALV 281
>gi|300867952|ref|ZP_07112592.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334089|emb|CBN57770.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 198
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
W+ + + ++ + GF Y +Q A+ VL G R A +
Sbjct: 21 SWFLMVLLIVCWF-GFNQIKSYWEQPQ--------ALFVLGGAAEREVFAAKFAREHPQL 71
Query: 64 KIFIS-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
I++S G + ++ + + + L + Y+A++T N + V
Sbjct: 72 PIWVSSGSNPEYAEWVFAEAGIDPERLH-----LDYRAVDTVTNFTTLVDELKAQGIQSV 126
Query: 123 LIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
++T D HM R + E+ + + F P+ S E
Sbjct: 127 YLITSDDHMRRARIIGEIVLGSRGISFKAIPVPSGRAPEP 166
>gi|134103151|ref|YP_001108812.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915774|emb|CAM05887.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 196
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L ++ +SG S+ ++++ + + + + + ++T
Sbjct: 64 QGRLNVALALHRAGRVRRLIVSGSPHSRGYSEPVVMRDYLVARGVPPEDVLLDESGVDTC 123
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
+A+ A+ + +VT ++H+ R+ +R + + + L
Sbjct: 124 SSARAAA---RTFGLRAITVVTTNFHLRRSVALFRRAGIDTYGVGHDAAADGL 173
>gi|301170456|emb|CBW30063.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 247
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTDNDDIPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|303242994|ref|ZP_07329449.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302589462|gb|EFL59255.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 263
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 70/172 (40%), Gaps = 21/172 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGE----------PIRIE 51
+ + + + FI+ FI + + ++ V +++L G R++
Sbjct: 69 FLRRSIKIGISAFIISFILIEGLIFATVRADNYTDVDYVIILGGGVKGGELSKTLQFRLD 128
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ E L+ K+ ++G ++S+ + ++ ++ E I + +A +T N +
Sbjct: 129 KGIEFLKEHPDLKVVVTGGKGFGETISEGEAMCNYLLQNNIPEDKIIVESEATSTMENFK 188
Query: 109 EASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
EK V+++T D+HM R+ + + S F PY I S
Sbjct: 189 YTKQILEKQTGKSNYKVMVITSDFHMLRSKI----LASFNGFTPYGIPSKTW 236
>gi|319776039|ref|YP_004138527.1| hypothetical protein HICON_13870 [Haemophilus influenzae F3047]
gi|319896847|ref|YP_004135042.1| hypothetical protein HIBPF05050 [Haemophilus influenzae F3031]
gi|329123197|ref|ZP_08251766.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
gi|317432351|emb|CBY80706.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450630|emb|CBY86850.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471542|gb|EGF16986.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
Length = 247
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTDNDDIPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAANYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|254252544|ref|ZP_04945862.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
gi|124895153|gb|EAY69033.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
Length = 303
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 56/189 (29%), Gaps = 31/189 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI------SFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFE 55
R+ G++ V + P+ + ++++ R +
Sbjct: 87 RFIAIAAVALFWLLSAGWLAAPLIAWAEAGVTPVERPEMRGQTTLILIGAGTHRTGTGLQ 146
Query: 56 LLENQIGEKIFI------------------SGVHH---SVSKDILLQKIPIRQDLAECCI 94
+ + I SG ++ + + + + +A +
Sbjct: 147 PPPDGNARIVKIAALYRACRQRAAHCTVVMSGGDPQHHGETEAAVYGRQLVAEGIAPADL 206
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ + T NA+ ++ + ++VT Y M R L+ +R P P+ +
Sbjct: 207 VLEPNSRTTYENAKFTASILRSRHDDARILVTSSYQMRRALLDFRRFGID----PQPVYA 262
Query: 155 HDLEENSSI 163
+ +
Sbjct: 263 NRRTPRTGW 271
>gi|159486076|ref|XP_001701070.1| hypothetical protein CHLREDRAFT_187568 [Chlamydomonas reinhardtii]
gi|158281569|gb|EDP07324.1| predicted protein [Chlamydomonas reinhardtii]
Length = 246
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 43/176 (24%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHI---PDHPSVSAIVVLTGEP------------IRI 50
+G + + + + PD V +VL G R+
Sbjct: 11 FGALLAVALSPAFLRWLHQTLGSRGPVVLPDDTVVDVAIVL-GYALFRNGTPTEPLKGRV 69
Query: 51 ERAFELLENQIGEKIFISGVHHS-----VSKDILLQK-----------------IPIRQD 88
EL + SG H S+ ++++ + Q
Sbjct: 70 REGVELYMRGRARNLLFSGAHPGGVVMKRSEANVMRECAEGVLRDSRAGGGAQGLLAAQR 129
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
E ++ +T NA + + + V +VT +H R+ + +R+
Sbjct: 130 WFE-----EDQSTSTWENAVFSLRICRQKGWRSVAVVTSPFHQIRSEMVFRRLLRD 180
>gi|291295513|ref|YP_003506911.1| hypothetical protein Mrub_1127 [Meiothermus ruber DSM 1279]
gi|290470472|gb|ADD27891.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 252
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 33/215 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHI-----PDHPSVSAIVVLTGEPI-------- 48
R G +C + + F + + IVVL G
Sbjct: 43 RVLLGGGVLCALLVAA--VVFTPLTRTLAEGLIVNEAPQKADLIVVLGGGMHCGAGELEA 100
Query: 49 ----RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY------ 98
R+E+ EL +I +S +V + + P +A + Y
Sbjct: 101 SSLARLEKGLELWRAGYAPRITLS---DTVGEIFGDARCPSLGRVAAQRVQALYGDEGPE 157
Query: 99 -----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ T A + + + VL+VT H R +++ V +
Sbjct: 158 ILFLPQMRTTRTEALAVAELVQARGWQRVLLVTTPAHSRRAAGAFRKLGLEVLSVNSSEP 217
Query: 154 SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
D + +++ L L+ EYL +L+ ++ L
Sbjct: 218 RFDRALAAPADRLQALTPLVREYLGLLVYRLRGWL 252
>gi|329768261|ref|ZP_08259762.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
gi|328837460|gb|EGF87089.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
Length = 340
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
V L F + + V + +VVL RI + ++ +
Sbjct: 140 LVVLYFLCIAMSYLVSSVLNFINILPRKIDYVVVLGAGLIGERVTPLLASRIRKGIKVYK 199
Query: 59 NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ G K+ +SG VS+ ++ + Q + E I + K+ +TE N + +
Sbjct: 200 SNPGSKLIMSGGQGPDEVVSEAFAMKNYALEQGVDEKDIILEDKSTSTEQNIIFSKKFIP 259
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ +VT+ YH+ R ++ + +
Sbjct: 260 AD--KSFAVVTNYYHVYRALVQARTLG 284
>gi|329925094|ref|ZP_08280038.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
gi|328940213|gb|EGG36545.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
Length = 194
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 36 SVSAIVVL-----TGE-----PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKI 83
A++VL G R++ A++L + I +SG V S+ L++K
Sbjct: 31 KADALIVLGYVSKDGRIHPLLKERLDEAYKLFRQYGHKYIIVSGGAVGSRRSEAELMEKY 90
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + + + K+ NT N + E+ + +I+T+ +H+ RT + R+
Sbjct: 91 LVEKGIPAKRVLKEDKSNNTVQNLIFSKQLMEQYHLKSFVIITNLFHVRRTKYIMHRLG 149
>gi|152989850|ref|YP_001355572.1| hypothetical protein NIS_0098 [Nitratiruptor sp. SB155-2]
gi|151421711|dbj|BAF69215.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 233
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 27/174 (15%)
Query: 31 IPDHPSVSAIVVLTGEP-------------IRIERAFELLENQIGEKIFISGVHHSVSKD 77
P + +VVL G RI L Q G + +G+ +K
Sbjct: 64 APSNVEPKYVVVLGGGYDRGKFFPTSASSTERILTGL-LTAQQKGLPLLFTGLEAEYAK- 121
Query: 78 ILLQKIPIRQDLAECCIDIGYK--ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ I Q + I Y+ +LNT NA + + + +VT YHMPR +
Sbjct: 122 ---RTIHTLQKTFSLKLSIRYEVKSLNTYQNAAFTAQKLPQ---KSICLVTSAYHMPRAY 175
Query: 136 LELQRINSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ ++ + + D + S+ +K + + EY+ +L L ++
Sbjct: 176 KLFRHFGFSITPVSCDYQTKDDIKVWDLFPSMEGLKKSYIAIHEYVGLLSLILR 229
>gi|219668605|ref|YP_002459040.1| hypothetical protein Dhaf_2577 [Desulfitobacterium hafniense DCB-2]
gi|219538865|gb|ACL20604.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 223
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 31/175 (17%)
Query: 6 YGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPSVSAIVVL-------TGEPI 48
L + +I F++G +S F P AI+VL TG+P
Sbjct: 7 RLLQLLVIVFLVGGLSVLSINFYVHSFSAKYIVTMDKPLPQTDAILVLGAYFNPNTGKPS 66
Query: 49 -----RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKAL 101
R+E A+E+ KI +SG H D + ++ + + + + I + +
Sbjct: 67 DMLGDRLETAYEVYTKNPDTKIIVSGDHGRKEYDEVNGMKDYLMAKGVPDEHIFMDHAGF 126
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+T + A + +++VT DYH+ R + +++ Y +I+
Sbjct: 127 STYESMYRAKEIFQ---VQSLIVVTQDYHLYRAIFDSRKMG----IESYGVIADK 174
>gi|290893680|ref|ZP_06556661.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556753|gb|EFD90286.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 189
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 18/163 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP--------IR 49
R + + I FI I + +++L G+P R
Sbjct: 3 RLKRISIILIAIGFIYLLIVAAFMFSGTRAKPSDNADTVLILGAKVNGDPAEPAEVLKER 62
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L ++ +SG S S+ ++++ + + + I I K+ TE N
Sbjct: 63 LDAAVTYLNENPTMQVVVSGGQGEDESASEASVMEEYLVNKGITRSRIKIENKSRRTEEN 122
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ + K N +IVT DYHM R + +R +P
Sbjct: 123 IKYSKE---KFNLGKTVIVTSDYHMYRALMLAKRQGLDASGLP 162
>gi|323137866|ref|ZP_08072941.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322396869|gb|EFX99395.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 263
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 24/143 (16%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGV----- 70
D P+ ++VL G R+ L +I +G
Sbjct: 75 DMPAPDGVIVLGGTVDEKLSAELGHTAMVDAAERLTAPIALKRRYPNARIVFTGGTAALR 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
++ +++ L I ++ NT NA + L+VT H
Sbjct: 135 GSPFTEAEGVKRFWRDVGLDAGDILYEDRSRNTFENAIFTRELVQPKPGERWLLVTSAMH 194
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ ++ I YP+
Sbjct: 195 MPRSIGIFRKA--NFPVIAYPVD 215
>gi|163840431|ref|YP_001624836.1| hypothetical protein RSal33209_1686 [Renibacterium salmoninarum
ATCC 33209]
gi|162953907|gb|ABY23422.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
33209]
Length = 282
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 17/135 (12%)
Query: 34 HPSVSAIVVLTGE----------PIRIERAFELLEN---QIGEKIFIS---GVHHSVSKD 77
S A+VVL + R+++ EL + S GV S +
Sbjct: 99 QRSPDAVVVLGSQIINGKAPPLLRSRLDKGLELYREISVGAAPLLIPSGGQGVGESRPEG 158
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHMPRTFL 136
+ + + + +A+NT N Q ++A A + +++VT++YH+ R L
Sbjct: 159 AAMAEYLVDAGAPPHDVVPELRAVNTAQNLQFSAAVAREYERLGSLVVVTNNYHVLRAAL 218
Query: 137 ELQRINSTVQFIPYP 151
+++ + + P
Sbjct: 219 LSRKLGINAEVVGSP 233
>gi|322514156|ref|ZP_08067222.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
gi|322119969|gb|EFX91970.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
Length = 248
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 23/147 (15%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LEN 59
I + + +++ I D+ AIVVL G + + EL L
Sbjct: 60 LIQAVTFTQKLTIEDYKKAQAIVVLGGG---LRDSNELFGNYAIAAPPLERMRYAAYLHK 116
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNN 118
Q G I ++G + D + + K+ TE NA +
Sbjct: 117 QTGLPILVTGGSPEGREPEAKIMAQELNDFFHVPVTWVEEKSNVTEENATFSKPILMHAG 176
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTV 145
H+++VT+ +HM R + +R V
Sbjct: 177 IQHIVLVTNQWHMKRAKMLFEREGFNV 203
>gi|300021971|ref|YP_003754582.1| hypothetical protein Hden_0439 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523792|gb|ADJ22261.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 30/189 (15%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTG-----------------EPIRIERAFELLENQ-IGEKI 65
R+ ++ ++ I+VL G R+ A + + + +
Sbjct: 67 RFEQRQPPLPDGHLTGIIVLGGFEDGWVTSNRGGLAINESAERLTEAIRIARQRPELKIV 126
Query: 66 FISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
F GV +++ + +A + I + +T NA
Sbjct: 127 FTGGVGDLFGGFEASEAIRQYVVDAGIAPERVIIENGSRDTYENAVLTLQTLNPAPDDRW 186
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR-------VLLIE 175
L+VT YHMPR ++ + P+P+ + + + + + E
Sbjct: 187 LLVTSAYHMPRAVGAFRQAGLNIS--PFPVDFRTRDAGDILRFPISVAAGLQRADLAVRE 244
Query: 176 YLKILLLSI 184
++ ++ I
Sbjct: 245 WIGLVAYRI 253
>gi|302877595|ref|YP_003846159.1| hypothetical protein Galf_0351 [Gallionella capsiferriformans ES-2]
gi|302580384|gb|ADL54395.1| protein of unknown function DUF218 [Gallionella capsiferriformans
ES-2]
Length = 254
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%)
Query: 10 VCLIFFIMGFISFIRYV-------KQMHIPDHPSVSAIVVLTGE----------PIRIER 52
++ +I F D P SAIV+L G +
Sbjct: 44 ALVLLWIASTPYFAEGALHLLENQTHALTADSPKASAIVILGGGTYFHAPEYDNQDTVSE 103
Query: 53 AFELLENQIGEKI--------FISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
A LL + G ++ ++G S+ ++ + +
Sbjct: 104 AT-LLRLRYGARLQRELNAPILVTGGKPLGNGTSEAHQMRTVLEEDFRIPARWTED-ASD 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
NT NA+ + +K + +VTH +HM R+ +
Sbjct: 162 NTFENARYSYQTLQKAGIRDIYLVTHAWHMLRSAAAFRAAG 202
>gi|325830373|ref|ZP_08163830.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
gi|325487840|gb|EGC90278.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
Length = 236
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 25/153 (16%)
Query: 6 YGLFVCLIFFIMGFISFI---------RYVKQMHIPDHPSVSAIVVL------TGEPI-- 48
GL + + ++ + + + AIVVL G P
Sbjct: 23 LGLMLGCMLVVVAVFAATNVATIATTKDRIVEPQAAVGFDADAIVVLGASVFADGTPSGI 82
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNT 103
R++ L + + K+ +SG + +VS + +++ I Q + I + +T
Sbjct: 83 LRDRLDDGIALYKEGVAPKLIMSGDNSTVSYNEVQVMKDYAISQGVPSYDIFCDHAGFST 142
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++ T YH+ R
Sbjct: 143 YESMYRAKH---VFGAERIVVATQTYHLYRALY 172
>gi|330938257|gb|EGH41926.1| hypothetical protein PSYPI_05668 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 256
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 51/187 (27%), Gaps = 37/187 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEASIMAQSL 146
Query: 87 QDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
QD + + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFAVAVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA--GF 204
Query: 146 QFIPYPI 152
+ P+
Sbjct: 205 TVVGAPV 211
>gi|320527634|ref|ZP_08028808.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
gi|320131955|gb|EFW24511.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
Length = 268
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIR 49
M + + L++ L+F + F+ + +++ + P H +VVL R
Sbjct: 62 MGFGFSVLYISLVF--VAFMFYSMFIQLL--PRHVDFDYVVVLGAGLIDGLRPTKLLANR 117
Query: 50 IERAFELLENQIGE-KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+++A + + I +SG VS+ ++ I + + I + K++NT
Sbjct: 118 LDKAIRVFNKSVSSCYIVVSGGQGSDEKVSEAEAMRTYLIDKGIKNHQIIMEDKSVNTFQ 177
Query: 106 NAQEASAWAEKNNFH-HVLIVTHDYHMPRTFL 136
N + + ++ + +VT ++H+ R L
Sbjct: 178 NMRNSYEIIKRRGGRMRIAVVTSNFHVYRALL 209
>gi|313813753|gb|EFS51467.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
Length = 208
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L +++ V + P AIV VL R++ A +L
Sbjct: 9 AFVALLGPWVLAGALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 67
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG H + +++ + + + I L+T A
Sbjct: 68 YRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVRARRIF 127
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 128 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 175
>gi|145637641|ref|ZP_01793296.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
gi|145269164|gb|EDK09112.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
Length = 247
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTDNDDIPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|330969451|gb|EGH69517.1| hypothetical protein PSYAR_03029 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 255
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ V AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQIPPLPQQRWAMLAQQVDAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTRENATMSAAILQPQGIKRVVLVTQAWHMPRARWCFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|115372876|ref|ZP_01460181.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310818526|ref|YP_003950884.1| hypothetical protein STAUR_1253 [Stigmatella aurantiaca DW4/3-1]
gi|115370143|gb|EAU69073.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309391598|gb|ADO69057.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 210
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 17/138 (12%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVL-----TGEP------IRIERAFELLENQIGEK 64
+ G + Q +VVL G R+E+A L + +
Sbjct: 28 VFGLAWRVDRFGQQERAAP--ADVLVVLGARVLPGGVPSGALLARVEKAVALYHQGLASR 85
Query: 65 IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ SG V+ S+ +++ + +R + + ++ +TE NA+ ++
Sbjct: 86 LLFSGGVGVNPP-SEAQVMRALAVRLGVPAEACFLEEQSHSTEQNARFSAQVLRALGAER 144
Query: 122 VLIVTHDYHMPRTFLELQ 139
V++V+ YH+ R +
Sbjct: 145 VVVVSDPYHLLRARQYFR 162
>gi|218245322|ref|YP_002370693.1| hypothetical protein PCC8801_0441 [Cyanothece sp. PCC 8801]
gi|218165800|gb|ACK64537.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 265
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 42/223 (18%)
Query: 6 YGLFVCLI---FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L + LI ++ + + P IVVL G
Sbjct: 45 FALVILLISSNAWVSSALIQSLEQQISPPVIIPQAEVIVVL-GGATKSPVKPRPMVDVNE 103
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A +L +Q I SG + + + Q + + + I
Sbjct: 104 HGDRLFYAAKLYLDQKAPLIIASGGRISWSGNSRPESEDMAQLLQM-LGVPSQAIIQEPN 162
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+LNT NA + VL+VT +H+PR L +++ V P +++E
Sbjct: 163 SLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEKLGINVIGTPTDYFVTEIDE 222
Query: 160 NSSIFK---------IKILR-----VLLIEYLKILLLSIQLSL 188
++ R + L EY+ + ++ L
Sbjct: 223 TNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKGWL 265
>gi|119484903|ref|ZP_01619385.1| hypothetical protein L8106_15560 [Lyngbya sp. PCC 8106]
gi|119457721|gb|EAW38845.1| hypothetical protein L8106_15560 [Lyngbya sp. PCC 8106]
Length = 227
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEK-----IFISGVHHSVSKDILLQKIPIRQDL 89
P AI+ L G R EL Q + I++S + + +
Sbjct: 41 PQPQAILTLGGGSNR-----ELFTAQFAQDHPDLDIWVSSGIPREPAMDIFRAAGVP--- 92
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQF 147
+ + + Y A++T N ++ N H+ ++T D+H+PR+ + + + F
Sbjct: 93 -DRRVHLDYLAVDTVTNFTSMVDEFKQRNIQHIYLITSDFHLPRSQAIATIVLGSQGITF 151
Query: 148 IPYPIISHDLEENSSIFKIKILRVLL 173
P + + + EE+S + R +L
Sbjct: 152 TPVAVPTPEKEESSLRIWRDMGRSIL 177
>gi|309972903|gb|ADO96104.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 247
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 41/208 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + D+ AIV+L G
Sbjct: 43 IGFTWLYIMSAPFTGLLLTDNDDTPALTLDDYKQAQAIVILGGGSYPTKELYAETASGSP 102
Query: 48 --IRI--------ERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCIDI 96
R+ E +L I G+ + L Q + E
Sbjct: 103 QLERLRYAAFLQKETGLPVLTTGYS---LI-GISEGDLMAKELNQFFNVPTQWIEN---- 154
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH- 155
KA NTE NA K++ +++VT+ +HM R ++ V
Sbjct: 155 --KARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSK 212
Query: 156 -DLEENSSIFKIKILR---VLLIEYLKI 179
+L S I + L VLL E++
Sbjct: 213 GNLSAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|148827124|ref|YP_001291877.1| hypothetical protein CGSHiGG_02255 [Haemophilus influenzae PittGG]
gi|148718366|gb|ABQ99493.1| molybdate ABC transporter permease protein [Haemophilus influenzae
PittGG]
Length = 247
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTDNDDIPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|71276641|ref|ZP_00652913.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71898002|ref|ZP_00680207.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71900050|ref|ZP_00682194.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|170730100|ref|YP_001775533.1| hypothetical protein Xfasm12_0924 [Xylella fastidiosa M12]
gi|182681372|ref|YP_001829532.1| hypothetical protein XfasM23_0820 [Xylella fastidiosa M23]
gi|71162568|gb|EAO12298.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71730193|gb|EAO32280.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71732246|gb|EAO34301.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|167964893|gb|ACA11903.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|182631482|gb|ACB92258.1| protein of unknown function DUF218 [Xylella fastidiosa M23]
Length = 182
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 55/178 (30%), Gaps = 23/178 (12%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELLENQI 61
+ F+++ +I ++ Q S I+VL RI L ++
Sbjct: 1 MFFWLVAVAGWIVWIGQRDQAA--SSDVIIVLGAAAYDAKPSPVFEERIRHGLYLYQHGY 58
Query: 62 GEKIFISGVHHSVSKD----ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +G S + ++ +R D+ I I + T N +A
Sbjct: 59 APTLIFTGGFGGSSARFAESQVARRYALRYDVPSRAILIETVSRTTRQNLIQARQLMRVY 118
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++V+ HM R R+ + + S + R LL E
Sbjct: 119 GLRRAIVVSDPLHMARAL----RLCRELDIDALASATPSTRFRSLHTR---WRFLLQE 169
>gi|332676512|gb|AEE73328.1| conserved membrane-associated protein, OmpA family
[Propionibacterium acnes 266]
Length = 229
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 30 AFVALLGPWALAGALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 88
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG H + +++ + + + I L+T A
Sbjct: 89 YRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVRARRIF 148
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 149 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 196
>gi|16273588|ref|NP_439843.1| hypothetical protein HI1701 [Haemophilus influenzae Rd KW20]
gi|260581042|ref|ZP_05848864.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1176139|sp|P44292|Y1701_HAEIN RecName: Full=Uncharacterized protein HI_1701
gi|1574555|gb|AAC23347.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092282|gb|EEW76223.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 247
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTNNDDSPALTLDEYKQAQAIVILGGGSYQTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|27380091|ref|NP_771620.1| hypothetical protein bll4980 [Bradyrhizobium japonicum USDA 110]
gi|27353245|dbj|BAC50245.1| bll4980 [Bradyrhizobium japonicum USDA 110]
Length = 301
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 31/182 (17%)
Query: 32 PDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISG----- 69
P + I+VL G R+ EL +I +G
Sbjct: 108 PSRGAPDGIIVLGGSVDTDLSAAHRTPVVASAADRMLAPAELARRFPNARIVFTGGSANL 167
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V + I + + + + + NT NA L+VT +
Sbjct: 168 VSTDAKEADYSAPILESLGIPKERLIVERDSRNTWENAVFTKQLVSPKPGERWLLVTSAF 227
Query: 130 HMPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILR--VLLIEYLKILLL 182
HMPR + V+ YP+ DL + I K + R V + E++ +L
Sbjct: 228 HMPRAMGIFHKAGFDVE--AYPVDWRMGGRDDLFAFTHIGKEGLGRTDVAMREWIGLLTY 285
Query: 183 SI 184
+
Sbjct: 286 RV 287
>gi|330953011|gb|EGH53271.1| hypothetical protein PSYCIT7_16874 [Pseudomonas syringae Cit 7]
Length = 256
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 67/224 (29%), Gaps = 44/224 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATVSFAVGLGGLWLMSLPVAVEFAARKLEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTWENATMSAAVLQPQGIKRVVLVTQAWHMPRARWSFEQAGF 204
Query: 144 TV--QFIPYPIISHDLEENSSIFKIK---ILRVLLIEYLKILLL 182
TV + Y + + + + + +LL E +L+
Sbjct: 205 TVVSAPVGYLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLLVY 248
>gi|229494703|ref|ZP_04388461.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229318370|gb|EEN84233.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 336
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 66/172 (38%), Gaps = 26/172 (15%)
Query: 2 RYFWYGLFVC---LIFFIMGFISFIRYVKQMHIPD----HPSVSAIVV----LTGE---- 46
+ +W + + L+ +GF+ F ++ ++ P + AIVV L+G
Sbjct: 116 QRYWLAVVLGSFSLVASYLGFL-FTSFLLYSYVYGRQKYQPGMDAIVVHGAGLSGADVTP 174
Query: 47 --PIRIERAFELLEN----QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIG 97
R+++A ++ + +SG VS+ + + + + +
Sbjct: 175 LLASRLDKAADVFRAEVREGRSPLLVVSGGKGSDEVVSEAEAMCVYLVDHGIPRESVILE 234
Query: 98 YKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFI 148
++ T N + N +++VT ++H+ RT + ++ + I
Sbjct: 235 DRSTTTLENLEYTRDLLRANTTKPRMVLVTSNFHILRTATFARSLDLDAEVI 286
>gi|167625319|ref|YP_001675613.1| hypothetical protein Shal_3408 [Shewanella halifaxensis HAW-EB4]
gi|167355341|gb|ABZ77954.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 166
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 48 IRIERAFELLENQIGEKIFISGV-----HHSVSKDIL--LQKIPIRQDLAECCIDIGYKA 100
R + A + Q K+ ++G + + + L + + LA+ DI +
Sbjct: 24 SRCQAALATYQKQPQSKLLLTGGFGAHFNQTTTPHALYCQRYLIKHGVLADAFTDIA-LS 82
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
T +A A E++ F+ + +VT ++HM R L + + F Y + E
Sbjct: 83 RFTFEDATLAKPIIEQHRFNEITLVTSEFHMQRAKLIFSELFPNISFNYYAAQTPVSAEK 142
Query: 161 SSIFKIKILRVLLIE 175
+ L V+ E
Sbjct: 143 LQQLEAHELSVMDRE 157
>gi|295106209|emb|CBL03752.1| Uncharacterized membrane protein [Gordonibacter pamelaeae 7-10-1-b]
Length = 214
Score = 58.3 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 16/126 (12%)
Query: 24 RYVKQMHIPDHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHH 72
+ AIVVL G P R++ L K+ +SG +
Sbjct: 29 DAIVDTETAAAFGADAIVVLGASVFADGTPSGILQDRLDDGIALYRAGAAPKMIMSGDNS 88
Query: 73 SVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+VS + + ++ I Q + I + +T + A +++ T YH
Sbjct: 89 TVSYNEVKAMKDYAIAQGVPSEDIFCDHAGFSTYESMYRAKH---VFGAERIVVATQTYH 145
Query: 131 MPRTFL 136
+ R
Sbjct: 146 LYRALY 151
>gi|317490841|ref|ZP_07949277.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920388|gb|EFV41711.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 182
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 13/117 (11%)
Query: 33 DHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
D + +VL R+ + L + I ++G + VS +
Sbjct: 20 DVRNADCAIVLGAGVKNGEPSPVFQERLNHSVYLYQKGYVGIIILTGGYSIGSHVSDAKI 79
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ + + + E I + ++ T N A + H+ LI++ HM R L
Sbjct: 80 AKRYLLAKGIPEMNIFLEEQSTVTRENLSYAKDVMNLHQLHNALIISDPLHMKRAIL 136
>gi|152981868|ref|YP_001355267.1| hypothetical protein mma_3577 [Janthinobacterium sp. Marseille]
gi|151281945|gb|ABR90355.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 258
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 39/227 (17%)
Query: 2 RYFWYGLFVCLIFFIM--------GFISFIRYVKQMHIP----DHPSVSAIVVLTGEPIR 49
R+ GL + ++ ++ G FI +++ + P D AIVVL R
Sbjct: 34 RWPRLGLGLSVLALVVLALCSTRFGATLFISPLEKFNPPLQLGDASGAQAIVVL--GGGR 91
Query: 50 IERAFE-----------LLENQIGEKI--------FISGVHH-SVSKDILLQKIPIRQDL 89
I A E L + + +SG + + ++
Sbjct: 92 ISNALEYAGQDIPSSPTLHRLRYAATLYRTTHLPVLVSGGQPDGAAVSEAAVMARVLRED 151
Query: 90 AECCID-IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ + + NT NAQ ++ + H+L+VT HM R + V
Sbjct: 152 FSVPVRWLEQASNNTAENAQLSARMLREAGVKHILLVTDAMHMQRAKQVFTQAGLKVVAA 211
Query: 149 PYPIISHDLEEN----SSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
P IS+ S ++ L E+L + + +
Sbjct: 212 PTIFISNARHTPADFLPSSQWLQQTSYALHEWLGLAWYRWRYPPAAD 258
>gi|300777919|ref|ZP_07087777.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
gi|300503429|gb|EFK34569.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
Length = 216
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 44 TGEPIRIERAFELLENQIGE----KIFISGVHHSV-SKDILLQKIPIRQDLAECCIDIGY 98
T R+ A++L KI +SG S+ L ++ + +A+ I
Sbjct: 63 TMSYSRMVTAYQLYHAYKTNNQSCKILVSGKGKGSMSEAELFRENFKKMGVADADIIKED 122
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
K++NT NA+ +S ++ + +VT +HM R+ Q F +P+ +
Sbjct: 123 KSMNTYENAKYSSRILKQMAPSSIDLVTSGFHMKRSVALFQ------TFGLHPVPN 172
>gi|269102447|ref|ZP_06155144.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162345|gb|EEZ40841.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 278
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG +S ++ K+ + D+ + I + A +T
Sbjct: 108 RLVEGIRIYRMYPGSKLILSGYGGGSDISHARMMAKVALALDVNKADILLLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A +A++ N +++VT HM R E + P ++ + E +
Sbjct: 168 AFQAASVVGDKN---LVLVTSASHMSRALYEFHQAGLNPIPAPTNFLASNKIEQPWVRYA 224
Query: 167 KILRVL 172
+ L
Sbjct: 225 PSSKYL 230
>gi|260654419|ref|ZP_05859909.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
gi|260631052|gb|EEX49246.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
Length = 241
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 24/170 (14%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIV-VLTGEPIRIERAFEL--- 56
R+ GL V L +G +R V+ + P A V VL+G +
Sbjct: 40 RWLAAGLLVFLAACTPLGGKWALRAVESLCPPRSDQKPASVLVLSGGA--VFDGVRFTAS 97
Query: 57 ----------LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
L+ G I +SG+ + L ++ +R+ + I + TE N
Sbjct: 98 PASVRRLRFALQQTNGGPILLSGIESPLLLSWLSERKDLRE------VLIERSSRTTEEN 151
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ ++ K + +VT +HM R L + VQF+ P+ S+
Sbjct: 152 FRFSAPILRKMSGPT-ALVTDKFHMARAALWARFYAPDVQFVFAPVPSYA 200
>gi|289675765|ref|ZP_06496655.1| hypothetical protein PsyrpsF_21006 [Pseudomonas syringae pv.
syringae FF5]
Length = 256
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 49/180 (27%), Gaps = 37/180 (20%)
Query: 8 LFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVLTGEPIR- 49
L +G + R ++Q+ AIVVL R
Sbjct: 34 LAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWATLAQQADAIVVLGNGRERN 93
Query: 50 -------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAECC 93
L L + G I SG H QD
Sbjct: 94 SPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEASIMAQSLQDDFAVA 153
Query: 94 IDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + T NA ++A + V++VT +HMPR ++ + P+
Sbjct: 154 VRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA--GFTVVGAPV 211
>gi|258621490|ref|ZP_05716524.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586878|gb|EEW11593.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 287
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 21/170 (12%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG S ++ ++ + + + I + A +T
Sbjct: 117 RLTEGIRISRMYPGSKMILSGYAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIAQPW 229
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQ--TASQFFITLIEEI 204
I R L E L +L ++ +++ TA I + E+
Sbjct: 230 DKYIPKARYLEQTEQYWHETLGLLWQKLRDTVAGDVNTAPAEPIINVPEV 279
>gi|94984590|ref|YP_603954.1| hypothetical protein Dgeo_0483 [Deinococcus geothermalis DSM 11300]
gi|94554871|gb|ABF44785.1| protein of unknown function DUF218 [Deinococcus geothermalis DSM
11300]
Length = 259
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 47/165 (28%), Gaps = 21/165 (12%)
Query: 31 IPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEKIFIS------GVHH 72
AI+VL G R+ R EL + +S G +
Sbjct: 77 AQPPVRADAIIVLGGGVQCGARTLESSSLTRLLRGLELWRAGYAPVLTVSEQSGLLGPPN 136
Query: 73 SVSKDILLQKI--PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
V L + + + + T A A + + VL+VT H
Sbjct: 137 CVKLSELERAQVRALYPTGGPEVLTLP-NVTTTRDEAARVRDLARERGWRRVLLVTSPSH 195
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
R V +P P D ++ LRVLL E
Sbjct: 196 SRRAARLFAAQGVNVVSVPAPETRFDTALLLPADRLSALRVLLYE 240
>gi|226943043|ref|YP_002798116.1| hypothetical protein Avin_09020 [Azotobacter vinelandii DJ]
gi|226717970|gb|ACO77141.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 253
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 24/196 (12%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERA--------F 54
W + ++ I + + P AIVVL G R + A
Sbjct: 46 LWLLSLPVTVEWLARAIEREPALAEAQWPRLAQRAEAIVVLGGGRERGDPAWGGDQPSPL 105
Query: 55 ELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCIDIGY---------KALNTE 104
L + ++ SG+ S + P L ++ + ++ T
Sbjct: 106 ALERLRYAARLARASGLPLLASGGLHFGAPPSEAALLGEVLEKDHGLQLRWREERSRTTW 165
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENSS 162
NA+ ++ + V++VT +HMPR +R +V P + + +
Sbjct: 166 ENARYSAELLQAEGIRRVVLVTQAWHMPRARWCFERAGFSVLPAPAGFLGVPNGRPLGGW 225
Query: 163 IFKIKILR---VLLIE 175
+ + + L +LL E
Sbjct: 226 LPEGRALWQSGLLLNE 241
>gi|145641039|ref|ZP_01796620.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
R3021]
gi|145274200|gb|EDK14065.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
22.4-21]
Length = 247
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTNNDDSPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|145635442|ref|ZP_01791143.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
gi|145267316|gb|EDK07319.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
Length = 247
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTDNDDIPALTLDEYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S + + L VLL E++
Sbjct: 216 SAKSFVPDLGALNSNMVLLKEWIGY 240
>gi|260914137|ref|ZP_05920610.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631770|gb|EEX49948.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 249
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 45/188 (23%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G I + EL L+ + + I
Sbjct: 68 DNLTLSDYQQAEAIVLLGGG---IRDSKELYAKLTVNSIPLERVRYAAYLQKETELPLLI 124
Query: 68 SGV------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+G V+ L + I KA T+ NA + +K +
Sbjct: 125 TGSSGAPQSEAEVAAIELRYFFNVPTKW------IEPKARTTKENAIYTAEILKKEGINK 178
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPI---ISHDLEENSSIFKIKILR------VL 172
+++VT+ +HM R L +R + +P + + + + +L
Sbjct: 179 IILVTNQWHMQRATLLYER--QGFKVLPASVGSGETPAVYGVGIWHFLPQAGVINKNMLL 236
Query: 173 LIEYLKIL 180
L E+L L
Sbjct: 237 LKEWLGYL 244
>gi|239813908|ref|YP_002942818.1| hypothetical protein Vapar_0901 [Variovorax paradoxus S110]
gi|239800485|gb|ACS17552.1| protein of unknown function DUF218 [Variovorax paradoxus S110]
Length = 201
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 19/188 (10%)
Query: 3 YFWYGLFVCLIFFIM-GFISFIRYVKQMHIPDHPSVSAIVVL------TGEP-----IRI 50
W L L+ +++ + + R + + P A +VL G+P R+
Sbjct: 4 VLWTVLLAGLLAYLVIAAVIWRRAAEALANPPQRPADAALVLGNRAFLDGKPNPCLTGRV 63
Query: 51 ERAFELLENQIGEKIFISG-VHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + + +++ +SG V + ++Q+ R + + + +T N
Sbjct: 64 DAAIALADAGLAKQLVLSGGVDKEDGRIEAEVMQR-HARAQGYAGPLLLEPASTSTRLNL 122
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + H V++V+ YH+ R + F +
Sbjct: 123 AMSRPLLKAAGIHGVIVVSEPYHLWRVERLARASGFDKDF---DVQYAAASTRCWRRWGM 179
Query: 168 ILRVLLIE 175
+ + L E
Sbjct: 180 VFKGALRE 187
>gi|326799244|ref|YP_004317063.1| hypothetical protein Sph21_1831 [Sphingobacterium sp. 21]
gi|326550008|gb|ADZ78393.1| protein of unknown function DUF218 [Sphingobacterium sp. 21]
Length = 242
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 42/214 (19%)
Query: 14 FFIMGFIS-FI---------------RYVKQMHIPDHPSVSAIVVLTGEP---------- 47
F+ GF+ FI + + + I+VL G
Sbjct: 32 LFVGGFLWLFIITCSPIPNILIYGLESKYRTYSRSRNDKIDYILVLGGGFTENKTLPNFE 91
Query: 48 -------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI A + + K+ +SG ++ ++S+ + + +
Sbjct: 92 QLSTASLSRISEAMRIKKIFPAAKLVMSGSKMNRTISQAEIYAHTVFELGFQRNDVVLLN 151
Query: 99 KALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD- 156
+ NT A+EA ++ K ++VT HM R + ++ + + +
Sbjct: 152 EPKNT---AEEAKSFNNKFGKGAKFILVTDAAHMQRALYAFRDMSPIPAPTNHYVKEPEK 208
Query: 157 --LEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
S KIK++ + + EY+ +L ++ L
Sbjct: 209 IYYAFKPSYLKIKMMNIAIHEYIGLLFYKLKNIL 242
>gi|294340205|emb|CAZ88577.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 252
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 32/187 (17%)
Query: 2 RYFWYGL--FVCLIFFIMGFISFI--------RYVKQMHI-PDHPSVSAIVVLTGEPI-- 48
R+F L + ++F + F R Q I P + VVL G
Sbjct: 32 RFFTRFLTYAITVLFLLASMPLFANLALGALERKATQEKICSPPPPGTLFVVLAGGIDGN 91
Query: 49 ----------------RIERAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAE 91
R+ A +L + + ISG +V + L+ + ++
Sbjct: 92 PMHAQDFSALKTASLKRLLAAVQLAQRTPDSTLLISGGWGRTVREANLMGALAVQLGFPA 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T A + +VT HMPR + V +P
Sbjct: 152 SRMILDTASRTTFQTAVNTRERILQFPVGRRYLVTSADHMPRAMMAFAH--EQVSICAWP 209
Query: 152 IISHDLE 158
+ +
Sbjct: 210 VDYEAIP 216
>gi|83311553|ref|YP_421817.1| hypothetical protein amb2454 [Magnetospirillum magneticum AMB-1]
gi|82946394|dbj|BAE51258.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 266
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 44/163 (26%), Gaps = 25/163 (15%)
Query: 28 QMHIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISG 69
Q P V I++L G R+ L ++ +G
Sbjct: 70 QTPDPLPDKVDGIIIL-GGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYPEARVVFTG 128
Query: 70 V-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + NT NA + + L+
Sbjct: 129 GSGNAFDQEHREADYAEMFYRDIGFETGRMVFERDSRNTRENATLSKELMQPKPGETWLL 188
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+T +HMPR + + V IP + + +++
Sbjct: 189 ITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGI-SRPWWSELR 230
>gi|320160500|ref|YP_004173724.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
gi|319994353|dbj|BAJ63124.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
Length = 222
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 16/149 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIR 49
M + L+ GF + + + + D P + +V R
Sbjct: 12 MFIVLILVATTLLLAARGFTALYAKSRIIPVADAPEMPVAIVFGAGLSRDGTPSPVLRDR 71
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+E A L +K+ +SG + V + +++ + + I + Y T
Sbjct: 72 VETAAALYFQGKVKKLLMSGDNRFVDYNEPGAMRQYALDLGVPAENIVLDYAGRRTYDTC 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A A ++VT +H+PR
Sbjct: 132 YRARAIF---GVTEAILVTQPFHLPRALY 157
>gi|261211840|ref|ZP_05926127.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
gi|260839190|gb|EEX65822.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
Length = 273
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIVQPW 220
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQTASQFFI-TLIEE 203
I R L E L +L ++ +++ + Q +++EE
Sbjct: 221 DKYIPKSRYLEQTEQYWYETLGLLWQKLRDTVAGDGSEQVGTPSVVEE 268
>gi|313622511|gb|EFR92931.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
Length = 189
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEPI 48
+ F+ L V +++ +F+ + ++ + I+ VL
Sbjct: 5 KKFFVILIVIGFIYVLIVAAFMFSGTRAKPDENVNTVLILGAKINGDPASPSLVL---QE 61
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L K+ +SG + ++ ++++ + + +A+ I+ K+ TE
Sbjct: 62 RLDAAVAYLNEYPKTKVIVSGGQGADETTTEAAVMEEYLVNEGIAKNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N + ++ K + +IVT DYHM R + +R +P
Sbjct: 122 NIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGIDATGLP 162
>gi|300786369|ref|YP_003766660.1| hypothetical protein AMED_4488 [Amycolatopsis mediterranei U32]
gi|299795883|gb|ADJ46258.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 329
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 21/158 (13%)
Query: 5 WYGLFVCLIFFIMGFISF------IRYVKQMHIPDHPSVSAIVVLTGE----------PI 48
W V + + G+ F + V I AI+VL
Sbjct: 121 WGSALVAIAVVLGGYFGFLFLSLLVYSVVYSRIGRRGGFDAIIVLGCGLDGERVPPLLAG 180
Query: 49 RIERAFELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ERA L + + + + G +VS+ + + + + I +A TE
Sbjct: 181 RLERAIRLHDREPEPPLLVVSGGRGPGETVSEAEAMHAYLRDRGIPDDHIRREDRARTTE 240
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + ++ V+ VT YH+ R +E +R+
Sbjct: 241 ENLRFSADLLPA-GARRVVAVTSSYHVFRAAVECRRLG 277
>gi|323467429|gb|ADX71116.1| Membrane protein [Lactobacillus helveticus H10]
Length = 343
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
P + +VVL RI R E+ + G K+ +SG + + +
Sbjct: 172 PHLDYVVVLGAGIIGKTVTPLLAARITRGIEIYQKNPGSKLIMSGGQGPGEDIPEAEAMA 231
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ I + + I I K+ T N + + A + N IVT+ YH+ R + +R
Sbjct: 232 EYAINLGIPKEDIIIENKSRTTNENLRFSHALMKPN--SKFCIVTNSYHVYRALVLAKR- 288
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
+Q I Y + F + + E++ L+++ ++ + T + FF +
Sbjct: 289 -QGLQCIGYGAKTK------WYFTLNAF---VREFIAYLVITKRIQI---TVTGFFAVM 334
>gi|299138643|ref|ZP_07031821.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298599279|gb|EFI55439.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 203
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 17/185 (9%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--PIRIERAFELLENQIGEKI- 65
+I ++G +R + + IVVL G+ R A LL G+K+
Sbjct: 11 IAIIILLLVGAFRVVRSGSYLVVNQPERSDVIVVLAGDHDDHRYWGALALLRAGYGQKMV 70
Query: 66 ------FISGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKN 117
G + +++ ++ C I +T A
Sbjct: 71 MDASSDLTYGQTSAERAAAFVRQSAGSNQSQISICTITND----STVQEAANIRNCLAGL 126
Query: 118 NF--HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ L+VT D+H R ++ + + + + + L E
Sbjct: 127 HPAPQSALLVTSDFHTRRALSIVRSRLPQYHWSVAAVNDSTIFGQPWWSNREWAKTALYE 186
Query: 176 YLKIL 180
+ K++
Sbjct: 187 WEKLV 191
>gi|71066602|ref|YP_265329.1| hypothetical protein Psyc_2048 [Psychrobacter arcticus 273-4]
gi|71039587|gb|AAZ19895.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 264
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 28/201 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGE----------P 47
+ FWY L+ + + + F FI ++Q P V+AI+VL
Sbjct: 67 LSRFWYALWTMFLIWFVSFGVFIYALQQQIEQSTRPIPKVAAIIVLGSGTVAGKPTPTLA 126
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNT 103
R++ A L+ +Q + SG + S+ ++ D++ I ++ +T
Sbjct: 127 KRLDTAAPLIHSQKSALVITSGGIGFGQTRSEANIMATYLYDTYDISLKRILQEGQSTST 186
Query: 104 EGNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFLELQR---INSTVQFIPYPIISHDL 157
N + + IVT D+H+ R + + + P P+ +
Sbjct: 187 AENLIYSQEILAAKGLSIKAPIAIVTSDFHIIRAANIARHQGYLQPIMLASPTPL---SI 243
Query: 158 EENSSIFKIKIL--RVLLIEY 176
N+ + L EY
Sbjct: 244 RYNAWFREYFAFVSGWLFGEY 264
>gi|289425979|ref|ZP_06427726.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289428008|ref|ZP_06429712.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295131649|ref|YP_003582312.1| hypothetical protein HMPREF0675_5190 [Propionibacterium acnes
SK137]
gi|289153522|gb|EFD02236.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289158891|gb|EFD07091.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291377167|gb|ADE01022.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763777|gb|EFS35141.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771794|gb|EFS37760.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313793673|gb|EFS41704.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802985|gb|EFS44193.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313808396|gb|EFS46863.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313810616|gb|EFS48330.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313816904|gb|EFS54618.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313818182|gb|EFS55896.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313821040|gb|EFS58754.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313824082|gb|EFS61796.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313827172|gb|EFS64886.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313829705|gb|EFS67419.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313831658|gb|EFS69372.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313834812|gb|EFS72526.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|313839386|gb|EFS77100.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314916668|gb|EFS80499.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918874|gb|EFS82705.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920885|gb|EFS84716.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314927065|gb|EFS90896.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932327|gb|EFS96158.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314956603|gb|EFT00855.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314959483|gb|EFT03585.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314961887|gb|EFT05988.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314964678|gb|EFT08778.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|314968916|gb|EFT13014.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314975008|gb|EFT19103.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314977895|gb|EFT21989.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979615|gb|EFT23709.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314984697|gb|EFT28789.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314988351|gb|EFT32442.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990247|gb|EFT34338.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315079332|gb|EFT51333.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315082373|gb|EFT54349.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083835|gb|EFT55811.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315087295|gb|EFT59271.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089713|gb|EFT61689.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315095586|gb|EFT67562.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315100252|gb|EFT72228.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315102576|gb|EFT74552.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315109664|gb|EFT81640.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326624|gb|EGE68412.1| putative integral membrane protein [Propionibacterium acnes
HL096PA3]
gi|327332888|gb|EGE74620.1| putative integral membrane protein [Propionibacterium acnes
HL096PA2]
gi|327335292|gb|EGE77002.1| putative integral membrane protein [Propionibacterium acnes
HL097PA1]
gi|327447716|gb|EGE94370.1| hypothetical protein HMPREF9571_00999 [Propionibacterium acnes
HL043PA2]
gi|327448591|gb|EGE95245.1| hypothetical protein HMPREF9570_00149 [Propionibacterium acnes
HL043PA1]
gi|327449557|gb|EGE96211.1| hypothetical protein HMPREF9568_00216 [Propionibacterium acnes
HL013PA2]
gi|327455902|gb|EGF02557.1| hypothetical protein HMPREF9581_00176 [Propionibacterium acnes
HL087PA3]
gi|327456005|gb|EGF02660.1| hypothetical protein HMPREF9584_00892 [Propionibacterium acnes
HL092PA1]
gi|328757215|gb|EGF70831.1| hypothetical protein HMPREF9579_00146 [Propionibacterium acnes
HL087PA1]
gi|328757406|gb|EGF71022.1| hypothetical protein HMPREF9563_00955 [Propionibacterium acnes
HL020PA1]
gi|328757598|gb|EGF71214.1| hypothetical protein HMPREF9588_01226 [Propionibacterium acnes
HL025PA2]
gi|328762014|gb|EGF75520.1| putative integral membrane protein [Propionibacterium acnes
HL099PA1]
Length = 208
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 9 AFVALLGPWALAGALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 67
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG H + +++ + + + I L+T A
Sbjct: 68 YRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVRARRIF 127
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 128 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 175
>gi|90579519|ref|ZP_01235328.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
gi|90439093|gb|EAS64275.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
Length = 275
Score = 57.9 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 11/155 (7%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG +S ++ K+ + +++ I + A +T
Sbjct: 108 RLVEGIRIARMYPGSKMILSGYGGGTDISHARMMAKVALALGVSKSDILLLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A +A++ N +++VT HM R E + P ++ + + I
Sbjct: 168 AHQAASVVGDKN---LVLVTSASHMSRALYEFHQAGLNPIPAPTNFLASNKIKQPWIRYA 224
Query: 167 KILRVL------LIEYLKILLLSIQLSLSTQTASQ 195
+ L E L L ++ L+ S
Sbjct: 225 PSSQFLYQTERYWHEKLGSLWQQLRTFLANHKESS 259
>gi|327458054|gb|EGF04709.1| hypothetical protein HMPREF9586_00155 [Propionibacterium acnes
HL083PA2]
Length = 208
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 9 AFVALLGPWALAGALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 67
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG H + +++ + + + I L+T A
Sbjct: 68 YRSGKAKVILVSGDHRETHYNEPKVMKTYLVSKGVPAARIVEDVAGLDTYDTCVRARRIF 127
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 128 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 175
>gi|299768888|ref|YP_003730914.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
gi|298698976|gb|ADI89541.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
Length = 261
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVLTGE----------PI 48
+ FW ++C +++G F ++K + + P V AI+VL
Sbjct: 65 LHTFWRFGWLCFWIWLIGLGYFFSFIKENKDTSDNIPPVRAIIVLGSGVENGQPSKILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L L+ Q + + G+ S + + + + + +A+ + + K+ +TE
Sbjct: 125 RLDTAAPLALKQQQAKVVLTGGLDFSEKESEALVMSRYLQQKYHIAKERMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
N + + + + + IVT D+H+PR
Sbjct: 185 LNLKNSQPLLAQQHINLNQPIAIVTSDFHIPRAVA 219
>gi|296139977|ref|YP_003647220.1| hypothetical protein Tpau_2273 [Tsukamurella paurometabola DSM
20162]
gi|296028111|gb|ADG78881.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 188
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQ 81
Y++ I + AIVVL G P R E L E + ++ +S V S+ L
Sbjct: 33 AYIRPRTIDELRPADAIVVLGGNPYDRFEYGITLAERGLAPQVVLSNSVGAQDSRMQQLC 92
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ C + + + T G AQE A++ + +++VT H+ R L+R
Sbjct: 93 DERVPDVQVTCFLPVPW---TTRGEAQELRRLAQERRWDEIIVVTTTAHVERARFILER 148
>gi|148975915|ref|ZP_01812704.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
gi|145964660|gb|EDK29913.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
Length = 253
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 64 KIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
K+ ISG + V++ + ++ +R + + I ++NT NAQ S + + F
Sbjct: 114 KVIISGGDAQGNGVTEAEIYEQQLLRLGVPKADIIQEPNSVNTWKNAQLTSDLMKHHQFD 173
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
++++V+ H+ R+ L V P+ S + S
Sbjct: 174 NIILVSSGLHIRRSELYFNHFGLEV----IPVRSDYMAAQISW 212
>gi|282900742|ref|ZP_06308684.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281194542|gb|EFA69497.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 175
Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 39 AIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
A++VL G R+ER A + I+I+G + K +
Sbjct: 25 AVLVLGGSSKRLERERFAANFAKKHPNIPIWITGGSPPDHTKKVFAKAGVNLSRLH---- 80
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPII 153
+ Y+A++T N + V ++T D+HM R + E+ + P +
Sbjct: 81 LDYEAVDTVTNFTTILDDLQDKKIKSVYLITSDFHMRRARVVGEIILGTRDISLKPISVP 140
Query: 154 S 154
S
Sbjct: 141 S 141
>gi|217963458|ref|YP_002349136.1| hypothetical protein LMHCC_0160 [Listeria monocytogenes HCC23]
gi|217332728|gb|ACK38522.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
gi|307571968|emb|CAR85147.1| conserved domain protein [Listeria monocytogenes L99]
Length = 189
Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 18/150 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP--------IR 49
R + + I FI I + +++L G+P R
Sbjct: 3 RLKRISIILIAIGFIYLLIVAAIMFSGTRAKPSDNADTVLILGAKVNGDPAEPAEVLKER 62
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L ++ +SG S S+ ++++ + + + I I K+ TE N
Sbjct: 63 LDAAVTYLNENPTMQVVVSGGQGEDESASEASVMEEYLVNKGITRSRIKIEDKSRRTEEN 122
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + K N +IVT DYHM R +
Sbjct: 123 IKYSKE---KFNLGKTVIVTSDYHMYRALM 149
>gi|134295565|ref|YP_001119300.1| hypothetical protein Bcep1808_1457 [Burkholderia vietnamiensis G4]
gi|134138722|gb|ABO54465.1| protein of unknown function DUF218 [Burkholderia vietnamiensis G4]
Length = 224
Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 37/198 (18%)
Query: 11 CLIFFIMGFISFIRYV-----KQMHIPDHP----SVSAIVVLTG-------------EPI 48
+F+++ + + +HP + IV+ TG
Sbjct: 15 AAVFWLLATGWLAAPLIAWSEAGVAPVEHPDMHGRTTLIVLGTGTRRSDNGLRPPPDGEA 74
Query: 49 RIERAFELLENQIGEKI----FISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI + L + I +SG ++ + ++ + Q +A + + +
Sbjct: 75 RIRKTAALYRVCREQTIRCTVVMSGGDPQRHGDTEAAVYGRLLLAQGVAPADLILEPDSR 134
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN- 160
T NA+ ++ + ++VT Y M R L+ + P P+ ++
Sbjct: 135 TTYENAKFTASILRSQHDDSRILVTSSYQMRRALLDFRHFGID----PQPVYANRRLAQC 190
Query: 161 ---SSIFKIKILRVLLIE 175
+ + E
Sbjct: 191 GLLPRWRNLAAANQAVHE 208
>gi|54027397|ref|YP_121639.1| hypothetical protein nfa54230 [Nocardia farcinica IFM 10152]
gi|54018905|dbj|BAD60275.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 178
Score = 57.6 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 9/141 (6%)
Query: 28 QMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
+ AI+VL G R E L + ++ S + +
Sbjct: 30 RPRTDAPAPADAILVL-GGAHDGREELGLRLARDGYAPRVLFS--DPYEYSARMNRICHG 86
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
C D T G +E + A + V++VT H+ R + +
Sbjct: 87 GYRFEVICFDPDP--RTTRGEGRELARRARAEGWQRVIVVTFTPHISRARYIIGKCWDGE 144
Query: 146 QFIPYPIISHDLEENSSIFKI 166
P L +
Sbjct: 145 LLFVDP--RPALSIPRWAYDY 163
>gi|332709823|ref|ZP_08429780.1| hypothetical protein LYNGBM3L_44370 [Lyngbya majuscula 3L]
gi|332351421|gb|EGJ31004.1| hypothetical protein LYNGBM3L_44370 [Lyngbya majuscula 3L]
Length = 198
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 20/117 (17%)
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+++F R+ + + + YKA++T N E +
Sbjct: 80 KGYAKRLF------------------TREGIEVSRLHLDYKAVDTVTNFTTLVDQLEAQD 121
Query: 119 FHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V ++T DYHM R L ++ + + P P+ S E R LL
Sbjct: 122 IDSVYLITSDYHMRRARLIGDIVLGSRGIVLKPLPVPSGKSPEPFEKALRDGARALL 178
>gi|256377332|ref|YP_003100992.1| hypothetical protein Amir_3239 [Actinosynnema mirum DSM 43827]
gi|255921635|gb|ACU37146.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 336
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 24/162 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV------SAIVVLTGE----------PI 48
W + + G++ F + ++ + V +AI+VL
Sbjct: 123 WVLAAAGSLVLLAGYLGFAFTLFLLYSVLYGRVRKRTGHTAIIVLGAGVPGGRVTPLLAG 182
Query: 49 RIERAFELL----ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++RA +L + SG S+ ++ + + + + ++
Sbjct: 183 RLDRALKLYRRAAAKGASPVVVASGGQGPDEPASEAEVMANYLRERGIPDEALLEEREST 242
Query: 102 NTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRIN 142
+T N + +SA + +L+VT YH+PR + +R
Sbjct: 243 STWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAG 284
>gi|150020778|ref|YP_001306132.1| hypothetical protein Tmel_0886 [Thermosipho melanesiensis BI429]
gi|149793299|gb|ABR30747.1| protein of unknown function DUF218 [Thermosipho melanesiensis
BI429]
Length = 236
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 27/203 (13%)
Query: 2 RYFWYGLFVCLIFFIMG----FISFIRYVKQMHIPDHPSVSAIVVLTGE----PIRIERA 53
R+ W + I + F FI + + P IVVL G IE
Sbjct: 34 RHIWRFFIILSITLYVISTPIFNFFISKLFIVDTKPIPKDGTIVVLGGGIVNYANNIEIG 93
Query: 54 F----ELLEN---QIGEKIFIS---GV-HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
LL+ +++ I GV + + +++ I+ +++ I +
Sbjct: 94 THTLKRLLKGWEIYKEKRLKIVVAGGVIGDGIREADVMKDFLIKLGVSKDDIITENTSRT 153
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-----INSTVQFIPYPIISHDL 157
T+ NA+ S + N +++VT HM R + ++ I V P + + L
Sbjct: 154 TKENAKNVSKITKDPN---IILVTSFLHMKRAKMLFEKYTQSNIIPVVCDYPIDLRKNFL 210
Query: 158 EENSSIFKIKILRVLLIEYLKIL 180
+ S I ++ E+L IL
Sbjct: 211 DFLPSPRGIYTFSLITHEFLGIL 233
>gi|260768178|ref|ZP_05877112.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|260616208|gb|EEX41393.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|315179879|gb|ADT86793.1| hypothetical protein vfu_A01625 [Vibrio furnissii NCTC 11218]
Length = 269
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ ++ G K+ +SG S +L ++ + +A+ I + A +T
Sbjct: 108 RLAEGIRVMRMYPGSKLILSGYAGGSEFSHARMLARVALALGVAKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HM R E +Q IP P
Sbjct: 168 ARQAAAFVQQ---RRLVLVTSASHMQRALNEFHSA--GLQPIPAP 207
>gi|269219771|ref|ZP_06163625.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211013|gb|EEZ77353.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
Length = 377
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 32/154 (20%)
Query: 10 VCLIFFIMGFISFIRY------------VKQMHIPDHPSVSAIVVLTGEPI--------- 48
VC+ + G + F V +P I++L
Sbjct: 165 VCIAIVVTGALVFTGLNVYMTTSTDDSVVTVNSVPSEAKADCILIL--GASVRANRKPSP 222
Query: 49 ----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALN 102
R+ER EL + K+ +SG + +V+ + ++++ + + I + +
Sbjct: 223 MLLKRLERGLELYRKKAAPKVLVSGDNATVAYNEVKVMREWLQAKGVPPQDIFEDHAGFS 282
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T + A + +++VT YH+ R
Sbjct: 283 TYESMYRARDVFK---VKRMIVVTQRYHLARAIY 313
>gi|115351425|ref|YP_773264.1| hypothetical protein Bamb_1372 [Burkholderia ambifaria AMMD]
gi|115281413|gb|ABI86930.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 224
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVL--------TG 45
R + +F+++ + + +HP++ ++ L TG
Sbjct: 6 RRRQIAIAGAAVFWLLATGWLAAPLIAWTEAGVTPVEHPAMHGRTTLITLGIGTRRGETG 65
Query: 46 ------EPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAEC 92
RI L Q + + +SG ++ + + + + +A
Sbjct: 66 LQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAVYGRRLVAEGVAPG 125
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ + ++V Y M R L+ + P P+
Sbjct: 126 DLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRHFGID----PQPV 181
Query: 153 ISHDLEENSSI 163
S+
Sbjct: 182 YSNRRRAQLGW 192
>gi|267991770|gb|ACY86655.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
Length = 250
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 87 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 146
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 147 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 202
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 203 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 239
>gi|257058358|ref|YP_003136246.1| hypothetical protein Cyan8802_0454 [Cyanothece sp. PCC 8802]
gi|256588524|gb|ACU99410.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 265
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 42/223 (18%)
Query: 6 YGLFVCLI---FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L + LI ++ + + P IVVL G
Sbjct: 45 FALVILLISSNAWVSSALIQSLEQQISPPVIIPQAEVIVVL-GGATKSPVKPRPMVDVNE 103
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A +L +Q I SG + + + Q + + + I
Sbjct: 104 HGDRLFYAAKLYLDQKAPLIIASGGRISWSGNSRPESEDMAQLLQM-LGVPSQAIIQEPN 162
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+LNT NA + VL+VT +H+PR L +++ V P +++E
Sbjct: 163 SLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEKLGINVIGAPTDYFVTEIDE 222
Query: 160 NSSIFK---------IKILR-----VLLIEYLKILLLSIQLSL 188
++ R + L EY+ + ++ L
Sbjct: 223 TNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKGWL 265
>gi|90424829|ref|YP_533199.1| hypothetical protein RPC_3338 [Rhodopseudomonas palustris BisB18]
gi|90106843|gb|ABD88880.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 264
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 37/185 (20%)
Query: 32 PDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHS- 73
D + ++VL G RI +L +I SG +
Sbjct: 74 ADGRAPDGVIVLGGSIDAEVSTARNALELDASAERIVVMLQLARRFPDARIVFSGGSANL 133
Query: 74 ----VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V++ + ++ +A I + ++ T NA A L+VT +
Sbjct: 134 LQAPVAEAPIAGRLLHSFGIAPERIVLEDRSRTTAENAAFTRALVTPAAGERWLLVTSAF 193
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSI--------FKIKILR--VLLIEYLKI 179
HMPR+ + + V+ YP+ D I + R V + E++ +
Sbjct: 194 HMPRSIAAFRAVGFDVE--AYPV---DWRTRGWIDAAMPFDRLSAGLARTDVAVHEWVGL 248
Query: 180 LLLSI 184
+ +
Sbjct: 249 IAYRL 253
>gi|319947009|ref|ZP_08021243.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
gi|319747057|gb|EFV99316.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
Length = 342
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 22/153 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+Y F+ L + + G F Y P AI+VL R+ +
Sbjct: 134 LFYSTFLYLSYVLYGT--FCNYFPVRKEP-----DAIIVLGSGLIGDKVPPLLAQRLTKG 186
Query: 54 FELLENQIGE-KIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+ E G K+ +SG S+ + I Q + + I I ++ T N
Sbjct: 187 KAIYEQFEGRPKLIVSGGQGADELTSEATAMANYLIEQGVPKEDILIENRSRTTFENLTF 246
Query: 110 ASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRI 141
+ A E VL+VT+ +H R + ++R+
Sbjct: 247 SKAILEDQGLGKSVLVVTNSFHALRAGVFMRRL 279
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 34/185 (18%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP---------- 47
+ +F+++ + + P + + AI++L G
Sbjct: 47 LAVCTAALFWLLAAGWLTVPLLHLAQPRWQTDTPARFAPRTAIIMLGGGTVYDDDHVLVP 106
Query: 48 -----IRIERAFELLEN-QIGE---KIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RI + + + + +SG + ++ +RQ + I
Sbjct: 107 PRDVLARIMASAQNYAACKRAAAICHVIVSGGNPQRHRATEADTYLPYLLRQQVPRADIV 166
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + T NA+ SA E + + ++++T Y MPR L+ R P P+IS+
Sbjct: 167 LENSSRTTYENARNVSAVLEGSRYDSLILITSAYQMPRAMLDFHRFG----LAPQPMISN 222
Query: 156 DLEEN 160
+
Sbjct: 223 ARRAH 227
>gi|154248380|ref|YP_001419338.1| hypothetical protein Xaut_4460 [Xanthobacter autotrophicus Py2]
gi|154162465|gb|ABS69681.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 267
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ +++ + E ++ K+ NT NA+ A A + L+VT +HMPR
Sbjct: 143 EAQMIRMSLPDLGIPEARVEFEGKSRNTAENAEFAKALLKPKPGERWLLVTSAWHMPRAV 202
Query: 136 LELQRINSTVQFIPYPII 153
+++ V +PYP+
Sbjct: 203 GCFRKVGFDV--VPYPVD 218
>gi|126726963|ref|ZP_01742801.1| hypothetical protein RB2150_17787 [Rhodobacterales bacterium
HTCC2150]
gi|126727083|ref|ZP_01742921.1| hypothetical protein RB2150_18387 [Rhodobacterales bacterium
HTCC2150]
gi|126703635|gb|EBA02730.1| hypothetical protein RB2150_17787 [Rhodobacterales bacterium
HTCC2150]
gi|126703755|gb|EBA02850.1| hypothetical protein RB2150_18387 [Rhodobacterales bacterium
HTCC2150]
Length = 220
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 24/172 (13%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPI--RIERAFELLENQIGEKIFISGVHHSVSK- 76
F+ + Q V VVL G P I+ A L + + I I+G +
Sbjct: 26 FLFLADLPQA-------VDLCVVL-GAPSYTNIDPAISLYHANLVKNIVITGFGPKGMRA 77
Query: 77 -DILLQKIPI------RQDLAECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIV 125
D + + R + + I + A NT N E + E N + + I
Sbjct: 78 ADDFVPEYAGLLDRALRAGVPQSAILLEKTATNTLENFVETAKIIEAEFSWNAINSIAIA 137
Query: 126 THDYHMPRTFLELQRINST-VQFIPYP-IISHDLEENSSIFKIKILRVLLIE 175
HM R + ++ V+ + P I S DL+ ++ + +L E
Sbjct: 138 GKPLHMRRAQMTARKHWPQHVKLVMLPTINSTDLQADTWFRSELGRKRILTE 189
>gi|331014754|gb|EGH94810.1| hypothetical protein PLA106_02555 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 256
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 40/210 (19%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPS-------VSAIVVL---------------- 43
GL++ + ++ F R ++Q+ AIVVL
Sbjct: 45 GLWLMSVPAVVEFA--ARKMEQIPPLPQQQRATLAQQADAIVVLGNGRERNSPTWGADTP 102
Query: 44 TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK--- 99
TG R+ A L + + G+H Q + + ++
Sbjct: 103 TGLGLERLRLAARLAKESGLPILTAGGLHFDQPPSEASIMAQALQQDFG--VTVRWQEGL 160
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI----ISH 155
+ T NA +A + V++VT +HMPR ++ + P+ + +
Sbjct: 161 SRTTWENATMTAAVLQPQGIKRVVLVTQAWHMPRARWSFEQA--GFTVVSAPVGFLGVDN 218
Query: 156 DLEENSSIFKIK---ILRVLLIEYLKILLL 182
+ + + VLL E +L+
Sbjct: 219 ARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|195873701|ref|ZP_02698260.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195632873|gb|EDX51327.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 237
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 189
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 190 IDSRSSPTRATRYKSWW---AQTRFLLRETFYYSGYRLLR 226
>gi|302847168|ref|XP_002955119.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
gi|300259647|gb|EFJ43873.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
Length = 251
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 51/176 (28%), Gaps = 36/176 (20%)
Query: 6 YGLFVCLIFFIMGFISFIRY------------VKQMHIPDHPSVSAIVVLTGEP------ 47
L +G ++F + +P +VL G
Sbjct: 4 VSLLSTAGALFVGLLAFALSPACLRWLHGLLAARTPPLPKDAIADVAIVL-GYALCRNGS 62
Query: 48 ------IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGY 98
R++ + + SG H V + + L G+
Sbjct: 63 LTEPLKGRVQAGVDAFLQGRARHLLFSGSHPGGVVVRRTEANVMREYAEQLMPAGEAAGW 122
Query: 99 K--------ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +T NA + A ++ + +LIVT +H R+ L +R+ S
Sbjct: 123 AERWLEEDASTSTYENALFSLAICKEKGWKTLLIVTSPFHQLRSELVFRRLVSEAT 178
>gi|205360555|ref|ZP_02684196.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348825|gb|EDZ35456.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 237
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILREQQWRTALLVSDPLHMLR----LKTIAQDNG 189
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 190 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 226
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 15/167 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVV---LTGEP------IRIE 51
+R Y +I +G S I Y + MH +AI++ L G R+E
Sbjct: 71 LRRIVYLCTTIIIILFLGLQSCILY-QGMHTDKQQGEAAIILGAQLHGSSISRLLRYRLE 129
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R + E + +SG + S+ +++ I+ +AE I + ++NT+ N
Sbjct: 130 RGIQFAEEYPNTYLIVSGGKGQAETCSEASAMKQYLIQHGVAESRILMEDASMNTQENLA 189
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ EK + I+T+D+HM R + + + YP S
Sbjct: 190 FSKVLMEKYHIKSASIITNDFHMFRA--GFIATSLGLSYHNYPARSD 234
>gi|258514186|ref|YP_003190408.1| hypothetical protein Dtox_0889 [Desulfotomaculum acetoxidans DSM
771]
gi|257777891|gb|ACV61785.1| protein of unknown function DUF218 [Desulfotomaculum acetoxidans
DSM 771]
Length = 236
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 33 DHPSVSAI-----------VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL-- 79
D P AI +V T R+ FEL + K+ +SG H S D +
Sbjct: 53 DVPKSDAILILGAYVYPNGIVSTMLNDRLTVGFELYQRGKAAKLIVSGDHGKFSYDEVNA 112
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++K I + + + + +T + A + N ++IVT YH+ R
Sbjct: 113 MKKFLIDKGARNEDVFMDHAGFSTYESLYRARDIFQAKN---IIIVTQQYHLLRAVF--- 166
Query: 140 RINSTVQFIPYPIISHDLE 158
I + Y + + +
Sbjct: 167 -IARELGLKAYGVAADRQD 184
>gi|226307785|ref|YP_002767745.1| hypothetical protein RER_42980 [Rhodococcus erythropolis PR4]
gi|226186902|dbj|BAH35006.1| hypothetical protein RER_42980 [Rhodococcus erythropolis PR4]
Length = 197
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
Query: 28 QMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
I S AIVVL G R E +L+++ ++ S + D ++ I
Sbjct: 48 SPKIDAPRSADAIVVL-GGAHDGREEVGIQLMKDGYAPRLIFS--NPYGDNDKKMRSICE 104
Query: 86 RQDLA--ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+C + TEG E A N + V++VT H+ R
Sbjct: 105 GTFDFPVDCFVPSPS---TTEGEGFEIERMANANGWKTVIVVTFVPHISRA 152
>gi|325283041|ref|YP_004255582.1| hypothetical protein Deipr_0809 [Deinococcus proteolyticus MRP]
gi|324314850|gb|ADY25965.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 265
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 26/196 (13%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-----HIPDHPSVSAIVVLTGE------------ 46
W GL + + G F V + AI+VL G
Sbjct: 61 LWAGL--GTVALLYGAALFTPLVPRALTALTEAQAPAPADAIIVLGGGLSCAEGSLEPAS 118
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL----- 101
R+ R +L + + S +++ + ++ D + L
Sbjct: 119 AARLSRGTDLWRAGYADTLVFSSQSDALTPPECPRMSDLQAAQLRRWFDRPPRILTLRGV 178
Query: 102 -NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEE 159
+T A++A+ + + VL+VT H R +R +++ V +P L
Sbjct: 179 TDTADEARQAARLEAEYGWRRVLLVTSPSHSARAAALFRRELSAEVLSVPAEEWRFSLSG 238
Query: 160 NSSIFKIKILRVLLIE 175
++ ++ L V+L E
Sbjct: 239 ETAQSRLAGLNVVLYE 254
>gi|226309357|ref|YP_002769317.1| hypothetical protein RER_58700 [Rhodococcus erythropolis PR4]
gi|226188474|dbj|BAH36578.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 336
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 26/172 (15%)
Query: 2 RYFWYGLFVC---LIFFIMGFISFIRYVKQMHIPD----HPSVSAIVV----LTGE---- 46
+ +W + + L+ +GF+ F ++ ++ P + AIVV L+G
Sbjct: 116 QRYWLAVVLGSFSLVASYLGFL-FTSFLLYSYVYGRQKYQPGMDAIVVHGAGLSGADVTP 174
Query: 47 --PIRIERAFELLEN----QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIG 97
R+++A ++ + +SG VS+ + + + + +
Sbjct: 175 LLASRLDKAADIFRAEVREGRSPLLVVSGGKGSDEVVSEAEAMCVYLVDHGIPRENVMLE 234
Query: 98 YKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFI 148
++ T N + + +++VT ++H+ RT + ++ + I
Sbjct: 235 DRSTTTLENLEYTRDLLRADTTKPRMVLVTSNFHILRTATFARSLDLDAEVI 286
>gi|84387309|ref|ZP_00990329.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
gi|84377758|gb|EAP94621.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
Length = 253
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 41/199 (20%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-------------AIVVLTGEP 47
+++ LF+ L+ F+ + ++ + AIV+L
Sbjct: 19 LQWRKTSLFLSLVLISS-FVLIGSGLIPRYLLNDLQADYESKPDIQWSDNNAIVLLGAGT 77
Query: 48 ----------------IRIERAF----ELLENQIGEKIFISGV---HHSVSKDILLQKIP 84
RI + + Q K+ ISG ++ V++ + Q+
Sbjct: 78 QLIKSTQEFEPAFFSFGRISETASQYKDCAKAQTTCKVIISGGDAQNNGVTEAEIYQQQL 137
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
+R D+ I ++NT NAQ S + + F ++++V+ H+ R+ L
Sbjct: 138 LRLDVPMDDIIQEPNSVNTWKNAQLTSDLMKHHKFDNIVLVSSGLHIRRSELYFNHFGLN 197
Query: 145 VQFIPYPIISHDLEENSSI 163
V P+ + + S
Sbjct: 198 V----IPVRADYMAAQISW 212
>gi|171059605|ref|YP_001791954.1| hypothetical protein Lcho_2924 [Leptothrix cholodnii SP-6]
gi|170777050|gb|ACB35189.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 271
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL-QRINSTVQFIPYPI-- 152
+ + + +T NA A +++VTH HMPR + S + +P +
Sbjct: 177 LEHDSRDTRENASGTVAMLRAAGVRRIVLVTHASHMPRALRAFNEAAGSDIACLPAAVAY 236
Query: 153 -ISHDLEENSSIFKI---KILRVLLIEYLKILL 181
DLE + + + LL E + +L
Sbjct: 237 TTQDDLEVLDWLPSAQGFQQVHALLHELIGLLA 269
>gi|172060464|ref|YP_001808116.1| hypothetical protein BamMC406_1412 [Burkholderia ambifaria MC40-6]
gi|171992981|gb|ACB63900.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 224
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVL--------TG 45
R + +F+++ + + +HP + ++ L TG
Sbjct: 6 RRRQIAIAGAAVFWLLATGWLAAPLIAWTEAGVTPVEHPDMHGRTTLITLGIGTRRGETG 65
Query: 46 ------EPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAEC 92
RI L Q + + +SG ++ + + + + +A
Sbjct: 66 LQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAVYGRRLVAEGVAPG 125
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ + ++V Y M R L+ + P P+
Sbjct: 126 DLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRHFGID----PQPV 181
Query: 153 ISHDLEENSSI 163
S+
Sbjct: 182 YSNRRRAQLGW 192
>gi|119509608|ref|ZP_01628755.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
gi|119465797|gb|EAW46687.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
Length = 198
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F L CL F + +R + HP AI++L+G+ R + E+ +
Sbjct: 5 LRLFT--LAGCLGMFTIATAIPLRLAIALQQKPHPQ--AILMLSGDSSRPKFTREMAQEF 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S + +L + + I +A +T N A ++NN
Sbjct: 61 PDLPIWVSVGDPEIR--SILDDLDNQGLQGGDRIQYDNRATDTVTNFTTIVAKVQQNNIR 118
Query: 121 HVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENS 161
HV +VT DYHMPR+ + + + F P + S + +
Sbjct: 119 HVYLVTSDYHMPRSQAIATIVFGSQGIAFTPVSVPSQSSQREA 161
>gi|152975811|ref|YP_001375328.1| hypothetical protein Bcer98_2067 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024563|gb|ABS22333.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 209
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 8 LFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEP-----------IRIERAF 54
+F+ +I ++ F+S+ Y D A VVL G RI A
Sbjct: 15 VFLLMISSMILFVSYAAYDIWSYRFKTDKVDTDAAVVL-GAAAWNGKPSPVFRERINHAI 73
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + +++++ + I I K+ TE N + A
Sbjct: 74 SLYQNGNIKKIIFTGGTKFEAELEEARTAKAYALKRNVKDEDILIETKSRFTEDNLKNAK 133
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ IV+ HM R + I P P
Sbjct: 134 QVGMEHGLQTYTIVSDPLHMKRAMQIAKHIGMDAYASPTP 173
>gi|260554696|ref|ZP_05826917.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411238|gb|EEX04535.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 376
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 192 VEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKKNHL 251
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+ + L + +++NT N + +S +K
Sbjct: 252 PIVL-SGVE-APYMQAWLKARGVDAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 303
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + SI R E
Sbjct: 304 VMLVTDEYHMPRTRRLF--ALNGIETIPVTAPMPTPLTRWQPSIQNYDHSRRANYE---- 357
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 358 LLATIRDML 366
>gi|260101969|ref|ZP_05752206.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084229|gb|EEW68349.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 309
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
P + +VVL RI R E+ + G K+ +SG + + +
Sbjct: 138 PHLDYVVVLGAGIMGKTVTPLLAARITRGIEIYQKNPGSKLIMSGGQGPGEDILEAEAMA 197
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ I + + I I K+ T N + + A + N IVT+ YH+ R + +R
Sbjct: 198 EYAINLGIPKEDIIIENKSRTTNENLRFSYALMKPN--SKFCIVTNSYHVYRALVLAKR- 254
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
+Q I Y + F + + E++ L+++ ++ + T + FF +
Sbjct: 255 -QGLQCIGYGAKTK------WYFTLNAF---VREFIAYLVITKRIQI---TVTGFFAVM 300
>gi|255505150|ref|ZP_05344767.3| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269303|gb|EET62508.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 222
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 27/176 (15%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIE-RAFELLENQIGEKIFISG--------- 69
F+ Q I + + RA EL ++ +I SG
Sbjct: 36 FIFVEDAPQ-------EADIIFIPGSGYGELALRAAELYHQKLAGQIVASGKYSILGDSF 88
Query: 70 ---------VHHS-VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
V S ++ L + + + + + +A T NA + E
Sbjct: 89 AGPLSPQEYVGKSYETESDFLTAVLVERGVPRSAVLQEKQATYTYENAIYTAKLLEGRTI 148
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
L+V +H R+ L + + + + P+ + + +++ + ++L E
Sbjct: 149 RRALLVCQAFHARRSLLYYKILFPETEILVCPVQTRGITKDNWYLDADRIDIVLGE 204
>gi|314967236|gb|EFT11335.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
Length = 195
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 17/146 (11%)
Query: 34 HPSVSAIV----VLTGE------PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQ 81
P AIV VL R++ A +L + + I +SG + + +++
Sbjct: 22 EPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADLYRSGKAKVILVSGDNRETHYNEPKVMK 81
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + I + L+T A ++VT DYH RT +
Sbjct: 82 TYLVSKGVPAARIVEDFAGLDTYDTCVRARRIF---GVDRAIMVTQDYHEIRTVATCR-- 136
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIK 167
+ + + P + + +
Sbjct: 137 MTGLDAVGVPDRTQPRDNVWWYGWGR 162
>gi|110597106|ref|ZP_01385395.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341297|gb|EAT59762.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 249
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 43/219 (19%)
Query: 8 LFVCLIFFIMGFISF-----------IRYVKQMHIPDHPSVSAIVVLTG----------- 45
L + L ++G S + ++ + + A+VVL+G
Sbjct: 32 LLIGLAIMVLGMFSLPVVSTSLIRAVEGWSTRVPVSSLHNADAVVVLSGIVVQLEGAPLG 91
Query: 46 ----EPIRIERAFELLENQIGEKIFIS-GVHH----SVSKDILLQKIPIRQDLAECCIDI 96
R E +L + I + G +V + LL K + E I +
Sbjct: 92 EWNDGVDRFEGGIDLFKAGKAPVIVFTRGQVPWQPDAVPEGELLAKRATLLGVPENAILL 151
Query: 97 GYKALNTEGNAQEASAW--AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
A NT A A +++VT +HM R ++ ++ V YP+
Sbjct: 152 TAVAGNTADEAVAAGKLLGVRSGVRKKIILVTSAFHMRRAAMQFEKAGFQVD--RYPVDF 209
Query: 155 HD--------LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
L+ +++ + L E + L ++
Sbjct: 210 QAGDNSEMTILDFLPDAGALEMSSIALREMIGWLYYWVK 248
>gi|224581941|ref|YP_002635739.1| secreted protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466468|gb|ACN44298.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 237
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 189
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 190 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 226
>gi|322433354|ref|YP_004210571.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321165743|gb|ADW71444.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 199
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 15/146 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL---TGEPI--------R 49
MR FW +F ++ + G V + + S AI+V+ T + R
Sbjct: 1 MRKFWL-VFAVVVCIMTGMAISYLTVPKENGQLE-SFDAIIVIGCPTADDGTLSPMQKAR 58
Query: 50 IERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ + + + SG + + ++ + + + + +A NT GN
Sbjct: 59 VLEGVKEFSAGKAKHLIFSGGASNNHSIESQVMAQAAAEMGVPNEAVFLDQEANNTLGNI 118
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPR 133
+ ++ +++ H+PR
Sbjct: 119 FFSHLIMTGKGWNSAEVISSQNHLPR 144
>gi|222529669|ref|YP_002573551.1| hypothetical protein Athe_1684 [Caldicellulosiruptor bescii DSM
6725]
gi|222456516|gb|ACM60778.1| protein of unknown function DUF218 [Caldicellulosiruptor bescii DSM
6725]
Length = 195
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 14/148 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLT----GE------PIR 49
MR F L I+ F + I P I+VL G+ R
Sbjct: 1 MRKFLKISLCTLATVILIFAVTEASIIIFGISAKPKKSDCIIVLGCAVYGDFPSPFFRER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ RAFEL +N I + G ++S+ ++ + + + K+ +T N
Sbjct: 61 LNRAFELYKNGYARYIIVCGAKGPGENISEAEAGKRYLVEMGVLPEFVLKEDKSFSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ K F +IV++ +H+ R
Sbjct: 121 LLYSKRIMNKKGFKSAIIVSNMFHLERA 148
>gi|253582533|ref|ZP_04859755.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835678|gb|EES64217.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 351
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ + +I ++G V++ L++K + + + + I +A +T G
Sbjct: 202 GRLEQGLAMYRKNPNAEIIVTGGVPKGGVTEAYLMKKWLVEKGVNPSKVHIEDQAKDTVG 261
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
NA + +K ++ +++ HM R +
Sbjct: 262 NALYSVEIMKKLGTENMTLISSASHMRRGLAVFK 295
>gi|262375317|ref|ZP_06068550.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309571|gb|EEY90701.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 379
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 33/178 (18%)
Query: 27 KQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGV 70
+Q + AIVVL G +R+E + E I +SGV
Sbjct: 203 QQAKPANSSQPYAIVVLGGGLTLDDQGKEIIVNNYTRLRLETTLAV-EKHYQLPIVLSGV 261
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDY 129
+ L+ + L + +++NT N + +S +K V+++T Y
Sbjct: 262 E-APYMQRWLKNHGVDAKL------LEDRSMNTCENTRFSSLLLQKKGGAPTVILITDRY 314
Query: 130 HMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
HMPRT + +Q IP P+ + S R E +L +++
Sbjct: 315 HMPRTRRLF--ALNGIQTIPVEAPMPTPLTRWRPSAQNYDHSRRANYE----MLATMR 366
>gi|161612436|ref|YP_001586401.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194469326|ref|ZP_03075310.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197262481|ref|ZP_03162555.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198242615|ref|YP_002214051.1| hypothetical protein SeD_A0103 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205357053|ref|ZP_02344474.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205357529|ref|ZP_02571064.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205358348|ref|ZP_02655427.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|161361800|gb|ABX65568.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455690|gb|EDX44529.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197240736|gb|EDY23356.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937131|gb|ACH74464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205324427|gb|EDZ12266.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331506|gb|EDZ18270.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335130|gb|EDZ21894.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|321222331|gb|EFX47403.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 237
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 189
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 190 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 226
>gi|322515196|ref|ZP_08068195.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
gi|322118806|gb|EFX91007.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
Length = 247
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 16/130 (12%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA-FELLENQIGEKI--------FISGV 70
+ + D+ S AIVVL+G I L + G + ++G
Sbjct: 68 DNLTLDDYRSAQAIVVLSGGMRDSQELFGSIATGDSTLDRMRYGAFLTKETSLPILVTGS 127
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ + + + Q + KA T+ NAQ + K + +++VT+ +H
Sbjct: 128 SPNGNSEAAMMAKEFEQFFQVKAKWLEEKAKTTKENAQFSREMLAKEGINKIVLVTNQWH 187
Query: 131 MPRTFLELQR 140
M R + ++
Sbjct: 188 MKRAKMLFEK 197
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + L ++ +SG S ++ ++++ + + + ID K+ T
Sbjct: 60 QERLDAAVDYLNEHPKARVIVSGGQGTDESETEASVMEEYLVNEGIRRARIDTETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + K +IVT DYHM R + +R N +P
Sbjct: 120 EENISNSKE---KFQLEKTVIVTSDYHMYRALMLAKRQNIDATGLP 162
>gi|282854897|ref|ZP_06264231.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582043|gb|EFB87426.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314924379|gb|EFS88210.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314981627|gb|EFT25720.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315092266|gb|EFT64242.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
gi|315094842|gb|EFT66818.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|327328685|gb|EGE70445.1| putative integral membrane protein [Propionibacterium acnes
HL103PA1]
Length = 206
Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 7 AFVALLGPWTLAAALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 65
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG + + +++ + + + I + L+T A
Sbjct: 66 YRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLDTYDTCVRARRIF 125
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 126 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 173
>gi|218709086|ref|YP_002416707.1| hypothetical protein VS_1092 [Vibrio splendidus LGP32]
gi|218322105|emb|CAV18210.1| Hypothetical protein VS_1092 [Vibrio splendidus LGP32]
Length = 301
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 11/153 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 138 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNAKMMAKVALALGVAKPDIILLETAKDT 197
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 198 WEEARQAAAFVKNKK---MVLVTSASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWN 254
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ ++ E + ++ S++ L T
Sbjct: 255 KYMPKAIYLEQTERYWHETMGLVWQSLRDWLDT 287
>gi|329930281|ref|ZP_08283883.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
gi|328935150|gb|EGG31634.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
Length = 202
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 12/156 (7%)
Query: 36 SVSAIVVLTGEPI--RIERAFELLENQIGEKIFISGVHH----SVSKDILLQKIPIRQDL 89
+ I V G R+ +A EL I +G ++ +++ +R +
Sbjct: 33 TGDCIFVF-GGRNLDRVWKAVELYNIGRAPYILFTGGDRFGEWEQTEAAMMRDEAMRMGI 91
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQRINSTV 145
I + + +T+ N + ++ +L+V+ HM R L L+
Sbjct: 92 PAEAILMETMSNHTKENIMASLIVLDRALGLERIQRILLVSAPGHMRRCQLMLKTFMPPW 151
Query: 146 QFIPY-PIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ P ++ + + +L E K++
Sbjct: 152 YEYVWCPDDRSHGRRDNWWIDPEEEKRVLGELKKVI 187
>gi|33152025|ref|NP_873378.1| hypothetical protein HD0881 [Haemophilus ducreyi 35000HP]
gi|33148247|gb|AAP95767.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 248
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 34/134 (25%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIF 66
Q+ + D+ + AIVVL G I + EL L+ Q G +
Sbjct: 67 ADQLSLADYQTAQAIVVLGGG---IRDSQELFAPISTNGTTFERMRYAAYLQKQTGLPLL 123
Query: 67 ISG----VHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+G + + Q + + A T+ NAQ + N +
Sbjct: 124 ATGSAINGNSEANIMAKEFAQFFAVETSW------LEENAKTTQENAQFSYEILANANIN 177
Query: 121 HVLIVTHDYHMPRT 134
+++VTH +HM R
Sbjct: 178 KIILVTHQWHMQRA 191
>gi|59713990|ref|YP_206765.1| hypothetical protein VF_A0807 [Vibrio fischeri ES114]
gi|59482238|gb|AAW87877.1| hypothetical protein VF_A0807 [Vibrio fischeri ES114]
Length = 217
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 21/157 (13%)
Query: 35 PSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIR 86
AI VL +R+ E A +L + + SG ++ +
Sbjct: 23 RKSDAIFVLCSYDLRVAEHAAQLYLDGYAPLLIFSGAQGRATEGLFTLSEAETFANVAKD 82
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFL-------- 136
+ I + KA NT N A ++ N +++V Y M R L
Sbjct: 83 MGVPSSAIIVETKATNTGENIFFTQALLKERNISVSSLILVQKPY-MERRLLATFLKNWN 141
Query: 137 --ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
E + + FI YP + +SI ++ R+
Sbjct: 142 DIEFCISSPNISFINYPTDEITFDHIASIILGELHRL 178
>gi|15838692|ref|NP_299380.1| hypothetical protein XF2101 [Xylella fastidiosa 9a5c]
gi|9107229|gb|AAF84900.1|AE004026_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 202
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 26/175 (14%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELLENQIGEK 64
+ G+I +I Q S I+VL RI L ++
Sbjct: 27 AVAGWIVWIGQRDQAA-----SSDVIIVLGAAAYDAKPSPVFEERIRHGLYLYQHGYAPT 81
Query: 65 IFISGVHHSVSKD----ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ +G S + ++ +R D+ I I + T N +A
Sbjct: 82 LIFTGGFGGSSARFAESQVARRYALRYDVPPRAILIETVSRTTRQNLIQARQLMRVYGLR 141
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++V+ HM R R+ + + S + R LL E
Sbjct: 142 RAIVVSDPLHMARAL----RLCRELDIDALASATPSTRFRSLHTR---WRFLLQE 189
>gi|145631591|ref|ZP_01787357.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
gi|144982791|gb|EDJ90317.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
Length = 247
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 66/205 (32%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + + AIV+L G
Sbjct: 43 ISFTWLYIMSAPFTGLLLTNNDDSPALTLDKYKQAQAIVILGGGSYPTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|200389290|ref|ZP_03215902.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606388|gb|EDZ04933.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 237
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 134 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 189
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S K R LL E Y LL
Sbjct: 190 IDSRSSPTRSTRYKSWWAK---TRFLLRETFYYSGYRLLR 226
>gi|298492064|ref|YP_003722241.1| hypothetical protein Aazo_3502 ['Nostoc azollae' 0708]
gi|298233982|gb|ADI65118.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 176
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 13/125 (10%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEK-----IFISGVHHSVSKDILLQKIPIRQDLAECC 93
A++VL G R+ER E K I+ISG + K +
Sbjct: 25 AVLVLGGSTRRLER--EKFTANFANKHPNIPIWISGGSPPRYTKEVFTKSGVDPRRLH-- 80
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYP 151
+ Y+A++T N + V ++T D+HM R E+ + ++F
Sbjct: 81 --LDYEAVDTLTNFTTLVDDLQARGIKSVYLITSDFHMRRACVIGEIVLGSRGIEFKAIS 138
Query: 152 IISHD 156
+ S
Sbjct: 139 VPSEQ 143
>gi|330963479|gb|EGH63739.1| hypothetical protein PSYAC_02287 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 256
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 54/189 (28%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLAAACFAAGLGGLWLMSLPVVVEFAARKMEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 ----------------TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
TG R+ A L + + G+H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPILTTGGLHFDQPPSEASIMAQAL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
Q + + ++ + T NA +A + V++VT +HMPR ++
Sbjct: 147 QQDFG--VTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVLVTQAWHMPRARWSFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|224541362|ref|ZP_03681901.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
gi|224525696|gb|EEF94801.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
Length = 345
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 6 YGLFVCLIFFIMGFIS---FIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + +F+ + ++ ++ H+ + I+VL RI++
Sbjct: 142 YAIISFTVFYFLSVLASYCLSAFLNTFHLFKKRKLDYIIVLGAGIKGEQVTPLLASRIDK 201
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+L+ + +SG + + + + I + + E I I K+ NT+ N
Sbjct: 202 GIEILKKNPKALLIMSGGQGKGEDIPEGEAMARYAINKGIDESKILIENKSTNTKENLLF 261
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+S K + V +VT YH+ R + + + ++ I + ++ L
Sbjct: 262 SSKLMTKESPR-VGLVTTSYHVFRALILAKNL--GIRCIGFGSVT---------KWYFTL 309
Query: 170 RVLLIEYLKIL 180
L+ E++ L
Sbjct: 310 NALIREFMGYL 320
>gi|307130843|ref|YP_003882859.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
gi|306528372|gb|ADM98302.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
Length = 259
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 46/142 (32%), Gaps = 27/142 (19%)
Query: 31 IPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV--- 70
PD P V+ IVVL G R+ L G ++ +G
Sbjct: 74 TPDFPKVNYIVVLGGGYTFNPDWPPSANLINNNLARVTEGIRLWRANPGARLIFTGAAAQ 133
Query: 71 -HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + + I + +A +TE A A K F L+VT
Sbjct: 134 GNPVTNASTAARVAE-SLGVPAQDILLVDQARDTEEEAAGTEALVGKQPF---LLVTSAN 189
Query: 130 HMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 HLPRAIRFFQA--RGLHPIPAP 209
>gi|242239630|ref|YP_002987811.1| hypothetical protein Dd703_2202 [Dickeya dadantii Ech703]
gi|242131687|gb|ACS85989.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 259
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 32 PDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---H 71
P P+V+ IVVL G R+ L G K+ +G
Sbjct: 75 PSFPAVNYIVVLGGGYTFNPDWAPSANLLSNSLPRVTEGIRLYRANPGAKLIFTGAAAQG 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++VS ++ + I + +A +TE A++A+ + F L+VT H+
Sbjct: 135 NTVSSARTAARVAESLGVPAQDILLLDQAHDTEEEARDAARLVGQQPF---LLVTSANHL 191
Query: 132 PRTFLELQRINSTVQFIPYP 151
PR ++ + IP P
Sbjct: 192 PRAMNFF--LSQGLHPIPAP 209
>gi|226941137|ref|YP_002796211.1| transmembrane protein [Laribacter hongkongensis HLHK9]
gi|226716064|gb|ACO75202.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9]
Length = 253
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 16/167 (9%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGE--PIRIERA---------FEL-----LENQ 60
G+++ +P AIVVL G P +E L L Q
Sbjct: 61 AGWLNRTLEAHVAVLPPDARFDAIVVLGGGKRPQAVEFGGDTVSADTLLRLRYAARLARQ 120
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+ + ++G + + + +L T NA+ ++ +
Sbjct: 121 SGKPVLVTGGAPLGGPPEAVLMAAALAEWQVSARWVESASLTTADNARLSAGLLRQAGVQ 180
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ +V+ +H+PR +R TV P H+ + + +
Sbjct: 181 RIALVSQAWHLPRAIRAFERQGLTVLPAPTAFTRHEEQGWLAWVAPR 227
>gi|301381971|ref|ZP_07230389.1| hypothetical protein PsyrptM_05027 [Pseudomonas syringae pv. tomato
Max13]
Length = 256
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 39/186 (20%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 ----------------TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
TG R+ A L + + G+H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPILTAGGLHFDQPPSEASIMAQAL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
Q + + ++ + T NA+ +A + V++VT +HMPR ++
Sbjct: 147 QQDFG--VTVRWQEGLSRTTWENAKMTAAVLQPQGIKRVVLVTQAWHMPRARWSFEQAGF 204
Query: 144 TVQFIP 149
TV P
Sbjct: 205 TVVSAP 210
>gi|86146468|ref|ZP_01064791.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
gi|85835731|gb|EAQ53866.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
Length = 268
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 11/153 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNAKMMAKVALALGVAKPDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 165 WEEARQAAAFVKNKK---MVLVTSASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWN 221
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ ++ E + ++ S++ L T
Sbjct: 222 KYMPKAIYLEQTERYWHETMGLVWQSLRDWLDT 254
>gi|325295248|ref|YP_004281762.1| hypothetical protein Dester_1066 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065696|gb|ADY73703.1| protein of unknown function DUF218 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 272
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 28/166 (16%)
Query: 39 AIVVLTGE------------------PIRIERAFELLENQIGEKIFISG--VHHSVSKDI 78
AIVVL G R+ AF++ + + I +SG V + +
Sbjct: 80 AIVVLGGGEIFHSPAEGMKAAVKPQVAKRLYTAFKIWKKVK-KPIVVSGGKVFNENVEAE 138
Query: 79 --LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+++ I + I K+ NT N K + +VT YHMPR++
Sbjct: 139 SSAMKRFLISLGIPNKEIIEESKSKNTFQNGIFTYKILNKKGIKKICLVTSAYHMPRSYR 198
Query: 137 ELQRINSTVQFIP--YPIISHDLEENSSIFKIKIL---RVLLIEYL 177
+ I +V +P Y + +S +++ L + + EY+
Sbjct: 199 IFKSIGFSVIPVPADYRVNRGSYSWSSYFPRMEDLYDSFLGIHEYV 244
>gi|209809505|ref|YP_002265043.1| hypothetical protein VSAL_II0731 [Aliivibrio salmonicida LFI1238]
gi|208011067|emb|CAQ81485.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 287
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG +VS ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIHIYRMYPGAKLILSGYSGGTTVSHARMMARVALSLGVNKSDILLLENARDTHEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + ++++VT HMPR E + P ++H +
Sbjct: 168 AIQT---LNSVGNSNLVLVTSASHMPRAMEEFHNLGLKPTPAPTNYLAHSEIKQPWEKYA 224
Query: 167 KILRVL 172
+ L
Sbjct: 225 PKAKYL 230
>gi|310780398|ref|YP_003968730.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309749721|gb|ADO84382.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 252
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE------PIRIE---RAFEL-----LENQIGEKIFISG 69
V+ + A VVL G I + L L N + I+I+G
Sbjct: 66 NRVQPAAAEEIEKGEAYVVLGGGIIEKTPVGNIPSETASVRLMNTAILYNSHPKTIYITG 125
Query: 70 ---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ VS+ + +KI I ++ + I ++ T NA+ S +K+N ++++VT
Sbjct: 126 GKVTNQQVSESSVYKKILIGLNIPDSDILTEERSRTTMENARYTSELLKKSNIKNIVLVT 185
Query: 127 HDYHMPRTFLELQRINSTVQFIP 149
HM R+ + ++ V P
Sbjct: 186 SASHMTRSKMTFEKQGFNVVPAP 208
>gi|148264641|ref|YP_001231347.1| hypothetical protein Gura_2597 [Geobacter uraniireducens Rf4]
gi|146398141|gb|ABQ26774.1| hypothetical protein Gura_2597 [Geobacter uraniireducens Rf4]
Length = 207
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 17/164 (10%)
Query: 1 MRYFWYGLFVCLIFFIM-GFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELL 57
+R W + + ++ G Y++ + + IV+ G+ R + A +LL
Sbjct: 10 IRKRWTLNVIVTFWLMLSGMALLSYYLR--YADEPVRSDVIVLFVGDEWMARQKEAAKLL 67
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIR-QDLAECCIDIGYKA-------LNTEGNAQE 109
+ + I + D PI L + + K NT E
Sbjct: 68 TDGYARCLIIPAYNRLTYLDSNGIMFPIEYNYLPGNSVYLLRKNHNYPTYYENTHFELLE 127
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPR----TFLELQRINSTVQFIP 149
A EK F LIV+ YHM R + + T+ +IP
Sbjct: 128 ARRIMEKLGFKSALIVSSPYHMRRIKIIAETVFKDVPKTIAYIP 171
>gi|237738277|ref|ZP_04568758.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420157|gb|EEO35204.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 252
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 68 SGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SG S+ + + I + I + + NT NA EKN ++++
Sbjct: 124 SGGSPLQNQESESSVYARELISLGVNSEDIIVEENSKNTNENALFIKQELEKNGIKNIIL 183
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
+T +HM R+ ++ V+ +P P
Sbjct: 184 ITSAFHMKRSMFIFEKNLDGVEIVPAP 210
>gi|54309547|ref|YP_130567.1| hypothetical protein PBPRA2380 [Photobacterium profundum SS9]
gi|46913983|emb|CAG20765.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 284
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 32/193 (16%)
Query: 9 FVCLIFFIMGFISF----------IRYVKQMHIPDHPSVSAIVVLTGEP----------- 47
F+ F + +SF + Q +P V I+VL
Sbjct: 41 FIAFAFLGIFMVSFQPIATSLLRPLETENQPFVPSSTPVDYIMVLGSGHVIDKAMPITSE 100
Query: 48 ------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
+R+ + G K+ +SG +S+ ++ K+ + + + I +
Sbjct: 101 LSRAALMRLSEGMRIYRLFPGSKLILSGYGGGSDISQARMMAKVALALGVNKSDILLLET 160
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
A +T A +A++ N +++VT HM R E + T P ++ + +
Sbjct: 161 ARDTWEEAFQAASVVGDKN---MVLVTSASHMTRALYEFNQAGLTPTPAPTNFLASNKIK 217
Query: 160 NSSIFKIKILRVL 172
+ L
Sbjct: 218 QPWDRYAPKAKYL 230
>gi|144899829|emb|CAM76693.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 261
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 26/143 (18%)
Query: 34 HPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGVHHSVS 75
V ++VL G R+ L + ++ SG SV+
Sbjct: 75 PQRVDGVIVL-GGALDPVVSAARDQVAANGAVERVNALIWLGRHYPKARLVFSGGSGSVT 133
Query: 76 KDI-----LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ ++ I ++ NT NA N L+VT H
Sbjct: 134 TPDKKEAPVARRYLNELGFGTDGIVFEDQSRNTRENAVYTKQLMAPKNGEVWLLVTSAMH 193
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ + I YP+
Sbjct: 194 MPRSMGAFAAV--DWPVIAYPVD 214
>gi|322615919|gb|EFY12836.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620704|gb|EFY17564.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623945|gb|EFY20782.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627393|gb|EFY24184.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630700|gb|EFY27464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638080|gb|EFY34781.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640566|gb|EFY37217.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647705|gb|EFY44190.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648055|gb|EFY44522.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656912|gb|EFY53198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657377|gb|EFY53649.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663697|gb|EFY59897.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666530|gb|EFY62708.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672311|gb|EFY68423.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676377|gb|EFY72448.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679530|gb|EFY75575.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686141|gb|EFY82125.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194985|gb|EFZ80171.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200106|gb|EFZ85193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201073|gb|EFZ86142.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209470|gb|EFZ94403.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212278|gb|EFZ97102.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216583|gb|EGA01309.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222478|gb|EGA06848.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225789|gb|EGA10009.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228670|gb|EGA12799.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236716|gb|EGA20792.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239783|gb|EGA23830.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242169|gb|EGA26198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249406|gb|EGA33322.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252259|gb|EGA36110.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256650|gb|EGA40380.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261316|gb|EGA44903.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265504|gb|EGA49000.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271708|gb|EGA55126.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 206
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 24/199 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--AIVVLTGEPI---------RI 50
RY ++ FI+ + Q D V+ AIV G R+
Sbjct: 4 RYITRIAAGIILIMATVFINNAIAIYQFSQQDQTRVADCAIVAGAGVSGKTPSPVFQARL 63
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + I + ++G + +VS + ++ + + + I I ++ T N
Sbjct: 64 DHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENI 123
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ A + + L+V+ HM R L+ I + S
Sbjct: 124 RYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNGIDSRSSPTRSTRYKSWW---A 176
Query: 168 ILRVLLIE---YLKILLLS 183
R LL E Y LL
Sbjct: 177 QTRFLLRETFYYSGYRLLR 195
>gi|260551279|ref|ZP_05825481.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260405736|gb|EEW99226.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 376
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 192 VEYVRKNPLPTQPKKLTEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKQNHL 251
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+K + L + +++NT N + +S +K
Sbjct: 252 PIVL-SGVE-APYMQAWLKKRGVDAKL------LEQRSMNTCENTRFSSLLLQKKGGAPT 303
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + SI R E
Sbjct: 304 VMLVTDEYHMPRTRRLF--ALNGIETIPVIAPMPTPLTRWQPSIQNYDHSRRANYE---- 357
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 358 LLATIRDML 366
>gi|159899964|ref|YP_001546211.1| hypothetical protein Haur_3447 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893003|gb|ABX06083.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 233
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGVHH 72
R+ IP P +V R++ A +L + + + +SG +
Sbjct: 39 YRFADVASIPSQPVA---IVFGAGIRYNQPSAALRERLDGAIQLYQAGRVQHLLMSGDNS 95
Query: 73 SVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ D +++ I + I Y +T A A + ++VT DYH
Sbjct: 96 QTNYDEVSVMRDYAIAHGIPASAITRDYAGFSTYETCYRAKAIF---GVNQAILVTQDYH 152
Query: 131 MPRTFL 136
+PR
Sbjct: 153 LPRAIY 158
>gi|194448844|ref|YP_002044067.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205359241|ref|ZP_02668425.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194407148|gb|ACF67367.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337510|gb|EDZ24274.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 249
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 86 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 145
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 146 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 201
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 202 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 238
>gi|194446096|ref|YP_002039329.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194404759|gb|ACF64981.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 206
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 158
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 159 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 195
>gi|62178663|ref|YP_215080.1| hypothetical protein SC0093 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126296|gb|AAX63999.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713116|gb|EFZ04687.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 206
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 158
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 159 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 195
>gi|293609314|ref|ZP_06691616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827766|gb|EFF86129.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 374
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 43/192 (22%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 190 VEYVRKNPLPVQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNGYTRLRLEKTLEVEKQNHL 249
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEKNN- 118
+ SGV ++ L E +D + +++NT N + +S +K
Sbjct: 250 PIVL-SGVE----------APYMQAWLKERGVDAKLLEKRSMNTCENTRFSSLLLQKKGG 298
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEY 176
V++VT +YHMPRT + ++ IP P+ + S+ R E
Sbjct: 299 APTVMLVTDEYHMPRTRRLF--ALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYE- 355
Query: 177 LKILLLSIQLSL 188
LL +I+ L
Sbjct: 356 ---LLATIRDML 364
>gi|16763488|ref|NP_459103.1| secreted protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205351438|ref|YP_002225239.1| secreted protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855611|ref|YP_002242262.1| hypothetical protein SEN0100 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|16418596|gb|AAL19062.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205271219|emb|CAR36007.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707414|emb|CAR31687.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245331|emb|CBG23119.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301156727|emb|CBW16201.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911068|dbj|BAJ35042.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323128416|gb|ADX15846.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326621795|gb|EGE28140.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626461|gb|EGE32804.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987050|gb|AEF06033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 206
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 158
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S R LL E Y LL
Sbjct: 159 IDSRSSPTRSTRYKSWW---AQTRFLLRETFYYSGYRLLR 195
>gi|312127289|ref|YP_003992163.1| hypothetical protein Calhy_1067 [Caldicellulosiruptor
hydrothermalis 108]
gi|311777308|gb|ADQ06794.1| protein of unknown function DUF218 [Caldicellulosiruptor
hydrothermalis 108]
Length = 195
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 13/116 (11%)
Query: 32 PDHPSVSAIVVLT----GE------PIRIERAFELLENQIGEKIFISGV---HHSVSKDI 78
I+VL G+ R+ RAFEL + I + G ++S+
Sbjct: 33 AKPKKSDCIIVLGCAVYGDFPSPFFRERLNRAFELYKKGYARYIIVCGAKGPGENISEAE 92
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ + + + K+ +T N A K F +IV++ +H+ R
Sbjct: 93 AGKRYLVESGVLPEFVLKEDKSFSTYENLLHAKRIMNKKGFKSAIIVSNMFHLERA 148
>gi|261406200|ref|YP_003242441.1| hypothetical protein GYMC10_2356 [Paenibacillus sp. Y412MC10]
gi|261282663|gb|ACX64634.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 217
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 10/139 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
G R+E A + ++G ++ ++ ++ + + E I + +A
Sbjct: 74 GLRERLEHALVEYNAGRFDTFIVTGGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEA 133
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIP---YPIIS 154
+T N + A E++ ++ +IVTHDYH R L ++ P+
Sbjct: 134 TSTYENLLYSQAIMEEHGWNTAIIVTHDYHGTRAMEVATALDYDQPSMSLTESTVLPMAK 193
Query: 155 HDLEENSSIFKIKILRVLL 173
H E + K R+L+
Sbjct: 194 HKSREVLAYTKWTADRLLI 212
>gi|171059762|ref|YP_001792111.1| hypothetical protein Lcho_3086 [Leptothrix cholodnii SP-6]
gi|170777207|gb|ACB35346.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 255
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 35/210 (16%)
Query: 4 FWYGLFVCLIFF---IMGFISF------IRYVKQMHIPDHPSVSAIVVLTGEPI------ 48
W G+ + + F + G R + + D P + +VL G
Sbjct: 40 LWAGMLLVYLAFATPLGGNALLRPLEDRAREAAALCLADGPPPTTAIVLAGGVDAGASQP 99
Query: 49 ------------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
R A ++ +SG H S+ + +L+ ++ + I I
Sbjct: 100 GDYQFLTEGSLRRTVAAAHWARADDTRRLLVSGGHGSIPEAVLMTRMLADLGIDSRRIRI 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR------INSTVQFIPY 150
+ NT + + +A V ++T HMPR ELQ
Sbjct: 160 DSASTNTAQSGRNIAAQLGPVQAGRVGVITSADHMPRALRELQSQGIATCAMPMDYRHVA 219
Query: 151 PIISHDLEENSSIFKIKILRVLLIEYLKIL 180
PI+ L + L EY+ +L
Sbjct: 220 PILPGHLVPQLTALGKST--RALHEYIGLL 247
>gi|206559863|ref|YP_002230627.1| hypothetical protein BCAL1497 [Burkholderia cenocepacia J2315]
gi|198035904|emb|CAR51796.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHP----SVSAIVVLTG------- 45
R + +F+++ + + +HP + I++ G
Sbjct: 20 RRRTISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTLRTDAG 79
Query: 46 ------EPIRIERAFELLE--NQIGEK--IFISGVHHSVSKDILLQKIP---IRQDLAEC 92
RI + L Q E+ + +SG D + Q +A
Sbjct: 80 LQPPPDGAARIRKIAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAQGVAPA 139
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ ++VT Y M R L+ +R P P+
Sbjct: 140 DLVLEPNSRTTYENAKFTASILRSQYDDARILVTSSYQMRRALLDFRRFGID----PQPV 195
Query: 153 ISHDLEENSSI 163
++ +
Sbjct: 196 YANLRRAQTGW 206
>gi|172037429|ref|YP_001803930.1| hypothetical protein cce_2516 [Cyanothece sp. ATCC 51142]
gi|171698883|gb|ACB51864.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 197
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 14/161 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
+ + L + + +G+ Y Q AI VL G R A +L
Sbjct: 22 KRLFPLLCLATLGLWLGYKQLQAYFVQPE--------AIFVLGGHEDRERFAAKLALEHP 73
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I++S + + D + Y+A +T N +
Sbjct: 74 DLPIWVSSGSPQNYVTKIFTSAGVSGDRLH----LDYQAKDTVTNFTTLVKEFKAQGIDS 129
Query: 122 VLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
V ++T D HM R + E+ + P + S D E
Sbjct: 130 VYLITSDNHMNRARIIGEIVFGTQGITLKPLSVPSDDSPEP 170
>gi|78213897|ref|YP_382676.1| hypothetical protein Syncc9605_2389 [Synechococcus sp. CC9605]
gi|78198356|gb|ABB36121.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Length = 191
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 23/181 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L L+ +++G Y + + D ++VL G+ R L Q+ +
Sbjct: 8 LLLGAGLMVWLLGPGPLSPY--RRALLDRSPPQLVLVLGGDVDRERLGARL-ARQLDLPL 64
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+SG S + + + + + Y+A +T N + + HVL+V
Sbjct: 65 LVSGG----SNREYAEWMLSEERFNPDRVTLDYRARDTLSNFTSVVDELQADGVRHVLLV 120
Query: 126 THDYHMPRTFL--ELQRINSTVQFIPYPII--------------SHDLEENSSIFKIKIL 169
T + H+PR+ ++ + +Q P+ S L + + + L
Sbjct: 121 TSEDHLPRSMAVGQVVAGSRGIQLSGVPVACREDCAQEGRLKQWSDWLRAVAWVMTGRDL 180
Query: 170 R 170
R
Sbjct: 181 R 181
>gi|116873811|ref|YP_850592.1| hypothetical protein lwe2395 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742689|emb|CAK21813.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 189
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 24/166 (14%)
Query: 1 MRYFWYGLFV--CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP------- 47
+R ++ L + C+ I+G + M + +++L G+P
Sbjct: 4 LRRIFFILIISGCIYLIIVGAFMYSG----MRAKPVEAADTVLILGAKVEGDPAVPSLVL 59
Query: 48 -IRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L + K+ +SG ++ ++++ + + +A I+ K+ T
Sbjct: 60 KERLDEAVTYLNDYPKTKVVVSGGQGADERTTEASVMEEYLVNEGIARNRIETENKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K + +IV+ DYHM R + R V +P
Sbjct: 120 EENIKYSNE---KFDLGKTVIVSSDYHMYRALMLANRQGIDVSGLP 162
>gi|91787552|ref|YP_548504.1| hypothetical protein Bpro_1670 [Polaromonas sp. JS666]
gi|91696777|gb|ABE43606.1| protein of unknown function DUF218 [Polaromonas sp. JS666]
Length = 255
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-IISHDL 157
+A +T GNA+ + ++ + +VTH +HMPR+ + V P +I +
Sbjct: 166 EARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLER 225
Query: 158 EENSSIFKIKIL 169
+ + L
Sbjct: 226 DILEWMPSAHGL 237
>gi|271500774|ref|YP_003333799.1| hypothetical protein Dd586_2243 [Dickeya dadantii Ech586]
gi|270344329|gb|ACZ77094.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 259
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 46/142 (32%), Gaps = 27/142 (19%)
Query: 31 IPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV--- 70
PD P V+ IVVL G R+ L G K+ +G
Sbjct: 74 TPDFPKVNYIVVLGGGYTFNPDWPPSANLINNSLARVTEGIRLWRANPGAKLIFTGAAAQ 133
Query: 71 -HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ S + + I + KA +TE A A K F L+VT
Sbjct: 134 GNPVTSASTAARVAE-SLGVPAQDILLVDKARDTEEEAAGTEALIGKQPF---LLVTSAN 189
Query: 130 HMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 HLPRAIRFFQA--RGLHPIPAP 209
>gi|328882308|emb|CCA55547.1| SanA protein [Streptomyces venezuelae ATCC 10712]
Length = 238
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 21/178 (11%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELL 57
L L + ++ K D P+ VV R++ A EL
Sbjct: 25 LGAVLALAPVTWMHTAAAGKLRTTADVPARDVAVVFGAGLWNGRPTPYLAHRLDTAAELY 84
Query: 58 ENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ + ++G + + D ++ + + + I Y +T + A +
Sbjct: 85 RSGKVRVLLVTGDNSRTAYDEPSAMRAYLTARGVPDTRIVSDYAGFDTWDSCVRAR---K 141
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
++VT D+H+ R R Y + + + + R L
Sbjct: 142 VFGVDRAVLVTQDFHIKRAVALCGRAGVD----SYGVGVPEPHDRTWY--YGTTRELF 193
>gi|171318455|ref|ZP_02907610.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171096369|gb|EDT41271.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 224
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVL--------TG 45
R + ++F+++ + + + P + +++L TG
Sbjct: 6 RRRQIAIAGVVLFWLLATGWLAAPLIAWTEAGVTPVERPDMHGRTTLIILGIGTRRGDTG 65
Query: 46 ------EPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAEC 92
RI + L Q + + +SG ++ + + + + +A
Sbjct: 66 LRAPPDGEARIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAVYGRRLVEEGVAPG 125
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ + ++V Y M R L+ + P P+
Sbjct: 126 DLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRHFGID----PQPV 181
Query: 153 ISHDLEENSSI 163
S+
Sbjct: 182 YSNRRRARMGW 192
>gi|325110724|ref|YP_004271792.1| hypothetical protein Plabr_4196 [Planctomyces brasiliensis DSM
5305]
gi|324970992|gb|ADY61770.1| protein of unknown function DUF218 [Planctomyces brasiliensis DSM
5305]
Length = 218
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 26/171 (15%)
Query: 31 IPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL 89
P + V + +L G R A E+ + ++I I+ L P
Sbjct: 51 KPLNKRVDFVFILGGGANDRPIVAAEIYKAGFADRILIA-------SPEFLPDTPHEART 103
Query: 90 AECCI-------DIGYKAL--------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++ +AL +T G + ++ IVTH+YH R
Sbjct: 104 EADLVRSMLTWENVPLEALEQLTLPEPSTRGEILALKEYMAEHALQQGAIVTHNYHTRRV 163
Query: 135 FLELQRINSTV---QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L + + + + ++ LR +E++K +
Sbjct: 164 RLLVTSLMQEDMSSRLNYVSCPTDGFSPDNWWKFESGLRTYWLEFVKYVAA 214
>gi|257465061|ref|ZP_05629432.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
gi|257450721|gb|EEV24764.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
Length = 247
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 30/136 (22%)
Query: 28 QMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV 70
+ + D+ AIVVL G R+ A L + I +G
Sbjct: 70 TLTLQDYRQAQAIVVLGGGLRDSNELYGKLTVTNNELERMRYAAYLHKETQLP-ILATGS 128
Query: 71 HH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ Q + I +A T+ NA EK + +++
Sbjct: 129 APNGNSEAEIIAKEFKQFFDVPTKW------IESQAKTTKENALYTKDILEKEGINTIIL 182
Query: 125 VTHDYHMPRTFLELQR 140
VT ++HM R L ++
Sbjct: 183 VTQNWHMQRAKLLFEQ 198
>gi|330960152|gb|EGH60412.1| hypothetical protein PMA4326_16471 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 256
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 38/194 (19%)
Query: 23 IRYVKQMHIPDHPS-------VSAIVVL----------------TG-EPIRIERAFELLE 58
R ++Q+ AIVVL TG R+ A L +
Sbjct: 59 ARQLEQVPPLPQQQWATLAQQADAIVVLGNGRERNSPTWGADTPTGLGLERLRLAARLAK 118
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK---ALNTEGNAQEASAWAE 115
+ G+H Q + + ++ + T NA + +
Sbjct: 119 ESGLPILTTGGLHFDQPPSEAAIMAQSLQQDFG--VTVRWQEGLSRTTWENATLTANVLQ 176
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI----ISHDLEENSSIFKIK---I 168
V++VT +HMPR ++ + P+ + + + + +
Sbjct: 177 PLGIKRVVLVTQAWHMPRARWSFEQA--GFTVVGAPVGFLGVDNARPFGGWLPESRVFTQ 234
Query: 169 LRVLLIEYLKILLL 182
VLL E +L+
Sbjct: 235 SGVLLNEAAGLLVY 248
>gi|312880505|ref|ZP_07740305.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
gi|310783796|gb|EFQ24194.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
Length = 263
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 28 QMHIPDHPSVSAIVVLTGEP----------------IRIERAFELLENQIGEKIFI---- 67
+ +P+ + +A+VVL G R+ A E+ + G +F
Sbjct: 73 RPSLPEGDAPAAVVVLGGGVRYDERGEPILPGAYTLERLVTAAEVARD-RGWPLFCCGGR 131
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S+ L+ ++ +R + + T N ++ + V++VT
Sbjct: 132 VQGGTGGSEGDLMARV-LRSWNPGVAVTAETGSRTTWENLVRVGTLLQERDIRRVVLVTS 190
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
+HMPR+ +R+ ++ P+P
Sbjct: 191 TFHMPRSLASARRLLPGLEVHPWP 214
>gi|111022697|ref|YP_705669.1| hypothetical protein RHA1_ro05733 [Rhodococcus jostii RHA1]
gi|110822227|gb|ABG97511.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 205
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 28 QMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKI-PI 85
+ I + AIVVL G P R + EL E ++ IS + S D + K
Sbjct: 55 RPQIDPLRTADAIVVLGGTPYERFDIGVELAERGYAPQLVIS--NSVGSGDRTMDKYCHS 112
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST- 144
D C T+G AQE A + +HH+++VT H+ R +++
Sbjct: 113 HFDFVVSC--FEPDPWTTKGEAQEIGRRAAQQGWHHIIVVTFTPHISRARYIVEKCFDGE 170
Query: 145 VQFIPYPIIS 154
V + P S
Sbjct: 171 VTMVASPTPS 180
>gi|282897433|ref|ZP_06305435.1| Protein of unknown function DUF218 [Raphidiopsis brookii D9]
gi|281198085|gb|EFA72979.1| Protein of unknown function DUF218 [Raphidiopsis brookii D9]
Length = 184
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 39 AIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
A++VL G +ER A + I+I+G + + +K +
Sbjct: 25 AVLVLGGSSKHLERERFAANFAKKHPNIPIWITGGSPADHTKKVFKKAGVNLSRLH---- 80
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPII 153
+ Y+A++T N + V ++T D+HM R + E+ + P +
Sbjct: 81 LDYEAVDTVTNFTTIVDDLQDKKIKSVYLITSDFHMRRARVVGEIILGTRDISLKPISVP 140
Query: 154 S 154
S
Sbjct: 141 S 141
>gi|213966840|ref|ZP_03394991.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|302058769|ref|ZP_07250310.1| hypothetical protein PsyrptK_02187 [Pseudomonas syringae pv. tomato
K40]
gi|302135145|ref|ZP_07261135.1| hypothetical protein PsyrptN_27398 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928690|gb|EEB62234.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 256
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 39/186 (20%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 ----------------TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
TG R+ A L + + G+H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPILTAGGLHFDQPPSEASIMAQAL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
Q + + ++ + T NA +A + V++VT +HMPR ++
Sbjct: 147 QQDFG--VTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVLVTQAWHMPRARWSFEQAGF 204
Query: 144 TVQFIP 149
TV P
Sbjct: 205 TVVSAP 210
>gi|220933067|ref|YP_002509975.1| hypothetical protein Hore_22350 [Halothermothrix orenii H 168]
gi|219994377|gb|ACL70980.1| uncharacterized conserved protein [Halothermothrix orenii H 168]
Length = 256
Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 25/174 (14%)
Query: 40 IVVLTGE----------------PIRIERAFELLENQIGEKIFISG---VHHSVSKDILL 80
IVVL G R+ + L + IF G H S+ +
Sbjct: 83 IVVLGGGINYFGEKGEGKLNPITLQRLVTGYRLYKEVETTLIFTGGQGIGHSGPSEADVA 142
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLEL 138
+ + + + + +A NT N + E+ N V +VT H+PR
Sbjct: 143 GEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRNGLDRGVYLVTSAVHLPRAVGVF 202
Query: 139 QRINSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+R+N V +P + L+ + + + E++ +L ++ +
Sbjct: 203 RRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAAIHEWIGLLWYKVRGRI 256
>gi|125974276|ref|YP_001038186.1| hypothetical protein Cthe_1772 [Clostridium thermocellum ATCC
27405]
gi|281418329|ref|ZP_06249349.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|125714501|gb|ABN52993.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|281409731|gb|EFB39989.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 262
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 24/172 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGE----------PIR 49
+R ++G LI F F+ + + + V +V+L R
Sbjct: 70 LRRLFFG---ALIAFAGSFVLILGLIFASSDTDKNVEVDYLVILGAGLKGDRITPTFQYR 126
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+++ E L K+ ++G +++ +++ + + E I + +A +T N
Sbjct: 127 LDKGVEYLRANPELKVVVTGGQGPGEDLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNEN 186
Query: 107 AQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + ++ ++IVT+D+HM R + + F PY I +
Sbjct: 187 MKYTAEVLKQLTGRSDYRIMIVTNDFHMFRAKI----LARHNGFTPYGITAP 234
>gi|330445713|ref|ZP_08309365.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489904|dbj|GAA03862.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 275
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG ++S +L K+ + +++ I + A +T
Sbjct: 108 RLAEGIRIYRMYPGSKMILSGYSGGTTMSHARMLAKVALALGVSKSDILLLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A +A++ N +++VT HM R E + P ++ + + +
Sbjct: 168 AHQAASVVGSKN---LVLVTSASHMSRALNEFHQAGLDPIPAPTNFMATNKIKQPWVRYA 224
Query: 167 KILRVL 172
+ L
Sbjct: 225 PSSQFL 230
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E+A EL + + I SG VH++ + +++K I L + I KA++T
Sbjct: 60 KSRVEKAIELYCHNKIDYIIFSGGKVHNTYEEAAIMEKYAISLGLDKKIIIKENKAISTF 119
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + ++NF+ L+VT+ +H+ +
Sbjct: 120 HNLLYCTEIMNEHNFNSCLVVTNGWHLRKA 149
>gi|302871560|ref|YP_003840196.1| hypothetical protein COB47_0901 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574419|gb|ADL42210.1| protein of unknown function DUF218 [Caldicellulosiruptor
obsidiansis OB47]
Length = 195
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGE------------P 47
MR F L ++ I F+ + I P I+VL
Sbjct: 1 MRKFSRILLYSMVILIFIFVITEASIIVFGISAKPKKSDCIIVL--GCAVYGNFPSPFFR 58
Query: 48 IRIERAFELLENQIGEKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ +AFEL + I + G ++S+ ++ I + + I ++ +T
Sbjct: 59 ERLNKAFELYKKDYARYIIVCGAKGAGENISEAEAGKRYLIGKGVLPEFILKEDRSFSTY 118
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + F +IV++ +H+ R +L
Sbjct: 119 ENLLNVKRIMNRRGFKSAIIVSNMFHLERAYL 150
>gi|296132533|ref|YP_003639780.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296031111|gb|ADG81879.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 239
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 34 HPSVSAIVV-----LTGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQ 81
P+ AIV+ G R+ EL + +KI ++G H + D + ++
Sbjct: 61 PPATVAIVLGAKVYPNGGVSTVLADRLNTGVELYKAGKVKKILLTGDHGQTNYDEVNTMR 120
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ +R+ + I + + +T + A ++VT +H+PR
Sbjct: 121 EFMLRKGIPAEDIFMDHAGFSTYDSMYRARDVFR---VKDAVVVTQQFHLPRALY 172
>gi|301383268|ref|ZP_07231686.1| hypothetical protein PsyrptM_11552 [Pseudomonas syringae pv. tomato
Max13]
gi|302062492|ref|ZP_07254033.1| hypothetical protein PsyrptK_21113 [Pseudomonas syringae pv. tomato
K40]
gi|302133475|ref|ZP_07259465.1| hypothetical protein PsyrptN_18884 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 189
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++RA EL I +SG V + + R L I + + T
Sbjct: 55 QARLDRAVELYRQGRVRNIIVSGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTT 114
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A+ ++ ++ F ++VT +H+ R+ L +
Sbjct: 115 KDTARNSAQIMKQRGFKSAVVVTQYFHITRSRYALYQAG 153
>gi|264678457|ref|YP_003278364.1| hypothetical protein CtCNB1_2322 [Comamonas testosteroni CNB-2]
gi|262208970|gb|ACY33068.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 270
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 64/188 (34%), Gaps = 21/188 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGE----------PIR 49
+ W +V L +++ F + + P V +IVVL R
Sbjct: 75 QRLWSLGWVVLALWLISLFWFWSRLSGLGLAPQQVPPVQSIVVLGSGTLDGHPRPVLAAR 134
Query: 50 IERAFELLE-NQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEG 105
+++A +L + GV + + + + +A + + + +TE
Sbjct: 135 LDQAAQLAKLQPQALVAVCGGVDWGEKESEAEVMARYLQQHHGIAAQRLVLEKLSTSTEL 194
Query: 106 NAQEASAWAEKNNFHH---VLIVTHDYHMPRTF-LELQRINSTVQFIPYPIISHDLEENS 161
N + + + + +V+ D+H+ R + ++ V + P N+
Sbjct: 195 NLKLSRPLLAERGVTADAPMAMVSSDFHLMRAMDIAKRQDLPQVYPVAAP-TPLATRFNA 253
Query: 162 SIFKIKIL 169
+ + +
Sbjct: 254 WLREYFAM 261
>gi|16801598|ref|NP_471866.1| hypothetical protein lin2536 [Listeria innocua Clip11262]
gi|16415058|emb|CAC97763.1| lin2536 [Listeria innocua Clip11262]
Length = 189
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP--------I 48
+R+ + + + +I FI I +V+ +++L G+P
Sbjct: 2 LRFKKFFVILIVIGFIYVLIVAAFMFSGTRAKPDENVNTVLILGAKINGDPATPSLVLEE 61
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L K+ +SG S ++ ++++ + + +A I K+ TE
Sbjct: 62 RLDTAVAYLNEYPKAKVIVSGGQGADESTTEAAVMEEYLVNEGIARNRIKKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + ++ K + +IVT DYHM R +
Sbjct: 122 NIKYSNE---KFDLGKTVIVTSDYHMYRALM 149
>gi|254520411|ref|ZP_05132467.1| exported protein [Clostridium sp. 7_2_43FAA]
gi|226914160|gb|EEH99361.1| exported protein [Clostridium sp. 7_2_43FAA]
Length = 217
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 38 SAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIP 84
AI+VL R+E + E E +G +SG H + + ++K
Sbjct: 40 DAIIVLGAGVRADGTPSDILADRLETSLEAFEAGLGNTFLLSGDHGREEYNEVGSMKKYI 99
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
++ D+ E I + + +T A + +IVT++YH+PR I
Sbjct: 100 LQNDIDEKIIFMDHAGFSTYDTMYRAKEIFK---VDKAIIVTNEYHLPRAL----YIARK 152
Query: 145 VQFIPYPIISHD 156
+ Y I S
Sbjct: 153 LGIDAYGINSDK 164
>gi|224541249|ref|ZP_03681788.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
gi|224525894|gb|EEF94999.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
Length = 405
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 48 IRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R++ + + + ++G + +V++ L+ + ++Q L + + +A +
Sbjct: 124 GRLQTGLAIAKEYPKSYVVVTGGGTAKNNPNVTEGGLMGEWLLKQGLEPSRLIVENRAQD 183
Query: 103 TEGNAQEASAWAEKN--NFHHVLIVTHDYHMPR 133
T GNA+ + + +V++VT DYH+ R
Sbjct: 184 TVGNAKNTYEVLKTKYPSVKNVVLVTSDYHVTR 216
>gi|319652939|ref|ZP_08007044.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
gi|317395288|gb|EFV76021.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
Length = 199
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 49 RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L + K+ SG H +++ +L K I + + I +L+T+
Sbjct: 46 RLPEAIRLYQKGRANKLLFSGGVRWSGHELTEAEMLMKKAIGFGIPPKDLFIENISLHTK 105
Query: 105 GNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD---L 157
N + ++ N +++IVT +HM R + L ++I Y ++ D
Sbjct: 106 ENVLASMLVMDRMCGLENISNIIIVTAPFHMRRLHMTLLTYMP--KWIHYSLVCSDDGAT 163
Query: 158 EENSSIFKIKILRVLLIE------YLK 178
+ + + E Y+K
Sbjct: 164 GKEQWMQDPYGRKRAFDEARKIIDYVK 190
>gi|209809049|ref|YP_002264587.1| hypothetical protein VSAL_II0237 [Aliivibrio salmonicida LFI1238]
gi|208010611|emb|CAQ80991.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 210
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 21/156 (13%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQ 87
AI VL +R+ E A +L + + SG ++ +
Sbjct: 24 KSDAIFVLCSYDLRVAEHAAQLYLDGFAPLVIFSGAQGRATEGLFTLSEAETFANVAKDM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFL--------- 136
+ I + KA NT N ++ N +L+V Y M R L
Sbjct: 84 GVPSSAILLETKATNTGENIFFTQDLLKEKNITLNSLLLVQKPY-MERRLLATFLKNWND 142
Query: 137 -ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
E + ++F+ YP + +SI ++ R+
Sbjct: 143 IEFCISSPNIRFVDYPTDEVTFDHVASIILGELHRL 178
>gi|288958654|ref|YP_003448995.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
gi|288910962|dbj|BAI72451.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
Length = 264
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 28/134 (20%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
+ F V++ HP A V TG +LL + +D+
Sbjct: 111 LGFADLVRR-----HPEAKA--VFTGGSG------QLLA-------------PDLKEDVT 144
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + + + ++ NT NA + +++T HMPR+ +
Sbjct: 145 ARAALAQAGIPADRVLYEAESRNTWENAVFSKEMVRPRPGERWILITSAMHMPRSVGIFR 204
Query: 140 RINSTVQFIPYPII 153
+ V+ PYP+
Sbjct: 205 EVGWPVE--PYPVD 216
>gi|158321219|ref|YP_001513726.1| hypothetical protein Clos_2195 [Alkaliphilus oremlandii OhILAs]
gi|158141418|gb|ABW19730.1| protein of unknown function DUF218 [Alkaliphilus oremlandii OhILAs]
Length = 191
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 15/150 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIR 49
M+ +CL + I + I+VL G R
Sbjct: 1 MKLKKLIPILCLFGISIFTIIQFFIIIIPFRLAPVQSDVIIVL-GARLYGDKPSPMLQYR 59
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+E+ L + I +SG +++ + ++ + + E I + +T N
Sbjct: 60 LEKTLTLYNEGFADTIIVSGARGDDELITEALAMKIYLMNNGVPESAILEEDHSYSTYEN 119
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++A ++ + +IV++ +HM R +
Sbjct: 120 LSYSNAIMKEKDLKSAIIVSNSFHMSRALM 149
>gi|293607329|ref|ZP_06689669.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814279|gb|EFF73420.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 184
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 33 DHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISG-VHH-SVSKDIL 79
+VL TG+P R++RA++ +F+SG V + +
Sbjct: 27 RARPADVAIVLGNTVLPTGQPSPRLAARLDRAYDCYAAMQCRLVFVSGGVDPAGADEAAV 86
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ I + + I N+ A+ ASA+ ++ + L+VT +H+PRT L L+
Sbjct: 87 MRDYLIARGVPAERIVTDSAGDNSWATARHASAYMREHGYTRALVVTQYFHVPRTVLALR 146
Query: 140 R 140
R
Sbjct: 147 R 147
>gi|197337877|ref|YP_002158482.1| hypothetical protein VFMJ11_A0934 [Vibrio fischeri MJ11]
gi|197315129|gb|ACH64578.1| conserved hypothetical protein [Vibrio fischeri MJ11]
Length = 217
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 53/157 (33%), Gaps = 21/157 (13%)
Query: 35 PSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIR 86
AI VL +R+ E A +L + + SG ++ +
Sbjct: 23 RKSDAIFVLCSYDLRVAEHAAQLYLDGYAPLLIFSGAQGRATEGLFTLSEAETFANVAKD 82
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFL-------- 136
+ I + KA NT N A ++ N +L+V Y M R L
Sbjct: 83 MGVPSSAIIVETKATNTGENIFFTQALLKEKNISISSLLLVQKPY-MERRLLATFLKNWN 141
Query: 137 --ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
E + + FI YP + +SI ++ R+
Sbjct: 142 DIEFCISSPNISFINYPTDEITFDHIASIILGELHRL 178
>gi|291296072|ref|YP_003507470.1| hypothetical protein Mrub_1689 [Meiothermus ruber DSM 1279]
gi|290471031|gb|ADD28450.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 176
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 34/154 (22%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
MR +W L+F +G + F + IVVL G R
Sbjct: 1 MRVWW-----ALVFVAVGLVFFS---PKASPGTLQKADWIVVL-GAAQYNGEPSVIFRNR 51
Query: 50 IERAFELLENQIGEKIFISGV-HHSVSKDIL------LQKIPIRQDLAECCIDIGYKALN 102
+E A L + +I ++G L+ + C ++
Sbjct: 52 LEAALRLYQQGYAPRIAVTGGRAPGDRYSEGGVGCSYLEAKGVPPAALYC----EQQSRR 107
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T N + K ++IVT + H+PR +
Sbjct: 108 TVENLTNIAPVVGK---SRLIIVTDEPHLPRALI 138
>gi|269213925|ref|ZP_05983151.2| putative periplasmic protein [Neisseria cinerea ATCC 14685]
gi|269145137|gb|EEZ71555.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
Length = 181
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 15/117 (12%)
Query: 32 PDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHS---VSKD 77
P A +VL G RI A L + KI +G +++
Sbjct: 10 PAGTRADAALVL-GAAAWDKRPSPVFRERINHAIALYQGHRVGKIIFTGGRSKKGYMTEA 68
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++ ++Q + I + NT N + N V+IV+ YH+ R
Sbjct: 69 EVGRRYALKQGVPAHNILFENTSRNTYENLNNIRPILQANGISSVVIVSDPYHLARA 125
>gi|213966760|ref|ZP_03394911.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213928610|gb|EEB62154.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 166
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++RA EL I +SG V + + R L I + + T
Sbjct: 32 QARLDRAVELYRQGRVRNIIVSGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTT 91
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A+ ++ ++ F ++VT +H+ R+ L +
Sbjct: 92 KDTARNSAQIMKQRGFKSAVVVTQYFHITRSRYALYQAG 130
>gi|254436861|ref|ZP_05050355.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252307|gb|EDY76621.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 221
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 16/153 (10%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIE 51
+ + + + +++ Q + AIV L G R+E
Sbjct: 9 RLFKFAILAFVLMTLSILAWTFMWPQPELRALQPADAIVCLGGGMNANGALSAPTLTRVE 68
Query: 52 RAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQ--DLAECCIDIGYKALNTEGNAQ 108
R +L E + I S G+ Q I L + I A +T NA
Sbjct: 69 RCVQLFEAGLAPVIVFSGGIARPNGPSAGRQMGRIAMTLGLPQNAIVQEGLAQSTLQNAL 128
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ N ++IVT +H+PR++ +
Sbjct: 129 FSLPLIP--NAERIIIVTEAFHLPRSWASFRWA 159
>gi|113866057|ref|YP_724546.1| hypothetical protein H16_A0026 [Ralstonia eutropha H16]
gi|113524833|emb|CAJ91178.1| hypothetical integral membrane protein [Ralstonia eutropha H16]
Length = 253
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 19/153 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMH---IPDHPSVSAIVVLTGEP----------I 48
+ W ++ ++ F + + IP V AIV+L
Sbjct: 58 QQLWQAAWIAFALWLATVAIFFYNIHRSTEAAIPGSSPVKAIVILGSGTPNCVASPTLVA 117
Query: 49 RIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+++ + + K+ +SG + ++ + I + +A + ++ +TE
Sbjct: 118 RLDQGLKQAQRWPQAKVAVSGGQDFGLRCREADIMAEYLIDRGVAADRVVREGRSTSTEE 177
Query: 106 NAQEASAWAEKNNF---HHVLIVTHDYHMPRTF 135
N + E+ +++VT D+H+ R
Sbjct: 178 NLLFSRRLLEEQGIAATDPIVVVTSDFHVRRAV 210
>gi|332293547|ref|YP_004432156.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
gi|332171633|gb|AEE20888.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
Length = 222
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 23/148 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDH-------PSVSAIVVL-----------TGEPIRI 50
V +I I G + +V++ P ++VL T R+
Sbjct: 13 LVGIILLICGVYALSYHVEESTKSQTFTNISQVPKAYTVIVLGASVRANGNLSTMLEDRV 72
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A L + ++ +SG + + S + ++ + + + E I + Y +T +
Sbjct: 73 SSALSLYKEGKVKRFLLSGDNGTASYNEPKAMKAYLMDKGVPEDDIFLDYAGFDTYDSMY 132
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFL 136
AS+ N ++VT ++H+PR
Sbjct: 133 RASS---VFNVKEAVVVTQEFHLPRALY 157
>gi|121727926|ref|ZP_01680974.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675084|ref|YP_001217265.1| hypothetical protein VC0395_A1321 [Vibrio cholerae O395]
gi|121629776|gb|EAX62192.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146316967|gb|ABQ21506.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013622|gb|ACP09832.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 282
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 62/158 (39%), Gaps = 19/158 (12%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 117 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIIQPW 229
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQTAS 194
I R L E L ++ +++ +++ ++
Sbjct: 230 DKYIPRSRYLEQTEQYWHETLGLMWQTLRDTVAGDSSE 267
>gi|323343494|ref|ZP_08083721.1| membrane protein SanA [Prevotella oralis ATCC 33269]
gi|323095313|gb|EFZ37887.1| membrane protein SanA [Prevotella oralis ATCC 33269]
Length = 219
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 19/156 (12%)
Query: 44 TGEPI-----RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDI 96
TG P RI+ EL + +I ISG + S + + ++ + Q + + I +
Sbjct: 66 TGAPNPYYTARIDATAELYRSGKISRILISGANPSETYNEPEQMKADLMAQGVPDSVIYL 125
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
Y L T + A H I++ +H R L R + I + +
Sbjct: 126 DYAGLRTLDSVVRAKEIF---GLHTFTIISQQFHNERALY-LSRA-EGIDAIAF---NAG 177
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
+N R+ EYL I L + Q
Sbjct: 178 DFQNRWW----QFRMKCREYLARTKAHIDLLVGLQP 209
>gi|255764508|ref|YP_003065363.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254547859|gb|ACT57423.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 48/225 (21%)
Query: 2 RYFWYGLFVCLIFFIMGF----------ISFIRYVKQMHIPDHPSVSAIVVLTGE----- 46
+ F+ F+ L FI G+ + F + + IV+L
Sbjct: 22 KIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
Query: 47 -------------PIRIERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDL 89
RI L ++ + ISG K L + I L
Sbjct: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKL 138
Query: 90 AECCID-----IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
E ++ + ++L+T NAQ +S+ + ++++V+ YH+ R+ L Q
Sbjct: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
Query: 145 VQFIPYPIISHDLEENSSIFKIKI----LRVLLIEYLKILLLSIQ 185
+ S L SI + + L EY+ IL+ +
Sbjct: 199 TK----ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
>gi|228474759|ref|ZP_04059490.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|228271422|gb|EEK12790.1| conserved hypothetical protein [Staphylococcus hominis SK119]
Length = 185
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + + I +SG V+ + + ++K I+ + E I + +T
Sbjct: 51 RLATCLKAKKQNEKAYIIVSGGRPVNGNTQANE-MKKWLIQHCVKEKDIITEQNSSDTIE 109
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
NA E A+K F+ + ++T H+ R L ++++ ++
Sbjct: 110 NAIETLKIADKRGFNSLSLITSGDHVRRATLIFEKLDKNIKV 151
>gi|188586776|ref|YP_001918321.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351463|gb|ACB85733.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 194
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGEPI-----RIERAFEL 56
+ + + +I ++ F + + + +AIV V G+P R+ A +
Sbjct: 6 FLIPLAVIIMLIIFAAIRIWTFGAQNELVDADAAIVLGAAVWDGQPSPVFEERLNHAIWI 65
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
EN+ +K+ ++G ++ + + I+ + + I I K+ TE N + A
Sbjct: 66 YENEYVDKLILTGGKAEDTDRAESQVAKDYAIKNQVQKDDILIETKSSITEENFKYAQEI 125
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A ++ ++V+ HM R + V P P
Sbjct: 126 AAEHELESFIVVSDPLHMRRAITIAETKGMDVYPSPTP 163
>gi|168234855|ref|ZP_02659913.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734850|ref|YP_002113116.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194710352|gb|ACF89573.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291873|gb|EDY31223.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 206
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQIQRQQQWRTALLVSDPLHMLR----LKTIAQDNG 158
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S K R LL E Y LL
Sbjct: 159 IDSRSSPTRSTRYKSWWAK---TRFLLRETFYYSGYRLLR 195
>gi|255327628|ref|ZP_05368694.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
gi|255295302|gb|EET74653.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
Length = 387
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 22/152 (14%)
Query: 3 YFWYGLFVC-LIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
YF++ L + + +GF +S + + +VVL RI
Sbjct: 167 YFYFSLVLTYFTIYAVGFTVSAVLNLVNFR----QQADYVVVLGSGLIGDQVTPLLAGRI 222
Query: 51 ERAFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+R E+ G K+ +S G V + + + + + + + E I + +A+NT N
Sbjct: 223 DRGIEIYRKNPGSKLIMSGGQGADEEVPEGVAMTRYAVSRGIPETDIIVEDRAVNTRENL 282
Query: 108 QEASAW---AEKNNFHHVLIVTHDYHMPRTFL 136
+ A + V + T YH+ R L
Sbjct: 283 LFSYALMPEVAEGKTPKVAVATTSYHLFRALL 314
>gi|289625792|ref|ZP_06458746.1| hypothetical protein PsyrpaN_11816 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648423|ref|ZP_06479766.1| hypothetical protein Psyrpa2_11824 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330867188|gb|EGH01897.1| hypothetical protein PSYAE_08002 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871076|gb|EGH05785.1| hypothetical protein PSYAE_28243 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 256
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 56/184 (30%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L F +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIMAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D G A T NA +A ++ V++VT +HM R ++ TV
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQQLGIKRVVLVTQAWHMQRARWSFEKAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|126737417|ref|ZP_01753152.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
gi|126722002|gb|EBA18705.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
Length = 197
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 14/117 (11%)
Query: 39 AIV----VLTGEPI------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPI 85
AI+ V G R L + ++ SG H S+ ++++I +
Sbjct: 39 AIILGAAVWPGGEASPTLRRRTLHGVALFKAGKISQLICSGGLGKHPP-SEAAVMREICL 97
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ L I + ++ +T N A A E ++IVT YH R L + +
Sbjct: 98 AEGLPTDAILLEDRSHSTLENLTNAKALIEDPETTDIVIVTDHYHKWRALLTARHLG 154
>gi|170702081|ref|ZP_02892995.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170133010|gb|EDT01424.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 224
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVL--------TG 45
R + +F+++ + + +HP + ++ L TG
Sbjct: 6 RRRQIAIAGVAVFWLLATGWLAAPLIAWTEAGVTPVEHPDMHGRTTLITLGIGTRRGETG 65
Query: 46 ------EPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAEC 92
RI + L Q + + +SG ++ + + + + +A
Sbjct: 66 LRAPPDGEARIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAVYGRRLVAEGVAPG 125
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ + ++V Y M R L+ + P P+
Sbjct: 126 DLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFRHFGID----PQPV 181
Query: 153 ISHDLEENSSI 163
S+
Sbjct: 182 YSNRRRAQLGW 192
>gi|78061607|ref|YP_371515.1| hypothetical protein Bcep18194_B0757 [Burkholderia sp. 383]
gi|77969492|gb|ABB10871.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 207
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 75/216 (34%), Gaps = 34/216 (15%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEPIRI 50
L V +I ++ + Y M +P P+ A++ VL R+
Sbjct: 1 MGRLLAVIACLWIAAAVALVAY--GMRMPSEPADVAVIFGNALDEAGAPKPVL---AARL 55
Query: 51 ERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ +SG +++ ++ + + + I + + NT AQ
Sbjct: 56 DVGVRCYRTGQCPAFLVSGAIDGPGLNEATAMRDYLVARGVPADRITVDDQGDNTLATAQ 115
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN---STVQFIPYPIISHDLEENSSIFK 165
A+ + + VLIV+ YH+ R L +R+ + + YP + SS +
Sbjct: 116 HTLAYLQAHRQSRVLIVSQYYHLARARLAFERVGIARADIS-AAYPRRFQLRDVYSSWRE 174
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ + +++L ++ F ++
Sbjct: 175 VPA----------YAVYAVRLWVNPDARPVSFRPML 200
>gi|197302961|ref|ZP_03168011.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
gi|197297956|gb|EDY32506.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
Length = 244
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 19/124 (15%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---H 71
+M+ P + I+VL R+++A E L K +SG +
Sbjct: 85 SKMNTEGKPGLDYIIVL--GAQVYERGPSAVLRFRLDKAVEYLNENPQTKCIVSGGKGSN 142
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
S+ ++K IRQ + E I K+ T N Q + + + V IVT+++HM
Sbjct: 143 EPCSEAEGMEKYLIRQGIPEERILKEEKSKTTAENIQYSKKFIKSKE--SVGIVTNNFHM 200
Query: 132 PRTF 135
R
Sbjct: 201 FRAL 204
>gi|172063895|ref|YP_001811546.1| hypothetical protein BamMC406_4882 [Burkholderia ambifaria MC40-6]
gi|171996412|gb|ACB67330.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 219
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 32/218 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEP 47
M L +I+ + + M +P P+ A++ VL
Sbjct: 10 MARIGRVLAAFACLWIVAAVVLVG--AGMRMPSEPADVAVIFGNALDDHGAPKPVL---A 64
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ +SG +++ ++ + + + I + + NT
Sbjct: 65 ARLDVGVRCYREGQCPAFLVSGAIDGPGLNEATAMRDYLVARGVPAERIAVDDQGDNTLA 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQF-IPYPIISHDLEENSSI 163
AQ A+ + + VLI++ YH+ R L +R+ + YP + SS
Sbjct: 125 TAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERVGIAGANISAAYPHHFQLRDIYSSW 184
Query: 164 FKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
++ + ++L L+ F ++
Sbjct: 185 REVPA----------YAVYVLRLWLNPDARPVSFRPML 212
>gi|229529254|ref|ZP_04418644.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
gi|229333028|gb|EEN98514.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
Length = 282
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 117 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIIQPW 229
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQT-ASQFFITLIEE 203
I R L E L ++ +++ +++ + ++EE
Sbjct: 230 DKYIPRSRYLEQTEQYWHETLGLMWQTLRDTVAGDSGEPVLTPPMVEE 277
>gi|159482172|ref|XP_001699147.1| hypothetical protein CHLREDRAFT_185300 [Chlamydomonas reinhardtii]
gi|158273210|gb|EDO99002.1| predicted protein [Chlamydomonas reinhardtii]
Length = 312
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 35/152 (23%)
Query: 31 IPDHPSVSAIVVLTGEP-----------IRIERAFEL--LENQIGEKIFISG-------- 69
H +V AIVVL G R++ A L L+ + + + G
Sbjct: 84 PEAHRTVDAIVVLAGGQTGPDSVPAWVERRLDTALSLQRLQRRPVPILSLGGGTPHKGPF 143
Query: 70 -------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW-AEKNNFHH 121
+H S + LQ L + + +T GNA + A +
Sbjct: 144 LDERGFVIHESTACARYLQDRGADPSLLLKEV----SSYDTVGNAYFSLTIHALPAGWRR 199
Query: 122 VLIVTHDYHMPRTFLELQRI--NSTVQFIPYP 151
+ +VT D+HMPRT + + + P
Sbjct: 200 LAVVTSDFHMPRTASLFHAMYGLAGRELFADP 231
>gi|326563988|gb|EGE14237.1| hypothetical protein E9K_05094 [Moraxella catarrhalis 103P14B1]
gi|326569481|gb|EGE19541.1| hypothetical protein E9U_07596 [Moraxella catarrhalis BC8]
gi|326577008|gb|EGE26903.1| hypothetical protein E9Y_00691 [Moraxella catarrhalis 101P30B1]
gi|326577466|gb|EGE27350.1| hypothetical protein EA1_03565 [Moraxella catarrhalis O35E]
Length = 252
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 34/204 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PIRIERA 53
+ IF +G Y ++IVVL G R A
Sbjct: 40 ALTPIFANLGVGLLNLYSALTLATVQDDATSIVVLGGGLTKNSAGTISLNHFTQSRANAA 99
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L I SG +D L++ I + + ++NT NA +
Sbjct: 100 IHL-HKLYPLSIITSGAESPWLRDYLIEHIGRTKVVIIN----ENASMNTCENAVFTAKL 154
Query: 114 AEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI---- 168
+ V +VT YHM R + + + IP P L SS K
Sbjct: 155 LSHHELSTTVYLVTDRYHMARARRQFAKA--GIHTIPAP---APLAIRSSWQNPKDNLIH 209
Query: 169 LRVLLIEYLKILLLSIQLSLSTQT 192
R + E L+ + ++ QT
Sbjct: 210 TRRTIYE----LVALARDIITPQT 229
>gi|206564007|ref|YP_002234770.1| hypothetical protein BCAM2170 [Burkholderia cenocepacia J2315]
gi|198040047|emb|CAR56028.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 219
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 24/190 (12%)
Query: 26 VKQMHIPDHPSVSAIV---VL--TGEP-----IRIERAFELLENQIGEKIFISGV--HHS 73
V M +P P+ A++ L TG P R++ +SG
Sbjct: 33 VHGMRMPSDPADVAVIFGNALDETGAPKPVLAARLDVGVRCYRAGQCPAFLVSGAIDGPG 92
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+++ ++ + + + I + + NT AQ A+ + VLIV+ YH+ R
Sbjct: 93 LNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLRTHRLSRVLIVSQYYHLAR 152
Query: 134 TFLELQRINSTVQFI--PYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
L +R+ I YP + SS ++ + +++L ++
Sbjct: 153 ARLAFERVGIARSTISAAYPRRFQWRDVYSSWREVPA----------YAVYAVRLWVNPD 202
Query: 192 TASQFFITLI 201
F ++
Sbjct: 203 ARPVSFRPML 212
>gi|326561612|gb|EGE11950.1| hypothetical protein E9M_05753 [Moraxella catarrhalis 46P47B1]
gi|326567638|gb|EGE17746.1| hypothetical protein E9O_00430 [Moraxella catarrhalis 12P80B1]
gi|326574024|gb|EGE23973.1| hypothetical protein E9W_05894 [Moraxella catarrhalis CO72]
Length = 252
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 34/204 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PIRIERA 53
+ IF +G Y ++IVVL G R A
Sbjct: 40 ALTPIFANLGVGLLNLYSALTLATVQDDATSIVVLGGGLTKNSAGTISLNHFTQSRANAA 99
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L I SG +D L++ I + + ++NT NA +
Sbjct: 100 IHL-HKLYPLSIITSGAESPWLRDYLIEHIGRTKVVIIN----ENASMNTCENAVFTAKL 154
Query: 114 AEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI---- 168
+ V +VT YHM R + + + IP P L SS K
Sbjct: 155 LSHHELSTTVYLVTDRYHMARARRQFAKA--GIHTIPAP---APLAIRSSWQNPKDNLIH 209
Query: 169 LRVLLIEYLKILLLSIQLSLSTQT 192
R + E L+ + ++ QT
Sbjct: 210 TRRTIYE----LVALARDIITPQT 229
>gi|256003507|ref|ZP_05428497.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|255992531|gb|EEU02623.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941425|gb|ADU75459.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 262
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 24/172 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGE----------PIR 49
+R ++G LI F F+ + + + V +V+L R
Sbjct: 70 LRRLFFG---ALIAFAGSFVLILGLIFASSDTDKNVEVDYLVILGAGLKGDRITPTFQYR 126
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+++ E L K+ ++G +++ +++ + + E I + +A +T N
Sbjct: 127 LDKGVEYLRANPELKVVVTGGQGPGEDLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNEN 186
Query: 107 AQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + ++ ++IVT+D+HM R + + F PY I
Sbjct: 187 MKYTAEVLKQLTGRSDYRIMIVTNDFHMFRAKI----LARHNGFTPYGITVP 234
>gi|167035834|ref|YP_001671065.1| hypothetical protein PputGB1_4845 [Pseudomonas putida GB-1]
gi|166862322|gb|ABZ00730.1| protein of unknown function DUF218 [Pseudomonas putida GB-1]
Length = 253
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 21/136 (15%)
Query: 36 SVSAIVVLTGEPIRIE---------RAFEL--------LENQIGEKIFISGV-HHSVSKD 77
AIVVL R + A L L G + SG H+
Sbjct: 79 RADAIVVLGAGRERGDPAWGGSDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPPS 138
Query: 78 ILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Q+ + +A T NAQ + + V++VT +HM R+
Sbjct: 139 EARLMADRLQEDFAVAVKWREEASRTTWENAQLTAKVLQPLGIRRVVLVTQAWHMQRSRW 198
Query: 137 ELQRINSTVQFIPYPI 152
++ + +P P+
Sbjct: 199 SFEQA--GFEVVPAPV 212
>gi|313617350|gb|EFR89766.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
Length = 189
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 22/151 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEPI 48
+ F+ L V +++ +F+ + ++ + I+ VL
Sbjct: 5 KKFFVILIVIGFIYVLIVAAFMFSGTRAKPDENVNTVLILGAKINGDPATPSLVL---EE 61
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L K+ +SG S ++ ++++ + + +A I K+ TE
Sbjct: 62 RLDTAVAYLNEYPKAKVIVSGGQGADESTTEAAVMEEYLVNEGIARNRIKKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + ++ K + +IVT DYHM R +
Sbjct: 122 NIKYSNE---KFDLGKTVIVTSDYHMYRALM 149
>gi|317153120|ref|YP_004121168.1| hypothetical protein Daes_1408 [Desulfovibrio aespoeensis Aspo-2]
gi|316943371|gb|ADU62422.1| protein of unknown function DUF218 [Desulfovibrio aespoeensis
Aspo-2]
Length = 218
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 21/195 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + L I I +++ P I+ L G+ R+ +A EL
Sbjct: 9 LRLVGAATLIGLAVGIALLIGAGYWMRVNDAP--RQADYIIPLAGDSGRLIKAAELYHQG 66
Query: 61 IGEKIFIS--------GVH--------HSVSKDI-LLQKIPIRQDLAECCIDIGYKALNT 103
I +S G+ ++ +D ++ + + A GY ++T
Sbjct: 67 FAPVILLSNSVELPVTGLDRLRWEIGFPNLDRDEYHMRLLTVLGAQASVAGSFGYGHVST 126
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
A+ + + +L+VT H R + + I + +
Sbjct: 127 VEEAEALREYLKGKPAR-LLLVTSPTHARRAKMIFEDILPHCEITMVATDEGGFGTD-WW 184
Query: 164 FKIKILRVLLIEYLK 178
+ L++E+ K
Sbjct: 185 KDQYAAQNLVLEFAK 199
>gi|307946395|ref|ZP_07661730.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307770059|gb|EFO29285.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 267
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 52/233 (22%)
Query: 11 CLIFFIMGFISF---------IRYVKQM--HIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
++ +GF +F ++ ++ D + I+VL G + LL +
Sbjct: 41 LVLLSFLGFFAFGLGPLGNILMQPLEDRFQTPEDVGQIDGIIVLGGAIDTVVTNTRLLTS 100
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQ----------------------------DLAE 91
+ L ++ P + +
Sbjct: 101 ------INTAAERVTVVAQLAREHPKAEVIHSGGEGLLLGSGTSEAEGVLPLFLSFGIER 154
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
I + +A NT NA E L+VT YHMPR+ + +PYP
Sbjct: 155 ERIILEDQARNTWENATLTKEQLEPIEGQRWLLVTSAYHMPRSVGVFEAAG-WTGIVPYP 213
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ--LSLSTQTASQFFITLIE 202
+ + V L E LK ++++ + L A+ L
Sbjct: 214 VD----QRTRGPQDAGRWFVGLAEGLKRTDVAVKEWIGLVAYYATGRSTALFP 262
>gi|307592076|ref|YP_003899667.1| hypothetical protein Cyan7822_5740 [Cyanothece sp. PCC 7822]
gi|306985721|gb|ADN17601.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 205
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 10/176 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F Y + I + F + P A +L G+ R E EL +
Sbjct: 9 IRRFIYLTSLSFIVLWIS--LFPIRLMTAFKQA-PQPQAFFILGGDFRREEVVAELAKWY 65
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+I++S ++ L Q + L I +A++T N A +K +
Sbjct: 66 PSLEIWVSSGPNTQKTKELFQMAGVPPRLLH----IDARAIDTVTNFTSLVADFKKKHIQ 121
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
H+ +VT DYHMPR + + + F P + S S + ++ + +
Sbjct: 122 HLYLVTSDYHMPRAIAIGIIVLGSQGIVFTPLSVHSEQ-PSESWLRILRDIGRAFL 176
>gi|170761647|ref|YP_001788140.1| hypothetical protein CLK_2209 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408636|gb|ACA57047.1| putative membrane protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 351
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I ++IP I++L RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYIPKRKKYDYIIILGSGLIGDRVPPLLAGRIDKGIEIYK 195
Query: 57 --LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI +G +S+ + + K + + + I KA+NT N +
Sbjct: 196 KQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSR 255
Query: 112 AW------AEKNNFHHVLIVTHDYHMPRTFL 136
A + + ++VT+++H+ R+ +
Sbjct: 256 KLLEEDYKAREKEYR-CIVVTNNFHLFRSLI 285
>gi|330814246|ref|YP_004358485.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487341|gb|AEA81746.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 247
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 34 HPSVSAIVVLTGEPIRIERAFEL---LENQIGEKIFISG------VHHSVSKDILLQKIP 84
+ I V +G RI +A + + + ++ SG + + +Q I
Sbjct: 78 PNHIDYIFVPSGSRERIVQAINIKNNYLPKKVQILYSSGNTSLDTKNKENPESEFVQTII 137
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ + I A NT N ++ + VL+VT +HM R+ +
Sbjct: 138 SNSNIEKKDIIFLPSARNTIENFKQLKFFLTNKKNKKVLLVTSAFHMKRSLM 189
>gi|298291473|ref|YP_003693412.1| hypothetical protein Snov_1483 [Starkeya novella DSM 506]
gi|296927984|gb|ADH88793.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 274
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 32/186 (17%)
Query: 29 MHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGVH 71
++ + V ++VL G R+ EL G +I +G
Sbjct: 70 AYVDEGSPVDGVIVLGGAELAGITAARGQSSFQEAGERMLAMGELARRYPGARIVFAGGS 129
Query: 72 HSV------SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++ + +++ + + ++ + NT NA+ A + L+V
Sbjct: 130 SNLVEASPMQEADVVRLALPQIGVDPARVEFERYSRNTAENARLARELVKPQPDQRWLLV 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR-------VLLIEYLK 178
T +HMPR + IPYP+ + + + E++
Sbjct: 190 TSAFHMPRAIGCFRAA--GFPVIPYPVDYRTIGRPELFRLFGTVADGLSFVDLATREWMG 247
Query: 179 ILLLSI 184
++ +
Sbjct: 248 LVAYYL 253
>gi|257455873|ref|ZP_05621092.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257446721|gb|EEV21745.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 225
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 38/204 (18%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PI 48
F+ LF ++ FI+ + + + +P+ AIVVL G
Sbjct: 36 FFTPLFSTIVLFILD----CYRLPESAVSVNPAT-AIVVLGGGLTNNQQNEIVINQFTES 90
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R+ +A ++ + G I +SG + + K ++ + + + NT NA+
Sbjct: 91 RLIKASQVYQQ-TGLPIIVSG-----KEAPWMAKWLQKKGIMW--VLAEKNSFNTCQNAK 142
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP-YPIISHDLEENSSIFKIK 167
+ N V++VT YHM R+ + + V IP + + ++
Sbjct: 143 YTAEMV---NVKQVILVTDAYHMNRSRRQF--AINDVATIPSIAPLPKANDWQHFDQNLQ 197
Query: 168 ILRVLLIEYLKILLLSIQLSLSTQ 191
R L E LL + + Q
Sbjct: 198 HSRRALYE----LLAFARDLVKPQ 217
>gi|325122581|gb|ADY82104.1| hypothetical protein BDGL_001518 [Acinetobacter calcoaceticus
PHEA-2]
Length = 374
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 43/192 (22%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 190 VEYVRKKPLPVQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNGYTRLRLEKTLEVEKQNHL 249
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEKNN- 118
+ SGV ++ L E +D + +++NT N + +S +K
Sbjct: 250 PIVL-SGVE----------APYMQAWLKERGVDAKLLEKRSMNTCENTRFSSLLLQKKGG 298
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEY 176
V++VT +YHMPRT + ++ IP P+ + S R E
Sbjct: 299 APTVMLVTDEYHMPRTRRLF--ALNGIETIPVVAPMPTPLTRWQPSGQNYDHSRRANYE- 355
Query: 177 LKILLLSIQLSL 188
LL +I+ L
Sbjct: 356 ---LLATIRDML 364
>gi|83745961|ref|ZP_00943017.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|83727355|gb|EAP74477.1| Integral membrane protein [Ralstonia solanacearum UW551]
Length = 265
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 35/192 (18%)
Query: 2 RYFWYGLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIE 51
R GL V + + + ++ +AIV+L R++
Sbjct: 36 RRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAVAWGKRNAIVLLGAGTRRVD 95
Query: 52 RAF--------ELLENQIGE----------KIFISGV---HHSVSKDILLQKIPIRQDLA 90
L+E KI +SG HH + + ++ +
Sbjct: 96 GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGID 155
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + ++NT NAQ + A ++V+ H+ R+ L P
Sbjct: 156 AGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFG----MTPT 211
Query: 151 PIISHDLEENSS 162
P+ + DL+ S
Sbjct: 212 PVRADDLQATPS 223
>gi|296112949|ref|YP_003626887.1| hypothetical protein MCR_0726 [Moraxella catarrhalis RH4]
gi|295920643|gb|ADG60994.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
Length = 235
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 34/204 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PIRIERA 53
+ IF +G Y ++IVVL G R A
Sbjct: 23 ALTPIFANLGVGLLNLYSALTLATVQDDATSIVVLGGGLTKNSAGTISLNHFTQSRANAA 82
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L I SG +D L++ I + + ++NT NA +
Sbjct: 83 IHL-HKLYPLSIITSGAESPWLRDYLIEHIGRTKVVIIN----ENASMNTCENAVFTAKL 137
Query: 114 AEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI---- 168
+ V +VT YHM R + + + IP P L SS K
Sbjct: 138 LSHHELSTTVYLVTDRYHMARARRQFAKA--GIHTIPAP---APLAIRSSWQNPKDNLIH 192
Query: 169 LRVLLIEYLKILLLSIQLSLSTQT 192
R + E L+ + ++ QT
Sbjct: 193 TRRTIYE----LVALARDIITPQT 212
>gi|282857535|ref|ZP_06266763.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584622|gb|EFB89962.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 259
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-VLTGEP--------------IRIERA 53
F C F ++F+ + + A+V VL G R+ +A
Sbjct: 54 FSCTDFCGKKMLAFLEALTPEARGERRGRPAVVLVLGGGAVAEGQTYQPSVSSQRRLRKA 113
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
E+L K+ +SG+ + L +P + + + ++LNTEGN +E++
Sbjct: 114 REILSCCGDGKLLLSGIESPLMARWLRASLPREK------VLLETRSLNTEGNLRESAVL 167
Query: 114 AEK-----NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
+ + V +VT +HM R + ++ + +P P + +
Sbjct: 168 LRRLYSDERSRPQVFLVTDRFHMARAWRWAKKFMPDFEVVPSP-APSLVRDAPW 220
>gi|124024346|ref|YP_001018653.1| hypothetical protein P9303_26581 [Prochlorococcus marinus str. MIT
9303]
gi|123964632|gb|ABM79388.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT
9303]
Length = 213
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSA-----IVVLTGEPIRIERAFELLENQIGEKIFIS 68
++G + ++ + + I+VL G+ R L + + + +S
Sbjct: 10 IVVVGLLFWLIAAGPLRPYRQALTNGKPPQLILVLGGDVDREHLGIRLARD-LNLPLVVS 68
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G + L++++ I + + Y+A +T GN + HVL+VT +
Sbjct: 69 GGSNLEYAQWLVREVGIPPSQ----VQLDYRAKDTLGNFTSLVDELQLKGIQHVLLVTSE 124
Query: 129 YHMPRTFL 136
H+PR+
Sbjct: 125 DHLPRSMA 132
>gi|255744859|ref|ZP_05418809.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262161858|ref|ZP_06030876.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262189661|ref|ZP_06048039.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|255737330|gb|EET92725.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262028590|gb|EEY47245.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262034459|gb|EEY52821.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|327484319|gb|AEA78726.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae LMA3894-4]
Length = 273
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HM R E + + IP P
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESA--GLTPIPAP 207
>gi|78066102|ref|YP_368871.1| hypothetical protein Bcep18194_A4631 [Burkholderia sp. 383]
gi|77966847|gb|ABB08227.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 224
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 33/191 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHP----SVSAIVVLTG------- 45
R + +F+++ + + +HP + I++ G
Sbjct: 6 RRRIISIAAIALFWLLATGWLAAPLIAWTESGVAPVEHPEMHGRTTLILIGAGTKRTDFG 65
Query: 46 ------EPIRIERAFELLE--NQIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAEC 92
RI + L Q+ E+ + +SG ++ + + + + +A
Sbjct: 66 LQPPPDGTARIHKVAALYRTCRQLAERCTVVMSGGDPQHHGETEAAVYGRQLVAEGIAPT 125
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ + + T NA+ ++ ++VT Y M R L+ +R P P+
Sbjct: 126 DLVLEPDSRTTYENAKFTASILRSQYDDARILVTSSYQMRRALLDFRRFGID----PQPV 181
Query: 153 ISHDLEENSSI 163
++ +
Sbjct: 182 YANRRRAQTGW 192
>gi|207742020|ref|YP_002258412.1| lipoprotein [Ralstonia solanacearum IPO1609]
gi|206593406|emb|CAQ60333.1| lipoprotein [Ralstonia solanacearum IPO1609]
Length = 251
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 35/192 (18%)
Query: 2 RYFWYGLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIE 51
R GL V + + + ++ +AIV+L R++
Sbjct: 22 RRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAVAWGKRNAIVLLGAGTRRVD 81
Query: 52 RAF--------ELLENQIGE----------KIFISGV---HHSVSKDILLQKIPIRQDLA 90
L+E KI +SG HH + + ++ +
Sbjct: 82 GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGID 141
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + ++NT NAQ + A ++V+ H+ R+ L P
Sbjct: 142 AGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFG----MTPT 197
Query: 151 PIISHDLEENSS 162
P+ + DL+ S
Sbjct: 198 PVRADDLQATPS 209
>gi|169795635|ref|YP_001713428.1| hypothetical protein ABAYE1527 [Acinetobacter baumannii AYE]
gi|213158421|ref|YP_002319719.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|215483123|ref|YP_002325330.1| hypothetical protein ABBFA_001427 [Acinetobacter baumannii
AB307-0294]
gi|301346826|ref|ZP_07227567.1| hypothetical protein AbauAB0_11281 [Acinetobacter baumannii AB056]
gi|301510634|ref|ZP_07235871.1| hypothetical protein AbauAB05_03624 [Acinetobacter baumannii AB058]
gi|301594655|ref|ZP_07239663.1| hypothetical protein AbauAB059_02560 [Acinetobacter baumannii
AB059]
gi|332850908|ref|ZP_08433061.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332871353|ref|ZP_08439897.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
gi|169148562|emb|CAM86428.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057581|gb|ACJ42483.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|213988727|gb|ACJ59026.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332730343|gb|EGJ61665.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332731543|gb|EGJ62830.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
Length = 374
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 190 VEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKKNHL 249
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+ + L + +++NT N + +S +K
Sbjct: 250 PIVL-SGVE-APYMQAWLKARGVDAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 301
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + S R E
Sbjct: 302 VMLVTDEYHMPRTRRLF--ALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYE---- 355
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 356 LLATIRDML 364
>gi|148380781|ref|YP_001255322.1| hypothetical protein CBO2822 [Clostridium botulinum A str. ATCC
3502]
gi|153934201|ref|YP_001385066.1| hypothetical protein CLB_2765 [Clostridium botulinum A str. ATCC
19397]
gi|153935183|ref|YP_001388535.1| hypothetical protein CLC_2698 [Clostridium botulinum A str. Hall]
gi|148290265|emb|CAL84385.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152930245|gb|ABS35745.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397]
gi|152931097|gb|ABS36596.1| putative membrane protein [Clostridium botulinum A str. Hall]
Length = 351
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K + + + I KA+NT N +
Sbjct: 196 KQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSR 255
Query: 112 AWA------EKNNFHHVLIVTHDYHMPRTFL 136
+ + ++VT+++H+ R+ +
Sbjct: 256 KLLEEDYKTREKEYR-CIVVTNNFHLFRSLI 285
>gi|239630563|ref|ZP_04673594.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301067717|ref|YP_003789740.1| hypothetical protein LCAZH_2704 [Lactobacillus casei str. Zhang]
gi|239526846|gb|EEQ65847.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300440124|gb|ADK19890.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 360
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ +++ + NT N
Sbjct: 207 RLEIALKAAKKYPKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVEN 266
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + ++T HM R FL + V
Sbjct: 267 ALFSVRELVDRGATSATLITSATHMRRAFLLYRMAGDIV 305
>gi|116805286|gb|ABK27699.1| hypothetical protein [Lactobacillus paracasei]
Length = 363
Score = 55.6 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ +++ + NT N
Sbjct: 210 RLEIALKAAKKYPKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVEN 269
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + ++T HM R FL + V
Sbjct: 270 ALFSVRELVDRGATSATLITSATHMRRAFLLYRMAGDIV 308
>gi|326572756|gb|EGE22742.1| hypothetical protein E9S_00375 [Moraxella catarrhalis BC7]
Length = 252
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 62/204 (30%), Gaps = 34/204 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PIRIERA 53
+ IF +G Y ++IVVL G R A
Sbjct: 40 ALTPIFANLGVGLLNLYSALTLATVQDDATSIVVLGGGLTKNSAGTISLNHFTQSRANAA 99
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L I SG +D L + I + + ++NT NA +
Sbjct: 100 IHL-HKLYPLSIITSGAESPWLRDYLTEHIGRTKVVIIN----ENASMNTCENAVFTAKL 154
Query: 114 AEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI---- 168
+ V +VT YHM R + + + IP P L SS K
Sbjct: 155 LSHHELSTTVYLVTDRYHMARARRQFAKA--GIHTIPAP---APLAIRSSWQNPKDNLIH 209
Query: 169 LRVLLIEYLKILLLSIQLSLSTQT 192
R + E L+ + ++ QT
Sbjct: 210 TRRTIYE----LVALARDIITPQT 229
>gi|184158561|ref|YP_001846900.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|239501574|ref|ZP_04660884.1| hypothetical protein AbauAB_04621 [Acinetobacter baumannii AB900]
gi|332875330|ref|ZP_08443159.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
gi|183210155|gb|ACC57553.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|323518483|gb|ADX92864.1| hypothetical protein ABTW07_2440 [Acinetobacter baumannii
TCDC-AB0715]
gi|332736434|gb|EGJ67432.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
Length = 376
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 192 VEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKKNHL 251
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+ + L + +++NT N + +S +K
Sbjct: 252 PIVL-SGVE-APYMQAWLKARGVDAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 303
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + S R E
Sbjct: 304 VMLVTDEYHMPRTRRLF--ALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYE---- 357
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 358 LLATIRDML 366
>gi|134096504|ref|YP_001101579.1| hypothetical protein HEAR3355 [Herminiimonas arsenicoxydans]
gi|133740407|emb|CAL63458.1| Conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 256
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 70/219 (31%), Gaps = 33/219 (15%)
Query: 2 RYFWYGLFVCLIFFIM--------GFISFIRYVKQMHIP----DHPSVSAIVVLTGEP-- 47
R+ GL + + IM G F+ +++M+ P AIVVL G
Sbjct: 34 RWPRGGLTLSVAALIMLTVLSTRMGASLFVHPLEKMNPPLLSAKAAGAQAIVVLGGGRIS 93
Query: 48 -------IRIERAFEL--------LENQIGEKIFISGVHH-SVSKDILLQKIPIRQDLAE 91
I A L L+ + G + +SG S+ + D
Sbjct: 94 NAPEYGGQDIPAAITLQRLRYAAKLQRETGLPLLVSGGRPDGASESEAAGMARVLLDDFS 153
Query: 92 CCIDIGYK-ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + + NT NAQ +S +L+VT HM R + Q+ V
Sbjct: 154 VPVKWQEEMSNNTAENAQFSSRVLRAAGVQRILLVTDAIHMQRAKIAFQQAGLQVVPAAT 213
Query: 151 PIISHDLEENS--SIFKIKILRVLLIEYLKILLLSIQLS 187
S + + L E+L + ++
Sbjct: 214 LFTSAARVTLPDFLPTSLHMASYALREWLGLAWYCLRHR 252
>gi|169633752|ref|YP_001707488.1| hypothetical protein ABSDF2200 [Acinetobacter baumannii SDF]
gi|169152544|emb|CAP01524.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 376
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 192 VEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKKNHL 251
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+ + L + +++NT N + +S +K
Sbjct: 252 PIVL-SGVE-APYMQAWLKARGVDAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 303
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + S R E
Sbjct: 304 VMLVTDEYHMPRTRRLF--ALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYE---- 357
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 358 LLATIRDML 366
>gi|15641722|ref|NP_231354.1| hypothetical protein VC1718 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585785|ref|ZP_01675579.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153212106|ref|ZP_01947923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817128|ref|ZP_01969795.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823662|ref|ZP_01976329.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825454|ref|ZP_01978121.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153827934|ref|ZP_01980601.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081867|ref|YP_002810418.1| hypothetical protein VCM66_1658 [Vibrio cholerae M66-2]
gi|229508174|ref|ZP_04397679.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229511588|ref|ZP_04401067.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229515111|ref|ZP_04404571.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229518727|ref|ZP_04408170.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229520681|ref|ZP_04410104.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229607747|ref|YP_002878395.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254224867|ref|ZP_04918482.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285337|ref|ZP_04960302.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848836|ref|ZP_05238186.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297579300|ref|ZP_06941228.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498204|ref|ZP_07008011.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656238|gb|AAF94868.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549923|gb|EAX59941.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124116902|gb|EAY35722.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622555|gb|EAZ50874.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512277|gb|EAZ74871.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518811|gb|EAZ76034.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876515|gb|EDL74650.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740866|gb|EDM54951.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424609|gb|EDN16545.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009755|gb|ACP05967.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229342236|gb|EEO07231.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229343416|gb|EEO08391.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229347816|gb|EEO12775.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229351553|gb|EEO16494.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229355679|gb|EEO20600.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229370402|gb|ACQ60825.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254844541|gb|EET22955.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536894|gb|EFH75727.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542537|gb|EFH78587.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 282
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 117 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HM R E + + IP P
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESA--GLTPIPAP 216
>gi|322507673|gb|ADX03127.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
Length = 376
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
+ YV++ +P P AIVVL G +R+E+ E+ +
Sbjct: 192 VEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLEKTLEVEKKNHL 251
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L+ + L + +++NT N + +S +K
Sbjct: 252 PIVL-SGVE-APYMQAWLKARGVDAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 303
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + S R E
Sbjct: 304 VMLVTDEYHMPRTRRLF--ALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYE---- 357
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 358 LLATIRDML 366
>gi|148358637|ref|YP_001249844.1| hypothetical protein LPC_0513 [Legionella pneumophila str. Corby]
gi|148280410|gb|ABQ54498.1| conserved hypothetical protein; DUF218 [Legionella pneumophila str.
Corby]
Length = 250
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 27/159 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHI---PDHPSVSAIVVLTGEPI-------- 48
+ + + + L+ G++ ++ + +P+V +VVL G
Sbjct: 39 KVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKQVNPNVKWVVVLGGGQNIGEGMPAN 98
Query: 49 ---------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIG 97
R+ L K+ +SG + + L + + + I
Sbjct: 99 DLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELTSWFAIDSKKVVIE 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++NT A+E +A F +VT HMPR+
Sbjct: 159 TASINTADQARELAAIVHDQPF---YLVTSAIHMPRSMA 194
>gi|71737332|ref|YP_276508.1| hypothetical protein PSPPH_4392 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557885|gb|AAZ37096.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322689|gb|EFW78782.1| hypothetical protein PsgB076_22227 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330526|gb|EFW86505.1| hypothetical protein PsgRace4_08395 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 256
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L F +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIMAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D G A T NA +A + V++VT +HM R ++ TV
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEKAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|251789903|ref|YP_003004624.1| hypothetical protein Dd1591_2303 [Dickeya zeae Ech1591]
gi|247538524|gb|ACT07145.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 258
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 46/142 (32%), Gaps = 27/142 (19%)
Query: 31 IPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV--- 70
P+ P V+ IVVL G R+ L G K+ +G
Sbjct: 74 TPEFPKVNYIVVLGGGYTFNPDWPPSANLINNSLARVTEGIRLWRANPGAKLIFTGAAAR 133
Query: 71 -HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ S + + I + +A +TE A A K F L+VT
Sbjct: 134 SNPVTSASTSARVAE-SLGVPAQDILLVDQARDTEEEAAGTEALIGKQPF---LLVTSAS 189
Query: 130 HMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 HLPRAIRFFQA--RGLHPIPAP 209
>gi|171317689|ref|ZP_02906873.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171097164|gb|EDT42015.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 219
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 72/216 (33%), Gaps = 28/216 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEP 47
+ L +I+ + + M +P P+ A++ VL
Sbjct: 10 VARIGRVLAAFACLWIVAAVVLVG--AGMRMPSEPADVAVIFGNALDDHGAPKPVL---A 64
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ + +SG +++ ++ + + I + + NT
Sbjct: 65 ARLDVGVRCYRDGQCPAFLVSGAIDGPGLNEATAMRDYLVAHGVPAGRIAVDDQGDNTLA 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ A A+ + + VLI++ YH+ R L +R+ I IS +
Sbjct: 125 TAQHARAYLQAHRMSRVLIISQYYHLARARLAFERVG-----IARANISAAYPHHFQWRD 179
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
I + Y + ++L L+ F ++
Sbjct: 180 IYSSWREVPAYAIYV---LRLWLNPDARPVSFRPML 212
>gi|17233190|ref|NP_490280.1| hypothetical protein all7174 [Nostoc sp. PCC 7120]
gi|17135712|dbj|BAB78258.1| all7174 [Nostoc sp. PCC 7120]
Length = 180
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 10/140 (7%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIG--EKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
P AI+ L G + E L + SG+ + I
Sbjct: 47 PQPQAILTLGGGADK-EEFTALFAQFYPDIKIWVSSGIEPQ-QARAIFHAAGITDSQFH- 103
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPY 150
+ Y+A +T N ++ + H+ ++T +HMPR L + + F
Sbjct: 104 ---LDYRATDTVTNFTSLVEDFQQQHIKHIFLITSKFHMPRAKAIATLVLGSRGISFTSI 160
Query: 151 PIISHDLEENSSIFKIKILR 170
+ S S+ R
Sbjct: 161 SVPSRATRAESTSPTPCGSR 180
>gi|148549869|ref|YP_001269971.1| hypothetical protein Pput_4667 [Pseudomonas putida F1]
gi|148513927|gb|ABQ80787.1| protein of unknown function DUF218 [Pseudomonas putida F1]
Length = 253
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 21/137 (15%)
Query: 35 PSVSAIVVLTGEPIRIE---------RAFEL--------LENQIGEKIFISGV-HHSVSK 76
AIVVL R + A L L G + SG H+
Sbjct: 78 NRADAIVVLGAGRERGDPAWGGSDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPP 137
Query: 77 DILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + +A T NAQ + + F V++VT +HM R+
Sbjct: 138 SEARLMAERLHEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSR 197
Query: 136 LELQRINSTVQFIPYPI 152
+ + + +P P+
Sbjct: 198 WSFE--MAGFEVVPAPV 212
>gi|110834807|ref|YP_693666.1| hypothetical protein ABO_1946 [Alcanivorax borkumensis SK2]
gi|110647918|emb|CAL17394.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 203
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 29/205 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL--------------TGEPIR 49
Y + L+ + + + A+VVL T R
Sbjct: 3 LTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGLRR 62
Query: 50 IERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
++ A EL G + +SG ++ L+ + +R + +++ NT
Sbjct: 63 LKLAAELAHE-HGLPLLVSGGGQPPKHDDEPTEADLMAEQALR-RWPRLDVIKEFRSRNT 120
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
NA +S VL+V+ H+PR L Q + S L + +
Sbjct: 121 WENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQG----VLAQAAWSKRLPKQEWL 176
Query: 164 FKIKILRV---LLIEYLKILLLSIQ 185
+ + + E+L ++ +
Sbjct: 177 PSAGAISMVPEIWYEWLALVWYHAR 201
>gi|113954722|ref|YP_731790.1| hypothetical protein sync_2602 [Synechococcus sp. CC9311]
gi|113882073|gb|ABI47031.1| Uncharacterized conserved protein [Synechococcus sp. CC9311]
Length = 195
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ 81
F + + P I+VL G+ R L Q+ + +SG S Q
Sbjct: 27 FREALTTVEPPQR-----ILVLGGDLDRERVGLRL-AQQLELPLVVSGG----SNPEYAQ 76
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQ 139
+ L + + + Y+A +T N +++ H+ +VT + H+PR L
Sbjct: 77 WLVRDAGLDQSRVVLDYRAKDTFTNFTSLVDDLKRDGVKHIYLVTSEDHLPRAMTVGRLV 136
Query: 140 RINSTVQFIPYPI 152
+ ++ P+
Sbjct: 137 AGSRGIRLTGVPV 149
>gi|240948368|ref|ZP_04752754.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
gi|240297407|gb|EER47948.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
Length = 247
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 30/136 (22%)
Query: 28 QMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV 70
+ + D+ AIVVL G R+ A L + I +G
Sbjct: 70 TLTLQDYRQAQAIVVLGGGLRDSNELYGKLTVTNNELERMRYAAYLHKETQLP-ILATGS 128
Query: 71 HH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ Q + I +A T+ NA +K + +++
Sbjct: 129 APNGNSEAEIIAKEFKQFFDVPTKW------IESQAKTTKENALYTKDILKKEGINTIVL 182
Query: 125 VTHDYHMPRTFLELQR 140
VT ++HM R L ++
Sbjct: 183 VTQNWHMQRAKLLFEQ 198
>gi|78183885|ref|YP_376319.1| hypothetical protein Syncc9902_0303 [Synechococcus sp. CC9902]
gi|78168179|gb|ABB25276.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 191
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 10/165 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L V L +++G Y + + + + ++VL G+ R L Q+ + +
Sbjct: 10 LGVALTVWLLGPGPMAPY--RRALLNRSAPQMVLVLGGDVDRERMGARL-ARQLDLPLLV 66
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + LLQ+ + + + + Y+A +T N + + HVL+VT
Sbjct: 67 SGGSNREYATWLLQEERLNPE----RVTLDYRARDTLSNFTSLVDELQSDGIQHVLLVTS 122
Query: 128 DYHMPRTFL--ELQRINSTVQFIPYPII-SHDLEENSSIFKIKIL 169
+ H+ R+ ++ + + P+ S D +E I +I
Sbjct: 123 EDHLARSMAVGQVVAGSRGIHLTGVPVACSPDCDEEGRIKQISDW 167
>gi|313500771|gb|ADR62137.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 253
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 21/137 (15%)
Query: 35 PSVSAIVVLTGEPIRIE---------RAFEL--------LENQIGEKIFISGV-HHSVSK 76
AIVVL R + A L L G + SG H+
Sbjct: 78 RRADAIVVLGAGRERGDPAWGGGDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPP 137
Query: 77 DILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + +A T NAQ + + F V++VT +HM R+
Sbjct: 138 SEARLMAERLHEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSR 197
Query: 136 LELQRINSTVQFIPYPI 152
++ + +P P+
Sbjct: 198 WSFEQA--GFEVVPAPV 212
>gi|207727627|ref|YP_002256021.1| lipoprotein [Ralstonia solanacearum MolK2]
gi|206590866|emb|CAQ56478.1| lipoprotein [Ralstonia solanacearum MolK2]
Length = 251
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 35/192 (18%)
Query: 2 RYFWYGLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIE 51
R GL V + + + ++ +AIV+L R++
Sbjct: 22 RRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAVAWGKRNAIVLLGAGTRRVD 81
Query: 52 RAF--------ELLENQIGE----------KIFISGV---HHSVSKDILLQKIPIRQDLA 90
L+E KI +SG HH + + ++ +
Sbjct: 82 GGVEPGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGID 141
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + ++NT NAQ + A ++V+ H+ R+ L P
Sbjct: 142 AGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFG----MTPT 197
Query: 151 PIISHDLEENSS 162
P+ + DL+ S
Sbjct: 198 PVRADDLQATPS 209
>gi|296446397|ref|ZP_06888341.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296256032|gb|EFH03115.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 265
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 43/151 (28%), Gaps = 24/151 (15%)
Query: 39 AIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHSVSKDIL-- 79
IVVL G R+ EL ++ SG S+++
Sbjct: 81 GIVVLGGAMDEHITAARGRAAFNEAGERLLAFVELARRYPQARLVFSGGSASLTEARFTE 140
Query: 80 ---LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LA + ++ NT NA A + L+VT HMPR
Sbjct: 141 ADAAAVFFREAGLAPERVLYENRSRNTWENAVYTRDLARPASSERWLLVTSAAHMPRAMG 200
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+++ +P+ +
Sbjct: 201 IFRQV--GFPATAFPVDYRTTGHIGWSLRPD 229
>gi|330873571|gb|EGH07720.1| hypothetical protein PSYMP_04175 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 256
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 40/210 (19%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPS-------VSAIVVL---------------- 43
GL++ + ++ F R ++Q+ AIV+L
Sbjct: 45 GLWLMSLPVVVEFA--ARKMEQIPPLPQQQWATLAQQADAIVLLGNGRERNSPTWGADTP 102
Query: 44 TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK--- 99
TG R+ A L + + G+H Q + + ++
Sbjct: 103 TGLGLERLRLAARLAKESGLPILTTGGLHFDQPPSEASIMAQALQQDFG--VTVRWQEGL 160
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI----ISH 155
+ T NA +A E V++VT +HMPR ++ + P+ + +
Sbjct: 161 SRTTWENATMTAAVLEPQGIKRVVLVTQAWHMPRARWSFEQA--GFTVVGAPVGFLGVDN 218
Query: 156 DLEENSSIFKIK---ILRVLLIEYLKILLL 182
+ + + VLL E +L+
Sbjct: 219 ARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|255068087|ref|ZP_05319942.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047685|gb|EET43149.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 195
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 21/166 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEP------------ 47
R+ GL L+ + Q I V+ G
Sbjct: 3 RWIIGGLIPLLLIWETSVAWLHYQAVQAEKASQNIKPAD-IAVILGNSVNRRGKPNPCLR 61
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E L + +SG ++ +Q + I + I I K+ +T
Sbjct: 62 SRVEAGVALYRQNKVSGLLMSGGTDGDGSNEAAAMQSMAIDMGIPPEHIRIENKSESTFE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIP 149
N ++ + +V+IV+ +H+ R + VQF
Sbjct: 122 NIALSAPLL--QDVSNVIIVSDAFHLARAEWLVNRHLKGKNVQFYA 165
>gi|162449133|ref|YP_001611500.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
gi|161159715|emb|CAN91020.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 5/119 (4%)
Query: 46 EPIRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
R A + + +SG + + + + I + ++ +
Sbjct: 110 GLERGLAAVRVYREYGFGHVIVSGKDVRGAPTQLASAMADLLVELGVPRKKIILETESRD 169
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA ++ A + V++VT HMPR+ +R V +P P+ L
Sbjct: 170 TRENALHSTRIARGLSADAVVVVTSALHMPRSLRMFERAGLDV--LPAPVRFQSLPPEG 226
>gi|158424456|ref|YP_001525748.1| hypothetical protein AZC_2832 [Azorhizobium caulinodans ORS 571]
gi|158331345|dbj|BAF88830.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 271
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 7/137 (5%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV-----HHSVSKDILL 80
+ +P+ V + L R+ L K+ SG + +
Sbjct: 87 LGGAEVPEVSVVRGVTALNDAAERVLAFAALARRYPQAKLVFSGGSGEYDESMPAAQDAV 146
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ L + ++ NT NA E L+VT +HMPR +
Sbjct: 147 RLAFADVGLDVTRVIYERRSRNTAQNAVETRKLITPVPGERWLLVTSAFHMPRAIGCFRE 206
Query: 141 INSTVQFIPYPIISHDL 157
+ V YP+ L
Sbjct: 207 VGFPVT--AYPVDYRTL 221
>gi|323435882|ref|ZP_01048691.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|321496197|gb|EAQ39925.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 207
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 17/152 (11%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMH-IPDHPSVSAIVVL-----------TGEPIRIERAF 54
L C IF + G + + + I + P ++VL T R+ A
Sbjct: 2 ALLACGIFILSGHVKSSTKNQTYNNIAEVPQAYTVIVLGASVRSNGDLSTMLEDRVSSAL 61
Query: 55 ELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + +SG + + S + +Q+ I Q + E I + Y +T + AS+
Sbjct: 62 SLYRAGKVSRFLLSGDNGTKSYNEPKAMQQYLINQGVPEEDIFLDYAGFDTYDSMYRASS 121
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
N ++VT +H+PR R+
Sbjct: 122 ---VFNVKEAIVVTQKFHLPRALFIANRLGLD 150
>gi|325068099|ref|ZP_08126772.1| hypothetical protein AoriK_09771 [Actinomyces oris K20]
Length = 219
Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + E + +SG + D +++ + + + E I + Y +T
Sbjct: 62 AHRLDAAAELYTSGRVEAVLVSGDNRRAGYDEPTVMRSYLLSRGIPEQAIALDYAGFDTY 121
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-IISHDLEENSSI 163
A L+VT D+H PR + + V + S + S
Sbjct: 122 DTCVRARRIF---GIERALLVTQDFHEPRAVAICRSVGLDVDGVGDSRARSDRIGWAVSW 178
Query: 164 FKIKILRV 171
+ + +
Sbjct: 179 TRERAAAI 186
>gi|228990732|ref|ZP_04150697.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
gi|228769258|gb|EEM17856.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
Length = 193
Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 10 VCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEPI------------RIERAFE 55
+ +I I+G+I F++Y K H+ +++L RI++A E
Sbjct: 12 LVVIMIIVGYIGFLQYNIYKHGHMEAPNDADYMILL--GAKVKGTEPSYSLQYRIDKAAE 69
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L+ + +SG +S+ ++K + Q +AE I + ++ NT+ N + + +
Sbjct: 70 YLKTHEQTIVIVSGGKGKGEDISEARAMKKGLMTQSIAEQRIIMEDRSTNTDENIEFSKS 129
Query: 113 WAEKNNFHHVLIVTHDYHMPRT 134
N ++ VT+D+HM R
Sbjct: 130 LIPANKKKGMI-VTNDFHMFRA 150
>gi|220929859|ref|YP_002506768.1| hypothetical protein Ccel_2459 [Clostridium cellulolyticum H10]
gi|220000187|gb|ACL76788.1| protein of unknown function DUF218 [Clostridium cellulolyticum H10]
Length = 256
Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 28/183 (15%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGE----------PIRIERAFELLEN 59
+ +++ FI + IPD V +++VL R++ E +
Sbjct: 74 LFLVWLVSFIIITAIIITSAIPDKEQQVDSVIVLGAGLKGETPTLVLKKRLDYTLEYYKL 133
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+I +SG ++++ +++ ++ ++ E I ++ +T N Q + E
Sbjct: 134 NPDVRIIVSGGQGKGETITEAEAMKRYLVKHNIHENIILKEERSTSTYENMQYSKNLYEN 193
Query: 117 ---NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V+I+T+D+HM R + +R PY I S V L
Sbjct: 194 TMGKPLGKVMIITNDFHMFRAKILAKRAG----LKPYGISSG----TPWYLYPN---VCL 242
Query: 174 IEY 176
EY
Sbjct: 243 REY 245
>gi|28871767|ref|NP_794386.1| hypothetical protein PSPTO_4635 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855019|gb|AAO58081.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 189
Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++RA EL I +SG V + + R L I + + T
Sbjct: 55 QARLDRAVELYRQGRVRNIIVSGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTT 114
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A+ ++ ++ F ++VT +H+ R+ L +
Sbjct: 115 KDTARNSAQIMKQRGFKSAVVVTQYFHITRSRYALYQAG 153
>gi|330887933|gb|EGH20594.1| hypothetical protein PSYMO_03468 [Pseudomonas syringae pv. mori
str. 301020]
Length = 256
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L F +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPHLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIMAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D G A T NA +A + V++VT +HM R ++ TV
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEQAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|326561174|gb|EGE11539.1| hypothetical protein E9G_04999 [Moraxella catarrhalis 7169]
gi|326567938|gb|EGE18035.1| hypothetical protein E9Q_04434 [Moraxella catarrhalis BC1]
Length = 252
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 34/204 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------PIRIERA 53
+ IF +G Y ++IVVL G R A
Sbjct: 40 ALTPIFANLGVSLLNLYSALTLATVQDDATSIVVLGGGLTKNSAGTISLNHFTQSRANAA 99
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L I SG +D L++ I + + ++NT NA +
Sbjct: 100 IHL-HKLYPLSIITSGAESPWLRDYLIEHIGRTKVVIIN----ENASMNTCENAVFTAKL 154
Query: 114 AEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI---- 168
+ V +VT YHM R + + + IP P L SS K
Sbjct: 155 LSHHELSTTVYLVTDRYHMARARRQFAKA--GIHTIPAP---APLAIRSSWQNPKDNLIH 209
Query: 169 LRVLLIEYLKILLLSIQLSLSTQT 192
R + E L+ + ++ QT
Sbjct: 210 TRRTIYE----LVALARDIITPQT 229
>gi|291458721|ref|ZP_06598111.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418638|gb|EFE92357.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 382
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 14/147 (9%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ + F+M + H + IVVL RIER
Sbjct: 162 FGTLSFSAAYLLFLMAMYCLSALLNLFHPRKRRDLDYIVVLGAGIRGEAVTPLLASRIER 221
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
LL + +SG + + +++ + Q + I K+LNT N
Sbjct: 222 GIRLLYENPRALLILSGGQGEGEDIPEGEAMRRYALSQGVDPGRILTEEKSLNTRQNLLF 281
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +VT YH+ R L
Sbjct: 282 SRALMGGEKPK-IAVVTTSYHVFRALL 307
>gi|262171274|ref|ZP_06038952.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
gi|261892350|gb|EEY38336.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
Length = 277
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG S ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRISRMYPGSKMILSGYAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIAQPW 220
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQTAS 194
I R L E L +L ++ +++ +
Sbjct: 221 DKYIPKARYLEQTEQYWYETLGLLWQKLRDTVAGDVNT 258
>gi|253990291|ref|YP_003041647.1| hypothetical protein PAU_02815 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781741|emb|CAQ84904.1| similar to inner membrane protein ycbc of escherichia coli
[Photorhabdus asymbiotica]
Length = 278
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 24/137 (17%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSK 76
+P V IVVL G R+ L G K+ +G + SK
Sbjct: 82 NPPVDYIVVLGGGFTYNPNWAPSSNLLSNSLPRVTEGIRLYHLNPGSKMVFTGGKGTNSK 141
Query: 77 --DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + + ++TE A E K++F ++VT HM R
Sbjct: 142 SSAEVAAMVAQSLGVPAEDTIALTEPMDTEQEAHEVEKLIGKHSF---ILVTSANHMQRA 198
Query: 135 FLELQRINSTVQFIPYP 151
Q+ + IP P
Sbjct: 199 ITFFQQ--QGLNPIPGP 213
>gi|253688162|ref|YP_003017352.1| hypothetical protein PC1_1775 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754740|gb|ACT12816.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 282
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 49/172 (28%), Gaps = 30/172 (17%)
Query: 4 FWYGLFVCLIFFIMGFISF---IRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
W L + + + + Y P V IVVL G
Sbjct: 46 SWLALILLSLQPVADRLLLPLESHYPTWRQAPQANKVDYIVVLGGGYTYNAEWAPSSNLI 105
Query: 49 -----RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ L G K+ +G + VS + + + I I
Sbjct: 106 SNSLPRVTEGIRLYHANPGAKLIFTGGAAQGNP-VSSAKTAALVAESLGIPQQDIVILDT 164
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+TE A + F L+VT H+PR Q + IP P
Sbjct: 165 PRDTEEEAAATAKIVGDRPF---LLVTSANHLPRAIRFFQA--QGLAPIPAP 211
>gi|107025790|ref|YP_623301.1| hypothetical protein Bcen_3433 [Burkholderia cenocepacia AU 1054]
gi|116693029|ref|YP_838562.1| hypothetical protein Bcen2424_4935 [Burkholderia cenocepacia
HI2424]
gi|105895164|gb|ABF78328.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116651029|gb|ABK11669.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 230
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 26/191 (13%)
Query: 26 VKQMHIPDHPSVSAIV---VL--TGEP-----IRIERAFELLENQIGEKIFISGV--HHS 73
+ M +P +P+ A++ L TG P R++ +SG
Sbjct: 44 IHGMRMPSNPADVAVIFGNALDDTGAPKPVLAARLDVGVRCYRAGQCPAFLVSGAIDGPG 103
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+++ ++ + + + I + + NT AQ A+ + VLIV+ YH+ R
Sbjct: 104 LNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYHLAR 163
Query: 134 TFLELQRIN---STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
L +R+ S + YP + SS ++ + +++L ++
Sbjct: 164 ARLAFERVGIARSNIS-AAYPRRFQWRDVYSSWREVPA----------YAVYAVRLWVNP 212
Query: 191 QTASQFFITLI 201
F ++
Sbjct: 213 DARPVSFRPML 223
>gi|228991869|ref|ZP_04151805.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
gi|228997985|ref|ZP_04157586.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|229005536|ref|ZP_04163248.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228755723|gb|EEM05056.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228761718|gb|EEM10663.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|228767598|gb|EEM16225.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
Length = 218
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 17/160 (10%)
Query: 8 LFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+F+ ++ I+ F+S+ Y D A +VL G RI A
Sbjct: 24 VFLLMVSSIILFVSYAAYDIWSYRFKTDEVDTDAAIVL-GAASWNGKPSPVFRERINHAI 82
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + ++ ++ + I I ++ TE N + A
Sbjct: 83 SLYKNGSIKKIIFTGGTKFEAEQEEARTAKAYALKHNVKDEDILIETQSRFTEDNLKNAK 142
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
N H IV+ HM R + I P P
Sbjct: 143 QVGIDNGLHTYTIVSDPLHMKRAMRIAKHIGIDAYASPTP 182
>gi|218246780|ref|YP_002372151.1| hypothetical protein PCC8801_1957 [Cyanothece sp. PCC 8801]
gi|257059822|ref|YP_003137710.1| hypothetical protein Cyan8802_1984 [Cyanothece sp. PCC 8802]
gi|218167258|gb|ACK65995.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
gi|256589988|gb|ACV00875.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 200
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 15/175 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R V + ++ + V+ + AI VL G R A +L ++
Sbjct: 22 LRILPLIPVVGIAAWLG-----YKQVQSYRVKPE----AIFVLGGHEERERFAAQLAKDH 72
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S + K + +D + Y+A +T N +
Sbjct: 73 PTLPIWVSSGSPKGYAKRIFAKAGVERDRLH----LDYQAKDTVTNFTTLVNEFKAQGID 128
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V +VT H+PR + E+ + + P + E R LL
Sbjct: 129 SVYLVTSKNHLPRARVIGEIIFGSQGIVIKPMAVECDRPPEPWEKILRDGARSLL 183
>gi|258627463|ref|ZP_05722244.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580269|gb|EEW05237.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 287
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG S ++ ++ + + + I + A +T
Sbjct: 117 RLTEGIRISRMYPGSKMILSGYAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIAQPW 229
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQTAS 194
I R L E L +L ++ +++ +
Sbjct: 230 DKYIPKARYLEQTEQYWYETLGLLWQKLRDTVAGDVNT 267
>gi|228996828|ref|ZP_04156462.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
gi|229004505|ref|ZP_04162244.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228756696|gb|EEM06002.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228762889|gb|EEM11802.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
Length = 193
Score = 54.9 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 10 VCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEPI------------RIERAFE 55
+ +I I+G+I F++Y K H+ +++L RI++A E
Sbjct: 12 LVVIMIIVGYIGFLQYNIYKHGHMEAPNDADYMILL--GAKVKGTEPSYSLQYRIDKAAE 69
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L+ + +SG +S+ ++K ++Q +AE I + ++ NT+ N + + +
Sbjct: 70 YLKTHEQTIVIVSGGKGKGEDISEARAMKKGLMKQSIAEQRIIMEDRSTNTDENIEFSKS 129
Query: 113 WAEKNNFHHVLIVTHDYHMPRT 134
N ++ VT+D+HM R
Sbjct: 130 LIPANKKKGMI-VTNDFHMFRA 150
>gi|26991472|ref|NP_746897.1| hypothetical protein PP_4792 [Pseudomonas putida KT2440]
gi|24986550|gb|AAN70361.1|AE016678_2 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 253
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 21/136 (15%)
Query: 36 SVSAIVVLTGEPIRIE---------RAFEL--------LENQIGEKIFISGV-HHSVSKD 77
AIVVL R + A L L G + SG H+
Sbjct: 79 RADAIVVLGAGRERGDPAWGGGDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPPS 138
Query: 78 ILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + +A T NAQ + + F V++VT +HM R+
Sbjct: 139 EARLMAERLHEDFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRW 198
Query: 137 ELQRINSTVQFIPYPI 152
++ + +P P+
Sbjct: 199 SFEQA--GFEVVPAPV 212
>gi|167757814|ref|ZP_02429941.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
gi|167664468|gb|EDS08598.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
Length = 196
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGEPI-----RI 50
R W L + + F + K+ + VV G P R+
Sbjct: 7 RLLWITLGFAAANLALFGLMFRKPKKRWE---QDAYDCAVVCGCQVGADGTPSKRLAARV 63
Query: 51 ERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
E+A EL +++ + + +SG V+++ ++ +++ + + E I +A++T N
Sbjct: 64 EKAVELWKDKKVKYLIMSGAAVYNAFAEAPAMKRYAVELGVPEEYILEEKQAVSTYHNLL 123
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRT 134
AS E F ++VT+ +H+ +
Sbjct: 124 YASQMMEHCGFKDCVVVTNGWHLRKA 149
>gi|312870586|ref|ZP_07730701.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
gi|311093901|gb|EFQ52230.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
Length = 280
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGE----------PIRI 50
+ W + G I V + + HP +VVL R+
Sbjct: 71 QQLWLLVITTDSLATAGLIMMGLSVLLLRVWPHPRATDYLVVLGAGLTKGQVPPVLAARL 130
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A+ + + +SG V++ + R + I + +A NT N
Sbjct: 131 DSAYRFWKVHPETVVIVSGGDVHGDQVTQARAMADYLQRLGVVATKILLESQARNTWQNL 190
Query: 108 QEASAWAEKNNFH----HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ ++ V +VT +H+PR L R+ F+ P L N
Sbjct: 191 VNSRKLIAQHWHREGKPRVTVVTSSFHVPRAMLYTHRLGLNWHFLSAPTPWPYLPLNLVR 250
Query: 164 FKIKILR 170
+ I+R
Sbjct: 251 DYLGIIR 257
>gi|262165878|ref|ZP_06033615.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
gi|262025594|gb|EEY44262.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
Length = 278
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG S ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRISRMYPGSKMILSGYAGGSEFSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSS 162
A++A+A+ ++ +++VT HM R E + P P ++ L
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESAG----LTPIPAPTNYLGHLNIAQPW 220
Query: 163 IFKIKILRVL------LIEYLKILLLSIQLSLSTQTAS 194
I R L E L +L ++ +++ +
Sbjct: 221 DKYIPKARYLEQTEQYWYETLGLLWQKLRDTVAGDVNT 258
>gi|116496133|ref|YP_807867.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
gi|116106283|gb|ABJ71425.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
Length = 360
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ I++ + NT N
Sbjct: 207 RLEIALKAAKKYPKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVEN 266
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + ++T HM R FL + V
Sbjct: 267 ALFSVRELVDRGATSATLITSATHMRRAFLLYRMAGDIV 305
>gi|50843568|ref|YP_056795.1| OmpA family membrane associated protein [Propionibacterium acnes
KPA171202]
gi|50841170|gb|AAT83837.1| conserved membrane-associated protein (OmpA family)
[Propionibacterium acnes KPA171202]
Length = 228
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 29 AFVALLGPWTLAAALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 87
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG + + +++ + + + I + L T A
Sbjct: 88 YRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIF 147
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 148 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 195
>gi|298207824|ref|YP_003716003.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
gi|83850462|gb|EAP88330.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
Length = 219
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R++ A+EL ++ ++ +SG H + D + ++ + + + I + + +T
Sbjct: 68 KDRVDTAYELYKSGKAQRFLLSGDHGQDNYDEVNAMKDYLNAKGVPDEVIFLDHAGFDTY 127
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + K ++VT +H+PR
Sbjct: 128 D-SMYRAKYIFK--VDSAIVVTQQFHLPRALY 156
>gi|90577673|ref|ZP_01233484.1| hypothetical protein VAS14_11519 [Vibrio angustum S14]
gi|90440759|gb|EAS65939.1| hypothetical protein VAS14_11519 [Vibrio angustum S14]
Length = 221
Score = 54.9 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 13/140 (9%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-VHH------SVSKDILLQKIPIRQ 87
I VL R+ ERA EL + + I SG V + S+ KI +
Sbjct: 24 KSDCIFVLGSNDERVAERAVELYKKGVAPYIIFSGGVGELTEGLFNTSEAEHFAKIALDM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTV 145
+ + I I ++ NT N ++ ++V + RT ++ +
Sbjct: 84 GVPKEAILIEPESTNTGENVVFTRRLLQQKGLTPRSFILVQKPFMERRTLATFEQQWPNM 143
Query: 146 QFIPYPIISHDLEENSSIFK 165
Q I + S + +
Sbjct: 144 QAI---VTSPAIRFDDYAND 160
>gi|170737710|ref|YP_001778970.1| hypothetical protein Bcenmc03_5353 [Burkholderia cenocepacia MC0-3]
gi|169819898|gb|ACA94480.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 54.9 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 26/191 (13%)
Query: 26 VKQMHIPDHPSVSAIV---VL--TGEP-----IRIERAFELLENQIGEKIFISGV--HHS 73
+ M +P P+ A++ L TG P R++ +SG
Sbjct: 44 IHGMRMPSDPADVAVIFGNALDDTGAPKPVLAARLDVGVRCYRAGQCPAFLVSGAIDGPG 103
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+++ ++ + + + I + + NT AQ A+ + VLIV+ YH+ R
Sbjct: 104 LNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYHLAR 163
Query: 134 TFLELQRIN---STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
L +R+ S + YP + SS ++ + +++L ++
Sbjct: 164 ARLAFERVGIARSNIS-AAYPRRFQWRDVYSSWREVPA----------YAVYAVRLWVNP 212
Query: 191 QTASQFFITLI 201
F ++
Sbjct: 213 DARPVSFRPML 223
>gi|238911156|ref|ZP_04654993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 206
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 22/160 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + I I ++ T N + A + + L+V+ HM R L+ I
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLR----LKTIAQDNG 158
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLS 183
+ S K R LL E Y LL
Sbjct: 159 IDSRSSPTRSTCYKSWWAK---TRFLLRETFYYSGYRLLR 195
>gi|187778595|ref|ZP_02995068.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
gi|187772220|gb|EDU36022.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
Length = 351
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I ++P I+VL RI++ E+
Sbjct: 136 FLISYFFMMMFIFAISAAINTYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
LE KI +G +S+ + + K + + + I +A+NT N +
Sbjct: 196 NQLEKGHPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPNEHMIIEDQAVNTYENLSNSK 255
Query: 112 AWA------EKNNFHHVLIVTHDYHMPRTFL 136
+ + ++VT+++H+ R+ +
Sbjct: 256 KLLEEDYGTREKQYR-CIVVTNNFHLFRSLI 285
>gi|299769642|ref|YP_003731668.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
gi|298699730|gb|ADI90295.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
Length = 373
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 43/192 (22%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
I YV++ +P AIVVL G +R+E+ E+ +
Sbjct: 189 IEYVRKNPLPAPAKKLSQPYAIVVLGGGLTLDKNGKDIVVNGYTRLRLEKTLEVEKQNQL 248
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEKNN- 118
+ SGV ++ L E +D + +++NT N + +S +K
Sbjct: 249 PIVL-SGVE----------APYMQAWLKERGVDAKLLEKRSMNTCENTRFSSLLLQKKGG 297
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEY 176
V++VT +YHMPRT + ++ IP P+ + S+ R E
Sbjct: 298 APTVMLVTDEYHMPRTRRLF--ALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYE- 354
Query: 177 LKILLLSIQLSL 188
LL +I+ L
Sbjct: 355 ---LLATIRDML 363
>gi|254250125|ref|ZP_04943445.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
gi|124876626|gb|EAY66616.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
Length = 204
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 26/191 (13%)
Query: 26 VKQMHIPDHPSVSAIV---VL--TGEP-----IRIERAFELLENQIGEKIFISGV--HHS 73
+ M +P P+ A++ L TG P R++ +SG
Sbjct: 18 IHGMRMPSDPADVAVIFGNALDDTGAPKPVLAARLDVGVRCYHAGQCPAFLVSGAIDGPG 77
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+++ ++ + + + I + + NT AQ A+ + VLIV+ YH+ R
Sbjct: 78 LNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYHLAR 137
Query: 134 TFLELQRIN---STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
L +R+ S + YP + SS ++ + +++L ++
Sbjct: 138 ARLAFERVGIARSNIS-AAYPRRFQWRDVYSSWREVPA----------YAVYAVRLWVNP 186
Query: 191 QTASQFFITLI 201
F ++
Sbjct: 187 DARPVSFRPML 197
>gi|111019419|ref|YP_702391.1| hypothetical protein RHA1_ro02428 [Rhodococcus jostii RHA1]
gi|110818949|gb|ABG94233.1| possible membrane protein [Rhodococcus jostii RHA1]
Length = 222
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 17/152 (11%)
Query: 9 FVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGE----------PIRIERAFEL 56
+ ++ + R + D P ++VL + R++ A L
Sbjct: 19 ALAVLVVAASTVWISREASGHVYDVDDAPEAPVVIVLGAQVRDGKPREYLAGRLDVAVRL 78
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+++ + +SG S D + + + + I L+T +
Sbjct: 79 VQDGRARAVLVSGDGAGRSGDEIAAMTDYLVEKGIDRNKIVGDRYGLDTYD---TCARAV 135
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ LIVT +H+PR + V
Sbjct: 136 QTYGVTKALIVTQGFHVPRAVALCRGAGIDVA 167
>gi|67924001|ref|ZP_00517453.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854141|gb|EAM49448.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 237
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
+ LF+ LI FI ++F + ++ I + +V I+VL G IR E + + E
Sbjct: 30 FKLLFLALIGFIFSSLAF-NVLVRLPINTNHTVDGILVL-GGSIRREIYAAQIASDYQEV 87
Query: 65 IFISGVHHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
I V + ++ P+ E C A +T N +K+
Sbjct: 88 PII--VSQGSKPPCIKLIFQREQTPMDNVWVEQC------AYSTFDNFFFCVPLLQKHRV 139
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
H V ++T H+PR L L +I+ + I + +
Sbjct: 140 HKVKVITSQSHLPRAQL-LAQIHFGAKGIAVEVDTPK 175
>gi|296108273|ref|YP_003619974.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|295650175|gb|ADG26022.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 250
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 27/159 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHI---PDHPSVSAIVVLTGEPI-------- 48
+ + + + L+ G++ ++ + +P+V +VVL G
Sbjct: 39 KVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKQVNPNVKWVVVLGGGQNIGEGMPAN 98
Query: 49 ---------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIG 97
R+ L K+ +SG + + L + + + I
Sbjct: 99 DLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELTSWFAIDSEKVVIE 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++NT A+E +A F +VT HMPR+
Sbjct: 159 TASINTADQARELAAIVHDQPF---YLVTSAIHMPRSMA 194
>gi|227329837|ref|ZP_03833861.1| hypothetical protein PcarcW_21865 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 282
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 27/144 (18%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV- 70
P IVVL G R+ L G K+ +G
Sbjct: 74 RQTPQASKAEYIVVLGGGYTYNAEWAPSSNLISNSLPRVTEGVRLYHANPGAKLIFTGGA 133
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ VS + + + I I +TE A + + F L+VT
Sbjct: 134 AQGNP-VSSAKTAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGERPF---LLVTS 189
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 ANHLPRAMRFFQA--QGLAPIPAP 211
>gi|318040605|ref|ZP_07972561.1| hypothetical protein SCB01_02820 [Synechococcus sp. CB0101]
Length = 176
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
I+VL G+ R A EL + G + +SG S + R+ L + + + Y+
Sbjct: 18 ILVLGGDVERERVAAEL-AERDGLPVLVSGG----SNPEYAHWLFGRRGLDQGRVQLDYR 72
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDL 157
A +T N + HVL+VT HM R L L + + P + +
Sbjct: 73 ATDTLTNFTSIVEDLRRAKVRHVLLVTSSDHMQRAMLVGRLVAGSRGIGLTPVEVPCGER 132
Query: 158 EENSSIFK 165
K
Sbjct: 133 CTPEGWRK 140
>gi|17544865|ref|NP_518267.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
gi|17427154|emb|CAD13674.1| probable lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
Length = 251
Score = 54.5 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 31/181 (17%)
Query: 9 FVCLIFFIMGFI--SFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIERAF-------- 54
+I G + + ++ +AIV+L R+E
Sbjct: 33 LALVIAIGCGPVPAWLLDSLEGPFEARPAVTWGKRNAIVLLGAGTRRVEGGVEPGVFSYP 92
Query: 55 ELLEN----------QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
L+E KI +SG HH + + Q+ + + + + ++
Sbjct: 93 RLMEAAQQYQACRKTGADCKILVSGGDARHHGDPEATVYQRALLAIGIGADDVLLEPNSM 152
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NT NAQ + ++V+ H+ R+ L P P+ + DL+
Sbjct: 153 NTWQNAQFSRTALAAYAPERTVLVSSAIHLRRSLLYFAHFG----MTPTPVRADDLQATP 208
Query: 162 S 162
S
Sbjct: 209 S 209
>gi|300865454|ref|ZP_07110248.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336546|emb|CBN55398.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 267
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 20/158 (12%)
Query: 2 RYFWYGLFVCLIFFIMGF----ISFIRYVKQMHIPDHPSVS-AIV----VLTGE------ 46
R + L I +G F + + P + AIV V
Sbjct: 53 RSIFLLLIGLAILTPIGLNYYVKIFTNSYRYNDPANIPPENVAIVFGAGVWADGTPSPML 112
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK--IPIRQDLAECCIDIGYKALNTE 104
R++ A +L + KI ++G + S + + + + I + Y +T
Sbjct: 113 ADRVQAAVDLYKLGRIRKILMTGDNSSPYYNEVKAMMIYAEEKGVPNSDITLDYAGFSTY 172
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A +++T YH+PR + +
Sbjct: 173 ESCYRAKEIF---GVKQAVLITQSYHLPRAVYTCRALG 207
>gi|260223391|emb|CBA33910.1| hypothetical protein Csp_B21400 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 256
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 70/199 (35%), Gaps = 35/199 (17%)
Query: 23 IRYVKQMHIPDHPSVS-----AIVVLTGE--PIRIERA-FELLENQIGEKIFISGV---- 70
IR ++ + P+ +VVL G R++++ + L N GE++ +S
Sbjct: 60 IRNLESRYPEIAPAADLSVYAGVVVLGGGTAAGRLQQSHLQPLINDGGERLAVSAALALR 119
Query: 71 HHSV----------------SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
H ++ S+ ++ + + ++ NT NA +
Sbjct: 120 HPALPLVYTGGEGDPAGGGPSEAARARQFYESFRIPAVQVRYEAESRNTYENAVLTAKLP 179
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-----IKIL 169
N L++T +HMPR+ ++ V YP+ + +
Sbjct: 180 GVNPQDRWLLMTSAWHMPRSMATFEKAGWNVT--AYPVDYRAEDVTVWTRYSLLGGVSDW 237
Query: 170 RVLLIEYLKILLLSIQLSL 188
+++L E + + + L
Sbjct: 238 QLVLNELVGLAAYRLTGRL 256
>gi|254501304|ref|ZP_05113455.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437375|gb|EEE44054.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 176
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 13/128 (10%)
Query: 28 QMHIPDHPSVSAIV-----VLTGEP------IRIERAFELLENQIGEKIFISGV--HHSV 74
Q AIV V TG RIE A L I G +H
Sbjct: 2 QSRKYPQRPADAIVLLGAAVWTGGRPSPTLLRRIEHAAALYHAGAAPIIVGCGGLGNHPP 61
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ ++++ I + + I ++ NT NA ++ + + LIV+ YH+PR
Sbjct: 62 AEAEVMKRELIALGVPQSAIRTETRSRNTLENAVFSARILRREKLENTLIVSDRYHLPRA 121
Query: 135 FLELQRIN 142
L Q +
Sbjct: 122 VLCFQTLG 129
>gi|269837462|ref|YP_003319690.1| hypothetical protein Sthe_1433 [Sphaerobacter thermophilus DSM
20745]
gi|269786725|gb|ACZ38868.1| protein of unknown function DUF218 [Sphaerobacter thermophilus DSM
20745]
Length = 216
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 20/171 (11%)
Query: 28 QMHIPDHPSVSAIVVL-----TGEPI-----RIERAFELLENQIGEKIFISGVHHS---V 74
Q + AIVVL G P R++ A L E I ++G
Sbjct: 50 QARQDETAEADAIVVLGTAQFDGRPSPTFQARLDHARALFEAGYAPLIVLTGGAAEGDWT 109
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S+ + I Q + + + + +EA + +L+V+ +HM R
Sbjct: 110 SEAEAGRNYLIEQGVPSGVLLSVPAGRTSSESLREAEPELRERGISRILLVSDPFHMFR- 168
Query: 135 FLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
++RI + F P P S + E+SS+ + R + YL + +
Sbjct: 169 ---VKRIARDLGFSPLASPTRSSPIREDSSLEYRYMAREIGA-YLAYVFIK 215
>gi|262201027|ref|YP_003272235.1| hypothetical protein Gbro_1032 [Gordonia bronchialis DSM 43247]
gi|262084374|gb|ACY20342.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 228
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ A L + ++ +SG + VS+ + +R+ + + ++ +T
Sbjct: 118 RLNVAARLAKQHPFNRMVVSGGNTWWLPVSEAQFMNLGLLRRGIPMWQMVNEGRSTSTVQ 177
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
NA + + +IVT+ +HM R + +
Sbjct: 178 NATYTVGMLKAMGANGAVIVTNGFHMGRALNDFRAAAR 215
>gi|296135984|ref|YP_003643226.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
gi|295796106|gb|ADG30896.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
Length = 252
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 32/187 (17%)
Query: 2 RYFWYGL--FVCLIFFIMGFISFI--------RYVKQMHIPDHPSVSAI-VVLTGEPI-- 48
R+F L + ++F + F R Q I P A+ VVL G
Sbjct: 32 RFFTRFLTYAITVLFLLASMPLFANLALGALERKATQEKICSPPPPGALFVVLAGGIDSN 91
Query: 49 ----------------RIERAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAE 91
R+ A +L ++ + ISG ++ + L+ + ++
Sbjct: 92 PTHAQDFSALKTASLKRLLAAVQLAQHTPDSTLLISGGWGRTIREANLMGALAVQLGYPA 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T A + +VT HMPR + V +P
Sbjct: 152 SRMILDTTSRTTFQTAVNMRERILQFPVGRRYLVTSADHMPRAMMAFAH--ERVSICAWP 209
Query: 152 IISHDLE 158
+ +
Sbjct: 210 VDYEAIP 216
>gi|118443232|ref|YP_877657.1| hypothetical protein NT01CX_1576 [Clostridium novyi NT]
gi|118133688|gb|ABK60732.1| conserved protein [Clostridium novyi NT]
Length = 253
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 22/147 (14%)
Query: 9 FVCLIFFIMGFISFIRYVKQMH----IPDHPSVSAIVVLTGEP-----------IRIERA 53
F+ + I GF+SFI + + I+VL G R+++
Sbjct: 64 FLVKLVIIAGFVSFIILESCIIYFGISKKYVKSDYIIVL-GAAVHGDYMSLILKERVDKT 122
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+ L KI +SG S+++ +++ + + + I K+ T N + +
Sbjct: 123 LDYLREYPNTKIIVSGGKGPGESITEAEAMRRYLVSNGICDNQIIKEEKSRTTAENFKYS 182
Query: 111 SAWAE--KNNFH-HVLIVTHDYHMPRT 134
S +N V +VT ++HM R
Sbjct: 183 SKIIRSMENGRTPTVSVVTTNFHMLRA 209
>gi|89069286|ref|ZP_01156649.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
gi|89045162|gb|EAR51230.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
Length = 156
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R A L G + G H + +++ + + + + I ++ +T N
Sbjct: 23 RTLHAAGLYHAGRGRLLIPCGGQGRHGPPEAEVMRALLLGAGVPDAAILQERRSTSTWEN 82
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A VLIVT YH+PR L +R+ T P P+ +
Sbjct: 83 LLFARPLLAAQGETRVLIVTDRYHVPRARLAARRMGLTAAGAPPPLRGSHV--------P 134
Query: 167 KILRVLLIE 175
LR L E
Sbjct: 135 TQLRQALRE 143
>gi|312194498|ref|YP_004014559.1| hypothetical protein FraEuI1c_0611 [Frankia sp. EuI1c]
gi|311225834|gb|ADP78689.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 204
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 14 FFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
I+GF+ + D P V AIV+ G R++ A L N + +S
Sbjct: 44 LLIVGFLLTTAKLYVFPKRDAPVPVDAIVMFAGSAGRLDLAVTLARNGYAPVLAVS---- 99
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGY--KALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
P D + + K L T+G A+ A A + ++++T
Sbjct: 100 -----QPTPSDPCPPDTIPGVEVLCFHPKPLTTQGEARWTGATARARGWRSIIVITSTPQ 154
Query: 131 MPRTFLELQR 140
R L L R
Sbjct: 155 DTRARLRLSR 164
>gi|115359113|ref|YP_776251.1| hypothetical protein Bamb_4365 [Burkholderia ambifaria AMMD]
gi|115284401|gb|ABI89917.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 210
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 32/218 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEP 47
M L +I+ + + M +P P+ A++ VL
Sbjct: 1 MARIGRVLAAFACLWIVAAVVLVG--AGMRMPSEPADVAVIFGNALDDRGAPKPVL---A 55
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ +SG +++ ++ + + + I + + NT
Sbjct: 56 ARLDVGVRCYREGQCPAFLVSGAIDGPGLNEATAMRDYLVARGVPAERIAVDDQGDNTLA 115
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQF-IPYPIISHDLEENSSI 163
AQ A+ + + VLI++ YH+ R L +R+ + YP + SS
Sbjct: 116 TAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERVGIAGANISAAYPHHFQLRDIYSSW 175
Query: 164 FKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
++ + ++L L+ F ++
Sbjct: 176 REVPA----------YAIYVLRLWLNPDARPVSFRPML 203
>gi|84624480|ref|YP_451852.1| hypothetical protein XOO_2823 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368420|dbj|BAE69578.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 253
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 7/151 (4%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ +++ + + + + +
Sbjct: 93 YGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 153 SMNTLQNAQFSQPLLRAYGPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSI 212
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V L EYL + + + +
Sbjct: 213 LPQSYNFTLADVALHEYLGMARYRLYQWMGS 243
>gi|315107767|gb|EFT79743.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
Length = 206
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 7 AFVALLGPWTLAAALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 65
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG + + +++ + + + I + L T A
Sbjct: 66 YRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIF 125
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 126 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPDRTQPRDNVWWYGWGR 173
>gi|330685387|gb|EGG97045.1| putative membrane protein [Staphylococcus epidermidis VCU121]
Length = 320
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 25/170 (14%)
Query: 4 FWYGL--FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
W L F L F+ + + + SV I+VL R++
Sbjct: 115 LWLSLIGFTTLFAFLCYLTWSSTFGSRHF---NQSVDLIIVLGAGIFTEEVTPMLKERLD 171
Query: 52 RAFELLE-NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
RA E+ ++ K+ +SG + + I +Q+ I+Q + I + ++ NT N
Sbjct: 172 RALEIYHYSEHKPKLLVSGGQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNF 231
Query: 108 QEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ N ++ VT +H+ R ++ + Y + SH
Sbjct: 232 VYSKDIIHDYFVNMPKIVCVTSQFHILRAL----KLAKNLDIPTYGVGSH 277
>gi|124268119|ref|YP_001022123.1| hypothetical protein Mpe_A2935 [Methylibium petroleiphilum PM1]
gi|124260894|gb|ABM95888.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 266
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 37/181 (20%)
Query: 28 QMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV 70
+ + +AI+V+ G R+ A L Q G + SG
Sbjct: 82 KPPKAEPAPTTAILVIGGGRIPRAPESGTADLQPASLERLRYAVRL-SRQTGLPLAFSGG 140
Query: 71 -------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+S+ + Q+I +D + + +T NA+ + H++
Sbjct: 141 LGWGQHDDGGLSEAEIAQRI-AERDFLRPIKWVETASRDTRENARLSVKQLHTAGVRHIV 199
Query: 124 IVTHDYHMPRTFLELQR---------INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+VTH +HMPR ++ F+ P LE S +RV+L
Sbjct: 200 LVTHAWHMPRALRAFRQEAGESMQITAAPMGYFV--PADRGVLEWLPSSAGFGEVRVVLR 257
Query: 175 E 175
E
Sbjct: 258 E 258
>gi|153941422|ref|YP_001392099.1| hypothetical protein CLI_2871 [Clostridium botulinum F str.
Langeland]
gi|152937318|gb|ABS42816.1| putative membrane protein [Clostridium botulinum F str. Langeland]
gi|295320103|gb|ADG00481.1| putative membrane protein [Clostridium botulinum F str. 230613]
Length = 351
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K + + + I +A+NT N +
Sbjct: 196 RQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSK 255
Query: 112 AW------AEKNNFHHVLIVTHDYHMPRTFL 136
A + + ++VT+++H+ R+ +
Sbjct: 256 KLLEEDHKAREKEYR-CIVVTNNFHLFRSLI 285
>gi|170756849|ref|YP_001782427.1| hypothetical protein CLD_1753 [Clostridium botulinum B1 str. Okra]
gi|169122061|gb|ACA45897.1| putative membrane protein [Clostridium botulinum B1 str. Okra]
Length = 351
Score = 54.5 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K + + + I +A+NT N +
Sbjct: 196 RQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSK 255
Query: 112 AW------AEKNNFHHVLIVTHDYHMPRTFL 136
A + + ++VT+++H+ R+ +
Sbjct: 256 KLLEEDYKAREKEYR-CIVVTNNFHLFRSLI 285
>gi|168184465|ref|ZP_02619129.1| putative membrane protein [Clostridium botulinum Bf]
gi|237796257|ref|YP_002863809.1| hypothetical protein CLJ_B3049 [Clostridium botulinum Ba4 str. 657]
gi|182672403|gb|EDT84364.1| putative membrane protein [Clostridium botulinum Bf]
gi|229263461|gb|ACQ54494.1| putative membrane protein [Clostridium botulinum Ba4 str. 657]
Length = 351
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K +D+ + I KA+NT N +
Sbjct: 196 RQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSK 255
Query: 112 AWAEK------NNFHHVLIVTHDYHMPRTFL 136
E+ + ++ VT+++H+ R+ +
Sbjct: 256 KLLEEDYKARGKEYRCII-VTNNFHLFRSLI 285
>gi|168179230|ref|ZP_02613894.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226950231|ref|YP_002805322.1| hypothetical protein CLM_3185 [Clostridium botulinum A2 str. Kyoto]
gi|182669494|gb|EDT81470.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226844033|gb|ACO86699.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto]
Length = 351
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K +D+ + I KA+NT N +
Sbjct: 196 RQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSK 255
Query: 112 AWAEK------NNFHHVLIVTHDYHMPRTFL 136
E+ + ++ VT+++H+ R+ +
Sbjct: 256 KLLEEDYKARGKEYRCII-VTNNFHLFRSLI 285
>gi|157149755|ref|YP_001450471.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
gi|157074549|gb|ABV09232.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
Length = 340
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 22/153 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+Y F+ L + + G F Y P AI+VL R+ +
Sbjct: 134 LFYSTFLYLSYVLYGT--FCNYF-----PVRIEPDAIIVLGSGLIGDKVPPLLAQRLTKG 186
Query: 54 FELLENQIGE-KIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+ E G K+ +SG S+ + + Q + + I I ++ T N
Sbjct: 187 KTIYEQFEGRPKLIVSGGQGADELTSEAAAMANYLMEQGVQKDAILIENRSRTTFENLTF 246
Query: 110 ASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRI 141
+ A E+ VL+VT+ +H R + ++R+
Sbjct: 247 SKAILEEQGLGKSVLVVTNSFHALRAGVFMRRL 279
>gi|254245595|ref|ZP_04938916.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
gi|124870371|gb|EAY62087.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
Length = 179
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 18/143 (12%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLE--NQIGEK--IFISGVHHSVSKDILLQKI 83
+ P + RI + L Q E+ + +SG D
Sbjct: 16 RTDTGAQPPPDGV-------ARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVY 68
Query: 84 P---IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ Q +A + + + T NA+ ++ ++VT Y M R L+ +R
Sbjct: 69 GRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRR 128
Query: 141 INSTVQFIPYPIISHDLEENSSI 163
P P+ ++ +
Sbjct: 129 FGID----PQPVYANLRRAQTGW 147
>gi|315104704|gb|EFT76680.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
Length = 206
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGE------PIRIERAFEL 56
L + + V + P AIV VL R++ A +L
Sbjct: 7 AFVALLGPWTLAAALSYGKVHDV-ADTEPRDVAIVLGAQVLPSGTPSAYLRGRLDVAADL 65
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I +SG + + +++ + + + I + L T A
Sbjct: 66 YRSGKAKVILVSGDNRETHYNEPKVMKTYLVSKGVPAARIVEDFAGLGTYDTCVRARRIF 125
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++VT DYH RT + + + + P + + +
Sbjct: 126 ---GVDRAIMVTQDYHEIRTVATCR--MTGLDAVGVPGRTQPRDNVWWYGWGR 173
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K N +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|309780144|ref|ZP_07674895.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308920847|gb|EFP66493.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 262
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 25/146 (17%)
Query: 38 SAIVVLTGEPIRIERAFE--------------LLENQIGE----KIFISGV---HHSVSK 76
+AIV+L R+ + E L + KI +SG HH +
Sbjct: 79 NAIVLLGAGTFRVGDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPE 138
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Q+ +R +A+ + I +++NT NAQ + + ++V+ H+ R+ L
Sbjct: 139 ATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLL 198
Query: 137 ELQRINSTVQFIPYPIISHDLEENSS 162
P P+ + DL+ +S
Sbjct: 199 YFTHFG----MAPVPVRADDLQAAAS 220
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K N +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|295134706|ref|YP_003585382.1| hypothetical protein ZPR_2866 [Zunongwangia profunda SM-A87]
gi|294982721|gb|ADF53186.1| secreted protein containing DUF218 [Zunongwangia profunda SM-A87]
Length = 209
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 22/155 (14%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMH----IPDHPSVSAIVVLTGEP------------IRIE 51
L V IF +G +FI+ I + PS +VL G R++
Sbjct: 14 LIVLGIFITLGLEAFIKQDIASRMYAEINEVPSAKTAIVL-GASVHSDGKLSPILQDRVD 72
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A +LL++ E+I ISG H S + + + + + + + +T +
Sbjct: 73 TAIDLLKHHKVEEILISGDHGSDDYNEVDAIANYLTENGIPSDILILDHAGFDTYDSMYR 132
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
AS + N +++T +H+PR + +
Sbjct: 133 AS---KVFNIKDAIVITQQFHLPRALFIAKHLGLD 164
>gi|89900349|ref|YP_522820.1| hypothetical protein Rfer_1557 [Rhodoferax ferrireducens T118]
gi|89345086|gb|ABD69289.1| protein of unknown function DUF218 [Rhodoferax ferrireducens T118]
Length = 249
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Query: 53 AFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
EL ++ +G + +L+++ +R + + + A NTE +
Sbjct: 105 GMELYAAGKAPRLVFTGGLLPWQGEQEPEGQVLRRMALRFGVPANAVVVSGPAQNTEQES 164
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+++VT +HMPR ++ PYP+
Sbjct: 165 AAVRQLLGP-GVRRIVLVTSAFHMPRAQRLFEQA--GFVVTPYPVD 207
>gi|116074507|ref|ZP_01471769.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
gi|116069812|gb|EAU75564.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
Length = 261
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 48/211 (22%)
Query: 2 RYFWYGLFVCLIFFIMG--------FISFIRYVKQMHIPDHPSVSAIVVLTG-------- 45
R W + ++ ++ + ++ + AIVVL+G
Sbjct: 30 RRRWPVIVAVVLLWVSSLGIVSQLLWRWLESPWQRQLVSAASKADAIVVLSGARHPAPGA 89
Query: 46 -------EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA---ECCID 95
+P R +L ++ +G L P L +
Sbjct: 90 SQVSEWHDPDRFLTGVDLFRAGKAPRLLFTG-----GASPFLPGQPPEGSLYLKEAAALG 144
Query: 96 IGYKAL-------NTEGNAQEASAWA----------EKNNFHHVLIVTHDYHMPRTFLEL 138
+ A+ NT A + + +++VT +HM R
Sbjct: 145 VPTAAMASTPPVVNTAEEAVAIRRLLMAGSGSQLSDQDASSGRIILVTSAFHMRRAQRLF 204
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+R VQ P + +
Sbjct: 205 ERQGLVVQPFPVDFQARGRWAGAVWTDPTQW 235
>gi|187927155|ref|YP_001897642.1| hypothetical protein Rpic_0045 [Ralstonia pickettii 12J]
gi|187724045|gb|ACD25210.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 266
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 25/146 (17%)
Query: 38 SAIVVLTGEPIRIERAFE--------------LLENQIGE----KIFISGV---HHSVSK 76
+AIV+L R+ + E L + KI +SG HH +
Sbjct: 83 NAIVLLGAGTFRVGDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPE 142
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Q+ +R +A+ + I +++NT NAQ + + ++V+ H+ R+ L
Sbjct: 143 ATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLL 202
Query: 137 ELQRINSTVQFIPYPIISHDLEENSS 162
P P+ + DL+ +S
Sbjct: 203 YFTHFG----MAPVPVRADDLQAAAS 224
>gi|269120749|ref|YP_003308926.1| hypothetical protein Sterm_2141 [Sebaldella termitidis ATCC 33386]
gi|268614627|gb|ACZ08995.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 346
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 47/123 (38%), Gaps = 22/123 (17%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP 84
++Q + + +A +++TG ++ +++ L++
Sbjct: 199 RLEQTYEAARLNPNANIIVTGG----------VQKG------------GLTESYLMKNWL 236
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
+ + +A + I KA +T NA ++ +K N V+++T H+ R LQ
Sbjct: 237 VEKGIAADRVIIEDKARDTVENAIYSTEILKKYNPKRVILITSASHIRRGTALLQEAADN 296
Query: 145 VQF 147
Sbjct: 297 AGL 299
>gi|94499865|ref|ZP_01306401.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
gi|94428066|gb|EAT13040.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
Length = 256
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 5/134 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L K+ ++G SK + +++ I + E I + +T
Sbjct: 114 RLMEGLRILNANPNGKLIVTGYASGNSKSSAQVYKEVAIAMGIDESRIIALEEPKDTVEE 173
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + + ++++VT HMPR + Q +Q P I+ E F
Sbjct: 174 ANAVANALNNHKDLNIVLVTSASHMPRAIIFFQSYFPDIQPAPTFFIAKHTESTDWRFDS 233
Query: 167 KIL---RVLLIEYL 177
L + EYL
Sbjct: 234 AGLLKAERAIYEYL 247
>gi|107022563|ref|YP_620890.1| hypothetical protein Bcen_1009 [Burkholderia cenocepacia AU 1054]
gi|116689512|ref|YP_835135.1| hypothetical protein Bcen2424_1490 [Burkholderia cenocepacia
HI2424]
gi|105892752|gb|ABF75917.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116647601|gb|ABK08242.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 224
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 58/187 (31%), Gaps = 33/187 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVLTGEPIRIERAFE-- 55
+ +F+++ + + +HP + ++++ R + +
Sbjct: 10 ISIVAAALFWLLATGWLAAPLIAWSEAGVTPVEHPDMHGRTTLILIGAGTHRTDTGVQPP 69
Query: 56 ------------LLE--NQIGEK--IFISGVHHSVSKDILLQKIP---IRQDLAECCIDI 96
L Q E+ + +SG D + + +A + +
Sbjct: 70 PDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAEGVAPADLVL 129
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ T NA+ ++ ++VT Y M R L+ +R P P+ ++
Sbjct: 130 EPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGID----PQPVYANL 185
Query: 157 LEENSSI 163
+
Sbjct: 186 RRAQTGW 192
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K N +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|146318649|ref|YP_001198361.1| hypothetical protein SSU05_0995 [Streptococcus suis 05ZYH33]
gi|146320855|ref|YP_001200566.1| hypothetical protein SSU98_1008 [Streptococcus suis 98HAH33]
gi|253751768|ref|YP_003024909.1| hypothetical protein SSUSC84_0901 [Streptococcus suis SC84]
gi|253753592|ref|YP_003026733.1| membrane protein [Streptococcus suis P1/7]
gi|253755527|ref|YP_003028667.1| membrane protein [Streptococcus suis BM407]
gi|145689455|gb|ABP89961.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
gi|145691661|gb|ABP92166.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
gi|251816057|emb|CAZ51677.1| putative membrane protein [Streptococcus suis SC84]
gi|251817991|emb|CAZ55773.1| putative membrane protein [Streptococcus suis BM407]
gi|251819838|emb|CAR45817.1| putative membrane protein [Streptococcus suis P1/7]
gi|319758117|gb|ADV70059.1| hypothetical protein SSUJS14_0982 [Streptococcus suis JS14]
Length = 336
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 24/161 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---------HPSVSAIVVLTGE------- 46
F + ++ F+S+ + ++ + +VVL
Sbjct: 122 LSAISFFNMVFVYVGFFVSYAIIISMLYTMSSFVNLVNFFPGKLDYVVVLGAGLIGDKVT 181
Query: 47 ---PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RIE+ + + Q G K+ +SG +++ + + + + I I ++
Sbjct: 182 PLLASRIEKGIAIYQKQPGSKLIMSGGQGPDELIAEGQAMANYALEKGVPAEDILIENQS 241
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
NTE N + + A + +VT+ YH+ R L +++
Sbjct: 242 TNTEENLKFSYALMKPG--SRFALVTNYYHVFRALLLARQL 280
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
E N + ++ K N +IVT DYHM R +
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRALM 149
>gi|307324821|ref|ZP_07604027.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306889703|gb|EFN20683.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 231
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 59/176 (33%), Gaps = 20/176 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R G+ VC++ + ++ + + D PS VV R+
Sbjct: 18 RLVQGGVLVCVLALLPATWLRLSTDDRIRTVADVPSAPVGVVFGAGLWNGEPSPYLAHRL 77
Query: 51 ERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L ++ + ++G + H + ++ +++ + + I + +T +
Sbjct: 78 DAAVRLYKDGRVHALLVTGDNSRHDYDEPDAMRAYLVKRGVPDRRIVSDFAGFDTWDSCS 137
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
A H ++V+ +H+ R Y + + + + F
Sbjct: 138 RAR---RVFGVHKAVLVSQGFHVRRALALCGAAGID----AYGVAVAEPHDVTWYF 186
>gi|58582596|ref|YP_201612.1| hypothetical protein XOO2973 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427190|gb|AAW76227.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 210
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 7/151 (4%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ +++ + + + + +
Sbjct: 50 YGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPS 109
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 110 SMNTLQNAQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSI 169
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V L EYL + + + +
Sbjct: 170 LPQSYNFTLADVALHEYLGMARYRLYQWMGS 200
>gi|289207946|ref|YP_003460012.1| hypothetical protein TK90_0761 [Thioalkalivibrio sp. K90mix]
gi|288943577|gb|ADC71276.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 262
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 58/194 (29%), Gaps = 31/194 (15%)
Query: 28 QMHIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISG 69
+ + AIV+L G R+ L I +SG
Sbjct: 69 RDSVLATGRADAIVILGGGRWVGRAEDAGHDALNPRTHERVRAGARLHRATDLP-IVVSG 127
Query: 70 VHHSV-----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
S+ L+ ++QDL + + NT NA + VL+
Sbjct: 128 GTPRALPGRRSEAELMAAT-LQQDLGVSARWLENTSRNTCENATHTRQRLQGQGVEAVLV 186
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN------SSIFKIKILRVLLIEYLK 178
VT H+PR +R P E + I+ R L E+L
Sbjct: 187 VTQAMHLPRALECFERAGFDAYPAPAGFRGTTGEPRGLQDFLPTAEAIETSRFALREWLA 246
Query: 179 ILLLSIQLSLSTQT 192
+ L ++ L T
Sbjct: 247 RVALPLRERLRGST 260
>gi|257063415|ref|YP_003143087.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
gi|256791068|gb|ACV21738.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 212
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 25/155 (16%)
Query: 4 FWYGLFVCLIFFIMGFISFI-------RYVKQMHIPDHPSVSAIVVLTGEP--------- 47
F L + + + G +++ Y + IVVL G
Sbjct: 8 FLLALLIAAVVVVGGLNAWVVMSATTDDYTLEQAQELDVQAECIVVL-GASVLPDGTPSD 66
Query: 48 ---IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALN 102
R++ A L E+ I +SG + D +++ I Q + I + +
Sbjct: 67 ILKGRLDAAIALYESGAAPVIVMSGNGTESNYDEPFHMKQYAIEQGVPADAIVLDRAGYH 126
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
T + +++T +YH+ R+ +
Sbjct: 127 TYDTMWRLANI---YGADSCIVITQEYHLYRSVFD 158
>gi|170732816|ref|YP_001764763.1| hypothetical protein Bcenmc03_1466 [Burkholderia cenocepacia MC0-3]
gi|169816058|gb|ACA90641.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 260
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 33/187 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSA---IVVLTGEPIRIERAFE-- 55
+ +F+++ + + +HP + ++++ R + +
Sbjct: 46 ISIVAAALFWLLATGWLAAPLIAWTEAGVTPVEHPDMHGRTTLILIGAGTHRTDSGLQPP 105
Query: 56 ------------LLE--NQIGEK--IFISGVHHSVSKDILLQKIP---IRQDLAECCIDI 96
L Q E+ + +SG D + Q +A + +
Sbjct: 106 PDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAVYGRQLVAQGVAPADLVL 165
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ T NA+ ++ ++VT Y M R L+ +R P P+ ++
Sbjct: 166 EPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFRRFGID----PQPVYANL 221
Query: 157 LEENSSI 163
+
Sbjct: 222 RRAQTGW 228
>gi|269925497|ref|YP_003322120.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789157|gb|ACZ41298.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
Length = 188
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 67/190 (35%), Gaps = 23/190 (12%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAFELL 57
+ +I + + I V + AI+VL G R++ A L
Sbjct: 5 LLLVIVWFGNVLIEIHKVGNTD--NAVKSDAILVL-GAAQYNGRPSPVFRARLDHALALY 61
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ ++ K+ + G + ++ + +R+ + + +T + + A
Sbjct: 62 KKRLAPKVVVVGGKARGDTYTEADSGVRYLLRRGIPSSSLVAVPHGRSTYSSLRAAKNML 121
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+ + ++IV+ +HM R+ E+ + + P ++++ R ++
Sbjct: 122 QPKHVRSLIIVSDRFHMYRSL-EMAKSL-GFRVTGSPTPDSPIDKDP----AAETRYVIR 175
Query: 175 EYLKILLLSI 184
E L I
Sbjct: 176 EALAYTAYRI 185
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K N +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|73539728|ref|YP_294248.1| hypothetical protein Reut_A0022 [Ralstonia eutropha JMP134]
gi|72117141|gb|AAZ59404.1| Protein of unknown function DUF218 [Ralstonia eutropha JMP134]
Length = 337
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 21/196 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGEP----------I 48
+ W L+ +++ F ++ + +P + AI+VL
Sbjct: 142 QLLWRALWTAFAVWLVTVGVFFHGIRSGLSVSVPTGVPIQAIIVLGSGTPDCHASPALTA 201
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ K+ +SG ++ ++ + + +A + ++ +TE
Sbjct: 202 RLEQGLIQARRLPAAKVVVSGGPDFGRHCTEADIMADYLVARGVAADRLIREGRSTSTEE 261
Query: 106 NAQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
N + E N +++VT D+H+ R ++ + F L N+
Sbjct: 262 NLVFSRQLLEAQNVDADGPIVVVTSDFHVRRAVGIARKAGFSQIFGVGAATPLYLRFNAW 321
Query: 163 IFKI--KILRVLLIEY 176
+ + I +L EY
Sbjct: 322 LREYFASISSWILREY 337
>gi|67923734|ref|ZP_00517200.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854442|gb|EAM49735.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 197
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 10/151 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LF L +G + ++ + AI VL G R A +L I++
Sbjct: 24 LFPILCLATVGLWLGYKQLQSHFVQPE----AIFVLGGHKDRESFAAQLALKHPDLPIWV 79
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + + D + Y+A +T N ++ V ++T
Sbjct: 80 SSGSPQHYVTQIFSNAGVSGDRLH----LDYRAKDTVTNFTSLVKELKEQGIDSVYLITS 135
Query: 128 DYHMPRTFL--ELQRINSTVQFIPYPIISHD 156
D HM R + E+ + P + S D
Sbjct: 136 DNHMNRARIIGEIVFGAQGIILKPLSVPSKD 166
>gi|299068290|emb|CBJ39511.1| putative lipoprotein transmembrane [Ralstonia solanacearum CMR15]
Length = 251
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 35/192 (18%)
Query: 2 RYFWYGLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIE 51
R GL + ++ + ++ +AIV+L R+E
Sbjct: 22 RRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFEARPVVTWGKRNAIVLLGAGTRRVE 81
Query: 52 RAF--------ELLEN----------QIGEKIFISGV---HHSVSKDILLQKIPIRQDLA 90
L+E KI +SG HH + + Q+ +
Sbjct: 82 GGVEPGVFSYPRLMEAAQQYQACRKTGADCKILVSGGDARHHGDPEAAVYQRALQAIGIG 141
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + ++NT NAQ + ++V+ H+ R+ L P
Sbjct: 142 ADDVLLEPNSMNTWQNAQFSRTALAAYAPERTVLVSSAIHLRRSLLYFAHFG----MTPT 197
Query: 151 PIISHDLEENSS 162
P+ + DL+ S
Sbjct: 198 PVRADDLQATPS 209
>gi|255036862|ref|YP_003087483.1| hypothetical protein Dfer_3103 [Dyadobacter fermentans DSM 18053]
gi|254949618|gb|ACT94318.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 256
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 25/172 (14%)
Query: 32 PDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGV----------HHSVSKDILL 80
+ A L G+ R+ + F L + KI I+G + + LL
Sbjct: 87 ANTDMPDADHALMGDRGDRVLQTFLLYKAGKIRKILITGASADDAMAGKRGETKTAAALL 146
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHMPRTFLELQ 139
+ + I KA NT NA ++ K +++T +HM R+ +
Sbjct: 147 VQWGVPAG----DIVFEEKAKNTRQNALNSAQILRKMFPSGKYILITSAFHMRRSVGCFE 202
Query: 140 RINSTVQFIPYPIISH----DLEENSSIFKIKIL---RVLLIEYLKILLLSI 184
+ ++ P+P + +L I + L VL E + ++ I
Sbjct: 203 KA--GIKTKPFPADFYGGYGELTVRKMIPEPSALDSFNVLWHEMVGFVIYKI 252
>gi|256375178|ref|YP_003098838.1| hypothetical protein Amir_1036 [Actinosynnema mirum DSM 43827]
gi|255919481|gb|ACU34992.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 248
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 9/126 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A +L + + +SG + D ++ +RQ + + I Y L+T
Sbjct: 95 AGRLDVAADLYHRGKVKVLLVSGDNSRPDYDEPTAMRNYLLRQGVPDSAIVSDYAGLDTW 154
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A+ +VT +H+PR + Y + +S
Sbjct: 155 DSCARANRIF---GVTSATVVTQRFHLPRAVALCRAAG----IEAYGVGHDTWGARTSTT 207
Query: 165 KIKILR 170
R
Sbjct: 208 LYGYFR 213
>gi|299531045|ref|ZP_07044458.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
gi|298721002|gb|EFI61946.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
Length = 268
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 21/188 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGE----------PIR 49
+ W +V L +++ F + + P V +IVVL R
Sbjct: 73 QRLWSLGWVVLALWLISLFWFWSRLSGLGLAPQQVPPVQSIVVLGSGTLDGHPRPVLAAR 132
Query: 50 IERAFELLE-NQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEG 105
+E+A +L + GV + + + + +A + + + +TE
Sbjct: 133 LEQAAQLAKLQPQAFVAVCGGVDWGEKESEAEVMARYLQQHHGIAAQRLVLEKLSTSTEL 192
Query: 106 NAQEASAWAEKNNFHH---VLIVTHDYHMPRTF-LELQRINSTVQFIPYPIISHDLEENS 161
N + + + + +V+ D+H+ R + ++ V + P N+
Sbjct: 193 NLKLSRPLLAERGVAADAPMAMVSSDFHLMRAMDIAKRQDLPQVYPVAAP-TPLATRFNA 251
Query: 162 SIFKIKIL 169
+ + +
Sbjct: 252 WLREYFAM 259
>gi|209522662|ref|ZP_03271220.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
gi|209496711|gb|EDZ97008.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
Length = 229
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVH- 71
RY + +PD P +V RI+ A +L + EKI ++G +
Sbjct: 50 RYTEIADVPDKPVA---IVFGAGLWADGTPTPMLADRIQGAIDLYKLGRVEKILMTGDNG 106
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
++ + +Q I Q + I + Y +T + A +++T YH
Sbjct: 107 TPEYNEVVAMQLYAIDQGVPANDIRLDYAGFSTYESCYRAREIF---GIETAVLITQQYH 163
Query: 131 MPRTFL 136
+PR
Sbjct: 164 LPRAVY 169
>gi|329930883|ref|ZP_08284276.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
gi|328934500|gb|EGG31008.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
Length = 210
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV----VLTGEP-----IRIERAFEL 56
GL ++ + + + + + + PS +AIV V G+P RI++A L
Sbjct: 23 LGLIAIMLVYSVN-VGYTIWKYAGRTVNIPSDAAIVLGAAVWEGKPSPVFQGRIDQALWL 81
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ Q +K+ +G V++ ++ I+ + E I + + TE N A
Sbjct: 82 YDQQYVDKLIFTGGRGSEDEVAESEAAKQYAIKHGVPERDILVETTSAITEQNLYYADKL 141
Query: 114 AEKNNFHHVLIVTHDYHMPRTFL 136
+ LIV+ HM R +
Sbjct: 142 GDAAGLSSYLIVSDPLHMKRAMV 164
>gi|170078127|ref|YP_001734765.1| hypothetical protein SYNPCC7002_A1518 [Synechococcus sp. PCC 7002]
gi|169885796|gb|ACA99509.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 139
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRINS 143
+ + E + I ++A++T N + HV ++T D+HM R +
Sbjct: 16 QAAIPENRLHIDHRAIDTVTNFTTLVKDFSDRHIQHVYLITSDFHMRRAQAIAFFVFGSR 75
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+ P PI S+ E I R +L
Sbjct: 76 GIITTPIPIPSNQPNETLWHVSRDIGRAIL 105
>gi|226361567|ref|YP_002779345.1| hypothetical protein ROP_21530 [Rhodococcus opacus B4]
gi|226240052|dbj|BAH50400.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 222
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 17/152 (11%)
Query: 9 FVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGE----------PIRIERAFEL 56
+ ++ + R + D P ++VL + R++ A L
Sbjct: 19 ALAVLVVAASTVWISREASGHVYDVEDAPEAPVVIVLGAQVRDGKPQEYLAGRLDVAVRL 78
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + + +SG + S D + + + I L+T +
Sbjct: 79 VRDGRARAVLVSGDGNGRSGDEIAAMTDYLVENGIDRSKIVGDRYGLDTYD---TCARAV 135
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ LIVT +H+PR + V
Sbjct: 136 QTYGVTKALIVTQGFHVPRAVALCRGAGIDVA 167
>gi|229085827|ref|ZP_04218054.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
gi|228697494|gb|EEL50252.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
Length = 209
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 17/160 (10%)
Query: 8 LFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+F+ +I I+ F+S+ Y D A +VL G RI A
Sbjct: 15 VFLLMISSIILFVSYAAYDIWSYRFKTDEVDTDAAIVL-GAASWNGKPSPVFRERINHAI 73
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + ++ D+ + I I ++ TE N + A
Sbjct: 74 SLYKNGSIKKIIFTGGTKFEAEQEEARTAKAYALKHDVKDEDILIETQSRFTEDNLKNAK 133
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
N IV+ HM R + I P P
Sbjct: 134 QVGMDNGLQTYTIVSDPLHMKRAMKIAKHIGMEAYSSPTP 173
>gi|284052580|ref|ZP_06382790.1| hypothetical protein AplaP_14023 [Arthrospira platensis str.
Paraca]
gi|291568842|dbj|BAI91114.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 328
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 19/166 (11%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCIDI 96
LT RI EL ++ + I+ +H + + Q + I + I +
Sbjct: 162 LTATGDRIPYTAELYRERLARLVIIAAGDRHELIHPTNEAKDIQQLL-IYMGVLPRDILL 220
Query: 97 GYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTV--------QF 147
++ A E EK +++VT M R L ++ V F
Sbjct: 221 ATESHTIREEALEVKDIMEKRRLGRTIILVTSALEMRRAALAFTQVGLKVIPAPTNFSTF 280
Query: 148 IPYPIISHDLEENSSIFKIKILRV---LLIEYLKILLLSIQLSLST 190
IPY + L + ++ EYL ++ ++
Sbjct: 281 IPYGKRKDRVSFQDFAPNADALVLSTRVVDEYLATFYYFLRGWMAP 326
>gi|114776481|ref|ZP_01451526.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553311|gb|EAU55709.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
Length = 257
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP------- 149
+A T N +K H +++VT +HMPR+ + + V P
Sbjct: 162 ENRARTTWENGLYIRDMMKKAGIHRIILVTTAWHMPRSVRVFESLGMHVIAAPCSYRAGR 221
Query: 150 --YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
Y + S+ N L EYL +L +
Sbjct: 222 QAYDLRSYLPRWNVLSDSGDGL----HEYLGLLWYRL 254
>gi|237798424|ref|ZP_04586885.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021276|gb|EGI01333.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 256
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF----------IRYVKQMHIPD-------HPSVSAIVVL 43
+R L +G + R +++ AIVVL
Sbjct: 27 LRRSRPRLAAACFIVGLGGLWLMSLPVVVEFSARQLERTTPLPRQQWPILAQQADAIVVL 86
Query: 44 ----------------TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
TG R+ A L + + G+H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPIMTAGGLHFDQPPSEASIMAQSL 146
Query: 87 QDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
Q+ + ++ T NA A+ + V++VT +HMPR ++ TV
Sbjct: 147 QEDFGVTVRWQEGQSRTTWENATMAARVLQPLGIRRVVLVTQAWHMPRARWSFEQAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|331011324|gb|EGH91380.1| hypothetical protein PSYTB_16950 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 256
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIMAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D G A T NA +A + V++VT +HM R ++ TV
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEKAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|222084312|ref|YP_002542841.1| hypothetical protein Arad_0152 [Agrobacterium radiobacter K84]
gi|221721760|gb|ACM24916.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 263
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 17/121 (14%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISG----------VHHSVSKDILLQKIPIRQDLAEC 92
L R+ A L + +I +SG +S+ + L E
Sbjct: 101 LDSGGDRLIEALRLAQKYPQARIVVSGGDGSIGGDYEGDAVISERFFTALGIGKDRLVE- 159
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ T NA +N L++T +HMPR+ ++ + +P+P+
Sbjct: 160 ----DKTSRTTFENAVNTKELLAQNGLSGCLLITSGFHMPRSMGIFRK--QGIDVVPWPV 213
Query: 153 I 153
Sbjct: 214 D 214
>gi|262281176|ref|ZP_06058958.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257407|gb|EEY76143.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 261
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVLTGE----------PI 48
+ W ++CL +++ F ++K + + P V+AI+VL
Sbjct: 65 LHTLWRFGWLCLWIWLISLGYFFDFIKENKETSQNLPPVNAIIVLGSGVENGQPSKTLAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L+ + + G+ S + + + + LA+ + + K+ +TE
Sbjct: 125 RLDTAAPIALKQLQAKVVVTGGLDFSEKESEALVMSRYLEQHYHLAKERMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFL 136
N + + +++ + IVT D+H PR
Sbjct: 185 LNLKNSKPLLAQHHITLDQPIAIVTSDFHTPRAAA 219
>gi|325923915|ref|ZP_08185510.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
gi|325545597|gb|EGD16856.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
Length = 253
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 15/154 (9%)
Query: 47 PIRIERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L KI ISG +S+ ++ +K+ I + + + +
Sbjct: 93 YGRIVESARLYRQCRAHGGDCKIEISGGDARGLGLSEAVVYRKVLIGIGIDQADLIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + K V++V+ H+ R L + P+ S L
Sbjct: 153 SMNTWQNAQFSQPLLRKYRADRVVLVSSATHLRRAELYFRHFG----IEATPVRSDWLTA 208
Query: 160 NSSIF----KIKILRVLLIEYLKILLLSIQLSLS 189
+ + + V L EYL I + L
Sbjct: 209 SWAWLPQSYNFTVADVALHEYLGIARYRVYEWLG 242
>gi|312135433|ref|YP_004002771.1| hypothetical protein Calow_1424 [Caldicellulosiruptor owensensis
OL]
gi|311775484|gb|ADQ04971.1| protein of unknown function DUF218 [Caldicellulosiruptor owensensis
OL]
Length = 210
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%)
Query: 32 PDHPSVSAIVVLTGE------------PIRIERAFELLENQIGEKIFISGV---HHSVSK 76
I+VL R+ +AFEL + I + G ++ +
Sbjct: 48 AKPKKSDCIIVL--GCAVYGNFPSPFFRERLNKAFELYKKGYARYIIVCGAKGPGENIFE 105
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ I + + + K+ +T N A + F +IV++ +H+ R L
Sbjct: 106 AEAGKRYLIGKGVLPEFVLKEDKSFSTYENLLHAKRIMNEKGFKSAIIVSNIFHLERACL 165
Query: 137 ELQRINSTVQF 147
+++ F
Sbjct: 166 IARKLKINASF 176
>gi|159901379|ref|YP_001547626.1| hypothetical protein Haur_4868 [Herpetosiphon aurantiacus ATCC
23779]
gi|159894418|gb|ABX07498.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 202
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 18/195 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVL-----TGEPI-----R 49
+R GL L + FIS V +Q + V A++VL GEP R
Sbjct: 9 LRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPVDALLVLGAAQWDGEPSPVLEAR 68
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L +I +SG + + S+ + I + I + +T
Sbjct: 69 LTEAIRLYRLGYARRIIVSGGTGLNDTRSEASVAYDYLIEHSIDPTLIISVAQGSDTRST 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
++ +LIVT H+ R ++ + ++ I
Sbjct: 129 LLAVHDEMQRQQIDSLLIVTDPPHLLRAL----KMAHDYGITSFGAPVKANSPTTNWASI 184
Query: 167 KILRVLLIEYLKILL 181
K + YL +L
Sbjct: 185 KATSREALAYLAYVL 199
>gi|227111948|ref|ZP_03825604.1| hypothetical protein PcarbP_03233 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 282
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 27/144 (18%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV- 70
P IVVL G R+ L G K+ +G
Sbjct: 74 RQTPQASKAEYIVVLGGGYTYNAEWAPSSNLISNSLPRVTEGVRLYHANPGAKLIFTGGA 133
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ VS + + + I I +TE A + + F L+VT
Sbjct: 134 AQGNP-VSSAKTAALVAESLGIPQQDIIILDTPRDTEEEAAATAKIVGERPF---LLVTS 189
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 ANHLPRAMRFFQA--QGLAPIPAP 211
>gi|254490468|ref|ZP_05103654.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464212|gb|EEF80475.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 276
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 31/181 (17%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRI------------ERAFE 55
F L + + ++ + + D P +V I+VL G ++ E A
Sbjct: 53 FSMLAYPVSDYLMYPLETRFALPEDLPDNVDGIIVL-GGAEKLKLSMSWKQAEVGEAAER 111
Query: 56 LLENQIGEK------IFISGVHHSVSKDILLQKIPIRQDLAEC------CIDIGYKALNT 103
+L+ + + +G + V L + + Q L + I +A NT
Sbjct: 112 ILKAAELSRRYPDVPVIYTGGSNLVQMQNLDTQGSVSQTLLTQAGIDKQRLIIETQARNT 171
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII--SHDLEENS 161
N K + ++VT +H+PR+ +++ + IPYP+ S +E
Sbjct: 172 AENFFYIKPLLPKQQ-GNYILVTSAFHIPRSVGIARKL--GIDVIPYPVDYRSSRPDERY 228
Query: 162 S 162
Sbjct: 229 W 229
>gi|196232763|ref|ZP_03131614.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223223|gb|EDY17742.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 225
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 55/205 (26%), Gaps = 31/205 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD-------HPSVSAIVVL-------TGEP 47
R FW L + F+ +V P +VL G
Sbjct: 9 RSFWLVLTALALLFVAFVAGANYWVIHSTREAIFTDLALLPKTDVALVLGTSRYNGDGHS 68
Query: 48 ------IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYK 99
R+ A L + +SG + V D ++ I + + I + Y
Sbjct: 69 PNPFFLGRMNTAARLYHEGKVRHLLVSGDNGHVGYDEPTWMRDALIARGVPRSAITLDYA 128
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
T + A IVT D+H+ R+ + V +
Sbjct: 129 GFRTLDSMARAKN---VFGLQRFTIVTDDFHISRSVFLARSYGLDV------VGFPSERV 179
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
K R L + L + +
Sbjct: 180 AYWWSKKVRTRELASRTVAFLEVYL 204
>gi|284049952|ref|ZP_06380162.1| hypothetical protein AplaP_00605 [Arthrospira platensis str.
Paraca]
gi|291568189|dbj|BAI90461.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 229
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI+ A +L + EKI ++G + ++ + +Q I Q + I + Y +T
Sbjct: 81 ADRIQGAIDLYKLGRVEKILMTGDNGTPEYNEVVAMQLYAIDQGVPSNDIRLDYAGFSTY 140
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++T YH+PR
Sbjct: 141 ESCYRAREIF---GIETAVLITQQYHLPRAVY 169
>gi|328543434|ref|YP_004303543.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
gi|326413179|gb|ADZ70242.1| DUF218 protein [Polymorphum gilvum SL003B-26A1]
Length = 265
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
S ++ ++ LA + + ++LNT NA A E L+VT HMP
Sbjct: 137 SSTEAEGAAQLFESFGLAPDRLVLEDRSLNTWQNAVYTKALVEPRAGQTWLLVTSAMHMP 196
Query: 133 RTFLELQRINSTVQFIPYPI------ISHDLEENSSIFKIKI-LRVLLIEYLKILLLSI 184
R ++ +PYP+ L ++ L + E++ ++
Sbjct: 197 RAVGVFRKAG-WTGVVPYPVDWRTRGPEDRLRVFGAVSDGLTRLDIAFREWVGLVAYRA 254
>gi|292558336|gb|ADE31337.1| hypothetical protein SSGZ1_0880 [Streptococcus suis GZ1]
Length = 336
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 24/161 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---------HPSVSAIVVLTGE------- 46
F + ++ F+S+ + ++ + +VVL
Sbjct: 122 LSAISFFNMVFVYVGFFVSYTIIISMLYTMSSFVNLVNFFPGKLDYVVVLGAGLIGDKVT 181
Query: 47 ---PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RIE+ + + Q G K+ +SG +++ + + + + I I ++
Sbjct: 182 PLLASRIEKGIAIYQKQPGSKLIMSGGQGPDELIAEGQAMANYALEKGVPAEDILIENQS 241
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
NTE N + + A + +VT+ YH+ R L +++
Sbjct: 242 TNTEENLKFSYALMKPG--SRFALVTNYYHVFRALLLARQL 280
>gi|294629212|ref|ZP_06707772.1| SanA protein [Streptomyces sp. e14]
gi|292832545|gb|EFF90894.1| SanA protein [Streptomyces sp. e14]
Length = 219
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 51/176 (28%), Gaps = 21/176 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTGE-----------PIR 49
R + VC++ + ++ ++ D P +V R
Sbjct: 10 RLVQAVMAVCVLALLPATWLYVSTGDRLRTTADAPRTDVAIVFGAGLWHGGEPSPYLAHR 69
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ A L + + ++G + D ++ R + I Y +T +
Sbjct: 70 LDAAVTLYREGRIKVVLVTGDNSRTDYDEPDAMRAYLTRHGVPGARIVSDYAGFDTWDSC 129
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
A + ++V+ +H+ R Y + + + +
Sbjct: 130 VRAK---KVFGVDRAVLVSQGFHIRRAVALCDAAGVD----SYGVGVDAVHDVTWY 178
>gi|56476708|ref|YP_158297.1| hypothetical protein ebA2301 [Aromatoleum aromaticum EbN1]
gi|56312751|emb|CAI07396.1| probable transmembrane protein [Aromatoleum aromaticum EbN1]
Length = 258
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 29/184 (15%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFELLENQIGEKI--------FISG 69
+ AIV++ G R + R L + G ++ +SG
Sbjct: 76 PPLTATSARPAEAIVIVGGGKRRHAPEYGGETVNR-LTLERLRYGARLAHGLRLPVLVSG 134
Query: 70 VHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ + + + + ++ +L+T NA+ ++ + VL+VT
Sbjct: 135 GAPTGERPEGELMKAALETDFGIIPRWVEA--SSLDTGQNAEFSAPLLKAAGVRRVLLVT 192
Query: 127 HDYHMPRTFLELQR------INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
H HM R E + T + L S E+L +L
Sbjct: 193 HAAHMRRARAEFEARGIEVIAAPTAWLGRHDANDQVLTALPSATSAYAGWYAAHEWLGLL 252
Query: 181 LLSI 184
L +
Sbjct: 253 ALRL 256
>gi|189500837|ref|YP_001960307.1| hypothetical protein Cphamn1_1910 [Chlorobium phaeobacteroides BS1]
gi|189496278|gb|ACE04826.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 251
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 59/179 (32%), Gaps = 29/179 (16%)
Query: 2 RYFWYGLFVCLIFFI---MGFISFIRYVKQMH----IPDHPSVSAIVVLTG--------- 45
++ L + L++ + + +R ++ + + A+VVL G
Sbjct: 30 KWIVVWLGIVLLWVLSMPITGDWLMRQIEGVETRVVVESLEQGDAVVVLGGVLWQVPSVR 89
Query: 46 ------EPIRIERAFELLENQIGEKIFISGVH----HSVSKD-ILLQKIPIRQDLAECCI 94
R E E+ + G + +L + IR + E +
Sbjct: 90 YGEWGEAADRFEGGVEVFRAGKAPLLIFMGAKMPWMPDTRPEGEILAERAIRLGVPEEAV 149
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ + NT A+ V++VT +HM R + + ++ P+P+
Sbjct: 150 RVTERVGNTADEARAVKELLAGIERPEVILVTSAFHMNRASMLFRNA--GIEVQPFPVD 206
>gi|170719815|ref|YP_001747503.1| hypothetical protein PputW619_0629 [Pseudomonas putida W619]
gi|169757818|gb|ACA71134.1| protein of unknown function DUF218 [Pseudomonas putida W619]
Length = 253
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 21/135 (15%)
Query: 36 SVSAIVVLTGEPIRIERA-----------------FELLENQIGEKIFISGV-HHSVSKD 77
AIVVL R + A L G + SG H+
Sbjct: 79 RADAIVVLGAGRERGDPAWGGEDQPSATALERMRFAARLAKASGLPVLTSGGLHYGTPPS 138
Query: 78 ILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ + +A T NAQ ++ + V++VT +HM R+
Sbjct: 139 EAQLMADRLREDFAVEVKWKEEASRTTWENAQFSAQLLKPLGIGRVVLVTQAWHMQRSRW 198
Query: 137 ELQRINSTVQFIPYP 151
++ + IP P
Sbjct: 199 SFEQA--GFEVIPAP 211
>gi|309778681|ref|ZP_07673455.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
gi|308922531|gb|EFP68154.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 62/188 (32%), Gaps = 19/188 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFEL 56
L + L+F I FI + V + V A +VL G RI A
Sbjct: 20 LMLALLFAIGLFIVAWQIVSYGEQSFNAPVDAAIVL-GAAVWGNKPSPVYRERINEAITR 78
Query: 57 LENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+N+ + +G S+ + ++ I+ + I + T N A
Sbjct: 79 YQNKQVRYLVFTGGTPGADYPSEGKVGREYAIKHGVPPDAILAETTSRTTWQNLVNAKKL 138
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+ H VL+V+ H+ R + + + P + S + L +
Sbjct: 139 LDPLGIHTVLLVSDPLHLRRA----TAMANDIGLQALPGPTSSSRFESLSTRANFLWREI 194
Query: 174 IEYLKILL 181
YL L+
Sbjct: 195 WLYLDYLI 202
>gi|223933030|ref|ZP_03625024.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|302023799|ref|ZP_07249010.1| membrane protein [Streptococcus suis 05HAS68]
gi|330832826|ref|YP_004401651.1| hypothetical protein SSUST3_1032 [Streptococcus suis ST3]
gi|223898347|gb|EEF64714.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|329307049|gb|AEB81465.1| protein of unknown function DUF218 [Streptococcus suis ST3]
Length = 336
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFE 55
Y + + +++ F++F+ + +VVL RI++
Sbjct: 141 YAIIISMLYTTSSFVNFVNLFPG-------KLDYVVVLGAGLIGDKVTPLLASRIDKGIA 193
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ + Q G K+ +SG +++ + + Q + I I ++ NTE N + + A
Sbjct: 194 IYQKQPGSKLIMSGGQGPDELIAEGQAMANYALEQGIPAEDIIIENQSTNTEENLKFSYA 253
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ +VT+ YH+ R L +++
Sbjct: 254 LMKPG--SRFALVTNYYHVFRALLLARQL 280
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 16/152 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-----TGE------PIRI 50
+ + L L F +G I V D +VL T R+
Sbjct: 8 KRLFLSLVAVLGFLHLGTIVL---VIAGLRDDLGHADVGLVLGSKVETNGTPSTRLRARL 64
Query: 51 ERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+R E +I +SG + I+++ + L I + K + T +A+
Sbjct: 65 DRTLECYRAGYFPEIIVSGGIGKEGYDEAIVMRDYLVAHGLPGEHILLDNKGVTTFASAR 124
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
A++ NFH V +++ +H+PR L L R
Sbjct: 125 NTRDIAQQRNFHSVFVISQYFHLPRARLALHR 156
>gi|298489000|ref|ZP_07007023.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156498|gb|EFH97595.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 256
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 49/177 (27%), Gaps = 35/177 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS---------FIRYVKQMHIPDHPS--------VSAIVVL 43
+R L +G + F + P AIVVL
Sbjct: 27 LRRSRPSLAAAFFAVGLGGLWLMSLPVAVEFAARKMERVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIIAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
D G A T NA +A + V++VT +HM R ++
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEKAG 203
>gi|261821327|ref|YP_003259433.1| hypothetical protein Pecwa_2047 [Pectobacterium wasabiae WPP163]
gi|261605340|gb|ACX87826.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 282
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 27/144 (18%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV- 70
P + IVVL G R+ L G K+ +G
Sbjct: 74 RQTPQADNAEYIVVLGGGYTYNAEWAPSSNLISNSLPRVTEGVRLYHANPGAKLIFTGGA 133
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ VS + + + I I +TE A + F L+VT
Sbjct: 134 AQGNP-VSSAKTAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGARPF---LLVTS 189
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
H+PR Q + IP P
Sbjct: 190 ANHLPRAIRFFQA--QGLAPIPAP 211
>gi|261410038|ref|YP_003246279.1| hypothetical protein GYMC10_6269 [Paenibacillus sp. Y412MC10]
gi|261286501|gb|ACX68472.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 194
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 36 SVSAIVVL-----TGE-----PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKI 83
A++VL G R++ A + E I +SG V S+ L++K
Sbjct: 31 KADALIVLGYVSKDGRIHPLLKERLDEACKQFRQYGHEYIIVSGGAVGSRRSEAELMKKY 90
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + + + K+ NT N + E+ +I+T+ +H+ RT + R+
Sbjct: 91 LVEKGIPAKRVLKEDKSNNTVQNLIFSKQLMEQYQLKSFVIITNLFHVRRTKYIMHRLG 149
>gi|322389504|ref|ZP_08063055.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
gi|321143779|gb|EFX39206.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
Length = 324
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 32 PDHPSVSAIVVLTGE----------PIRIERAFELLENQIGE-KIFISGV---HHSVSKD 77
P AI++L R+++ + E G K+ +SG +++
Sbjct: 137 PVRKEPDAIIILGSGLIGDKVPPLLAQRLDKGKAIYEQFEGRPKLIVSGGQGSDELIAEA 196
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
+ + + E I I ++ T N + E+ VL+VT+ +H R +
Sbjct: 197 EAMAGYLMEHGVPEDAILIENRSRTTFENLTFSKRLLEEEGLGKRVLVVTNSFHALRAGV 256
Query: 137 ELQRI 141
++R+
Sbjct: 257 FMRRL 261
>gi|325276217|ref|ZP_08142016.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
gi|324098646|gb|EGB96693.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
Length = 253
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 21/136 (15%)
Query: 36 SVSAIVVLTGEPIRIE---------RAFEL--------LENQIGEKIFISGV-HHSVSKD 77
AIVVL R + A L L G + SG H+
Sbjct: 79 RADAIVVLGAGRERGDPAWGGGDQPTATALERMRFAARLAKASGLPVLTSGGLHYGTPPS 138
Query: 78 ILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ + +A T NAQ ++ + V++VT +HM R+
Sbjct: 139 EAQLMADRLREDFAVEVRWREEASRTTWENAQLSAKVLQPLGIRRVVVVTQAWHMQRSRW 198
Query: 137 ELQRINSTVQFIPYPI 152
++ + +P P+
Sbjct: 199 SFEQA--GFEVVPAPV 212
>gi|255023117|ref|ZP_05295103.1| hypothetical protein LmonocyFSL_06015 [Listeria monocytogenes FSL
J1-208]
Length = 189
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L + +SG S ++ ++++ + + +A I + K+ T
Sbjct: 60 QERLDAAVAYLNEYPKVNVIVSGGQGADESTAEAEVMEEYLVNEGIARKRIAMETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSNE---KFELGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|254409604|ref|ZP_05023385.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183601|gb|EDX78584.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 198
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + + + + G+ Y+ Q AI+VL GE R A + +
Sbjct: 16 VRLLSWLMPILAVSLFCGYKQIQSYLIQPE--------AILVLGGEEERELFAADFAQQH 67
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S S + + K I ++ I +A +T N +
Sbjct: 68 PDLHIWVSSGSPSWYTEKVFAKAGIPRNHLH----IDRRATDTVTNFTTLVDELKAQGID 123
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V ++T D HM R + E+ + + P P+ E R LL
Sbjct: 124 GVYLITADDHMLRARVIGEIVFGSRGITLKPVPVSLGRDPEPIEKSLRDGARALL 178
>gi|88801181|ref|ZP_01116724.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
gi|88776084|gb|EAR07316.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
Length = 261
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 61/197 (30%), Gaps = 31/197 (15%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAF-------------ELLENQIG 62
+ ++ + + + I+VL G R + + +L +
Sbjct: 59 VGAWLVYPLEHRFKPPNTEQAPDGIIVL-GGAWRTQSSVYWGQWELNHAAERDLAMLALA 117
Query: 63 EK-----IFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ + +G + + +++ L + ++ NT NA+ +
Sbjct: 118 RRFPEAELVFTGGSGKLFSQQFKEADVARQLYSDLGLNPVRVQFESESRNTYENARFSQK 177
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS---HDLEENSSIFKIKIL 169
+ +VT YHM R I + +PYP+ + F +
Sbjct: 178 LINPDVADIWWLVTSAYHMTRATEVFCGI--GWRVVPYPVDHFYEPGSWRPNWAFADHLW 235
Query: 170 RV--LLIEYLKILLLSI 184
+ + E+L + +
Sbjct: 236 ELERVSREWLGLWVYRA 252
>gi|2181195|emb|CAA73878.1| hypothetical protein [Bordetella pertussis]
Length = 179
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 42/138 (30%), Gaps = 21/138 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + P+ AIVVL G
Sbjct: 44 LLWALAWSLPATSLWLGG--ALESRYPHLPPDQSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A EL + K+ +SG +S+ + + + E + + +
Sbjct: 102 ETAVVRVDTATELFQAGRASKVVLSGGALEGDISEARGMAYRMRQHGVPESALILENASR 161
Query: 102 NTEGNAQEASAWAEKNNF 119
T NA ++
Sbjct: 162 TTYENAALTEDTLRQHGI 179
>gi|188575890|ref|YP_001912819.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520342|gb|ACD58287.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 253
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 7/151 (4%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ +++ + + + + +
Sbjct: 93 YGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 153 SMNTLQNAQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSI 212
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V L EYL + + + +
Sbjct: 213 LPQSYNFTLADVALHEYLGMARYRLYQWMGS 243
>gi|319950773|ref|ZP_08024662.1| hypothetical protein ES5_14263 [Dietzia cinnamea P4]
gi|319435564|gb|EFV90795.1| hypothetical protein ES5_14263 [Dietzia cinnamea P4]
Length = 193
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFIS--GVHHSVSKDILL 80
++ Q + A+V+L G + R A +L+E + + +S G + L
Sbjct: 37 AFLLQPRGDEPVRADAVVMLAGADDGRHLYARDLVEAGYADTLLVSNPGGNSETVARRLC 96
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
I + + + T G A A A + VL+VT+ H R ++
Sbjct: 97 --TGIARPADAEVVCFSPEPRTTWGEALAVDAIARARGWERVLVVTNRPHTLRAGTWMRN 154
Query: 141 INS-TVQFIP 149
V+ P
Sbjct: 155 ATDLDVRMTP 164
>gi|255524874|ref|ZP_05391823.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|255511444|gb|EET87735.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
Length = 327
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 17/152 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV----LTGEP-------IR 49
R + + + + F S + Y + +P + I+V L G R
Sbjct: 120 RTLFSLVLILEFYIAFTFASLLIYSLIYTCLPKRLNCDYIIVHGCGLIGGERVSPLLKGR 179
Query: 50 IERAFELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+++A + + KI +SG +S+ ++ + E I + ++ T
Sbjct: 180 VDKAVHIYHKCRQHTKIVVSGGKGDDEKISEAAAMKNYLVETGFPEDDIILEEQSKTTFE 239
Query: 106 NAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
N + + N H + VT++YH+ RT L
Sbjct: 240 NLKNVKDMLDVNGVKHRYIFVTNNYHVFRTSL 271
>gi|255319326|ref|ZP_05360543.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262379770|ref|ZP_06072926.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303719|gb|EET82919.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262299227|gb|EEY87140.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 379
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 39/184 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGV 70
+ ++ AIVVL G +R+E+ E+ + + SGV
Sbjct: 203 EPVYPASSSKPYAIVVLGGGLTLADNQKDIVVNKYTRLRLEKTLEVEKQYHLPIVL-SGV 261
Query: 71 HHSVSKDILLQKIPIRQDLAECCI---DIGYKALNTEGNAQEASAWAEKNN-FHHVLIVT 126
++ L E + + +++NT N++ +S +K V+++T
Sbjct: 262 E----------APYMQAWLKERNVEAKLLENRSMNTCENSRFSSLLLQKKGGAPTVILIT 311
Query: 127 HDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
YHMPRT + ++ IP P+ S + S R E +L +I
Sbjct: 312 DVYHMPRTRRLF--ALNGIETIPVEAPMPSKLTDWRPSRQNYDHSRRANYE----MLATI 365
Query: 185 QLSL 188
+ L
Sbjct: 366 RDIL 369
>gi|89076218|ref|ZP_01162571.1| hypothetical protein SKA34_04145 [Photobacterium sp. SKA34]
gi|89048104|gb|EAR53690.1| hypothetical protein SKA34_04145 [Photobacterium sp. SKA34]
Length = 226
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 11/149 (7%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-VHH------SVSKDILLQKIPIRQ 87
I VL R+ ERA EL + + I SG V + S+ KI +
Sbjct: 24 KSDYIFVLGSNDERVAERAVELYKQGLAPYIIFSGGVGELTEGLFNTSEAEHFAKIALDM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTV 145
+ + I I ++ NT N ++ ++V + RT ++ +
Sbjct: 84 GVPKGAILIEPESTNTGENVLFTRRLLQQKGLTPRSFILVQKPFMERRTLATFEQQWPHM 143
Query: 146 Q-FIPYPIISHDLEENSSIFKIKILRVLL 173
Q + P I+ D N +I ++ V++
Sbjct: 144 QAIVTSPQINFDDYANDAISFGDLINVMV 172
>gi|86146806|ref|ZP_01065126.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
gi|85835456|gb|EAQ53594.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
Length = 253
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 64 KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
K+ +SG ++ V++ + Q+ +R + I ++NT NAQ S + + F
Sbjct: 114 KVIVSGGDAQNNGVTEAEVYQQQLLRLGVPLADIIQESNSVNTWKNAQLTSDLMKHHQFD 173
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
++++V+ H+ R+ L V P+ + + S
Sbjct: 174 NIVLVSSGLHIRRSELYFNHFGLNV----IPVRADYMAAQISW 212
>gi|331268940|ref|YP_004395432.1| hypothetical protein CbC4_0755 [Clostridium botulinum BKT015925]
gi|329125490|gb|AEB75435.1| conserved protein [Clostridium botulinum BKT015925]
Length = 262
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ E L+ KI +SG +++ +++ I+ + I K+ NT
Sbjct: 127 RMDTTLEYLKKYPNTKIIVSGGKGPGELITEAEAMKRYLIQNGINHDQIIKEEKSRNTAE 186
Query: 106 NAQEASAWAE---KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N + + + K + V +VT D+HM R +R V +P
Sbjct: 187 NFKYSLEILKQREKKDNPSVCVVTTDFHMFRAKFLAKRAGINVHAVP 233
>gi|254457969|ref|ZP_05071396.1| integral membrane protein [Campylobacterales bacterium GD 1]
gi|207085362|gb|EDZ62647.1| integral membrane protein [Campylobacterales bacterium GD 1]
Length = 243
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 8/145 (5%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R + G K+ +G +S + +++ + + E I +G KA +T
Sbjct: 101 GTRRALEGIIIYNQTEGSKLIFTGFGGDEKISVAKMNKRLALALGVKEEDIILGEKAKDT 160
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE---N 160
+ A F ++VT H+PR+ + + I P
Sbjct: 161 QEEAYFTKELVGDEPF---VLVTSASHIPRSMMLFESIGLKPIAAPTAFYKDKFRSFLKL 217
Query: 161 SSIFKIKILRVLLIEYLKILLLSIQ 185
++ + ++ + EYL IL ++
Sbjct: 218 PTMGSFYLSQIAMHEYLGILWSKLR 242
>gi|331083076|ref|ZP_08332193.1| hypothetical protein HMPREF0992_01117 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405078|gb|EGG84615.1| hypothetical protein HMPREF0992_01117 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 200
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 21/149 (14%)
Query: 51 ERAFELLENQIGEKIFISGVHH-------SVSKD------------ILLQKIPIRQDLAE 91
E A +L + I SG + V + L+++ + ++E
Sbjct: 37 EEAAKLYHQGLAPYILPSGKYSILNGKFAGVQEKQELYDGEYETEWEFLKEVLKKNQVSE 96
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I KA T NA + + ++ YH R+ L Q + QF
Sbjct: 97 EHILREDKATYTYENAIYSRKVTDCLGMEIKKAILCCKPYHARRSLLYYQLLYPETQFFV 156
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK 178
PI D++ + K +R++ E K
Sbjct: 157 RPIQDSDVKRENWYLTEKGIRLVFGEVQK 185
>gi|329945798|ref|ZP_08293485.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528246|gb|EGF55224.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 280
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A +L + E I +SG + V D +++ + + I + Y +T
Sbjct: 125 RLDTAADLYTSGRVEAILVSGDNRRVGYDEPTVMRDYLTSKGIPSQAIALDYAGFDTYDT 184
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A L+VT D+H PR
Sbjct: 185 CVRARRIF---GIERALLVTQDFHEPRAVA 211
>gi|312883139|ref|ZP_07742870.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369299|gb|EFP96820.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 265
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 39 AIVVL--TGEPI----RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLA 90
I+VL T R++ A+++ E I +SG V + + IR+ L
Sbjct: 50 GIIVLGSTPGKGILERRLDDAYKMAEEDKSLPIILSGKGRKEDVVEADYMYNYLIRKGLN 109
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +L+T GNA+ + +N + L++T+++H R+ Q I
Sbjct: 110 GERLYKESLSLDTVGNAEFSYFTITENESLKDIRDWLVITNNFHAMRSLNTFQYIFPDNY 169
Query: 147 --------FIPYPIISHD 156
+P + + D
Sbjct: 170 RLEVYLAPLLPEGVTNPD 187
>gi|307353054|ref|YP_003894105.1| hypothetical protein Mpet_0899 [Methanoplanus petrolearius DSM
11571]
gi|307156287|gb|ADN35667.1| protein of unknown function DUF218 [Methanoplanus petrolearius DSM
11571]
Length = 182
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV--HHSVSKDI--LLQKIPIRQDLAECCIDIGYKALN 102
R++ ++ G + +SG + + +++ + + + I +L+
Sbjct: 27 KGRMDCGLKVFRE-EGGILLLSGGRSNPEIDVPECGIMKDYAVGRGVDPSNIITEDSSLD 85
Query: 103 TEGNAQEASAWAEKNN-FHHVLIVTHDYHMPRTFLEL 138
T GNA + +K + + ++T YH+ R+
Sbjct: 86 TIGNAVFSREIVDKLDAVSKIFVITSCYHVERSRYLF 122
>gi|319893318|ref|YP_004150193.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317163014|gb|ADV06557.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 260
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 77/200 (38%), Gaps = 31/200 (15%)
Query: 5 WYGLFVCLIFFIMGF--ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ L I F+ + F+ + H+P + I+VL R++R
Sbjct: 58 FQLLVQLAIVFLTAWQTYLFMTFTFLHHLPPVTRAN-IIVLGAGIYTEAVTPMLKARLDR 116
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L I +SG +S+ + +Q+ I+Q +A I + ++ NT N
Sbjct: 117 AIALSRQLEKFHIIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYY 176
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + + H +IVT +H+ R E Q++++ P P + +
Sbjct: 177 SKHYLALHQQPHTIIVTSSFHILRALRLAERQQLHAFGYGAPTP--------HHWVS--- 225
Query: 168 ILRVLLIEYLKILLLSIQLS 187
R L+ +Y +L ++
Sbjct: 226 --RELIRDYSGLLFQYPRVW 243
>gi|330505003|ref|YP_004381872.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
gi|328919289|gb|AEB60120.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
Length = 256
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 60/189 (31%), Gaps = 22/189 (11%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMH-IPDHPSVSAIVVLTGEPIRIERA--------- 53
W ++ + G + +++ AIV+L + +
Sbjct: 46 LWLMSLPAVMQWSAGLLEREPALEEARWATLAQRADAIVILGAGREQNDPGWGGADQPGL 105
Query: 54 FELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCIDIGY---------KALNT 103
L + ++ SG+ + + + + P L + Y ++ T
Sbjct: 106 MALERLRYAARLARASGLPMAATGGLHYGQPPSEAALMADAMKRDYGLEIRWLEEQSRTT 165
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENS 161
NA ++ + V++VT +HMPR ++ V P Y +
Sbjct: 166 WENAVLSADLLQPQGVRRVVLVTQAWHMPRARWSFEQAGFEVISAPMGYLSAGYARPLGG 225
Query: 162 SIFKIKILR 170
+ + +++
Sbjct: 226 WLPESRVIW 234
>gi|300691119|ref|YP_003752114.1| hypothetical protein RPSI07_1461 [Ralstonia solanacearum PSI07]
gi|299078179|emb|CBJ50822.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 265
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 33/161 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
W ++ ++ R + P P VVL G ++
Sbjct: 44 WVLGIALIVAWMAATPWCGRLLASWTHPVPPLRLDALQPRGEGAVVLLGGSRKLAAREYA 103
Query: 53 --------AFELLENQIGEKI--------FISGVHHS---VSKDILLQKIPIRQDLAECC 93
L ++ +G V + L++++
Sbjct: 104 GQGATALSGPSLERTVYAARLAHTARLPVLATGGAPEGDGVPEAELMRRLVADMGQDARW 163
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
I ++ TE NA ++ + +VTH +HM R
Sbjct: 164 I--ETRSATTEENAAFSAPILRAAGIQRIYLVTHYWHMARA 202
>gi|152992958|ref|YP_001358679.1| hypothetical protein SUN_1369 [Sulfurovum sp. NBC37-1]
gi|151424819|dbj|BAF72322.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 251
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI----SGVHHSVSKDILLQK 82
+ + I + AIV R+ L G I G+H + +K
Sbjct: 93 RTLPITSQLASEAIV-------RLNEGIRLYRQLEGNATIILSGYEGLHDPTPHAFMQEK 145
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + + + A +TE AQ A A+ +++VT YHMPR ++
Sbjct: 146 LATALGIDPKDLILRTTAKDTEEEAQAARQIAKDQ---PLILVTSAYHMPRAMGWFEK-- 200
Query: 143 STVQFIPYPIISHD 156
+ +P P
Sbjct: 201 EGLHPVPAPTYHQA 214
>gi|28871924|ref|NP_794543.1| hypothetical protein PSPTO_4809 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855177|gb|AAO58238.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 256
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 39/186 (20%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIRPLPQQQWATLAQQADAIVVL 86
Query: 44 ----------------TG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
TG R+ A L + + G+H
Sbjct: 87 GNGRERNSPTWGADTPTGLGLERLRLAARLAKESGLPILTAGGLHFDQPPSEASIMAQAL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
Q + + ++ + T NA +A + V++VT +HM R ++
Sbjct: 147 QQDFG--VTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVLVTQAWHMSRARWSFEQAGF 204
Query: 144 TVQFIP 149
TV P
Sbjct: 205 TVVSAP 210
>gi|166368729|ref|YP_001661002.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
gi|166091102|dbj|BAG05810.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
Length = 227
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 14/155 (9%)
Query: 5 WYGLFVCLIFFIMGFISF---IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
W L L+F GFI F I ++ I V AI+VL G IR E L Q
Sbjct: 18 WLKLTPILVF---GFIIFNLAINLAIRLPINQQKPVDAILVL-GGSIRREIYVANLAQQY 73
Query: 62 GEK-IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ I IS SKD + + R + + + A +T GN A ++ H
Sbjct: 74 PDIPILIS----QGSKDPCILLLFERAKAPKTNVWLEKCADSTFGNFFFAVPILKQWGVH 129
Query: 121 HVLIVTHDYHMPRT--FLELQRINSTVQFIPYPII 153
V +VT H+PR + + + +
Sbjct: 130 KVKVVTSPTHLPRAKWLAAIHLQSHGIAVEIDAVR 164
>gi|114321439|ref|YP_743122.1| hypothetical protein Mlg_2290 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227833|gb|ABI57632.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 252
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 56/191 (29%), Gaps = 36/191 (18%)
Query: 26 VKQMHIP-----DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGE 63
++Q H P DHP AIVVL R+ L +
Sbjct: 64 LEQRHPPVHDARDHPEAQAIVVLGSGYSPHLALPVTAQLNDSGLVRLNEGIRLHRQRPAL 123
Query: 64 KIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ +SG ++ I +A+ + + +T A +
Sbjct: 124 PLIVSGGARPDQAPIAEGFRRAAIALGVADDRLLPLTEPRDTAQEAYATREVLGEGA--T 181
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS-----SIFKIKILR---VLL 173
VL+VT H+ R R + IP P I LR L
Sbjct: 182 VLLVTSASHIHRAQAHFHRA--GLNPIPAPTRHKAGHVRPATPGYWIPSATHLRKSERAL 239
Query: 174 IEYLKILLLSI 184
EY+ +L +
Sbjct: 240 YEYMGLLAAGL 250
>gi|330987615|gb|EGH85718.1| hypothetical protein PLA107_21508 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 256
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 35/184 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCI 94
R L ++ ++ SG+ + + + P + +
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLSKTSGLPILTTGGLHFDQPPSEASIMAQSL 146
Query: 95 --DIGYKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D G A T NA +A + V++VT +HM R + TV
Sbjct: 147 HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFETAGFTV 206
Query: 146 QFIP 149
P
Sbjct: 207 VSAP 210
>gi|295705080|ref|YP_003598155.1| hypothetical protein BMD_2965 [Bacillus megaterium DSM 319]
gi|294802739|gb|ADF39805.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 187
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP------IRI 50
M Y + G V I ISF Y + H P + ++VL G+ R+
Sbjct: 5 MIYTFIGSLVLYIAI----ISFYMY-QTAHKPVPQNADYVLVLGSKVDGDQMSPSLKERV 59
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L+ K+ ++G +S+ + ++ + + I ++ +T N
Sbjct: 60 KTALSYLQAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIKENQSTSTFENF 119
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + V++V++D+H+ R + +R V YP+
Sbjct: 120 TFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDV----YPL---------GAKTPN 165
Query: 168 ILRV--LLIEYLKILLLSI 184
+++ EY IL +
Sbjct: 166 SIKLQAYFREYAAILKTWL 184
>gi|308804261|ref|XP_003079443.1| unnamed protein product [Ostreococcus tauri]
gi|116057898|emb|CAL54101.1| unnamed protein product [Ostreococcus tauri]
Length = 417
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 33/134 (24%)
Query: 37 VSAIVVLTGEPI-----------RIERAFELLENQIGE-KIFISG--------------- 69
V AIVV+ G R++RA E E G KI +SG
Sbjct: 202 VDAIVVVAGGIEADGTLPPWVTPRLDRARERFEATGGRVKILVSGSMTPHKPPPMGPGGF 261
Query: 70 -VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW-AEKNNFHHVLIVTH 127
VH S S + + + + + +++T GNA + A + V +VT
Sbjct: 262 NVHESTS----MASYLMERGVPATAVLKDTASMDTIGNAYYSLCLHAIPLGWKRVEVVTS 317
Query: 128 DYHMPRTFLELQRI 141
+HM RT + +
Sbjct: 318 AFHMARTRAAFEWV 331
>gi|315187461|gb|EFU21217.1| protein of unknown function DUF218 [Spirochaeta thermophila DSM
6578]
Length = 249
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 26/190 (13%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVS--AIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
++ G + ++ + P+ +V L R+ +G + ++G
Sbjct: 71 VWDAGGGVRYVVVLGGGAQAGTPAGDVPGVVSLA----RLWGGLR-YARMLGVPLVLAGG 125
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S+ ++ + E + + ++ T NA+ + VL+VT
Sbjct: 126 SVWDEGKSEGEMMADLVRELGWEE--VVVEGESRTTWENARNTARMV---GRGPVLLVTS 180
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-------LRVLLIEYLKIL 180
YHM R + V+ IP P+ D IF + I ++ L EY+
Sbjct: 181 AYHMQRAVWCFRA--QGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVG-- 236
Query: 181 LLSIQLSLST 190
++ +++ +
Sbjct: 237 MVWYRVAYGS 246
>gi|218682013|ref|ZP_03529614.1| hypothetical protein RetlC8_24195 [Rhizobium etli CIAT 894]
Length = 262
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQ--DLAECCIDIGYKAL 101
R A L + +I +SG V + + + + ++
Sbjct: 105 ADRFVEALRLAQKFPQSRILVSGGDGSLSGVYEGDAAASERFFPLFGIGKDRLIEETQSR 164
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
T NA + H L++T +HMPR+ +++
Sbjct: 165 TTFENAVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKLG 205
>gi|323463635|gb|ADX75788.1| membrane protein [Staphylococcus pseudintermedius ED99]
Length = 317
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 77/200 (38%), Gaps = 31/200 (15%)
Query: 5 WYGLFVCLIFFIMGF--ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ L I F+ + F+ + H+P + I+VL R++R
Sbjct: 115 FQLLVQLAIVFLTAWQTYLFMTFTFLHHLPPVTRAN-IIVLGAGIYTEAVTPMLKARLDR 173
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L I +SG +S+ + +Q+ I+Q +A I + ++ NT N
Sbjct: 174 AIALSRQLEKFHIIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYY 233
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + + H +IVT +H+ R E Q++++ P P + +
Sbjct: 234 SKHYLALHQQPHTIIVTSSFHILRALRLAERQQLHAFGYGAPTP--------HHWVS--- 282
Query: 168 ILRVLLIEYLKILLLSIQLS 187
R L+ +Y +L ++
Sbjct: 283 --RELIRDYSGLLFQYPRVW 300
>gi|158313956|ref|YP_001506464.1| hypothetical protein Franean1_2122 [Frankia sp. EAN1pec]
gi|158109361|gb|ABW11558.1| protein of unknown function DUF218 [Frankia sp. EAN1pec]
Length = 228
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 69/207 (33%), Gaps = 22/207 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFIS-FIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
R+ + + + ++G + F + D + A++VL G R
Sbjct: 24 RWAARIVAIIVGIVLLGSVMTFGQVWWVGRGDDRRASDALIVL-GASQYDGRPSAILAAR 82
Query: 50 IERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A EL + + ++ G + ++ + + + + + ++T +
Sbjct: 83 LDHALELYRSGVAPRVITVGGNQPGDRFTEAEAAGSYLRDRGVPSSAVLVVPQGVDTLSS 142
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ + + ++VT +H R+ + I + + S ++
Sbjct: 143 LTAVAGLMDSRQWRSAVVVTDRWHSLRS----RAIADDLGV--DAVTSPATSGPANRGFG 196
Query: 167 KILRVLLIEYLKILLLSIQLSLSTQTA 193
+R +L E + + S A
Sbjct: 197 TQMRYILREGIGYRFYQLFHRASPSAA 223
>gi|166712483|ref|ZP_02243690.1| hypothetical protein Xoryp_13775 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 7/145 (4%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ +++ + + + + I
Sbjct: 93 YGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVGLAIPQADVIIEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 153 SMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSI 212
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
+ + V L EYL + +
Sbjct: 213 LPQSYNFTLADVALHEYLGMARYWL 237
>gi|300705462|ref|YP_003747065.1| lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299073126|emb|CBJ44484.1| putative lipoprotein transmembrane [Ralstonia solanacearum
CFBP2957]
Length = 251
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 31/188 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIERAF- 54
R + G + + ++ +AIV+L R++
Sbjct: 26 RALAAVSLALFVAIGCGPVPAWLLDSLEGPFEARPAVAWGKRNAIVLLGAGTRRVDGGVE 85
Query: 55 -------ELLENQIGE----------KIFISGV---HHSVSKDILLQKIPIRQDLAECCI 94
L+E KI +SG HH + + ++ + +
Sbjct: 86 PGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGIDAADV 145
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ ++NT NAQ + ++V+ H+ R+ L P P+ +
Sbjct: 146 LLEPNSMNTWQNAQFSRTALAAYAPERTVLVSSAIHLRRSLLYFTHFG----MTPTPVRA 201
Query: 155 HDLEENSS 162
DL+ S
Sbjct: 202 DDLQATPS 209
>gi|281209541|gb|EFA83709.1| hypothetical protein PPL_02776 [Polysphondylium pallidum PN500]
Length = 548
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 19/124 (15%)
Query: 47 PIRIERAFE----LLENQIGEKIFISG--------VHHSVSKDILLQK----IPIRQDLA 90
R+ A + L+ + SG + K + + +
Sbjct: 152 KDRVSTAVDAYVQLVNTGSNPLLIFSGKGKTGNNELDEYEYKSEAAAMKDLALALDDKVL 211
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS---TVQF 147
E I + + NT NA E + V +VT D+HM R Q + V F
Sbjct: 212 ESSIYLDLTSTNTAENALNTLGRLESDGISRVYVVTSDFHMLRAQYTFQTVFPAHIEVSF 271
Query: 148 IPYP 151
P
Sbjct: 272 HSTP 275
>gi|50121475|ref|YP_050642.1| hypothetical protein ECA2551 [Pectobacterium atrosepticum SCRI1043]
gi|49612001|emb|CAG75450.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 282
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 27/137 (19%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV----HHSV 74
IVVL G R+ L G K+ +G + V
Sbjct: 81 KADYIVVLGGGYTYNAEWAPSSNLISNSLPRVTEGIRLYHANPGAKLIFTGGAAQGNP-V 139
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S + + I I +TE A + F L+VT H+PR
Sbjct: 140 SSAKTAALVAESLGIPRQDIVILDTPRDTEEEAAATAKIVGDRPF---LLVTSANHLPRA 196
Query: 135 FLELQRINSTVQFIPYP 151
Q + IP P
Sbjct: 197 IRFFQA--QGLAPIPAP 211
>gi|83643535|ref|YP_431970.1| hypothetical protein HCH_00644 [Hahella chejuensis KCTC 2396]
gi|83631578|gb|ABC27545.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 251
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 64/222 (28%), Gaps = 47/222 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFI----SFIRYVKQMHIPDHPSVSA-----IVVLTGEPI---- 48
R L + + ++ F+ F + +P + +VVL G
Sbjct: 33 RRRKLALGMLGVVWLGLFVISTPWFSDKLMAPLESQYPPYAGQEVRYVVVL-GGYHESDS 91
Query: 49 --------------RIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAEC 92
RI + ++ +SG + +S ++
Sbjct: 92 SLPITSYIEGDAIYRIIEGMRVALLNPESRLLVSGYARTDPLSNAEAYARLAESLGFPRE 151
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
ID+ +T A A A + F +VT YHMPR + V P P
Sbjct: 152 RIDLQEDPRDTHEEALAAQARMGEQPF---ALVTSAYHMPRAMQLFE----GVGLHPIPA 204
Query: 153 ISHDL----EENSSIFKIKILRVLL------IEYLKILLLSI 184
+ +E L L EYL L ++
Sbjct: 205 PTGHTIKQHQELDWRRFRPALGGLAATQKAWHEYLGALWANL 246
>gi|225785360|emb|CAX32378.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 213
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSA-----IVVLTGEPIRIERAFELLENQIGEKIFIS 68
++G + ++ + + I+VL G+ R L + + + +S
Sbjct: 10 IVVVGLLFWLIAAGPLRPYRQALTNGKPPQLILVLGGDVDREHLGIRLARD-LNLPLVVS 68
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G + L+ ++ I + + Y+A +T GN HVL+VT +
Sbjct: 69 GGSNLEYAQWLVSEVGIPLSQ----VQLDYRAKDTLGNFTSLVDELRLKGIQHVLLVTSE 124
Query: 129 YHMPRTFL 136
H+PR+
Sbjct: 125 DHLPRSMA 132
>gi|257420188|ref|ZP_05597182.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257162016|gb|EEU91976.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 193
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHSETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|168186754|ref|ZP_02621389.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169295259|gb|EDS77392.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 253
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 19/164 (11%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEP-----------IRIE 51
+ L VC+ I FI + I + +P I+VL G R++
Sbjct: 62 LRFVLKVCISLGIASFIILESLIIYSGISNKNPKSDYIIVL-GAAVHGDYMSLILKERVD 120
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R+ E L K+ +SG +++ +++ + + I + T N +
Sbjct: 121 RSLEYLREYPSTKVIVSGGKGPGEFITEAEAMKRYLVENGVKNSQIIKEENSRTTAENFK 180
Query: 109 EASAWAE---KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+S E K V +VT ++HM R + +R V IP
Sbjct: 181 YSSKIIENMDKERTPTVSVVTTNFHMLRAKMLAKRSGLKVNGIP 224
>gi|146308799|ref|YP_001189264.1| hypothetical protein Pmen_3784 [Pseudomonas mendocina ymp]
gi|145577000|gb|ABP86532.1| protein of unknown function DUF218 [Pseudomonas mendocina ymp]
Length = 256
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 41/186 (22%)
Query: 2 RYFWYGLFVCLIFFIMGFI---------SFIRYVKQMHIPDHP-------SVSAIVVLTG 45
R F C + + G R +++ AIV+L
Sbjct: 29 RRFPRLATACFVAGVGGLWLMSLPAVVEWSARQLEREPALAEAQWPSLAQRADAIVIL-- 86
Query: 46 EPIRIERA------------FELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAEC 92
R E+ L + ++ SG+ + + + + P L
Sbjct: 87 GAGR-EQGDPGWGLVDQPGLMALERLRYAARLARASGLPLAATGGLHYGQPPSEAALMAD 145
Query: 93 CIDIGY---------KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ Y ++ T NAQ ++ + V++VT +HMPR ++
Sbjct: 146 VMQRDYGLEIRWREEQSRTTWENAQLSAELLQAQGVRRVVLVTQAWHMPRARWCFEQAGF 205
Query: 144 TVQFIP 149
V P
Sbjct: 206 EVITAP 211
>gi|326204163|ref|ZP_08194023.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
gi|325985674|gb|EGD46510.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
Length = 256
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 28/183 (15%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGE----------PIRIERAFELLEN 59
+ +++ F + + D V +++VL R++ + ++
Sbjct: 74 LFLIWLVSFAIITAVIITSAMSDKEQKVDSVIVLGAGLKGETPTLVLKKRLDYTLDYYKS 133
Query: 60 QIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
KI +SG + ++++ +++ ++ D+ E I + +T N + E
Sbjct: 134 NPDVKIIVSGGQGIGETITEAEAMKRYLVKHDIPENIILKEESSTSTYENMLYSKKAYEN 193
Query: 117 ---NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V+I+T+D+HM R + +R Y I S V L
Sbjct: 194 TIGKPLDKVMIITNDFHMFRAKILAKRAG----LKAYGISSG----TPWYIYPN---VCL 242
Query: 174 IEY 176
EY
Sbjct: 243 REY 245
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAF 54
+Y + IFF+ ++FI +VK P S IVVL RI++A
Sbjct: 142 FYFAVLVGIFFVTNILNFIHFVK-------PRYSYIVVLGAGLNGTEVTPLLASRIDKAI 194
Query: 55 ELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+L + + I SG +S+ ++ +RQ + + I + ++ NT N +
Sbjct: 195 KLWRRRPQDVTLIMSGGQGPDEVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFS 254
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ +IVT+ YH+ R+ + +R+
Sbjct: 255 YKLM-EKGREDFVIVTNYYHLLRSLILARRLG 285
>gi|167840324|ref|ZP_02467008.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 204
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)
Query: 44 TGEPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
T R+ A L + + K+ +SG + V + + + I + +
Sbjct: 39 TFSYSRVVEAASLYRDCRRARANADCKLIVSGGDARRNGVPEAAVYRDALIGLGIDAADV 98
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+++NT NAQ A + VL+VT H+ R+ L P+ +
Sbjct: 99 LSEPRSMNTWQNAQFTRAVLDGYRADRVLLVTSGIHLRRSVLYFSHFG----VAATPVRA 154
Query: 155 HDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
L+ + + L EYL I + +L A
Sbjct: 155 EYLQAVTFPLPLAHNFSVADLALHEYLGIARYRLYDALGWNQARTRPGD 203
>gi|326384925|ref|ZP_08206599.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196315|gb|EGD53515.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
Length = 210
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++RA L +I ++G + V + + + ++ + + A++T
Sbjct: 98 AQRLDRAASLARANPFNRIIVTGGNSWWLPVPEAMFMHAQLAQRGVTPLKVIEEPTAMST 157
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
NAQ A + N +IVT+D+HM R +
Sbjct: 158 VENAQRTVAMLKGLNASGAVIVTNDFHMKRALDNFR 193
>gi|325291319|ref|YP_004267500.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
gi|324966720|gb|ADY57499.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
Length = 216
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 16/121 (13%)
Query: 35 PSVSAIV-----VLTGE------PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQ 81
P AI+ VL R+ EL + KI +SG H D + ++
Sbjct: 38 PQAEAILILGAYVLPNGTVSGMLEDRLAVGDELYKMGKAPKIIVSGDHGQSDYDEVNSMK 97
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + I + + +T + A + ++IVT +YH+ R + + +
Sbjct: 98 SFLVHKGVPAQDIFMDHAGFSTYESMYRARDIFK---VQRLIIVTQEYHLKRAVFDARGL 154
Query: 142 N 142
Sbjct: 155 G 155
>gi|50085083|ref|YP_046593.1| hypothetical protein ACIAD1944 [Acinetobacter sp. ADP1]
gi|49531059|emb|CAG68771.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 384
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 39 AIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
AIVVL G +R+E+ EL E + I +SGV + L++
Sbjct: 220 AIVVLGGGLTLADNKKDIVVNNYTRLRLEKTLEL-EKKYNLPIVLSGVE-APYMQTWLKE 277
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRI 141
+ L + +++NT N++ +S +K V++VT YHMPRT
Sbjct: 278 RGVEAKL------LENRSMNTCENSRFSSLLLQKKGGAPTVMLVTDVYHMPRTRRLF--A 329
Query: 142 NSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ IP P+ + S R E LL +I+ L
Sbjct: 330 LNGIETIPVEAPMPTQLTTWQPSQQNYDHSRRANYE----LLATIRDML 374
>gi|159029637|emb|CAO87715.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 227
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 14/155 (9%)
Query: 5 WYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
W L + L+F GFI + I V AI+VL G IR E L Q
Sbjct: 18 WLKLTLILVF---GFIILNLATNLAIRWSINQQKPVDAILVL-GGSIRREIYVANLAKQY 73
Query: 62 GEK-IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I IS SKD + + R + + + A +T GN A ++ H
Sbjct: 74 PNIPILIS----QGSKDPCILLLFERAKAPKTNVWLEKCANSTFGNFFFAVPILKQWGVH 129
Query: 121 HVLIVTHDYHMPRT--FLELQRINSTVQFIPYPII 153
V +VT H+PR E+ + + +
Sbjct: 130 KVKVVTSPTHLPRAKWLAEIHLQSHGIAVEIDAVR 164
>gi|221066959|ref|ZP_03543064.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
gi|220711982|gb|EED67350.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
Length = 270
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 27/191 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVLTGE----------PIR 49
W + L +++ F + + P V +IVVL R
Sbjct: 75 ARLWSLAWAGLALWLISLFWFWSRLSGLGLSPQQVPPVQSIVVLGSGTLDGHPRPVLAAR 134
Query: 50 IERAFELLE-NQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEG 105
+++A +L GV + + + + R +A + + + +TE
Sbjct: 135 LDQAAQLARLQPQALVAVCGGVDWGEKESEAEVMARYLQQRHGIAAQRLVLEKLSTSTEL 194
Query: 106 NAQEASAWAEKNNFHH---VLIVTHDYHMPRTF-LELQRINSTVQFIPYPIISH---DLE 158
N + + + + +V+ D+H+ R + ++ V YP+ +
Sbjct: 195 NLKLSRPLLAERGVAADAPMAMVSSDFHLMRAMDIAKRQDLPQV----YPVAADTPLATR 250
Query: 159 ENSSIFKIKIL 169
N+ + + +
Sbjct: 251 FNAWLREYFAM 261
>gi|149920330|ref|ZP_01908800.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
gi|149818772|gb|EDM78214.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
Length = 221
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A EL E+ +K+ +SG HH D ++++ + + + + + L T
Sbjct: 66 EDRLAAALELYESGRAQKLILSGAHHRDDYDEVTVMRRWLEDRGVPPDDLYLDHAGLRTL 125
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +V+ D+H+PR
Sbjct: 126 DSMVRARE---VFGVERLAVVSQDFHLPRAVY 154
>gi|308275051|emb|CBX31650.1| hypothetical protein N47_E51620 [uncultured Desulfobacterium sp.]
Length = 180
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 21/176 (11%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHHSVSKDILLQ 81
Y+ +P P VVL G+ R A L++N++ I+ + S S +
Sbjct: 3 NYLFYTKLPVQP-ADVAVVLYGDEAENRENEAVRLIKNKLASNIYYPLYNRSYSVSSNNK 61
Query: 82 KIPIRQDLAECCIDIGY------KALNTEGNAQE----ASAWAEKNNFHHVLIVTHDYHM 131
L G+ +A+ N A + +N+F ++ V+ YHM
Sbjct: 62 IEEKSDTLLS---IAGFNYLRKDQAIKHYENTHIELLVAKDYIRRNHFKKIIFVSSSYHM 118
Query: 132 PRT-FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK---ILLLS 183
R + + + V+ Y ++ + + ++ + EY K L
Sbjct: 119 RRIKLISEELFDENVELY-YSSPEQYIKGLGWLINRREIKFVFSEYAKIAWFLFYR 173
>gi|307611505|emb|CBX01179.1| hypothetical protein LPW_28781 [Legionella pneumophila 130b]
Length = 250
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 22/122 (18%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSK 76
+P+V +VVL G R+ L + K+ +SG + +
Sbjct: 76 NPNVKWVVVLGGGQNIGEGMPANDLLTSASLKRLVEGVRLFRDLPDAKLLLSGGGSAGEQ 135
Query: 77 DI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
LL ++ + + I ++NT A+E +A + F +VT HMPR+
Sbjct: 136 SEALLLAELTKWFAIDPEKVVIETVSINTADQARELAAIVHDHPF---YLVTSAIHMPRS 192
Query: 135 FL 136
Sbjct: 193 MA 194
>gi|262402457|ref|ZP_06079018.1| SanA protein [Vibrio sp. RC586]
gi|262351239|gb|EEZ00372.1| SanA protein [Vibrio sp. RC586]
Length = 207
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL + +SG H S ++ +++ +R + I + Y T
Sbjct: 41 NRIDAAIELYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 100
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A E NNF LI+T +H R
Sbjct: 101 SIVRAKQIFETNNF---LIITQRFHCERALF 128
>gi|227890086|ref|ZP_04007891.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849530|gb|EEJ59616.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 346
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 77/200 (38%), Gaps = 27/200 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + L + + FIM + ++ ++I + +VVL RI R
Sbjct: 141 YLFINLVIIYLIFIMMMYTLTSWINLVNI-KTKKLDYVVVLGAGLMGKKVTPLLAARINR 199
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+ G KI +SG + + + + K + + + I + K+ T N
Sbjct: 200 GIEVYRRNPGSKIIMSGGQGPGEEIPEAVAMAKYAEEEGIPKQDIIVEDKSKTTRENLIF 259
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+ + + IVT+ YH+ R + +R+ +Q I Y + F +
Sbjct: 260 SHRLMKPD--SRFAIVTNSYHVYRALVLAKRL--GLQCIGYGAKTK------WYFTLNAF 309
Query: 170 RVLLIEYLKILLLSIQLSLS 189
+ E++ L ++ +L LS
Sbjct: 310 ---VREFIAYLTITWRLQLS 326
>gi|254185037|ref|ZP_04891626.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184215629|gb|EDU12610.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 298
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 39/233 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHP----SVSAIVVL---------TG- 45
R + G + +R ++ + +AIV+L TG
Sbjct: 69 RALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIAATGA 128
Query: 46 ------EPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLA 90
R+ A L + + KI +SG + V + + + + +
Sbjct: 129 VEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGID 188
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ +++NT NAQ + VL+VT H+ R+ L
Sbjct: 189 SADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFG----VAAI 244
Query: 151 PIISHDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ + L+ + I + L EYL I + +L A
Sbjct: 245 AVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLYNALGWNPARTRPGD 297
>gi|226309010|ref|YP_002768970.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
gi|226188127|dbj|BAH36231.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
Length = 242
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A +L I SG V++ +++ + + I + +T
Sbjct: 133 DRLQAALQLARQYPQSPIITSGGAPKAGVTEARAMREWLVANGVDPGRITEEGTSWSTVE 192
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
NA ++ V++V+ H+ R ++ +
Sbjct: 193 NALNSARILADRGATGVVVVSSANHVERAMVDFRVA 228
>gi|256958084|ref|ZP_05562255.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256948580|gb|EEU65212.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|315036298|gb|EFT48230.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 193
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG + ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|269120634|ref|YP_003308811.1| hypothetical protein Sterm_2025 [Sebaldella termitidis ATCC 33386]
gi|268614512|gb|ACZ08880.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 216
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL-- 79
+ V + D+ + S +V R+++ EL + ++I +SG H + D +
Sbjct: 44 YTGLVLGSMVFDNGTPSGVV-----RQRLDKTAELYKAGKIKRILVSGDHGQKNYDEVNS 98
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ +++ + I + + +T + A E V+++T +H+PR+
Sbjct: 99 MKNYLLKKGIPIEDIFLDHAGFDTYSSMVRAKEIFE---IDDVIVITQKFHLPRSV---- 151
Query: 140 RINSTVQFIPYPIISHD 156
I Y ++S+
Sbjct: 152 YIARKKGMNAYGVVSNP 168
>gi|300860463|ref|ZP_07106550.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307276161|ref|ZP_07557292.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
gi|300849502|gb|EFK77252.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306507155|gb|EFM76294.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
Length = 193
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG + ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|78484758|ref|YP_390683.1| hypothetical protein Tcr_0413 [Thiomicrospira crunogena XCL-2]
gi|78363044|gb|ABB41009.1| Conserved hypothetical protein; predicted membrane protein with
DUF218 [Thiomicrospira crunogena XCL-2]
Length = 272
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 28/169 (16%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPD--HPSVSAIVVLTGEP--------IRIERAF----- 54
++ F +G + ++ PD + I+VL G R E
Sbjct: 53 FIVLAFPIGDLLIQPLEQRFKAPDTLPKHIDGIIVLGGGEDLKRSLSWGRPELGIGGDRY 112
Query: 55 ---ELLENQIGEKIFI----SG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
+ L + I SG + ++ + L +++ + + + I + NT
Sbjct: 113 IGAKELATHYPKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDKRLIIESLSRNTY 172
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
N + A N L+VT +HMPR+ N + IPYP+
Sbjct: 173 ENFKFTKALLPDAN-GTYLLVTSAFHMPRSVG--IANNQNIHVIPYPVD 218
>gi|259503279|ref|ZP_05746181.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168734|gb|EEW53229.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 278
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 18/186 (9%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGE----------PIRIE 51
W V +G + F V + HP ++VL R+
Sbjct: 73 QLWLLTTVTAGLATVGLLIFSLAVGLLSWRLHPHHADYLIVLGAGLAQGKVPPVLAARLT 132
Query: 52 RAFELLENQIGEKIFISG--VH-HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
RA + + Q I +SG VH V++ + + L + +A NT N
Sbjct: 133 RAAQFWQRQPTVTIVVSGGRVHGDQVTEAAAMAAFLLECGLPPEKLLQESQARNTWQNLA 192
Query: 109 EASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ ++ V++VT +H+PR ++ +++ QF+P P H L
Sbjct: 193 YSQRLITQHWSGTGQPRVVVVTSSFHVPRAWIYSRQLGQRYQFLPAPTPWHYLPLALVRD 252
Query: 165 KIKILR 170
+ ILR
Sbjct: 253 YLGILR 258
>gi|312864360|ref|ZP_07724593.1| putative membrane protein [Streptococcus downei F0415]
gi|311100081|gb|EFQ58292.1| putative membrane protein [Streptococcus downei F0415]
Length = 338
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI++ E+ + ++ +SG +++ + K + Q + E I I ++ NT
Sbjct: 187 ASRIKKGIEIYQKHPDCRLILSGGQGKDELIAEGQAMAKYALSQGVPEKDIIIEDRSKNT 246
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N Q +S ++ IVT+ YH+ R L
Sbjct: 247 RENLQFSSHLMANKA--NLAIVTNYYHLFRALL 277
>gi|190576332|ref|YP_001974177.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
gi|190014254|emb|CAQ47898.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
Length = 258
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 38/235 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS----AIVVL-TG----------- 45
L + + Q P + AIVVL G
Sbjct: 25 ALLAVAPLAILASASAPITQLLLDLAQDAPPSTATAHHPRTAIVVLGAGIDQDAHGSRPG 84
Query: 46 --EPIRIERAFELL----ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY- 98
R+ A + + +SG + + D + ++L + +
Sbjct: 85 LAGYSRLMAATQRYLACERTGESCVVLVSGG--ATAPDNAAEANVYARELIALGVPAEHI 142
Query: 99 ----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
++NT NA +S ++++ V++VT H+ R+ + + + + S
Sbjct: 143 IREHASVNTWQNASNSSRMIQRDSVR-VVLVTSGLHLRRSLIYFRHFG----VVAEGLPS 197
Query: 155 HDLEENSSIF----KIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEIT 205
L + + ++ V+L EY+ +L + + S ++ T
Sbjct: 198 DRLRASPGWLPSAYNLLLIEVMLHEYIGVLRYHVYNGMGWNEESIKLDSVTPAAT 252
>gi|262275607|ref|ZP_06053416.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
gi|262219415|gb|EEY70731.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
Length = 271
Score = 52.2 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 29/195 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVVL------------T 44
+ L+ F+ F F + Q +P V ++VL T
Sbjct: 39 SFLVFVSLLLIFLTSFQPFTSSLLIKLERQYQPFLPTKEPVDYVMVLGHGHVVDDELPPT 98
Query: 45 GEPIRIE-----RAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIG 97
E R+ + K+ +SG VS +L ++ + + + I +
Sbjct: 99 SELSRVALMRLMEGIRIHFMYPTSKLILSGYDGGYEVSHARMLARVALAMGVNKNNILLL 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
A +T A +A++ +N +++VT HMPR E Q P ++
Sbjct: 159 ETAKDTWEEAFQAASVVGDSN---LVLVTSANHMPRAVYEFQNAGLNPIPAPTNFMAQKE 215
Query: 158 EENSSIFKIKILRVL 172
I + L
Sbjct: 216 IRQPWIKYGPRAQYL 230
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L K+ +SG S ++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIARKRIETETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N + ++ K N +IVT DYHM R + +R +P
Sbjct: 120 EENIKYSN---AKFNLGKTVIVTSDYHMYRGLMLAKRQGIDASGLP 162
>gi|257876412|ref|ZP_05656065.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810578|gb|EEV39398.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 371
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E A +LLE KI ++G ++ L+ + I + E I A +T
Sbjct: 216 NRLEHALKLLEKNPTAKIIVTGGVPKKENTEAKLMHQWLIENGIDEKRIIQEALATDTIE 275
Query: 106 NAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRI 141
NA + A + +F + + +++ H+ R + +
Sbjct: 276 NALFSIDLANELDFSNKITVISSASHVRRGKVLFETA 312
>gi|327386938|gb|AEA58412.1| hypothetical protein LCBD_2918 [Lactobacillus casei BD-II]
Length = 360
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ I++ + NT N
Sbjct: 207 RLEIALKAAKKYPKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVEN 266
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + ++T HM R FL Q V
Sbjct: 267 ALFSVRELVNREATSATLITSATHMRRAFLLYQMAGDIV 305
>gi|191639632|ref|YP_001988798.1| hypothetical protein LCABL_28900 [Lactobacillus casei BL23]
gi|190713934|emb|CAQ67940.1| Putative exported protein [Lactobacillus casei BL23]
gi|327383745|gb|AEA55221.1| hypothetical protein LC2W_2892 [Lactobacillus casei LC2W]
Length = 377
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ I++ + NT N
Sbjct: 224 RLEIALKAAKKYPKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVEN 283
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + ++T HM R FL Q V
Sbjct: 284 ALFSVRELVNREATSATLITSATHMRRAFLLYQMAGDIV 322
>gi|88861294|ref|ZP_01135925.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
gi|88816673|gb|EAR26497.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
Length = 250
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH-HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
R+ L + K+ +SG VS ++++ I I + KA +T A
Sbjct: 110 RLYEGLRLAKLYPSAKLVVSGGGFKGVSNSEIMRQAAIAIGFDPQRILLNPKARDTAEEA 169
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ N V +VT HM R + V I P ++ N +
Sbjct: 170 LLLAPKLVDNQ---VALVTSIAHMQRAVELFNQ--QGVDVIAAPTDWQEMPMNPLWRQ 222
>gi|329934704|ref|ZP_08284745.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329305526|gb|EGG49382.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 254
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 47/172 (27%), Gaps = 20/172 (11%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGE----------PIRIERAFELLE 58
+C++ F Q+ PD P VV R++ A L
Sbjct: 49 LCVLALSPAAWLFTTTGGQLRTPDTVPRTDVAVVFGAGLWDGEPSPYLAHRLDTAAGLYH 108
Query: 59 NQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ ++G + D ++ + + Y +T + A
Sbjct: 109 AGRVRVVLVTGDNSRDDYDEPDAMRAYLTEHGVPGDRVVEDYAGFDTWDSCVRARKIF-- 166
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
++++ +H+ R + Y + + + + +
Sbjct: 167 -GVDRAVLISQGFHIRRAVALCRAAG----VESYGVAATGDAHDVTWYYGAG 213
>gi|54298617|ref|YP_124986.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
gi|53752402|emb|CAH13834.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
Length = 250
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 27/159 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPD---HPSVSAIVVLTGEPI-------- 48
+ + + + L+ G++ ++ + +P+V +VVL G
Sbjct: 39 KVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKRVNPNVKWVVVLGGGQNIGEEMPAN 98
Query: 49 ---------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIG 97
R+ L K+ +SG + + L + + + I +
Sbjct: 99 DLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELAKWFAIDSEKIVVE 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++NT A E +A F +VT HMPR+
Sbjct: 159 TASINTADQALELAAIVHDQPF---YLVTSAIHMPRSMA 194
>gi|187776701|ref|ZP_02993174.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
gi|187775360|gb|EDU39162.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
Length = 324
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 17/153 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVV----LTGEP-------I 48
MR + + + + F I + +P + + I+V L G
Sbjct: 116 MRTLFSLVLILEFYITFTFSTLLIYSLIYTCLPKRLNCAYIIVHGCGLIGGERVSPLLKG 175
Query: 49 RIERAFELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+++A + + KI +SG +S+ ++ + E I + ++ T
Sbjct: 176 RVDKAVRIYHKCRQHPKIVVSGGKGDDEKISEAAAMKNYLVETGFPEEDIILEEQSKTTF 235
Query: 105 GNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
N + + N H + VT++YH+ RT L
Sbjct: 236 ENLKNVRDMLDVNGVKHRYIFVTNNYHVFRTSL 268
>gi|52842834|ref|YP_096633.1| hypothetical protein lpg2628 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629945|gb|AAU28686.1| membrane protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 250
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 27/159 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPD---HPSVSAIVVLTGEPI-------- 48
+ + + + L+ G++ ++ + +P+V +VVL G
Sbjct: 39 KVMLFVVLIVLLAMSTGWLPSYLTYQLESRYPIVKRVNPNVKWVVVLGGGQNIGEEMPAN 98
Query: 49 ---------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIG 97
R+ L K+ +SG + + L + + + + +
Sbjct: 99 DLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQSEALLLTELAKWFAIDSEKVVVE 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++NT A+E +A F +VT HMPR+
Sbjct: 159 TVSINTADQARELAAIVHDQPF---YLVTSAIHMPRSMA 194
>gi|322807132|emb|CBZ04706.1| hypothetical protein H04402_02902 [Clostridium botulinum H04402
065]
Length = 351
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-- 56
F+ FF+M FI I +++P I+VL RI++ E+
Sbjct: 136 FLITYFFMMMFIFAISAAINIYMPKRKKYDYIIVLGSGLIGDRVPPLLASRIDKGIEIYK 195
Query: 57 --LENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L+ KI + G +S+ + + K + + + I +A+NT N +
Sbjct: 196 RQLKKGNPSKIIFTGAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSK 255
Query: 112 AW------AEKNNFHHVLIVTHDYHMPRTFL 136
A + + +VT+++H+ R+ +
Sbjct: 256 KLLEEDYKAREKEYR-CTVVTNNFHLFRSLI 285
>gi|37525579|ref|NP_928923.1| hypothetical protein plu1635 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785007|emb|CAE13928.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 279
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 53/189 (28%), Gaps = 36/189 (19%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG-----VH 71
+P V IVVL G R+ L G K+ +G V
Sbjct: 82 NPPVDYIVVLGGGFTYNPNWAPSSNLLNNSLPRVTEGIRLYRLNPGSKMVFTGGKGANVK 141
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
S ++ + + K ++TE A E F ++VT HM
Sbjct: 142 SSAEVAAIVAQSLGVPAEDTIALT---KPMDTEQEANEVEKLIGNQPF---ILVTSANHM 195
Query: 132 PRTFLELQRINSTVQFIPYPIISHDL--EENSSIFKIKILRVLLIE----YLKILLLSIQ 185
R Q+ + IP P + + + L Y + L +
Sbjct: 196 QRAITFFQQ--HGLNPIPGPANQLAITSPLHPWEKYLPSAYYLSHSDRVWYETLGTLWQR 253
Query: 186 LSLSTQTAS 194
+ S
Sbjct: 254 IKPSKDPEQ 262
>gi|326774031|ref|ZP_08233313.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
gi|326636170|gb|EGE37074.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
Length = 227
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + E I +SG + D ++++ + Q + + I + Y +T
Sbjct: 70 AHRLDTAAELYTSGRVEAILVSGDNRRAGYDEPTVMRRYLLSQGIPDQAIAVDYAGFDTY 129
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A L+VT D+H PR
Sbjct: 130 DTCVRARRIF---GIERALLVTQDFHEPRAVA 158
>gi|217422760|ref|ZP_03454263.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|226200064|ref|ZP_03795613.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242312781|ref|ZP_04811798.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254186269|ref|ZP_04892787.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194017|ref|ZP_04900449.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254201133|ref|ZP_04907498.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254262741|ref|ZP_04953606.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254301320|ref|ZP_04968764.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254359227|ref|ZP_04975499.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|147748745|gb|EDK55820.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|148028414|gb|EDK86374.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157811319|gb|EDO88489.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157933955|gb|EDO89625.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|169650768|gb|EDS83461.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|217394991|gb|EEC35010.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|225927916|gb|EEH23954.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242136020|gb|EES22423.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254213743|gb|EET03128.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 298
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 39/233 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHP----SVSAIVVL---------TG- 45
R + G + +R ++ + +AIV+L TG
Sbjct: 69 RALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIAATGA 128
Query: 46 ------EPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLA 90
R+ A L + + KI +SG + V + + + + +
Sbjct: 129 VEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGID 188
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ +++NT NAQ + VL+VT H+ R+ L
Sbjct: 189 AADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFG----VAAI 244
Query: 151 PIISHDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ + L+ + I + L EYL I + +L A
Sbjct: 245 AVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLYNALGWNPARTRPGD 297
>gi|320107145|ref|YP_004182735.1| hypothetical protein AciPR4_1937 [Terriglobus saanensis SP1PR4]
gi|319925666|gb|ADV82741.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 204
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 15/146 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGEP-----IRIERAFEL 56
+ +CLI+ ++ F + Q V AI+VL G P R+
Sbjct: 12 VVLCLIYPVVLFGLYFGASHQNVKLG--KVDAIIVLGCPTKPDGSPTPEQRERVLEGVRE 69
Query: 57 LENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + I ++G H+ + + + + + +A NT N +
Sbjct: 70 FRKGVSDHIIMTGAAAHNQFVEAHSMALLAEANGVPASAVIEEDQAQNTVQNIYYSEKIM 129
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQR 140
EK+ +H +++ H+PRT L L
Sbjct: 130 EKSGWHTTEVISSPSHLPRTALILHH 155
>gi|315151722|gb|EFT95738.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 193
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|302524814|ref|ZP_07277156.1| predicted protein [Streptomyces sp. AA4]
gi|302433709|gb|EFL05525.1| predicted protein [Streptomyces sp. AA4]
Length = 329
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 68/175 (38%), Gaps = 28/175 (16%)
Query: 29 MHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISG---VHHSVS 75
+ +A+VVL R++RA ++ + G + +SG S
Sbjct: 150 SRVTRRLRAAAVVVLGSGLQGDRVPPLLASRLDRAVQVQQRSPGAVLVVSGGQGADELTS 209
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI-VTHDYHMPRT 134
+ + + + + E + + +A T N + + A + F ++ VT++YH+ RT
Sbjct: 210 EAAAMARYLVEAGVPEEQLVLEDRATTTSENLRFSVALLAERGFSGPILAVTNNYHVFRT 269
Query: 135 FLELQRINSTVQFIP-----YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ +++ + I Y + S L E + LL+EY K +
Sbjct: 270 AVLARQLGLRLNVIGARTASYFVPSAFLREFVA---------LLVEYRKTNAAVL 315
>gi|257084233|ref|ZP_05578594.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992263|gb|EEU79565.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 193
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSEKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|225869237|ref|YP_002745185.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
gi|225702513|emb|CAX00445.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
Length = 327
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 15/114 (13%)
Query: 33 DHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
I+VL RI + ++ G K+ +SG +++
Sbjct: 149 RKTKEDYIIVLGSGLNGDQVTPLLASRINKGIQVYRKNPGSKLIMSGGKGADELIAEGEA 208
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ + ++Q + I + ++ NT N + +VT+ YH+ R
Sbjct: 209 MCRYAVQQGIKSEDILVENQSRNTRENILFSKQLIPAGA--SFCLVTNRYHLFR 260
>gi|307289790|ref|ZP_07569727.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
gi|306499175|gb|EFM68653.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
Length = 193
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|262370433|ref|ZP_06063759.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314775|gb|EEY95816.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 370
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 29/176 (16%)
Query: 30 HIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVHHS 73
+AIVVL G +R+E ++ + + SGV +
Sbjct: 197 RKAALNMPNAIVVLGGGLTLDKNRKDIVVNEYTRLRLETTLQVEQQFKLPIVL-SGVE-A 254
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDYHMP 132
L+ + L + +++NT N++ +S +K V+++T YHMP
Sbjct: 255 PYMQRWLKARGVDAKL------LEDRSMNTCENSRFSSLLLQKKGGAPRVILITDQYHMP 308
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
RT Q I P+ + + S R E +L +I+ L
Sbjct: 309 RTRRLFALNGIETQPIEAPMPTQLTQWRPSEQNYDHSRRANYE----MLATIRDVL 360
>gi|194335748|ref|YP_002017542.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308225|gb|ACF42925.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 29/141 (20%)
Query: 28 QMHIPDHPSVSAIVVLTG--------------EP-IRIERAFELLENQIGEKIFIS---- 68
++ + AIVVL+G R + EL + + +
Sbjct: 61 RVPVSSVGKADAIVVLSGMIVTVDGAPLGEWGGAVDRFDGGVELFKAGRAPVVVFTRGQV 120
Query: 69 ----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW--AEKNNF-HH 121
GV LL K + + + I + KA NT A AS A K
Sbjct: 121 PWQPGVVPE---GELLAKRALLLGVPQSAIRLTGKAGNTADEAAAASVLLGASKKGVPRR 177
Query: 122 VLIVTHDYHMPRTFLELQRIN 142
+++VT +HM R +R
Sbjct: 178 IILVTSAFHMRRARFLFERAG 198
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 47 PIRIERAFELLENQIGEKIFISG-VHH-SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++RA + +N + +IF+SG + + ++ +++ + + I + L+T
Sbjct: 53 SARLDRARQCYDNGLCHQIFVSGGIDKQGTDEARAMEDYLVKRGIPKERIVMDNMGLDTW 112
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ ASA+ + ++ L+VT +H+PR L L+R YP + S+I
Sbjct: 113 DTVRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFGINHVAGSYPQFFEIRDIYSAIR 172
Query: 165 KIKIL 169
+ +
Sbjct: 173 ETPAI 177
>gi|229523809|ref|ZP_04413214.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
gi|229337390|gb|EEO02407.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
Length = 282
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +
Sbjct: 117 RLTEGIRISRMYPGSKLILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDAWEE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HM R E + + IP P
Sbjct: 177 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFESA--GLTPIPAP 216
>gi|170703279|ref|ZP_02894076.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170131818|gb|EDT00349.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 219
Score = 51.8 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 53/159 (33%), Gaps = 14/159 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ +SG +++ ++ + + I + + NT
Sbjct: 64 AARLDVGVRCYREGQCPAFLVSGAIDGPGLNEATAMRDYLVAHGVPADRIAVDDQGDNTL 123
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQF-IPYPIISHDLEENSS 162
AQ A+ + VLI++ YH+ R L +R+ + YP + SS
Sbjct: 124 ATAQHTRAYLLAHRMSRVLIISQYYHLARARLAFERVGIAGANISAAYPHHFQLRDIYSS 183
Query: 163 IFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
++ + ++L L+ F ++
Sbjct: 184 WREVPA----------YAVYVLRLWLNPDARPVSFRPML 212
>gi|256763425|ref|ZP_05504005.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257417033|ref|ZP_05594027.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|256684676|gb|EEU24371.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257158861|gb|EEU88821.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|295113736|emb|CBL32373.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
gi|315145741|gb|EFT89757.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 193
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKKHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|302838718|ref|XP_002950917.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
gi|300264034|gb|EFJ48232.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
Length = 242
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 33/139 (23%)
Query: 30 HIPDHPSVSAIVVLTGEP-----------IRIERAFEL--LENQIGEKI----------- 65
+ + S+ AI+VL G R++ A L L+ + +
Sbjct: 72 PLEPYRSLDAIIVLAGGQTGPDSIPKWVERRLDTALSLQSLQQKACPILSLGGGTPHKAP 131
Query: 66 -FISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW-AEKNNFH 120
SG +H + + L + DL + + +T GNA + A +
Sbjct: 132 YLDSGGFVIHEATACSRYLTRRGADADLLLKEV----SSYDTVGNAYFSLTIHAVPAGWR 187
Query: 121 HVLIVTHDYHMPRTFLELQ 139
V +VT D+HMPRT
Sbjct: 188 RVGVVTSDFHMPRTAALFN 206
>gi|296876546|ref|ZP_06900597.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
gi|296432539|gb|EFH18335.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 32 PDHPSVSAIVVLTGE----------PIRIERAFELLEN-QIGEKIFISGV---HHSVSKD 77
P AI++L R+E+ + E + K+ +SG +++
Sbjct: 155 PVGKEPDAIIILGSGLIGDKVPPLLAQRLEKGKAIYEQFERRPKLIVSGGQGSDELIAEA 214
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
+ I + E I I ++ T N + E+ VL+VT+ +H R +
Sbjct: 215 EAMAGYLIEHGVPEDAILIENRSRTTFENLTFSKRILEEEGLGKRVLLVTNSFHALRAGV 274
Query: 137 ELQRI 141
++R+
Sbjct: 275 FMRRL 279
>gi|312866618|ref|ZP_07726833.1| putative membrane protein [Streptococcus parasanguinis F0405]
gi|311097917|gb|EFQ56146.1| putative membrane protein [Streptococcus parasanguinis F0405]
Length = 342
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 32 PDHPSVSAIVVLTGE----------PIRIERAFELLEN-QIGEKIFISGV---HHSVSKD 77
P AI++L R+E+ + E + K+ +SG +++
Sbjct: 155 PVRKEPDAIIILGSGLIGDKVPPLLAQRLEKGKAIYEQFERRPKLIVSGGQGSDELIAEA 214
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
+ I + E I I ++ T N + E+ VL+VT+ +H R +
Sbjct: 215 EAMAGYLIEHGVPEDAILIENRSRTTFENLTFSKRILEEEGLGKRVLVVTNSFHALRAGV 274
Query: 137 ELQRI 141
++R+
Sbjct: 275 FMRRL 279
>gi|262279426|ref|ZP_06057211.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259777|gb|EEY78510.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 373
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 37/189 (19%)
Query: 23 IRYVKQMHIPDHPS----VSAIVVLTGE----------------PIRIERAFELLENQIG 62
I YV++ IP AIVVL G +R+E+ E+ +
Sbjct: 189 IEYVRKNPIPVQSKKLSEPYAIVVLGGGLTLDKNGKDIVVNGYTRLRLEKTLEIEKQSHL 248
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHH 121
+ SGV + L++ + L + +++NT N + +S +K
Sbjct: 249 PIVL-SGVE-APYMQTWLKERGVEAKL------LEKRSMNTCENTRFSSLLLQKKGGAPT 300
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT + ++ IP P+ + S+ R E
Sbjct: 301 VMLVTDEYHMPRTRRLF--ALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYE---- 354
Query: 180 LLLSIQLSL 188
LL +I+ L
Sbjct: 355 LLATIRDML 363
>gi|241661663|ref|YP_002980023.1| hypothetical protein Rpic12D_0039 [Ralstonia pickettii 12D]
gi|240863690|gb|ACS61351.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 251
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 25/146 (17%)
Query: 38 SAIVVLTGEPIRIERAFE--------------LLENQIGE----KIFISGV---HHSVSK 76
+AIV+L R+ + E L + KI +SG HH +
Sbjct: 68 NAIVLLGAGTFRVGDSVEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPE 127
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Q+ +R +A+ + I +++NT NAQ + + ++V+ H+ R+ L
Sbjct: 128 ATVYQRELVRLGVAKDDVLIEPQSMNTWQNAQFSRTVLAQYAPDRTVLVSSAIHLRRSLL 187
Query: 137 ELQRINSTVQFIPYPIISHDLEENSS 162
P P+ + DL+ +S
Sbjct: 188 YFTHFG----MAPIPVRADDLQAAAS 209
>gi|29377330|ref|NP_816484.1| hypothetical protein EF2862 [Enterococcus faecalis V583]
gi|227554286|ref|ZP_03984333.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229549029|ref|ZP_04437754.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255974796|ref|ZP_05425382.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256960950|ref|ZP_05565121.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256963911|ref|ZP_05568082.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257079971|ref|ZP_05574332.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257081584|ref|ZP_05575945.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257087767|ref|ZP_05582128.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257091087|ref|ZP_05585448.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|293382461|ref|ZP_06628396.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293387155|ref|ZP_06631716.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294779524|ref|ZP_06744919.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|307268328|ref|ZP_07549709.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|307272101|ref|ZP_07553364.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|307280587|ref|ZP_07561635.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|307286850|ref|ZP_07566932.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|312901401|ref|ZP_07760678.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312904386|ref|ZP_07763547.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|312906516|ref|ZP_07765518.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910460|ref|ZP_07769306.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|29344797|gb|AAO82554.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176576|gb|EEI57548.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229305822|gb|EEN71818.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255967668|gb|EET98290.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256951446|gb|EEU68078.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256954407|gb|EEU71039.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256988001|gb|EEU75303.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256989614|gb|EEU76916.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256995797|gb|EEU83099.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256999899|gb|EEU86419.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|291080145|gb|EFE17509.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291083426|gb|EFE20389.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294453403|gb|EFG21810.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|306502065|gb|EFM71351.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|306503953|gb|EFM73170.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|306511217|gb|EFM80224.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|306515354|gb|EFM83888.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|310627459|gb|EFQ10742.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310632285|gb|EFQ15568.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|311289232|gb|EFQ67788.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311291477|gb|EFQ70033.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315026569|gb|EFT38501.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315148855|gb|EFT92871.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315162808|gb|EFU06825.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315166292|gb|EFU10309.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315169149|gb|EFU13166.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315171876|gb|EFU15893.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575243|gb|EFU87434.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315576853|gb|EFU89044.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|315582397|gb|EFU94588.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327536019|gb|AEA94853.1| hypothetical protein OG1RF_12166 [Enterococcus faecalis OG1RF]
gi|329577167|gb|EGG58637.1| hypothetical protein HMPREF9520_00991 [Enterococcus faecalis
TX1467]
Length = 193
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|294650259|ref|ZP_06727628.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823851|gb|EFF82685.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 373
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 33/181 (18%)
Query: 27 KQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGV 70
+ + D AIVVL G +R+ER E+ E Q I +SGV
Sbjct: 197 DRGDLKDTNQPYAIVVLGGGLTLGANGKDIVVNNYTRLRLERTLEV-EKQYNLPIVLSGV 255
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDY 129
+Q + + + +++NT N + +S +K V+++T +Y
Sbjct: 256 E-----APYMQAWLEERGIKAK--LLENRSMNTCENTRFSSLLLQKKGGAPKVILITDEY 308
Query: 130 HMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
HMPRT + ++ +P P+ + S R E LL +I+
Sbjct: 309 HMPRTRRLF--ALNGIETVPVVAPMPTKLTSWRPSEKNYDHSRRANYE----LLATIRDV 362
Query: 188 L 188
L
Sbjct: 363 L 363
>gi|257421586|ref|ZP_05598576.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257163410|gb|EEU93370.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|315156481|gb|EFU00498.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 193
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|315173909|gb|EFU17926.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 193
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|256616694|ref|ZP_05473540.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256596221|gb|EEU15397.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|315033112|gb|EFT45044.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
Length = 193
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKKHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|227893937|ref|ZP_04011742.1| membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864241|gb|EEJ71662.1| membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 350
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 15/112 (13%)
Query: 38 SAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIP 84
+VVL RI R E+ G K+ +SG + + + +
Sbjct: 182 DYVVVLGAGIMGKTVTPLLASRISRGIEIYHKNPGSKLIMSGGQGPGEDIPEAEAMAEYA 241
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + I I K+ T N + + A + + IVT YH+ R +
Sbjct: 242 MNAGVPKADIIIENKSRTTNENLRFSHALMKPD--SKFCIVTSSYHVYRALV 291
>gi|195977434|ref|YP_002122678.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974139|gb|ACG61665.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 342
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 15/114 (13%)
Query: 33 DHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
I+VL RI + ++ G K+ +SG +++
Sbjct: 164 RKTKEDYIIVLGSGLNGDQVTPLLASRINKGIQVYRKNPGSKLIMSGGKGADELIAEGEA 223
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ + ++Q + I + ++ NT N + +VT+ YH+ R
Sbjct: 224 MCRYAVQQGIKSEDILVENQSRNTRENILFSKQLIPAGA--SFCLVTNRYHLFR 275
>gi|42519211|ref|NP_965141.1| hypothetical protein LJ1286 [Lactobacillus johnsonii NCC 533]
gi|41583499|gb|AAS09107.1| hypothetical protein LJ_1286 [Lactobacillus johnsonii NCC 533]
Length = 346
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 77/200 (38%), Gaps = 27/200 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + L + + FIM + ++ ++I + +VVL RI R
Sbjct: 141 YLFINLVIIYLIFIMMMYTLTSWINLVNI-KTKKLDYVVVLGAGLMGKKVTPLLAARINR 199
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+ G KI +SG + + + + K + + + I + K+ T N
Sbjct: 200 GIEVYRRNPGSKIIMSGGQGPGEEIPEAVAMAKYAEEKGVPKQDIIVEDKSKTTRENLIF 259
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+ + + IVT+ YH+ R + +R+ +Q I Y + F +
Sbjct: 260 SHKLMKPD--SRFAIVTNSYHVYRALVLAKRL--GLQCIGYGAKTK------WYFTLNAF 309
Query: 170 RVLLIEYLKILLLSIQLSLS 189
+ E++ L ++ +L LS
Sbjct: 310 ---VREFIAYLTITWRLQLS 326
>gi|182416277|ref|YP_001821343.1| hypothetical protein Oter_4472 [Opitutus terrae PB90-1]
gi|177843491|gb|ACB77743.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 263
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 31/212 (14%)
Query: 4 FWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHPSVSA---IVVLTGEPI---------- 48
G I GF+ R +++ P ++VL G+
Sbjct: 46 LATGCVAVFILVGNGFLARWLARSLQEPAFFRKPQDFGGVSVIVLLGDGNIVQPNSGEAL 105
Query: 49 -------RIERAFELL----ENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCI 94
RIERA EL + ++ ++G K+ + + + I
Sbjct: 106 PGWLAYSRIERAGELYRSATASGAACRVIVTGDDSSDPGAVKEPVYVQRLRALGVPAGDI 165
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K NT A+ S + + +VT HM R + + ++
Sbjct: 166 RVEGKGRNTYRQAELTSEILKAERCDRIFMVTSGLHMKRALRYFLNFGVSAIPVASDYVT 225
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++ I + L +Y L +++
Sbjct: 226 GNITLLPLGSNFAIADIALHQYAG--LARLRI 255
>gi|315647696|ref|ZP_07900797.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
gi|315276342|gb|EFU39685.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
Length = 202
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 12/155 (7%)
Query: 37 VSAIVVLTGEPI--RIERAFELLENQIGEKIFISGVHH----SVSKDILLQKIPIRQDLA 90
I V G R+ +A EL + I +G + +++ ++ +
Sbjct: 34 ADIIFVF-GGKNLDRVWKAVELYNDGRAPYILFAGGDRFGEWDQPEATMMRDEAVKMGVP 92
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQRINST-V 145
I I + +T+ N + ++ +L V+ HM R L L+
Sbjct: 93 PESIFIETMSNHTKENVIASLIVLDRALGLQQIQRLLFVSAPSHMRRCQLLLKTFMPPWY 152
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+F+ P ++ + ++ + E K++
Sbjct: 153 EFVWSPDHRAKGRRDNWWTEPVEVKRAMGELHKVI 187
>gi|256843931|ref|ZP_05549418.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256849507|ref|ZP_05554939.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|293381368|ref|ZP_06627369.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|312983993|ref|ZP_07791342.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613836|gb|EEU19038.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713623|gb|EEU28612.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|290922058|gb|EFD99059.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|310894670|gb|EFQ43743.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 343
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 15/115 (13%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV-HHSVSKDILLQKI 83
P + IVVL RI R E+ G K+ +SG +
Sbjct: 172 PHLDYIVVLGAGIMGTKVTPLLAARISRGIEIYHKNPGSKLIMSGGQGPGEDIPEAVAMA 231
Query: 84 PIRQDLA--ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L + I I K+ T+ N Q + A + N IVT YH+ R +
Sbjct: 232 EYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVYRALV 284
>gi|300692848|ref|YP_003753843.1| lipoprotein transmembrane [Ralstonia solanacearum PSI07]
gi|299079908|emb|CBM10289.1| putative lipoprotein transmembrane [Ralstonia solanacearum PSI07]
Length = 251
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 35/192 (18%)
Query: 2 RYFWYGLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIE 51
R GL V + + + ++ +AIV+L R++
Sbjct: 22 RRTARGLAVVSLALFIAIGCGPVPAWLLDSLEGPFEARPAVAWGKRNAIVLLGAGTRRVD 81
Query: 52 RAF--------ELLEN----------QIGEKIFISGV---HHSVSKDILLQKIPIRQDLA 90
L+E KI +SG HH + + Q+ +
Sbjct: 82 GGVEPGVFSYPRLMEAAQQYQACRKTGADCKILVSGGDARHHGDPEATVYQRALQAIGIG 141
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ + ++NT NAQ + A ++V+ H+ R+ L +P
Sbjct: 142 TDDVLLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFG----MMPT 197
Query: 151 PIISHDLEENSS 162
P+ + DL+ S
Sbjct: 198 PMRADDLQATPS 209
>gi|260589645|ref|ZP_05855558.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260539885|gb|EEX20454.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 200
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 21/149 (14%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKD-------------------ILLQKIPIRQDLAE 91
E A +L + I SG + ++ L+++ + ++E
Sbjct: 37 EEAAKLYHQGLVPYILPSGRYSVLNGKFAGVQEKKELYDGEYETEWEFLKEVLKKNHVSE 96
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I KA T NA + + ++ YH R+ L Q + QF
Sbjct: 97 EHILREDKATYTYENAIYSRKVTDCLGMEIKKAILCCKPYHARRSLLYYQLLYPETQFFV 156
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK 178
PI D++ + K +R++ E K
Sbjct: 157 RPIQDSDVKRENWYLTEKGIRLVFGEVQK 185
>gi|295693788|ref|YP_003602398.1| hypothetical protein LCRIS_01926 [Lactobacillus crispatus ST1]
gi|295031894|emb|CBL51373.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 343
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
P + IVVL RI R E+ G K+ +SG + + + +
Sbjct: 172 PHLDYIVVLGAGIMGTKVTPLLAARISRGIEIYHKNPGSKLIMSGGQGHGDDIPEAVAMA 231
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + + I I K+ T+ N Q + A + N IVT YH+ R +
Sbjct: 232 EYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVYRALV 284
>gi|257064629|ref|YP_003144301.1| hypothetical protein Shel_19360 [Slackia heliotrinireducens DSM
20476]
gi|256792282|gb|ACV22952.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 246
Score = 51.8 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIR-YVKQMHIPDHPSVSAIVVL-----TGEPI-----RI 50
R+ + + I GF+ + P + IVVL P R+
Sbjct: 56 RFAHISIAGLSVVLIAGFLVAAGCSLSGFDEHGEPDLDCIVVLGAQMKADGPSIVLRLRL 115
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A++ L +SG + +++ + I + + E I + NT N
Sbjct: 116 DAAYDYLVENPETVCIVSGGQGPNEPITEADGMADYLIERGIDESRIIRENTSTNTVENI 175
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ +SA+ + + V IVT+++H+ R+
Sbjct: 176 RNSSAFFDAEH-DRVGIVTNNFHVFRSV 202
>gi|293391137|ref|ZP_06635471.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951671|gb|EFE01790.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ + I ++G ++ L+++ I + + I A +T
Sbjct: 213 QRLEKTLEIAKQNPDALIIVTGGVPQNNRTEGALMKQWLINKGIDAKRIYADNYARSTVE 272
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMP--RTFLELQRI 141
NA + K++ H +++ H+ R E+ +
Sbjct: 273 NALFSRYALAKHHIKHAALISSGSHVRRGRALFEIAAL 310
>gi|329667272|gb|AEB93220.1| hypothetical protein LJP_0894 [Lactobacillus johnsonii DPC 6026]
Length = 346
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 27/200 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + L + + FIM + ++ ++I + +VVL RI R
Sbjct: 141 YLFINLVIIYLIFIMMMYTLTSWINLVNI-KTKKLDYVVVLGAGLMGKKVTPLLAARINR 199
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+ G KI +SG + + + + K + +++ I + K+ T N
Sbjct: 200 GIEVYRRNPGSKIIMSGGQGPGEEIPEAVAMAKYAEEKGISKQDIIVEDKSKTTRENLIF 259
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+ + + IVT+ YH+ R + +R+ +Q I Y + F +
Sbjct: 260 SHRLMKPD--SRFAIVTNSYHVYRALVLAKRL--GLQCIGYGAKTK------WYFTLNAF 309
Query: 170 RVLLIEYLKILLLSIQLSLS 189
+ E++ L ++ +L LS
Sbjct: 310 ---VREFIAYLTITWRLQLS 326
>gi|294651352|ref|ZP_06728671.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822754|gb|EFF81638.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 284
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVLTGE----------PIRIER 52
W ++C +++ F Y+ + SV+AI+VL R++R
Sbjct: 92 WRFGWLCFWVWLISLGYFFNYLNKNNSQVEVPTSVAAIIVLGSGIENGQPSATLAKRLDR 151
Query: 53 AFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A + L + + GV ++ + + + + + I + K+ +TE N +
Sbjct: 152 AAPIALTQPNAKLLLTGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLK 211
Query: 109 EASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
+ + + + IVT D+H R
Sbjct: 212 NSQPLLQAHKISLQQPIAIVTSDFHTLRAAA 242
>gi|320533701|ref|ZP_08034320.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320134096|gb|EFW26425.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 265
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A +L + E I +SG + D ++++ + Q + + + + Y +T
Sbjct: 108 AHRLDVAADLYTSGRVEAILVSGDNRRAGYDEPTVMRRYLLSQGIPDQAVAVDYAGFDTY 167
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A L+VT D+H PR
Sbjct: 168 DTCVRAR---RVFGIERALLVTQDFHEPRAVA 196
>gi|291533114|emb|CBL06227.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 255
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 33/188 (17%)
Query: 28 QMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGV 70
+ I++L G R+ L + I SG
Sbjct: 71 TIEQLKQDKNDVIIMLGGGAINVADIDGEGQVSGYVANRMITVMRLQKELDIPIIL-SGG 129
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ + + ++I + + + ++ NT N Q + E+ NF L++T
Sbjct: 130 KVFEDTGREADIEKRIFEGMGVNSQALILENQSRNTVENVQNSKVIMEEYNFTKPLVITS 189
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF---------KIKILRVLLIEYLK 178
+H+ R R ++ PY + + + + + + + EYL
Sbjct: 190 GFHLLRAMEIFAR--EEIEATPY-VADYQMSDELVFSIFNFLPNNGSLNTSCMAIREYLG 246
Query: 179 ILLLSIQL 186
IL L +++
Sbjct: 247 ILALKLKM 254
>gi|329963034|ref|ZP_08300814.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
gi|328529075|gb|EGF56005.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
Length = 194
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 36 SVSAIVVLTG-EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIP--IRQDLA 90
S I++L G R ++A EL + I KI SG + +P +++ +
Sbjct: 19 SSDVIILLEGDGLNRYQKAVELYDQGIAAKIVFSGNITDYEYGSFPFSDVLPYILKEGVP 78
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL--QRINSTVQFI 148
I K+LNT A E A +N + +++V H R +L + ++ I
Sbjct: 79 ADAIVHEDKSLNTREQAVEVVKMAMENGWKRLVLVASHEHQYRAYLTFLRETLDKKSSII 138
Query: 149 PY--PIISHDLEENSSI 163
Y P+ + + S
Sbjct: 139 LYNAPVRNLGWFKESEW 155
>gi|317491475|ref|ZP_07949911.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316921022|gb|EFV42345.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 256
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 53/188 (28%), Gaps = 28/188 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W G+ + + I + I + IVVL G
Sbjct: 45 LAWLGILLLSLQPIADRLLAPLENHYPTINTPSNADYIVVLGGGYTFNPDWAPSSNLINN 104
Query: 49 ---RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ LE KI +G + S + AE I + K
Sbjct: 105 SLPRVTEGVRQLELNPNAKIIFTGAAAISNPISSAQVAANVAKSLGVPAERIIILD-KPR 163
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP---YPIISHDLE 158
+T+ AQE + +K +L+VT H+PR + P I S
Sbjct: 164 DTQQEAQEVAKIVQKQ---RLLLVTSANHLPRALRFFKAEALDPIPAPANQLAISSPLNP 220
Query: 159 ENSSIFKI 166
+
Sbjct: 221 WERWLPSP 228
>gi|299066425|emb|CBJ37610.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 265
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 33/176 (18%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
W ++ ++ R + P P VVL G ++
Sbjct: 44 WVLGIALIVAWVAATPWCGRLLASWTHPAPPLRLDALQPQGEGAVVLLGGARKLAAREYA 103
Query: 53 --AFELLENQIGEK--------------IFISGVHHS---VSKDILLQKIPIRQDLAECC 93
L E+ + +G V + L++++
Sbjct: 104 GQGATALSGPSLERTVYAARLARAAHLPVLATGGAPEGNGVPEAELMRRLVADMGQDARW 163
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I ++ TE NA ++ + +VTH +HM R + TV P
Sbjct: 164 I--ETRSATTEENAAFSAPMLRAAGIRRIYLVTHYWHMARARRYFEGQGFTVTPAP 217
>gi|225869812|ref|YP_002745759.1| membrane protein [Streptococcus equi subsp. equi 4047]
gi|225699216|emb|CAW92492.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
Length = 327
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 33 DHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
I+VL RI + ++ + G K+ +SG +++
Sbjct: 149 RKTKEDYIIVLGSGLNGDQVTPLLASRINKGIQIYQKNPGSKLIMSGGKGADELIAEGEA 208
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ + I+Q + I + ++ NT N + +VT+ YH+ R
Sbjct: 209 MCRYAIQQGIKSEDILVENQSRNTRENILLSKQLIPSGA--SFCLVTNRYHLFR 260
>gi|310829787|ref|YP_003962144.1| integral membrane protein [Eubacterium limosum KIST612]
gi|308741521|gb|ADO39181.1| integral membrane protein [Eubacterium limosum KIST612]
Length = 403
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 24/149 (16%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELL 57
+ + + ++ ++ P I+VL RI+RA ++
Sbjct: 186 ILLYLLLVFSNFILSSFIYGIYRPVLRQ-DYIIVLGSGLMGGNKVTPLLAGRIDRALKVY 244
Query: 58 ENQIGEK----IFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
Q +K + I G +++ +++ + Q + E I + ++ NT N
Sbjct: 245 RRQADKKKSPPMLIMSGGQGGDEQIAEGEAMKQYALEQGIPEDHILVEDQSKNTYENMLF 304
Query: 110 ASAWAEKN--NFHHVLIV--THDYHMPRT 134
+ E + H+ I+ T +YH+ R
Sbjct: 305 SRQLIESREADMKHLRILFSTSNYHVFRA 333
>gi|255971798|ref|ZP_05422384.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|312951115|ref|ZP_07770020.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|255962816|gb|EET95292.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|310630891|gb|EFQ14174.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|315154145|gb|EFT98161.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158992|gb|EFU03009.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|323481728|gb|ADX81167.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 193
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG + ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLLY---FKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|227519414|ref|ZP_03949463.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
gi|227073121|gb|EEI11084.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
Length = 193
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L R
Sbjct: 123 KENIVNSQKLL---SFKRLVIVTSDFHMYRSQLLANRAG 158
>gi|218709695|ref|YP_002417316.1| hypothetical protein VS_1706 [Vibrio splendidus LGP32]
gi|218322714|emb|CAV18890.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 253
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 64 KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
K+ +SG ++ V++ + Q+ +R + I ++NT NAQ S + + F
Sbjct: 114 KVIVSGGDAQNNGVTEAEVYQQQLLRLGVPRADIIQEPNSVNTWKNAQLTSDLMKHHQFD 173
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++++V+ H+ R+ L V + ++ + + + L E
Sbjct: 174 NIVLVSSGLHIRRSELYFNHFGLNVIPLRADYMAAQISWLPLWYNFAVTDFALHE 228
>gi|15805246|ref|NP_293934.1| hypothetical protein DR_0210 [Deinococcus radiodurans R1]
gi|6457880|gb|AAF09796.1|AE001883_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 278
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 33 DHPSVSAIVVLTGEPI------------RIERAFELLENQIGEKIFIS------GVHH-- 72
AIVVL G R+ L + I +S G H+
Sbjct: 102 PPVKADAIVVLGGGVNCGAAQLESSSVARLLGGLRLWQAGYAPVITVSEQSGLIGPHNCP 161
Query: 73 --SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
SV + L++++ + + + T AQ S A + + VL+VT H
Sbjct: 162 KMSVLERELVRELYGAGGPE--VLTLPH-VTTTRDEAQRVSVLARERGWRRVLLVTSPSH 218
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
R V +P +D + ++ LR LL E
Sbjct: 219 SRRAAALFAGYGVPVVSVPTFESRYDQSLQTPSDRLFALRTLLYE 263
>gi|322419180|ref|YP_004198403.1| hypothetical protein GM18_1662 [Geobacter sp. M18]
gi|320125567|gb|ADW13127.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 200
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 74/206 (35%), Gaps = 34/206 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-----DHPSVSAIVVLTGEP---IRIER 52
MR + F++ SF R + P A VL G R+
Sbjct: 1 MRLRILAAVLAGFLFLVVLPSFPRVRAILAAPLTVTDSKAQGDACYVLAGGETVWERLNA 60
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID--------IGY-----K 99
A +L+ +I++ + S+D + + + +D K
Sbjct: 61 AADLVHLGRVPRIYLM---NDTSRDQYSIRAGESRTRIQWYVDYLVWRGVPADRISFIPK 117
Query: 100 ALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHD 156
G EA A+A + V+IV+ HM R L QRI V+ +PY + D
Sbjct: 118 TKGLLGTRSEARAFAAQLPKGARQVVIVSSAPHMRRALLTFQRILPAQVRVVPYA--ATD 175
Query: 157 LEENSSIFKIKILRVLLIEYLKILLL 182
L + ++ L +EYLK+L+
Sbjct: 176 LAGSQELYHP-----LWVEYLKLLVY 196
>gi|145588430|ref|YP_001155027.1| hypothetical protein Pnuc_0242 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046836|gb|ABP33463.1| protein of unknown function DUF218 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 272
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 24/165 (14%)
Query: 41 VVLTGEPIRIERAFELLEN---------QIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
V L R+ +A EL+ ++ G+ + + L+ + + Q+ E
Sbjct: 107 VPLQSSAERVTKALELIRKYPNLPFIFSGYSGRLNPKGLSEADAFKQLIAEQGLSQET-E 165
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHH-------VLIVTHDYHMPRTFLELQRINST 144
++ NT N + L++T HM R Q
Sbjct: 166 KTAHYENQSRNTYENVLYLRPMMQDFGARSESGAIQPWLLITSASHMYRAEKIFQ--MQG 223
Query: 145 VQFIPYPIISHDLEENSSIF-----KIKILRVLLIEYLKILLLSI 184
++ IP P+ + + L+ E + +L I
Sbjct: 224 IEVIPVPVDYQTANSLNWTSFDLEDGTQNWHKLVHEVVGLLAYWI 268
>gi|315659320|ref|ZP_07912184.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|315495745|gb|EFU84076.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
Length = 317
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIER 52
+ + I + F ++ + + +H + I+VL R+ R
Sbjct: 113 LFIWFSLIAISTLTTFALYLCFSSAFGRMTNHCTFDGIIVLGAGIFTEAVTPLLASRLNR 172
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A + Q I +SG +S+ + +++ + + E I + + NT N
Sbjct: 173 ALSIYNQQSHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQSIIMEAHSTNTAENFLY 232
Query: 110 ASAWAEKNNFH--HVLIVTHDYHMPRTF 135
+ + + +L+VT +H+ R
Sbjct: 233 SKSIIDAMTPKPNKLLVVTSQFHILRAL 260
>gi|168998459|ref|YP_001687731.1| hypothetical protein pSA11_00005 [Streptomyces cyaneus]
Length = 221
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 58/158 (36%), Gaps = 17/158 (10%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNT 103
+ A +L + + + +G +++ + ++ + + + + +A NT
Sbjct: 41 DTAVDLYKRGMVPLLLFTGATSPTTRERMPRGEAVHYRERAVELGVPSSDVLVEPRARNT 100
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + E+ VL+++ Y R + +++ V+ + S + +
Sbjct: 101 GENIRFSRELLEEAGVEVSSVLLISKPYEERRAYATARKLWPGVEVVS---ASSPMTLDE 157
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ I R+++ +L+ L F I+
Sbjct: 158 YVDSIGDARLVID-----MLVGALQRLMVYPEQGFMIS 190
>gi|167566356|ref|ZP_02359272.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 255
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 17/163 (10%)
Query: 44 TGEPIRIERAFELL------ENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
T R+ A L G KI +SG + V + + + I + +
Sbjct: 90 TFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYRDALIGLGIDAADV 149
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+++NT NAQ VL+VT H+ R+ L P+ +
Sbjct: 150 LSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSMLYFAHFG----VAAIPVRA 205
Query: 155 HDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
L+ + + L EYL I + +L A
Sbjct: 206 EYLQAMLFPLPLAYNFSAADLALHEYLGIARYRLYDALGWNPA 248
>gi|254555567|ref|YP_003061984.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254044494|gb|ACT61287.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 340
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 78/218 (35%), Gaps = 35/218 (16%)
Query: 2 RYFWYGLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------P 47
R W L + L+ F F +++ + H + ++VL
Sbjct: 124 RRLWQFLGLALLLTAYFAFSFFAYLLACVTTRLGRHRQIDYMIVLGAGLMPNGQPTRTLA 183
Query: 48 IRIERAFELLENQIGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R++ A + Q I +SG +++ +++ + Q + I +
Sbjct: 184 YRLQAAAKYYRAQRARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQEENQ 243
Query: 100 ALNTEGNAQEA-SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI---------P 149
+ +T N + + + + F+ +IVT YH+ R + ++++ + I P
Sbjct: 244 STSTIENLKFSHALIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLTGIGAHTPLYYLP 303
Query: 150 YPIISHDLEENSSIFKIKILRVL-LIEYLKILLLSIQL 186
+ + L ++ VL L Y + ++L
Sbjct: 304 FAMFREYLALIVMYRWANLVAVLGLTAY--YVAALVRL 339
>gi|261866989|ref|YP_003254911.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412321|gb|ACX81692.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ + I ++G ++ L+++ I + + I A +T
Sbjct: 213 QRLEKTLEIAKQNPDALIIVTGGVPQNNRTEGALMKQWLINKGIDAKRIYADNYARSTVE 272
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRI 141
NA + K++ H +++ H+ R E+ +
Sbjct: 273 NALFSRYALAKHHIKHASLISSGSHVRRGQALFEIAAL 310
>gi|296139777|ref|YP_003647020.1| hypothetical protein Tpau_2069 [Tsukamurella paurometabola DSM
20162]
gi|296027911|gb|ADG78681.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 253
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + + + + ++G + K +++ I Q ++ + A +T+G
Sbjct: 120 ERLTKGLAVAQAYPAFPVIVTGGNPKAGKTEAAAMKEWLIGQGISPTRVYTENGAGSTQG 179
Query: 106 NAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NA +A +N F + ++VT H R+ + + + V +++ D + S
Sbjct: 180 NAINTAALMRQNGFGNGAVLVTSADHTRRSVADF--LVAGVTLQ--AVVASDAKIQS 232
>gi|289550052|ref|YP_003470956.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
gi|289179584|gb|ADC86829.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
Length = 317
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 16/148 (10%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIER 52
+ + I + F ++ + + +H + I+VL R+ R
Sbjct: 113 LFIWFSLIAISTLTTFALYLCFSSAFGRMTNHCTFDGIIVLGAGIFTEAVTPLLASRLNR 172
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A + Q I +SG +S+ + +++ + + E I + + NT N
Sbjct: 173 ALSIYNQQSHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQSIIMEAHSTNTAENFLY 232
Query: 110 ASAWAEKNNFH--HVLIVTHDYHMPRTF 135
+ + + +L+VT +H+ R
Sbjct: 233 SKSIIDAMTPKPNKLLVVTSQFHILRAL 260
>gi|158312620|ref|YP_001505128.1| hypothetical protein Franean1_0764 [Frankia sp. EAN1pec]
gi|158108025|gb|ABW10222.1| hypothetical protein Franean1_0764 [Frankia sp. EAN1pec]
Length = 212
Score = 51.4 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+F F F+ + P V AIV+ G P R+E A L + +S
Sbjct: 58 MFLGATFRLFVHPRRDSPAP----VDAIVMFAGSPGRLEHAVSLAVAGYAPMLAVS---- 109
Query: 73 SVSKDILLQKIPIRQDLAEC-CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
V P + I L T+G ++ +A A + ++ VL++T
Sbjct: 110 -VPTAD----DPCPPAIPNVEVICFAPDPLTTQGESRWVAAAAARYDWKSVLVITSTSQT 164
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEEN 160
R L L R S + P+ +
Sbjct: 165 TRARLRLGRCYSGQVLMS-PVAPSKIMWP 192
>gi|258404265|ref|YP_003197007.1| hypothetical protein Dret_0127 [Desulfohalobium retbaense DSM 5692]
gi|257796492|gb|ACV67429.1| protein of unknown function DUF218 [Desulfohalobium retbaense DSM
5692]
Length = 258
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 38/199 (19%)
Query: 24 RYVKQMHIPDHPSVSA--IVVLTGEPI-----------------RIERAFELLENQIGEK 64
+ + + A +VVL G R+ ++ G
Sbjct: 68 GRFPAIDMTAAKAADAQWVVVLGGGHASDPGLPVSAKVGTSTMYRLVEGVRIVRQLPGAT 127
Query: 65 IFISG------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ +SG V ++ K L + + L + + +T AQEA+ E+
Sbjct: 128 LLLSGYAGKEAVSNARIKADLAKALGYEGPL-----VLEERPRDT---AQEAAMITERLG 179
Query: 119 FHHVLIVTHDYHMPRTFLEL--QRINSTVQFIPYPIISHDLEENSSIFKIKI---LRVLL 173
++VT HMPR Q + + L+ + L+ +
Sbjct: 180 QAPFVLVTSASHMPRAMALFQGQGSHPIAAPTGHLAPREALQAWDWFPNAQDAYCLQRAV 239
Query: 174 IEYLKILLLSIQLSLSTQT 192
EYL + ++ L
Sbjct: 240 YEYLGLGWAWLRGQLEQPV 258
>gi|284038771|ref|YP_003388701.1| hypothetical protein Slin_3912 [Spirosoma linguale DSM 74]
gi|283818064|gb|ADB39902.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 222
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 10/126 (7%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIP 84
AI+VL +R+ ER EL + SG +++ + +I
Sbjct: 24 PLTKADAILVLCSHDLRVAERGAELFLEGWAPLLIFSGGLGVITRFMWTEPEADMFARIA 83
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRIN 142
+ I I ++ NT N Q + ++V Y R+F +++
Sbjct: 84 QDMGVPAEHILIENRSSNTGENVQFTRQLLAERKLEIDKFIVVQKPYMERRSFATFRKVW 143
Query: 143 STVQFI 148
Q I
Sbjct: 144 PEKQVI 149
>gi|226951670|ref|ZP_03822134.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
gi|226837586|gb|EEH69969.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
Length = 284
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVLTGE----------PIRIER 52
W ++C +++ F Y+ + SV+AI+VL R++R
Sbjct: 92 WRFGWLCFWVWLISLGYFFNYLNKNNSQVEVPTSVAAIIVLGSGIENGQPSATLAKRLDR 151
Query: 53 AFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A + L + + GV ++ + + + + + I + K+ +TE N +
Sbjct: 152 AAPIALTQPNAKLLLTGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLK 211
Query: 109 EASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
+ + + + IVT D+H R
Sbjct: 212 NSHPLLQAHKISLQQPIAIVTSDFHTLRAAA 242
>gi|119513211|ref|ZP_01632257.1| hypothetical protein N9414_00055 [Nodularia spumigena CCY9414]
gi|119462138|gb|EAW43129.1| hypothetical protein N9414_00055 [Nodularia spumigena CCY9414]
Length = 188
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 12 LIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LI +++ + + M I P AI VL G+ R++ A + ++ I++
Sbjct: 7 LIRWVLAIALVLVSIIPMRIAIAFYQAPVPQAIFVLGGDSERMKFAAQFWQSHQNLDIWV 66
Query: 68 SG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
S + ++ I Q + L + +A +T N + ++ ++
Sbjct: 67 SDFPGNLDANRRIFWQYGVSDEKLH-----LDGRATDTVTNFTTLVEEFADRDLQNIYLI 121
Query: 126 THDYHMPRTFLELQRIN--STVQFIPYPIISHDLEENSSIFKIKIL 169
T DYHM R+ + + + P + S E S + ++
Sbjct: 122 TSDYHMRRSRVIASVVLGSQGIVVTPLAVPSSGQEPESLLRVLRDA 167
>gi|118469130|ref|YP_890171.1| hypothetical protein MSMEG_5945 [Mycobacterium smegmatis str. MC2
155]
gi|118170417|gb|ABK71313.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 192
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI--RIERAFELLENQIGEKIF 66
+ + G ++ Q+ P H A+++L G P R F+L + +
Sbjct: 26 LILTAALVAGLPVYV--FPQVDPPRH--ADAVLIL-GGPDYRRYGFGFDLGREGWAQTVV 80
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+S + + + D + + I T+G +E AE+N + V++VT
Sbjct: 81 VS--NPNGADDPFMTEYCAEPHPEFHLICFIPDPRTTKGEGRELRRLAEENGWQRVIVVT 138
Query: 127 HDYHMPRTFLELQR 140
H+ R L++
Sbjct: 139 IRPHISRARYILEQ 152
>gi|150016674|ref|YP_001308928.1| hypothetical protein Cbei_1801 [Clostridium beijerinckii NCIMB
8052]
gi|149903139|gb|ABR33972.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 251
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIE 51
++ L V + + F+ ++ + + I+VL R++
Sbjct: 59 RYFRVLKVLICIGGIFFLGIEIFIINYPKYNKGNADYIIVLGAGLDTNSNPSLILQGRLD 118
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A E ++ I +SG + + ++K + + + E + I + NT+ N +
Sbjct: 119 AALEYIQEDDYRFIVLSGGQGSDEKLPESHAMKKYLLNRGVDEEKVIIEDNSRNTDENLK 178
Query: 109 EASAWAEKNNFHH-----VLIVTHDYHMPRT 134
+ A E+N+ + IVT D+H R+
Sbjct: 179 FSKAKIEENSGKSLDKLNIKIVTSDFHALRS 209
>gi|53716341|ref|YP_106250.1| hypothetical protein BMAA1685 [Burkholderia mallei ATCC 23344]
gi|53722689|ref|YP_111674.1| hypothetical protein BPSS1669 [Burkholderia pseudomallei K96243]
gi|67640781|ref|ZP_00439576.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|76818145|ref|YP_335892.1| hypothetical protein BURPS1710b_A0733 [Burkholderia pseudomallei
1710b]
gi|121597067|ref|YP_991282.1| hypothetical protein BMASAVP1_1688 [Burkholderia mallei SAVP1]
gi|124381902|ref|YP_001025692.1| hypothetical protein BMA10229_1895 [Burkholderia mallei NCTC 10229]
gi|126442720|ref|YP_001063394.1| hypothetical protein BURPS668_A2400 [Burkholderia pseudomallei 668]
gi|126446879|ref|YP_001077768.1| hypothetical protein BMA10247_A0567 [Burkholderia mallei NCTC
10247]
gi|126458095|ref|YP_001076296.1| hypothetical protein BURPS1106A_A2263 [Burkholderia pseudomallei
1106a]
gi|166999439|ref|ZP_02265278.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167743403|ref|ZP_02416177.1| hypothetical protein Bpse14_35344 [Burkholderia pseudomallei 14]
gi|167820589|ref|ZP_02452269.1| hypothetical protein Bpse9_36024 [Burkholderia pseudomallei 91]
gi|167828952|ref|ZP_02460423.1| hypothetical protein Bpseu9_35016 [Burkholderia pseudomallei 9]
gi|167850424|ref|ZP_02475932.1| hypothetical protein BpseB_34607 [Burkholderia pseudomallei B7210]
gi|167908429|ref|ZP_02495634.1| hypothetical protein BpseN_39774 [Burkholderia pseudomallei NCTC
13177]
gi|167915704|ref|ZP_02502795.1| hypothetical protein Bpse112_34808 [Burkholderia pseudomallei 112]
gi|167923545|ref|ZP_02510636.1| hypothetical protein BpseBC_33634 [Burkholderia pseudomallei
BCC215]
gi|237508202|ref|ZP_04520917.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|254175884|ref|ZP_04882542.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254205102|ref|ZP_04911455.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|52213103|emb|CAH39142.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52422311|gb|AAU45881.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76582618|gb|ABA52092.1| Uncharacterized ACR, COG1434 family [Burkholderia pseudomallei
1710b]
gi|121224865|gb|ABM48396.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|126222211|gb|ABN85716.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|126231863|gb|ABN95276.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|126239733|gb|ABO02845.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147754688|gb|EDK61752.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|160696926|gb|EDP86896.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|235000407|gb|EEP49831.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|238521564|gb|EEP85015.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|243064501|gb|EES46687.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|261826553|gb|ABM99690.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
Length = 255
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 39/233 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHP----SVSAIVVL---------TG- 45
R + G + +R ++ + +AIV+L TG
Sbjct: 26 RALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIAATGA 85
Query: 46 ------EPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLA 90
R+ A L + + KI +SG + V + + + + +
Sbjct: 86 VEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGID 145
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ +++NT NAQ + VL+VT H+ R+ L
Sbjct: 146 AADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFG----VAAI 201
Query: 151 PIISHDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ + L+ + I + L EYL I + +L A
Sbjct: 202 AVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLYNALGWNPARTRPGD 254
>gi|111225630|ref|YP_716424.1| hypothetical protein FRAAL6288 [Frankia alni ACN14a]
gi|111153162|emb|CAJ64911.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
Length = 184
Score = 51.0 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 9/175 (5%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R + + + + + R H V AIV+ G P R+ERA L
Sbjct: 15 RRRAVTIALVGVLAVAFTAATARLFVFPHRDRPAPVDAIVMFAGSPGRLERAVALARAGY 74
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ +S + + D P E I L T+G ++ A A + +H
Sbjct: 75 APVLAVS----TPTADD---PCPGTIPGVE-VICFAPSPLTTQGESRWVGAAAARRGWHS 126
Query: 122 VLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++++T R L L R V+ I P + + + LL++
Sbjct: 127 LIVITSTSQSTRARLRLGRCYPGEVRMIGVPPPRRMWPYMITYEWAAMGKALLLQ 181
>gi|134278721|ref|ZP_01765435.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134250505|gb|EBA50585.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 255
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 39/233 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHP----SVSAIVVL---------TG- 45
R + G + +R ++ + +AIV+L TG
Sbjct: 26 RALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIAATGA 85
Query: 46 ------EPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLA 90
R+ A L + + KI +SG + V + + + + +
Sbjct: 86 VEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGID 145
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ +++NT NAQ + VL+VT H+ R+ L
Sbjct: 146 AADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFG----VAAI 201
Query: 151 PIISHDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ + L+ + I + L EYL I + +L A
Sbjct: 202 AVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRLYNALGWNPARTRPGD 254
>gi|324998768|ref|ZP_08119880.1| hypothetical protein PseP1_08384 [Pseudonocardia sp. P1]
Length = 346
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH-IPDHPSVSAIVVLTGE----------PIR 49
+R W + F F++F+ Y + + +VVL R
Sbjct: 134 LRALWILCALAAYFLAFQFVAFLGYARLYRWLVRDRPADWVVVLGSGLHGSAVPPLLADR 193
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I L+ + + +SG +++ +++ + + + TE N
Sbjct: 194 IRAGMTELDRRGARMLVLSGGKGDDERLAEGEAMRRWAVDHGADPALLRAETASRTTEQN 253
Query: 107 AQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ + + LIVT DYH+ R + +R+ Q P +
Sbjct: 254 LRLSDELVRGDPDPAGPGLIVTSDYHVFRAAVLARRLGVDAQAAGAPTAGYYWPSAVLRE 313
Query: 165 KIKILR 170
+ ILR
Sbjct: 314 FVAILR 319
>gi|300855460|ref|YP_003780444.1| hypothetical protein CLJU_c22840 [Clostridium ljungdahlii DSM
13528]
gi|300435575|gb|ADK15342.1| conserved membrane spanning protein [Clostridium ljungdahlii DSM
13528]
Length = 260
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 16/135 (11%)
Query: 34 HPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
+ I +L G R + A + ++ G K+ SG +S+ +
Sbjct: 102 NKKPDYITILGGGISGRNMLLVQLQRTQEALKYIKQNPGIKVIASGGQGRGEDISEAEAM 161
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFLE 137
+ ++ + I K+ NT N + +K + +VT ++H+ R
Sbjct: 162 RIYLVQHGVKNEDIIKEEKSKNTLENMKYTREILKKIDGRENIQLAVVTSNFHVFRAKFL 221
Query: 138 LQRINSTVQFIPYPI 152
+R V+ +P P+
Sbjct: 222 AKRYGFQVEGVPAPV 236
>gi|150389466|ref|YP_001319515.1| hypothetical protein Amet_1679 [Alkaliphilus metalliredigens QYMF]
gi|149949328|gb|ABR47856.1| protein of unknown function DUF218 [Alkaliphilus metalliredigens
QYMF]
Length = 196
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 37 VSAIVVL------TGEP-----IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKI 83
A VVL G P R+++A EL E + +SG D +++
Sbjct: 43 ADAAVVLGNKVELDGTPSPRLQGRLDKAVELYEKGYFNYVIVSGGTGKEGFDEALVMKDY 102
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
++ ++ + + + + N+ A+ + + V +++ YH+ RT L +++
Sbjct: 103 LVKNEIPDDKVILDQEGYNSMMTAKNTKIIMDHMDLESVTVISQFYHITRTKLAFRKVG- 161
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLLIE---YLKILLLSI 184
++ F + + + E Y K L + +
Sbjct: 162 ---------FEQVYSAHAEYFDFRDIYSIAREFAGYYKYLFMKV 196
>gi|297160757|gb|ADI10469.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
Length = 229
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 19/171 (11%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
+ ++ + + D PS VV R++ EL E
Sbjct: 27 LSVVALLPATWLRLATDARVRTVADVPSAPVAVVFGAGLWNGEPSPYLAHRLDATAELYE 86
Query: 59 NQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
I ++G + H + ++ +R + + I Y +T + A
Sbjct: 87 RGKIRAILVTGDNSRHDYDEPDAMRAYLVRHGVPDQRIVSDYAGFDTWDSCSRAERIF-- 144
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
H ++V+ D+H+ R + Y + + + + +F
Sbjct: 145 -GVHRAVLVSQDFHIRRALALCEAAGID----AYGVGVAEPHDATWLFGGA 190
>gi|268678711|ref|YP_003303142.1| hypothetical protein Sdel_0069 [Sulfurospirillum deleyianum DSM
6946]
gi|268616742|gb|ACZ11107.1| protein of unknown function DUF218 [Sulfurospirillum deleyianum DSM
6946]
Length = 261
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 46/227 (20%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMH--IPDHPSVSAIVVLTGE----------- 46
R F+ V ++ ++ +++ + +V A++VL G
Sbjct: 36 RLFFLANAVVFYLLSNAYVADWLLKPLEEPYNQPLHVTAVDAVIVLGGGHTQGVANLPLS 95
Query: 47 ---PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQ-------KIPIRQDL 89
R+ + ++ + SG D L + P + L
Sbjct: 96 SDAYKRMMWGLMVAKSHKLP-LLFSGGGLYKEYLESDAFLDSLKELKSYLDIATPNSKSL 154
Query: 90 AECCIDI--GYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTV 145
A + K+L+T NAQ + EK + +VT YHM R+ + + V
Sbjct: 155 ATKEFSLHVEDKSLDTYQNAQFSKTAFEKAGVMGPTIYLVTSAYHMKRSIMLYEHFGFNV 214
Query: 146 QFIPYPI-ISHDLEENSSIFKIKILRVL------LIEYLKILLLSIQ 185
IP + E + L L EY +L L ++
Sbjct: 215 --IPAATNFKINHREKDGWDYLPSAHALYKSYIALHEYAGLLSLKLR 259
>gi|218889732|ref|YP_002438596.1| hypothetical protein PLES_09901 [Pseudomonas aeruginosa LESB58]
gi|254236878|ref|ZP_04930201.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242671|ref|ZP_04935993.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109425|ref|ZP_07795385.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
gi|126168809|gb|EAZ54320.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196049|gb|EAZ60112.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769955|emb|CAW25717.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881887|gb|EFQ40481.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
Length = 253
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 36/143 (25%)
Query: 36 SVSAIVVLTGEPIRI-------ERAFELLEN---QIGEKI--------FISGVHHSVSK- 76
AIV+L R + A LL + ++ ISG H
Sbjct: 79 RADAIVIL--GAGRQTNDPAWGDDAPSLLAAERLRYAARLAKTSALPVLISGGLHYGRPP 136
Query: 77 -------DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ LLQ + E + T NA ++ + V++VT +
Sbjct: 137 SEAALMANALLQDFGVPTRWQEG------LSRTTWENATLSAPQLREAGVRRVVLVTQAW 190
Query: 130 HMPRTFLELQRINSTVQFIPYPI 152
HM R +R + IP P+
Sbjct: 191 HMQRARWSFER--QGFEVIPAPV 211
>gi|167899018|ref|ZP_02486419.1| hypothetical protein Bpse7_35118 [Burkholderia pseudomallei 7894]
Length = 255
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 39/233 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHP----SVSAIVVL---------TG- 45
R + G + +R ++ + +AIV+L TG
Sbjct: 26 RALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIEWGERNAIVMLGLGTEKIAATGA 85
Query: 46 ------EPIRIERAFELLEN-QIGE-----KIFISGVH---HSVSKDILLQKIPIRQDLA 90
R+ A L + + KI +SG + V + + + + +
Sbjct: 86 VEPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDALVGVGID 145
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ +++NT NAQ + VL+VT H+ R+ L
Sbjct: 146 SADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFG----VAAI 201
Query: 151 PIISHDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
+ + L+ + I + L EYL I + +L A
Sbjct: 202 AVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYQLYNALGWNPARTRPGD 254
>gi|86142614|ref|ZP_01061053.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
gi|85830646|gb|EAQ49104.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
Length = 220
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R+E A L ++ +SG + + + + ++K + + + E I + + +T
Sbjct: 72 RDRVESALLLYNKGKIKRFLVSGDNRTTNYNEPVAMKKYLLERGVPEEDIFMDFAGFDTY 131
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ AS E ++V+ +H+PR + R + F Y
Sbjct: 132 DSVYRASYIFE---VDSAIVVSQRFHLPRAVY-IARSM-GLNFYGY 172
>gi|296387487|ref|ZP_06876962.1| hypothetical protein PaerPAb_05012 [Pseudomonas aeruginosa PAb1]
Length = 222
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 36/143 (25%)
Query: 36 SVSAIVVLTGEPIRI-------ERAFELLEN---QIGEKI--------FISGVHHSVSK- 76
AIV+L R + A LL + ++ ISG H
Sbjct: 48 RADAIVIL--GAGRQTNDPAWGDDAPSLLAAERLRYAARLAKTSALPVLISGGLHYGRPP 105
Query: 77 -------DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ LLQ + E + T NA ++ + V++VT +
Sbjct: 106 SEAALMANALLQDFGVPTRWQEG------LSRTTWENATLSAPQLREAGVRRVVLVTQAW 159
Query: 130 HMPRTFLELQRINSTVQFIPYPI 152
HM R +R + IP P+
Sbjct: 160 HMQRARWSFER--QGFEVIPAPV 180
>gi|282861775|ref|ZP_06270839.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
gi|282563591|gb|EFB69129.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
Length = 245
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + + ++G + V + ++ + + I Y +T
Sbjct: 87 AHRLDAAAELYRSGKVKVLLVTGDNSRVEYDEPDAMRTYLTAHGVPDGRIVSDYAGFDTW 146
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A ++V+ +H+ R + Y + + + +
Sbjct: 147 DSCVRAKKIF---GVDRAVLVSQGFHIRRAVALCRSAGID----AYGVGVDAVHDATWY 198
>gi|167947128|ref|ZP_02534202.1| probable transmembrane protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 250
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 37/215 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQ---------MHIPDHPSVSAIVVLTGEPI-------- 48
+F L+ ++ + Q AI+VL G
Sbjct: 38 VFVFALLLLWVTSLPITADLLAQGLEIHPALSEERLAESHPEAIIVLGGGRNLDAPEYGG 97
Query: 49 ---------RIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDI 96
R+ A +L Q G + SG + + +I ++ + I
Sbjct: 98 DTVSARELERLRYAAKL-ARQTGLPVIPSGGAPIYFGEPEAKIAARI-LQDEFGVSVSQI 155
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ T NA+ ++ +K VL+VT+ HM R +R V P I
Sbjct: 156 EAASNTTWDNARLSAQLLKKLGIKQVLLVTNALHMRRAIYAFERNGVEVIAAPTSFIHKT 215
Query: 157 LEENSSIFK-IKILRV-----LLIEYLKILLLSIQ 185
+ + L V + EY+ +L +
Sbjct: 216 NTRHVWLEGLPNGLAVKNVAYAMHEYVGLLWYYFK 250
>gi|254428687|ref|ZP_05042394.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194856|gb|EDX89815.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 204
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 35/189 (18%)
Query: 26 VKQMHIPDHPSVSAI-----VVL--------------TGEPIRIERAFELLENQIGEKIF 66
V+ P ++ I VVL T R++ A EL G +
Sbjct: 20 VRSFLPPLPRRITGITPQAVVVLGAGRRQRNGRFSLTTRGLRRLKLAAELAHE-HGLPLL 78
Query: 67 ISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+SG + S+ L+ + +R + ++ NT NA +S +
Sbjct: 79 VSGGISQTPMHDNEPSEADLMAEQALR-RWPTLNVIKEARSRNTWENACFSSELLAERGM 137
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV---LLIEY 176
V++++ H+PR L Q + S L + + L + + E+
Sbjct: 138 DEVMLISDRAHLPRALLCFQSQG----VLAQAAWSKRLPKQEWVPSAGALSMVPEIWYEW 193
Query: 177 LKILLLSIQ 185
L ++ ++
Sbjct: 194 LALVWYHVR 202
>gi|261210655|ref|ZP_05924947.1| SanA protein [Vibrio sp. RC341]
gi|260840140|gb|EEX66720.1| SanA protein [Vibrio sp. RC341]
Length = 217
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL + +SG H S ++ +++ +R + I + Y T
Sbjct: 57 NRIDAAIELYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGVPAENISLDYAGFRTLD 116
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + NNF LI+T +H R
Sbjct: 117 SIVRAKQIFDTNNF---LIITQRFHCERALF 144
>gi|229544814|ref|ZP_04433539.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256854151|ref|ZP_05559516.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229310086|gb|EEN76073.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256711094|gb|EEU26137.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|315030796|gb|EFT42728.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 193
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A ++ + +SG ++ ++++ + + + E I + +A T
Sbjct: 63 QARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRT 122
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ N + +F ++IVT D+HM R+ L +R
Sbjct: 123 KENIVNSQKLF---SFKRLVIVTSDFHMYRSQLLAKRAG 158
>gi|116334369|ref|YP_795896.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
gi|116099716|gb|ABJ64865.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
Length = 329
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 22/191 (11%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVK---QMHIPDHPSVSAIVVLTGE-----------PIR 49
FW L IF I I F + + ++ IV+L R
Sbjct: 120 FWPWLSFIPIFSIYLGILFGASIIGYLRANVWRARRADTIVILGAGLRHGSQIGRTLANR 179
Query: 50 IERAFELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A +L Q I G +++ + + + I +A +T
Sbjct: 180 LDAALKLAHRQSTPTTLIVTGGQGPDEHLTEAEAMTTYLVNHGWPQERIIQESRATSTLT 239
Query: 106 NAQEA-SAWAE-KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N + W++ + V+IVT++YH+ R ++ + YP + ++
Sbjct: 240 NLLYSQRLWSQLPHQGGRVVIVTNNYHLFRAEHLASQL--GLLLGGYPAPTRRGYLPAAW 297
Query: 164 FKIKILRVLLI 174
+ + ++L
Sbjct: 298 AREFLAIIMLH 308
>gi|89890987|ref|ZP_01202495.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516631|gb|EAS19290.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 221
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R+++A+EL + I +K +SG H D + +++ + + I + + +T
Sbjct: 65 QDRVDKAYELYDKGIIKKFLLSGDHGQEDYDEVNAMRRYLNDKGVPNQDIFLDHAGFDTY 124
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + ++++T ++H+PR
Sbjct: 125 DSMFRAREVFQ---VEELIVITQEFHLPRAIY 153
>gi|332288218|ref|YP_004419070.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
gi|330431114|gb|AEC16173.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
Length = 251
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 51/174 (29%), Gaps = 34/174 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTGEPIRIER------- 52
L F +F+ + P+ + IVVL G +R
Sbjct: 42 LLAVSLLFAYFISTPFFSNFLIKTIALDKPNVELYRQGQVIVVL-GGGLRYSDYPESYST 100
Query: 53 --AFELLENQIGEKI--------FISG-VHHSVSK--DILLQKIPIRQDLAECCIDIGYK 99
A L + + ISG V + L + I + K
Sbjct: 101 TAALPLERMRFAVYLHQMTDLPIAISGGVDNEAKVMGSELQRFFQIEPTW------LDNK 154
Query: 100 ALNTEGNAQEASAWA----EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ TE NA E V++VT+++HM R QR V P
Sbjct: 155 SNTTEQNAIYLRKLFNQTEEGKQIQRVILVTNEWHMRRAVAAFQRQGFEVFPAP 208
>gi|15599180|ref|NP_252674.1| hypothetical protein PA3985 [Pseudomonas aeruginosa PAO1]
gi|107103503|ref|ZP_01367421.1| hypothetical protein PaerPA_01004573 [Pseudomonas aeruginosa PACS2]
gi|9950176|gb|AAG07372.1|AE004816_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 253
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 36/143 (25%)
Query: 36 SVSAIVVLTGEPIRI-------ERAFELLEN---QIGEKI--------FISGVHHSVSK- 76
AIV+L R + A LL + ++ ISG H
Sbjct: 79 RADAIVIL--GAGRQTNDPAWGDDAPSLLAAERLRYAARLAKTSALPVLISGGLHYGRPP 136
Query: 77 -------DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ LLQ + E + T NA ++ + V++VT +
Sbjct: 137 SEAALMANALLQDFGVPTRWQEG------LSRTTWENATLSAPQLREAGVRRVVLVTQAW 190
Query: 130 HMPRTFLELQRINSTVQFIPYPI 152
HM R +R + IP P+
Sbjct: 191 HMQRARWSFER--QGFEVIPAPV 211
>gi|50084012|ref|YP_045522.1| hypothetical protein ACIAD0798 [Acinetobacter sp. ADP1]
gi|49529988|emb|CAG67700.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 221
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+++ W+G ++ +++ + F Y+ IP V AI+VL
Sbjct: 29 IKFAWFGFWI----WLLSVLIFFIYIDHSTQNIPKTNDVKAIIVLGSGVENGQPSAILAE 84
Query: 49 RIERAFELLENQIGEKIFISGV--HHSV-SKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
R+ A ++ I +SG H ++ ++++ +Q + + ++ +TE
Sbjct: 85 RLNTAAHFAKDHPAALIILSGGLDHREQQTEAEVMRRYLKQQFPALRNTLALEDQSTSTE 144
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRT 134
N + + E++ ++IVT D+H R+
Sbjct: 145 LNLKNSKPILEQHQILLNDPIVIVTSDFHTIRS 177
>gi|260597320|ref|YP_003209891.1| hypothetical protein CTU_15280 [Cronobacter turicensis z3032]
gi|260216497|emb|CBA29665.1| Uncharacterized protein ycbC [Cronobacter turicensis z3032]
Length = 230
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 30/171 (17%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ IVVL G R+ L G K+ +G +
Sbjct: 45 NGQKADYIVVLGGGYTWNDKWAPSSNLVNNSLPRVTEGVRLWLANPGAKLVFTGARATTN 104
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + + I + +TE A + K F L+VT H+
Sbjct: 105 PVSTAEAGARVAESLGVPRSDIITLD-TPKDTEEEATAVAGALGKEPF---LLVTSASHL 160
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF-KIKILRVLLIEYLKI 179
PR + +R + IP P ++ N L ++ E
Sbjct: 161 PRAMIFFKR--QGLNPIPAPANQMAIDSPLNPWERVYPSSLWLMHSERAGY 209
>gi|256392318|ref|YP_003113882.1| hypothetical protein Caci_3132 [Catenulispora acidiphila DSM 44928]
gi|256358544|gb|ACU72041.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 236
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 54/156 (34%), Gaps = 15/156 (9%)
Query: 7 GLFVCLIFFIMGFI-SFIRYVKQMHIPDHPSVSAIVVLTGEPI---------RIERAFEL 56
L V L+F + + ++ ++ AIV G P R++ A +L
Sbjct: 25 ALAVVLMFAPVTAVHAYASPYQRSAAAVPYEPVAIVFGAGAPGGRPSPYLSRRLDVALDL 84
Query: 57 LENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
I ++G + + +++ + + + I + +T + + A
Sbjct: 85 YRRGKVTVILVTGDNSQPDYDEPSAMRQYLVERGVPAARIVRDFAGFDTWASCERAKKIF 144
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
H +VT D+H+PR L + +
Sbjct: 145 ---GVDHATLVTQDFHLPRALLLCRAAGIDAYGVAD 177
>gi|169794855|ref|YP_001712648.1| hypothetical protein ABAYE0681 [Acinetobacter baumannii AYE]
gi|215482402|ref|YP_002324584.1| hypothetical protein ABBFA_000666 [Acinetobacter baumannii
AB307-0294]
gi|301344954|ref|ZP_07225695.1| hypothetical protein AbauAB0_01897 [Acinetobacter baumannii AB056]
gi|301512264|ref|ZP_07237501.1| hypothetical protein AbauAB05_11802 [Acinetobacter baumannii AB058]
gi|301594344|ref|ZP_07239352.1| hypothetical protein AbauAB059_00995 [Acinetobacter baumannii
AB059]
gi|332853463|ref|ZP_08434782.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332870554|ref|ZP_08439296.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
gi|169147782|emb|CAM85645.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213988119|gb|ACJ58418.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332728669|gb|EGJ60037.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332732114|gb|EGJ63383.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
Length = 261
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P+V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSAILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L + I G+ S + + + + +A+ + + K+ +TE
Sbjct: 125 RLDTAAPVALSQPQAKVILTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFL 136
N + + E+ + + + IVT D+H PR
Sbjct: 185 LNLKNSKPLLEQAHINANQPIAIVTSDFHTPRAAA 219
>gi|253681527|ref|ZP_04862324.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561239|gb|EES90691.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 255
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 22/161 (13%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPS-VSA---IVVLTGEP-----------IRIERAF 54
V + F +G SFI + P I+VL G R++
Sbjct: 67 VIMFFMCIGLSSFIIIEGIIIYAGIPKPADEKKYIIVL-GAAVHGDYMSLILKKRMDATL 125
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ L+ KI +SG +++ +++ ++ + I K+ +T N + +
Sbjct: 126 DYLKKYPNTKIIVSGGKGPGELITEAEAMKRYLVKNGVNNNQIIKEEKSRSTGENFKYSL 185
Query: 112 AWAEKN---NFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
++ N V +VT D+HM R +RI V +P
Sbjct: 186 EILKQREKENIPSVCVVTTDFHMFRAEFLAKRIGINVCAVP 226
>gi|229817491|ref|ZP_04447773.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
gi|229785280|gb|EEP21394.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
Length = 253
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 22/145 (15%)
Query: 10 VCLIFFIMGFISFIRY----VKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
VC + G I F + M P + ++VL R+++A
Sbjct: 71 VCAVVLCTGLICFGAVEGWVISGMRAAGEPGLDYVIVL--GAQVHKTRPSLVLQYRLDKA 128
Query: 54 FELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+ LE+ +SG + + + R +A I K+ +T N +
Sbjct: 129 IDYLESNPNTICIVSGGKGANEPFPEAQGMAEYLERHGIAASRIIRESKSKDTRQNIANS 188
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTF 135
K N + I+T D+H+ R
Sbjct: 189 RRLMTKRN-ASIGIITSDFHVARAM 212
>gi|332653075|ref|ZP_08418820.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
gi|332518221|gb|EGJ47824.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
Length = 205
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 18/153 (11%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIV---VLTGE------PIRI 50
R+ L + L + G + Y H+ P V I+ V+ G R+
Sbjct: 11 RWLKILLALVLAGILCFAGLFGAVMYGAYDHVSGDPQVMIILGCRVMPGGEPSILLQDRL 70
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A + L++ + +SG + S+ + + I + K+ NT+ N
Sbjct: 71 DTALDYLDDHPDITVVVSGGQGSNEPTSEAACMADYLEEHGVDPDQILLEDKSSNTKENL 130
Query: 108 QEASAWAEKNNFH----HVLIVTHDYHMPRTFL 136
+ E+ VL+V++ +H+ R+ +
Sbjct: 131 IYSRELLEEQGVDVGEGGVLVVSNGFHLTRSRM 163
>gi|229491563|ref|ZP_04385384.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321244|gb|EEN87044.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 140
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A +L I SG V++ +++ + + I + +T
Sbjct: 31 DRLQAALQLARQYPQSPIITSGGAPKAGVTEARAMREWLVANGVNPGRITEEGTSWSTVE 90
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
NA ++ V++V+ H+ R ++ +
Sbjct: 91 NAINSARILADRGATGVVVVSSANHVERAMVDFRVA 126
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 18/171 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFI-SFIRYVKQMHIPDHPS-VSAIVVLTGEPI----------- 48
R F F L+ MG+ +R + + D AI V G
Sbjct: 23 RRFLLWCFCFLVLAAMGWSSWVVRQINLVAAQDQAQPADAIAVF-GAAEYSGRPSPVYHA 81
Query: 49 RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L QI + G ++ + + + + I +++TE
Sbjct: 82 RLDHAVTLYRKQIAPIVITFGGGSDKDSGKTEGGVGRDYLLANGIPFDKIIAETHSVDTE 141
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + AE+NN H+++V+ + H+ R +R V P P + H
Sbjct: 142 QQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVYTSPRPALGH 192
>gi|254423350|ref|ZP_05037068.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196190839|gb|EDX85803.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 234
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 8/123 (6%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
VL G P R A + + +I+IS G + Q I + + Y+A
Sbjct: 85 VLGGAPERERFAAQFAKTHPTVEIWISSGSNP-----EYAQWIFDEAQIPSEQWSLDYEA 139
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLE 158
++T N + N V ++T DYHM R ++ + + F P I +
Sbjct: 140 VDTVTNFTTLVDELDAQNIREVYLITSDYHMRRASIIAQIVLGSRGIAFKPVEIPTERSP 199
Query: 159 ENS 161
Sbjct: 200 HRP 202
>gi|311894949|dbj|BAJ27357.1| hypothetical protein KSE_15300 [Kitasatospora setae KM-6054]
Length = 240
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 21/172 (12%)
Query: 5 WYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ + +C + + ++ + K + P VV R++
Sbjct: 31 FQAVLLCSVLGLAPNAWLYLTQSAKVGTVASAPEAPVAVVFGAGLVDGEPSPYLAHRLDA 90
Query: 53 AFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
A EL I ++G + +V D ++ I + + + Y +T + A
Sbjct: 91 ALELYRAHKVRAILVTGDNGTVQYDETDAMRGYLIGRGVPAVRVVGDYAGFDTWDSCTRA 150
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
++V+ +H+ R + Y + + + +
Sbjct: 151 HRIF---GVDRAVLVSQTFHVRRALALCEAAGID----AYAVGVEEWHDTTW 195
>gi|315635988|ref|ZP_07891248.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315479709|gb|EFU70382.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 248
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 66/213 (30%), Gaps = 46/213 (21%)
Query: 13 IFFIMGFISFIRYVKQM-------------HIPDHPSVSA--IVVL-------------- 43
IF ++GF+ F Q I+VL
Sbjct: 39 IFLVLGFLWFALLSNQTISNMIISPLENAYPALKETPKDIKYILVLGNGHKTNDNFPITS 98
Query: 44 ---TGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
T R+ +N K+ +SG S + +K+ I + E I
Sbjct: 99 ELNTTAINRLIEGIRHYKNLENSKLIVSGYSFDDVNSHAQMQKKLAISLGVNETDIITLD 158
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+T+ A EA +++VT HM R + ++ + I P +H
Sbjct: 159 TPKDTKEEAIEAKKIV---GNQKLILVTTASHMKRAVMLFEK--EDLNIIASP-TNHKFF 212
Query: 159 ENSSIFKI------KILRVLLIEYLKILLLSIQ 185
++ K + + EYL ++ ++
Sbjct: 213 TSTYPTSYFNATNIKKVELAFHEYLGMVYSYVK 245
>gi|297625459|ref|YP_003687222.1| hypothetical protein PFREUD_02530 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921224|emb|CBL55774.1| Hypothetical secreted protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 223
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 22/182 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHI---PDHPSVSAIVVLTGE----------- 46
+R G+ V + G + + + + P+ +VL
Sbjct: 9 LRVILVGMVVLACLVLTGSWALVHGAARDRVFTAHSAPNRDVALVLGAGLNADGSPSLYL 68
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A++L +Q + I +SG + +V+ ++ + + + Y L+T
Sbjct: 69 AGRLRAAYDLYVSQKVKVILVSGDNRTVTYSEPGAMRSYLRLLGVPDRDVVADYAGLDTY 128
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A + V +V YH+ R + I + + S+
Sbjct: 129 DSCYRARNIF---GVNSVTVVGQSYHLDRAVATCRSIGIDDTI---GVSDEQSHDTSTWR 182
Query: 165 KI 166
Sbjct: 183 TG 184
>gi|194334537|ref|YP_002016397.1| hypothetical protein Paes_1732 [Prosthecochloris aestuarii DSM 271]
gi|194312355|gb|ACF46750.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 250
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 20/143 (13%)
Query: 27 KQMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV- 70
+++ + A+VVL G R E E+ + ++G
Sbjct: 62 RRVDVALLEPADAVVVLGGVTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAK 121
Query: 71 ---HHSVSKD-ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ LL++ + + E + + + NT A+E V++VT
Sbjct: 122 MPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILVT 181
Query: 127 HDYHMPRTFLELQRINSTVQFIP 149
+HM R + + V P
Sbjct: 182 SAFHMRRAAMLFRHAGLRVDEFP 204
>gi|157736806|ref|YP_001489489.1| hypothetical protein Abu_0553 [Arcobacter butzleri RM4018]
gi|157698660|gb|ABV66820.1| conserved hypothetical protein (DUF218 domain protein) [Arcobacter
butzleri RM4018]
Length = 248
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 66/213 (30%), Gaps = 46/213 (21%)
Query: 13 IFFIMGFISFIRYVKQM-------------HIPDHPSVSA--IVVL-------------- 43
IF ++GF+ F Q I+VL
Sbjct: 39 IFLVLGFLWFALLSNQTISNMIISPLENAYPALKETPKDIKYILVLGNGHKTNDNFPITS 98
Query: 44 ---TGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
T R+ +N K+ +SG S + +K+ I + E I
Sbjct: 99 ELNTTAINRLIEGIRHYKNLENSKLIVSGYSFDDVNSHAQMQKKLAISLGVNEADIITLD 158
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+T+ A EA +++VT HM R + ++ + I P +H
Sbjct: 159 TPKDTKEEAIEAKKIV---GNQKLILVTTASHMKRAVMLFEK--EDLNIIASP-TNHKFF 212
Query: 159 ENSSIFKI------KILRVLLIEYLKILLLSIQ 185
++ K + + EYL ++ ++
Sbjct: 213 TSTYPTSYFNATNIKKVELAFHEYLGMVYSYVK 245
>gi|299822206|ref|ZP_07054092.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815735|gb|EFI82973.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 348
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 19/151 (12%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIG 62
FF + V + ++VL RI++A + +G
Sbjct: 146 FFCVALNFTSLSVIYRYAKKPRQPDFLIVLGSGLIGGNRVPPLLAARIDKAIAFYKASVG 205
Query: 63 EKIFIS-----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA--E 115
+ I G ++S+ +Q+ I + + E + + T N + ++
Sbjct: 206 ARPQIVFSGGKGADETISEAEAMQQYAIAKGIPEQDTLVEKNSRTTYENMRFSAEIMANR 265
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
K N+ + T++YH+ R + ++ +
Sbjct: 266 KTNYEAIFF-TNNYHVLRAGMFARKAGLAIN 295
>gi|75907260|ref|YP_321556.1| hypothetical protein Ava_1037 [Anabaena variabilis ATCC 29413]
gi|75700985|gb|ABA20661.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 188
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 10/166 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ L + LIF + + +Q +P AI VL G+ R+ A + ++
Sbjct: 5 LKLVKLILAIALIFTSIITVRIAIAFQQSPVPQ-----AIFVLGGDAERMRFAAKFWQSH 59
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I+IS + + D ++I ++ + E + + +A +T N + +
Sbjct: 60 QNLDIWIS--DFAWNLDN-NRRICLKFGVPEVKLHLDGRATDTVTNFTTLAGDFVEQRLQ 116
Query: 121 HVLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIF 164
H+ ++T DYHM R + + + P + S + S +
Sbjct: 117 HIYLITSDYHMRRAQAIATIVLGSQGIMVTPVAVTSKNQPSESLVR 162
>gi|325524355|gb|EGD02447.1| hypothetical protein B1M_21438 [Burkholderia sp. TJI49]
Length = 97
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + T NA+ ++ + ++VT Y M R L+ R P P+ ++
Sbjct: 2 LEPDSRTTYENAKFTASILRSRHDDARILVTSSYQMRRALLDFHRFGID----PQPVYAN 57
Query: 156 DLEENSSI 163
+ +
Sbjct: 58 RRDAQTGW 65
>gi|227544579|ref|ZP_03974628.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300910291|ref|ZP_07127751.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
gi|227185458|gb|EEI65529.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300892939|gb|EFK86299.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
Length = 271
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 28/175 (16%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV---HHSV 74
GF+ VK +P VL R+++A + KI +SG
Sbjct: 108 GFLVLGAAVKHGQVPP--------VL---ATRLDKAINCWKTHQSAKIIVSGGIVQKAKE 156
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S+ ++ I + I KALNT N AS + V++VT D+H+ R
Sbjct: 157 SEAEVMAAYLIAHGIPARKIIRENKALNTWQNLAFASQLIKPQE--TVVVVTSDFHVLRA 214
Query: 135 FLELQRINSTVQFI---------PYPIISHDL---EENSSIFKIKILRVLLIEYL 177
+++ FI P I L ++ +F L +LL+E++
Sbjct: 215 RAYARKMGLNWSFISSKTPWRYCPLTFIRDYLGIIRDHWWVFCGSTLFLLLVEFI 269
>gi|210608912|ref|ZP_03288049.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
gi|210152829|gb|EEA83835.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
Length = 248
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 58/150 (38%), Gaps = 19/150 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ Y G+F+ L +++ F + + M ++ I++L
Sbjct: 55 LEYILTGIFIVL--WMIFFCVEVLILCAMISVAPKNMKYIIIL--GAQIRGKRVTEALKR 110
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++R L + +SG +++ + + + I + K+ +T
Sbjct: 111 RLDRGIRYLNENPETIVIVSGGRGKGEDITEAEAMAEYLENCGIDANRICLEEKSTSTYE 170
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
N +++ A+ + + IVT+++H+ R
Sbjct: 171 NLKKSLAFIDDERRDKIGIVTNNFHIYRAV 200
>gi|167573468|ref|ZP_02366342.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 255
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 17/163 (10%)
Query: 44 TGEPIRIERAFELL------ENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
T R+ A L G KI +SG + V + + + I + +
Sbjct: 90 TFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYRDALIGLGIDAADV 149
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+++NT NAQ VL+VT H+ R+ L P+ +
Sbjct: 150 LSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSVLYFAHFG----VAAIPVRA 205
Query: 155 HDLEE----NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
L+ + + L EYL I + +L A
Sbjct: 206 EYLQAMLFPLPLAYNFSAADLALHEYLGIARYRLYDALGWNPA 248
>gi|209694358|ref|YP_002262286.1| hypothetical protein, putative phage gene [Aliivibrio salmonicida
LFI1238]
gi|208008309|emb|CAQ78460.1| putative exported protein, putative phage gene [Aliivibrio
salmonicida LFI1238]
Length = 337
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 36 SVSAIVVLTGEP------IRIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQ 87
+ ++VL P R+ +A+ L I +SG + + + +
Sbjct: 115 KPNGLIVLGSTPKLGILESRLNQAYTLAIKYPNMPIILSGKGRKNNVIEADYMYDYLKDK 174
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINS 143
+ + ++L+T GNA+ + ++N + L++T++YH R+ RI
Sbjct: 175 GIETKRMYKESESLDTVGNAEFSYFTIQENPSLNKIKNWLVITNNYHAMRSLFNFSRIFP 234
Query: 144 TVQFI 148
I
Sbjct: 235 ESYTI 239
>gi|114320844|ref|YP_742527.1| hypothetical protein Mlg_1691 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227238|gb|ABI57037.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 204
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 19/165 (11%)
Query: 33 DHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGV-HHSVSKDI-- 78
D + A V+L G RI A L E + + +G
Sbjct: 26 DDTAADAAVIL-GAAAWNGRPSPVLRERIHHALSLYEAGQVDLLIFTGGQAPGEPLAESV 84
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + + LA + +T N + A+A +++ VL+V+ H+ R
Sbjct: 85 AAARYALARGLAAEDAYCEVASADTWNNLRGAAAVVAEHDLGRVLVVSDPLHLRRAV--- 141
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ + +P + K L + Y LL
Sbjct: 142 -AMARDLGLDAHPAPTPTSRFRGLEAKRNFLWAEVRLYGGYLLQR 185
>gi|258512251|ref|YP_003185685.1| hypothetical protein Aaci_2287 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478977|gb|ACV59296.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 259
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 31 IPDHPSVSAIVVL-----------------TG-----EPIRIERAFELLENQIGEKIFIS 68
P P+ AIVVL TG R+ A L + S
Sbjct: 69 PPARPTGDAIVVLGAGFSAATPDFADPALDTGTLYGDSGERVLAAAALYRRLHLPIVL-S 127
Query: 69 GV------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
G S + ++ + + + + + + TE NA+ + + +
Sbjct: 128 GGPLIRANGKSYAFALIAARDLAALGVPQRDLYVDATSRTTEENAEHTAVMLRRLHRSRP 187
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++V M R ++ +R+ V+ PYP+
Sbjct: 188 ILVASAAQMARAVIDFRRV--GVKVEPYPV 215
>gi|291286558|ref|YP_003503374.1| hypothetical protein Dacet_0629 [Denitrovibrio acetiphilus DSM
12809]
gi|290883718|gb|ADD67418.1| protein of unknown function DUF218 [Denitrovibrio acetiphilus DSM
12809]
Length = 190
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 16/112 (14%)
Query: 39 AIVVLTG-----------EPIRIERAFELLENQIGEKIFISGVH----HSVSKDILLQKI 83
AI+VL R++ A E + G S+ ++K
Sbjct: 5 AIIVLANLMDREGFLNEETSRRMDLAIEEFNKDKAPWMITCGWDYRDDSSIKIADAMKKY 64
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASA-WAEKNNFHHVLIVTHDYHMPRT 134
+++ I + + +T G+A + + +L+VT DYH+ RT
Sbjct: 65 AKEKNIPVDRIIVELNSRDTVGDAIFTKNNIVKNKEWKKILVVTSDYHVDRT 116
>gi|153810184|ref|ZP_01962852.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
gi|149833363|gb|EDM88444.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
Length = 194
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 22/162 (13%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSKD----------------- 77
I V ++ ERA +L + + SG + +
Sbjct: 21 KADIIFVPGNGYSQMAERAAQLYAKKYALFVLPSGKYSISTGRFGGVLTGQKRYSGEYQT 80
Query: 78 --ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPR 133
L+ + ++ + + +A T NA+ + ++ +I +YH R
Sbjct: 81 EWEFLKDVLMKNGVPADAVLKEDQATFTWENAKFSRKVTDQAGINIRKAIICCKNYHARR 140
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ QR +F P + ++ + ++ +L E
Sbjct: 141 ALMYYQRAYPDTEFRVCPCCVDGITRDNWTESERGIKEVLAE 182
>gi|255523534|ref|ZP_05390502.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296186506|ref|ZP_06854909.1| SanA family protein [Clostridium carboxidivorans P7]
gi|255512791|gb|EET89063.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296048953|gb|EFG88384.1| SanA family protein [Clostridium carboxidivorans P7]
Length = 231
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R++ A E+ + KI ++G H ++ D + ++K ++ + I + + +T
Sbjct: 77 KDRVDTALEIYKENSNLKILVTGDHGNLQYDEVNNMRKYLEQRGIKSSSIFLDHAGFSTY 136
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + N +IVT DYH+ R
Sbjct: 137 ESIYRAKHIFKVN---SAVIVTQDYHLKRAVY 165
>gi|299133065|ref|ZP_07026260.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298593202|gb|EFI53402.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 202
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 30/144 (20%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSK------------DILLQKIPIRQDLAECCI 94
P I+ A +L + + ++I+ISG + + Q+I I + + I
Sbjct: 40 PSNIDPAIDLFKAGLTKRIWISGKGPKPRRWRPFKKNKAEPESRIYQRIAIERGIPAEAI 99
Query: 95 DIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFL--------ELQRIN 142
+ ++ NT N ++ E N V + YHM R + L+ +
Sbjct: 100 WVEDRSSNTLENFVFSAEMIEAAFGWTNIRTVSLTAKPYHMRRVLMTALKVWPAHLRYVM 159
Query: 143 STVQFIPYPIISHDLEENSSIFKI 166
Y L+
Sbjct: 160 RP----SYAEDDPPLDV--WWTSP 177
>gi|94264712|ref|ZP_01288492.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454821|gb|EAT05071.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 96
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY-----PIISHDLE 158
NA + K+ VL+VT HMPR+ + + P P H L
Sbjct: 10 RENALYTAPLVGKH---PVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPLHPLR 66
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ L EYL +L+ ++
Sbjct: 67 LLPDAHSLHQSTSALKEYLGLLVYRLR 93
>gi|307330069|ref|ZP_07609220.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306884330|gb|EFN15365.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 225
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNT 103
+ A +L E + + +G +++ + ++ + + + + A NT
Sbjct: 41 DTAVDLYERGMAPLLVFTGATSPTTRERMPRGEAVHYRERALELGVPSSAVLLEPHARNT 100
Query: 104 EGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + A E++ VL+++ Y R++ +++ V+ +
Sbjct: 101 GENIRFSKALLEESGIDVSSVLLISKPYEERRSYATARKLWPEVEIV 147
>gi|182625897|ref|ZP_02953662.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177908810|gb|EDT71308.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
Length = 207
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTF 135
+++ R D+ I + K+ NT NA + + N ++ +H R
Sbjct: 81 EFCKEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRAL 140
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIF-KIKILRVL---------LIEYLKIL 180
+ QF P+ + + +++ I RVL EY+K L
Sbjct: 141 ITYSLAYPNTQFYVVPVETQGISKDNWYKSDYGINRVLGELRKCGSYFEEYIKDL 195
>gi|168216074|ref|ZP_02641699.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182381565|gb|EDT79044.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 207
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTF 135
+++ R D+ I + K+ NT NA + + N ++ +H R
Sbjct: 81 EFCKEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRAL 140
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIF-KIKILRVL---------LIEYLKIL 180
+ QF P+ + + +++ I RVL EY+K L
Sbjct: 141 ITYSLAYPNTQFYVVPVETQGISKDNWYKSDYGINRVLGELRKCGSYFEEYIKDL 195
>gi|110802720|ref|YP_698276.1| hypothetical protein CPR_0952 [Clostridium perfringens SM101]
gi|110683221|gb|ABG86591.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 199
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTF 135
+++ R D+ I + K+ NT NA + + N ++ +H R
Sbjct: 81 EFCKEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRAL 140
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIF-KIKILRVL---------LIEYLKIL 180
+ QF P+ + + +++ I RVL EY+K L
Sbjct: 141 ITYSLAYPNTQFYVVPVETQGISKDNWYKSDYGINRVLGELRKCGSYFEEYIKDL 195
>gi|110799112|ref|YP_695535.1| hypothetical protein CPF_1089 [Clostridium perfringens ATCC 13124]
gi|110673759|gb|ABG82746.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 199
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTF 135
+++ R D+ I + K+ NT NA + + N ++ +H R
Sbjct: 81 EFCKEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRAL 140
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIF-KIKILRVL---------LIEYLKIL 180
+ QF P+ + + +++ I RVL EY+K L
Sbjct: 141 ITYSLAYPNTQFYVVPVETQGISKDNWYKSDYGINRVLGELRKCGSYFEEYIKDL 195
>gi|148927289|ref|ZP_01810857.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147887295|gb|EDK72751.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 223
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 17/139 (12%)
Query: 41 VVLTGEPI--RIER-AFELLENQIGEKIFISGVHHSVSKD-------ILLQKIPIRQDLA 90
VV T R+ + EL G + ISG +SKD L I I +
Sbjct: 33 VVFTLGSSDRRVAVYSAELFLKGYGNYLVISGGFGRISKDRFHKTEAELFADIAIGMGVP 92
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR--INSTVQ 146
+ + KA NT N + + +L+V Y RT ++ +S V+
Sbjct: 93 PEKVVLETKASNTGENIRFTYNLLMQRGLRPKSLLLVHKPYMERRTLATFKKQWQDSNVE 152
Query: 147 FIPYPIISHDLEENSSIFK 165
+ S D+
Sbjct: 153 IF---VTSPDIAYEDYFTD 168
>gi|326317504|ref|YP_004235176.1| hypothetical protein Acav_2700 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374340|gb|ADX46609.1| protein of unknown function DUF218 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 272
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQ--MHIPDHPSVSAIVVLTGE----------PIRI 50
W + + +++ F +++ + + P V AIVVL R+
Sbjct: 78 LAWRMAWCAVGLWLVSVAWFWSWLRDYGVPPAEVPPVQAIVVLGAGTLDGQPRPTLAARL 137
Query: 51 ERAFELLENQ-IGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A EL Q G+ ++ + + + R +A I ++ +TE N
Sbjct: 138 DTAAELARRQPQALVAVCGGIDLGETESEAAIMARYLRERHGIAPGRIVQERESTSTELN 197
Query: 107 AQEASAWAEKNNFHHV---LIVTHDYHMPRT 134
+ + IVT D+H+ R
Sbjct: 198 IALSRPLLQARGVGAAAPTAIVTSDFHLMRA 228
>gi|313126704|ref|YP_004036974.1| hypothetical protein Hbor_19630 [Halogeometricum borinquense DSM
11551]
gi|312293069|gb|ADQ67529.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 188
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALN 102
R+ +F SG + + + ++ + +RQ + I + A +
Sbjct: 20 RARVNAGIRAFNATDASSLFFSGGQTNQHIDRTECGVMGEYAVRQGVDPDRIVLDPFAHD 79
Query: 103 TEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQR 140
T GNA + + +VT D+H PR +
Sbjct: 80 TIGNAYFTRVLCDNLGLDIDELSLVTDDFHAPRAKYAFDQ 119
>gi|298695620|gb|ADI98842.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 322
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 24/195 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+F L+ FI + + Y + + + V I+VL R++R
Sbjct: 116 WFAILCLSLLLTFICYLVWTVSYRHRSY---NKEVDIIIVLGAGIFTEFVTPMLAARLDR 172
Query: 53 AFELLENQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A ++ + Q KI +SG + + + +Q+ I + + I + ++NT N
Sbjct: 173 ALDIYQQQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFL 232
Query: 109 EASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSS 162
+ + ++ VT +H+ R Q++ ++ + PY H L ++
Sbjct: 233 YSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-Y 291
Query: 163 IFKIKILRVLLIEYL 177
+ + R+LL Y
Sbjct: 292 LGVMYQYRLLLTLYC 306
>gi|257095396|ref|YP_003169037.1| hypothetical protein CAP2UW1_3858 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047920|gb|ACV37108.1| protein of unknown function DUF218 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 233
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 29/214 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGE--PIRIERAFELLENQ 60
L + ++ F+ G +R Q+ P S AIV++ GE R+E A E
Sbjct: 8 ALVLTMVAFLGGLPPILRLPAQLLCVCEAPADASYEAIVIMMGEVEGRRVEAAAEYFRRG 67
Query: 61 IGEKIFISGVHHSVSKDI----------LLQKIPIRQDLAECCIDIGY-----KALNTEG 105
+ ++I I V S L + + +R + E I I Y +A ++
Sbjct: 68 VAKRINI--VQPESSLYEEYGVLRGQAFLARDLAVRLGVPEDRIHIIYGKDMARATSSFE 125
Query: 106 NAQEASAWAEK------NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
A+ A+ + +L+VT +H R +R+ + +
Sbjct: 126 EARYHLAYLQAGAPESGTEPRKILLVTDWFHTSRARWIFRRVFAGSGIDVDAAAARPEWV 185
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
+ EYLK ++ L
Sbjct: 186 AKWWTDEYAFIGVFNEYLKWTYYLLKYGLPKPDE 219
>gi|184159372|ref|YP_001847711.1| hypothetical protein ACICU_03052 [Acinetobacter baumannii ACICU]
gi|332876210|ref|ZP_08443987.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
gi|183210966|gb|ACC58364.1| uncharacterized conserved protein [Acinetobacter baumannii ACICU]
gi|322509284|gb|ADX04738.1| putative membrane protein [Acinetobacter baumannii 1656-2]
gi|323519312|gb|ADX93693.1| hypothetical protein ABTW07_3273 [Acinetobacter baumannii
TCDC-AB0715]
gi|332735605|gb|EGJ66655.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
Length = 261
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P+V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSAILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L + I G+ S + + + + +A+ + + K+ +TE
Sbjct: 125 RLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLEQHFHIAKDRMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
N + + E+ + + IVT D+H PR
Sbjct: 185 LNLKNSKPLLEQAHINVNQPIAIVTSDFHTPRAAA 219
>gi|307717857|ref|YP_003873389.1| transmembrane protein [Spirochaeta thermophila DSM 6192]
gi|306531582|gb|ADN01116.1| probable transmembrane protein [Spirochaeta thermophila DSM 6192]
Length = 249
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S+ ++ + E + + ++ T NA+ + VL+VT YH
Sbjct: 129 DEGKSEGEMMADLVRELGWEE--VVVEGESRTTWENARNTARMV---GRGPVLLVTSAYH 183
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-------LRVLLIEYLKILLLS 183
M R + V+ IP P+ D IF + I ++ L EY+ ++
Sbjct: 184 MQRAVWCFRA--QGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVGMVWYR 241
Query: 184 I 184
+
Sbjct: 242 V 242
>gi|283471580|emb|CAQ50791.1| membrane protein [Staphylococcus aureus subsp. aureus ST398]
Length = 322
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 24/195 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ ++ FI + + Y + + + V I+VL R++R
Sbjct: 116 WLAILCLSLILTFICYLVWTVSYRHRSYTKE---VDIIIVLGAGIFTEFVTPMLAARLDR 172
Query: 53 AFELLENQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A ++ + Q KI +SG +S+ + +Q+ I + + I + ++NT N
Sbjct: 173 ALDIYQQQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFL 232
Query: 109 EASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSS 162
+ + ++ VT +H+ R Q++ ++ + PY H L ++
Sbjct: 233 YSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-Y 291
Query: 163 IFKIKILRVLLIEYL 177
+ + R+LL Y
Sbjct: 292 LGVMYQYRLLLTLYC 306
>gi|254706642|ref|ZP_05168470.1| hypothetical protein BpinM_06564 [Brucella pinnipedialis
M163/99/10]
gi|261314102|ref|ZP_05953299.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261303128|gb|EEY06625.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 131
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S + + + + + K+ NT NA + A A+ L+VT YH
Sbjct: 2 EKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYH 61
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR ++ V +P+
Sbjct: 62 MPRAVGCFRKAGFDVT--AWPVD 82
>gi|227532864|ref|ZP_03962913.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189503|gb|EEI69570.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 314
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A + + KI ++G ++QK + +A+ I++ + NT N
Sbjct: 224 RLEIALKAAKKYSKSKILVAGGVPENKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVEN 283
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + ++T HM R FL
Sbjct: 284 ALFSVRELVDRGATSATLITSATHMRRAFL 313
>gi|154482903|ref|ZP_02025351.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
gi|149736187|gb|EDM52073.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
Length = 224
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 21/164 (12%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVH 71
+ + + + I+VL RI +L K+ +SG H
Sbjct: 36 SKRIISVDDAKDINADCIIVLGAGVKPSGKPSWMLEDRIIVGEQLYNVNAAPKLLMSGDH 95
Query: 72 HSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ D + ++ I + I + + T + A V+IV+ Y
Sbjct: 96 GRENYDEVNTMKNYAINDGIPSEDIFMDHAGFETYDSMYRAKKIF---GAKKVVIVSQKY 152
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
H+ R+ I + Y + S DL S + R L
Sbjct: 153 HLYRSL----YIAKKMGLDAYGV-SSDLRYYSKKQYYREAREWL 191
>gi|92113364|ref|YP_573292.1| hypothetical protein Csal_1238 [Chromohalobacter salexigens DSM
3043]
gi|91796454|gb|ABE58593.1| protein of unknown function DUF218 [Chromohalobacter salexigens DSM
3043]
Length = 237
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 43 LTGEPI------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI--RQDLAECCI 94
L G R+E A +LL + +SG + + + + +++A +
Sbjct: 69 LRGGGHNPYFTARMEAAAQLLRLGHVRHLLLSGDNRTRYYNEPIAMWRALRARNVASDDM 128
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Y +T + A HVL+V+ +H+PR
Sbjct: 129 TLDYAGFSTFDSVVRARRIF---GVEHVLLVSQAWHLPRALF 167
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L N + +SG SV++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N ++ K +IVT DYHM R + +R N V +P
Sbjct: 120 EENISNSNE---KFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|126642829|ref|YP_001085813.1| hypothetical protein A1S_2799 [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P+V AI+VL
Sbjct: 46 LHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGEPSAILAK 105
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L + I G+ S + + + + + + + + K+ +TE
Sbjct: 106 RLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTE 165
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
N + + E+ + + IVT D+H PR
Sbjct: 166 LNLKNSKPLLEQAHISVNQPIAIVTSDFHTPRAAA 200
>gi|33866781|ref|NP_898340.1| hypothetical protein SYNW2251 [Synechococcus sp. WH 8102]
gi|33639382|emb|CAE08766.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 191
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 58/173 (33%), Gaps = 12/173 (6%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
+ + D ++VL G+ R L Q+ + + +SG S + +
Sbjct: 28 RQALLDTAPPQQVLVLGGDVERERVGARL-ARQLDKPLLVSGG----SNPEYASWLVQEE 82
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTV 145
L + + Y+A +T N HVL+VT H+ R+ ++ + +
Sbjct: 83 GLTTDQVQLDYRARDTLSNFTSVVDDLASEGVRHVLVVTSADHLERSLAVGQVVAGSLGI 142
Query: 146 QFIPYPII-SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFF 197
P+ E S++ + + + ++ L + A
Sbjct: 143 HLTGVPVDCEPTCREESALRRWRDWLRAVA----WVVTGRDLRDAADPAPAVR 191
>gi|125973442|ref|YP_001037352.1| hypothetical protein Cthe_0925 [Clostridium thermocellum ATCC
27405]
gi|125713667|gb|ABN52159.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
Length = 215
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 13/143 (9%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHH-------SVSKDILLQKIPIRQ 87
IVVL R+ +R E+ I SG + + ++ +I +
Sbjct: 22 KSDCIVVLGSHDTRVAKRGAEIFLEGFAPLIVFSGGYGKLTKHIWNTTEAEKFARIAMDM 81
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTV 145
+ E I I K+ NT N ++ V Y RT+ +++ +
Sbjct: 82 GVPETSILIEDKSSNTGENILFVKDLINNKKIKVQKIIAVNKTYMERRTYAAFKKLWEDI 141
Query: 146 QFIPYPIISHDLEENSSIFKIKI 168
I + S +E + +
Sbjct: 142 DVI---VTSPQMELTEYLAGYRS 161
>gi|160878990|ref|YP_001557958.1| hypothetical protein Cphy_0832 [Clostridium phytofermentans ISDg]
gi|160427656|gb|ABX41219.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 251
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 25/145 (17%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIER 52
W GL + L+ GF+ V + P+ +++L RI
Sbjct: 73 WIGLSIFLLA--EGFL-----VAKSLQTPVPNADYVIIL--GAQVRGRTPSLTLNARINT 123
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A + L K SG V++ +++ I + + E I + + NT N
Sbjct: 124 AADYLLKNPNTKAICSGGQGDGEDVTEAYAIKRGLIARGVKEERILLEEHSTNTVENLTF 183
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++ + N V++VT ++H R
Sbjct: 184 SQSFIDDPN-SSVVVVTSNFHTYRA 207
>gi|54295467|ref|YP_127882.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
gi|53755299|emb|CAH16793.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
Length = 250
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 22/122 (18%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSK 76
+P+V +VVL G R+ L K+ +SG + +
Sbjct: 76 NPNVKWVVVLGGGQNIGEEMPANDLLTSASIKRLIEGVRLFRTLPDAKLLLSGGGSAGEQ 135
Query: 77 DILLQKIPIRQ--DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
L + + + + + ++NT A E +A F +VT HMPR+
Sbjct: 136 SEALLLTELAKWFAIDSEKVVVETASINTADQAHELAAIVHDQPF---YLVTSAIHMPRS 192
Query: 135 FL 136
Sbjct: 193 MA 194
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L N + +SG SV++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N ++ K +IVT DYHM R + +R N V +P
Sbjct: 120 EENISNSNE---KFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L N + +SG SV++ ++++ + + +A I+ K+ T
Sbjct: 60 QERLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRT 119
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E N ++ K +IVT DYHM R + +R N V +P
Sbjct: 120 EENISNSNE---KFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|253578294|ref|ZP_04855566.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850612|gb|EES78570.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 199
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 21/139 (15%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHHSVSKD-------------------ILLQKIPI 85
G P E+A EL + + + I SG + V+ L+ + I
Sbjct: 34 GYPQMAEKAAELFKKGMADWILPSGKYSVVNGKFSGVLEKSNVYDKEYGTEWEFLRDVLI 93
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + + I +A T NA + + + ++ YH R + Q +
Sbjct: 94 KNGVPDQKILKEDQATFTYENAIYSRQVTDHAELEIERAILCCKSYHARRCLMYYQLLYP 153
Query: 144 TVQFIPYPIISHDLEENSS 162
+F P+ + + +
Sbjct: 154 KTEFYVVPVNADGITRENW 172
>gi|146284078|ref|YP_001174231.1| transmembrane protein [Pseudomonas stutzeri A1501]
gi|145572283|gb|ABP81389.1| probable transmembrane protein [Pseudomonas stutzeri A1501]
Length = 257
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 39/171 (22%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDI 78
AIVVL R+ A L + + G+H+
Sbjct: 79 QAGAIVVLGAGREQNDPAWGGDQPGYTALERLRYAARLAKASGLPILTSGGLHYGQPPSE 138
Query: 79 -------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
L + + + ++ T NA ++ V++VT HM
Sbjct: 139 AMLGAEVLQRDFGVATRW------LEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHM 192
Query: 132 PRTFLELQRINSTVQFIPYPI----ISHDLEENSSIFKIKILR---VLLIE 175
PR+ ++ + ++ I P+ + + + + K +LL E
Sbjct: 193 PRSRWCFEQ--NGIEVIAAPVGFMGGHNARPLDGWLPESKAFWQNGLLLNE 241
>gi|301060077|ref|ZP_07200950.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445840|gb|EFK09732.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 271
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 10/104 (9%)
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR----T 134
+L+ L ++ +T A + + V+ YHM R
Sbjct: 137 VLKIKHSHPKLFGNRANLE----DTHSEVLRAKEMMDAYGLKSAIFVSSPYHMRRIKIIA 192
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ N + F+P P L+ ++ EY+K
Sbjct: 193 AKVFGQKNYDLSFVPTP--YEKTCGPLWWTDSYCLKWVMGEYVK 234
>gi|86742646|ref|YP_483046.1| hypothetical protein Francci3_3967 [Frankia sp. CcI3]
gi|86569508|gb|ABD13317.1| protein of unknown function DUF218 [Frankia sp. CcI3]
Length = 216
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPIRIERAFELLENQI 61
+ L + F + D P+ AIV+ G P R+ERA L
Sbjct: 47 WRRRAAVGILGGLTVAFAVATARLFVFPHQDAPAPVDAIVMFAGSPGRLERAVALARAGY 106
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ +S + P E I T+G ++ SA A + +H
Sbjct: 107 APVLAVS--APTEK-----DPCPGPIPGVE-VICFSPDPRTTQGESRWTSAAAARRGWHS 158
Query: 122 VLIVTHDYHMPRTFLELQR 140
+++V R L L R
Sbjct: 159 LIVVASTSQSTRARLRLAR 177
>gi|327482395|gb|AEA85705.1| transmembrane protein [Pseudomonas stutzeri DSM 4166]
Length = 257
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 32/141 (22%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDI 78
AIVVL R+ A L + + G+H+
Sbjct: 79 QAGAIVVLGAGREQNDPAWGGDQPGYTALERLRYAARLAKASGLPILTSGGLHYGQPPSE 138
Query: 79 -------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
L + + + ++ T NA ++ V++VT HM
Sbjct: 139 AMLGAEVLQRDFGVATRW------LEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHM 192
Query: 132 PRTFLELQRINSTVQFIPYPI 152
PR+ ++ + ++ I P+
Sbjct: 193 PRSRWCFEQ--NGIEVIAAPV 211
>gi|289668714|ref|ZP_06489789.1| hypothetical protein XcampmN_09524 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 253
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + + +
Sbjct: 93 YGRIVESARLYQQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 153 SMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLRRAELYFRHFGIDATPVRADWLTASWSI 212
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 213 LPQSYNFTLADVALHEYL 230
>gi|313681413|ref|YP_004059151.1| hypothetical protein Sulku_0284 [Sulfuricurvum kujiense DSM 16994]
gi|313154273|gb|ADR32951.1| protein of unknown function DUF218 [Sulfuricurvum kujiense DSM
16994]
Length = 248
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 12/147 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA--ECCIDIGYKALNTEGN 106
R+ L ++ G K+ SG S + + L I I +A +T
Sbjct: 107 RVNEGILLYKSHPGMKLIFSGYGGGDSVSNARKNSQLAIALGVNSNDIVILEEAKDTAEE 166
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A +++VT HM R ++ + + I P +E++
Sbjct: 167 AIAVKKIV---GSQPLILVTSASHMVRASSIFRK--NGICVIEAPTDFLVKKEDTLWQFP 221
Query: 167 KI--LRV---LLIEYLKILLLSIQLSL 188
LR EYL +L ++ SL
Sbjct: 222 SSGGLRRSECAFHEYLGLLWEKLKGSL 248
>gi|319790359|ref|YP_004151992.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
gi|317114861|gb|ADU97351.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
Length = 261
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 36/175 (20%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA-------------IVVLTGE-------- 46
L + F+ F + P A IVVL G
Sbjct: 36 LAFFFAALSVAFLYFFSTEFGKDLTLKPLEDAYPYPKLSSLNCTYIVVLGGGIVPHSPAA 95
Query: 47 ----PIRIERAFELLENQIGEKIF------ISGV-HHSV-SKDILLQKIPIRQDLAECCI 94
+R + A LLE ++ GV + +V S+ ++ + + I
Sbjct: 96 GGRATVRPQVAKRLLEAWKLWRVLKKPIVATGGVLYPNVESEAAVMARFLEGLGVPASQI 155
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ K+ T NA+ + +VT YHMPR+ + V +P
Sbjct: 156 KVEGKSRTTFENAEFTYRLI---GPQSICLVTSAYHMPRSVRIFKSFGFKVTPVP 207
>gi|314935744|ref|ZP_07843096.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
gi|313656309|gb|EFS20049.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
Length = 318
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIER 52
+ + + L FI ++ + H I++L R++R
Sbjct: 113 MFLWIALILFSACYAFIIYLIFSSAFERAKTHKQYDMILILGAGIFNETVTPMLASRLDR 172
Query: 53 AFELLE-NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A E+ + I +SG +S+ + ++ I+ ++ I + ++ +T N
Sbjct: 173 ALEIYKVQSHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFL 232
Query: 109 EASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ ++ N +L VT +H+ R Q++ ++ I
Sbjct: 233 YSKSFINTSFENVPSILCVTSQFHILRALRFAQKL--NIKII 272
>gi|212715681|ref|ZP_03323809.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
gi|212661048|gb|EEB21623.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
Length = 255
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 18/143 (12%)
Query: 10 VCLIFFIMGFISF----IRYVKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFE 55
+ + +G ++F V +MH P + +VVL P R+++A E
Sbjct: 75 ILIAVACIGLVAFGTVESCIVSKMHAQGKPDLDYVVVLGAQVRKSGPSLVLRYRLDKAIE 134
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L+ +SG + + + +AE I + TE N +
Sbjct: 135 YLDENPNTICIVSGGKGPNEPFPEAQGMADYLKEHGIAEQRILEESDSKTTEENIVNSKK 194
Query: 113 WAEKNNFHHVLIVTHDYHMPRTF 135
+N + ++T+++HM R
Sbjct: 195 MINDDN-ASIGVITNNFHMFRAL 216
>gi|169825776|ref|YP_001695934.1| hypothetical protein Bsph_0170 [Lysinibacillus sphaericus C3-41]
gi|168990264|gb|ACA37804.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 242
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 27/169 (15%)
Query: 3 YFWYGLFV-CLIFFIMGFISFIRYVKQMH----IPDHPSVSAIVVLTGE----------P 47
W+ LF + F + + P + I+ L
Sbjct: 27 VLWHILFFYAFLIFGYTMFLYTSVLAYAVLYHFTPIRYEPNYIIALGSGLIGDRVPPLLA 86
Query: 48 IRIERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIR-QDLAECCIDIGYKAL 101
R+ A + + GE+ FI G +VS+ ++K + D+ + + ++
Sbjct: 87 SRLNEAVKQYKK-YGERPFIIVSGGQGTDENVSEAKAMKKYLLDVHDIPANKVLMEDQST 145
Query: 102 NTEGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
NTE N +++ + + VT+++H+ R L ++ +
Sbjct: 146 NTEENMIFTKNIMDQHAQGEKYRSIF-VTNNFHVFRASLYAKKAKLDAE 193
>gi|323496573|ref|ZP_08101626.1| hypothetical protein VISI1226_13176 [Vibrio sinaloensis DSM 21326]
gi|323318319|gb|EGA71277.1| hypothetical protein VISI1226_13176 [Vibrio sinaloensis DSM 21326]
Length = 208
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGV-------HHSVSKDILLQKIP 84
+ + I VL +R+ A L KI SG + S+ ++
Sbjct: 19 ELKASECIFVLGSNDLRVAEYAATLYHQGWANKILFSGGFGRLTAGNFDRSEAETFAQVA 78
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRIN 142
+ I I KA NT N Q ++ +++N F ++V Y RT +
Sbjct: 79 RDLGVPAQDILIEDKATNTGENVQFSAELLKQHNLCFSSFILVQKPYMERRTLATFTKQW 138
Query: 143 S 143
Sbjct: 139 P 139
>gi|289661763|ref|ZP_06483344.1| hypothetical protein XcampvN_01352 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + + +
Sbjct: 93 YGRIVESARLYQQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + +++V+ H+ R L + + ++
Sbjct: 153 SMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLRRAELYFRHFGIDATPVRADWLTASWSI 212
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 213 LPQSYNFTLADVALHEYL 230
>gi|319791650|ref|YP_004153290.1| hypothetical protein Varpa_0961 [Variovorax paradoxus EPS]
gi|315594113|gb|ADU35179.1| protein of unknown function DUF218 [Variovorax paradoxus EPS]
Length = 211
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 13/153 (8%)
Query: 31 IPDHPSVSAIVV-----LTGEP-----IRIERAFELLENQIGEKIFISG-VHHSVSKDIL 79
P P+ +A+++ L G P R++ L + +++ +G V +
Sbjct: 44 PPQRPADAALILGSRAYLDGRPNPCLTGRVDTGIALAQAGRVKQLVFTGGVDKEDGRIEA 103
Query: 80 LQKIPIRQDL-AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
Q L + + +T N + + V+IV+ YH+ R +
Sbjct: 104 DVMQQHAQGLGFAGPMLQEPASTSTRLNLSLSRPLLQAAGVRSVVIVSEPYHLWRVERLV 163
Query: 139 QRINSTVQF-IPYPIISHDLEENSSIFKIKILR 170
+ F + Y + LR
Sbjct: 164 RMSGFDQTFDVQYAAAPTSCWRRWGMLFKGALR 196
>gi|116629737|ref|YP_814909.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238853386|ref|ZP_04643765.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282851809|ref|ZP_06261172.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311110620|ref|ZP_07712017.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095319|gb|ABJ60471.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238833958|gb|EEQ26216.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282557051|gb|EFB62650.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311065774|gb|EFQ46114.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 342
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 26/163 (15%)
Query: 40 IVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIR 86
IVVL RI R E+ N G KI +SG + + + + K
Sbjct: 177 IVVLGAGLIGKKVTPLLAARINRGIEVYRNNPGSKIIMSGGQGPGEEIPEAVAMAKYAEE 236
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ ++ I + K+ T N + + N IVT+ YH+ R + L + +
Sbjct: 237 KGISNQDIIVEDKSKTTRQNLAFSHKLMKSN--SRFAIVTNSYHVYRALV-LAKRM-GLD 292
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
I Y + F + + E++ L ++ +L LS
Sbjct: 293 CIGYGAKTK------WYFTLNAF---VREFIAYLTITWRLQLS 326
>gi|159902694|ref|YP_001550038.1| hypothetical protein P9211_01531 [Prochlorococcus marinus str. MIT
9211]
gi|159887870|gb|ABX08084.1| Hypothetical protein P9211_01531 [Prochlorococcus marinus str. MIT
9211]
Length = 194
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 18/140 (12%)
Query: 2 RYFWYGLFV-CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
R+ +GL + + G I + V + I+VL G+ R E L +
Sbjct: 5 RFHLFGLISGIFLIILFGTIQPLIRVSS----NTRKPQLILVLGGDLDR-----EFLGLK 55
Query: 61 IGEKI----FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
I ++ I+G + ++++ I L + Y+A +T N +
Sbjct: 56 IANRLKLPILITGGSNPEYSQWMVKEEGIDSAL----VRRDYRAKDTLSNFTSIVDDLAE 111
Query: 117 NNFHHVLIVTHDYHMPRTFL 136
+ +H+L++T +YH+ R L
Sbjct: 112 DGINHILLITSEYHIDRAML 131
>gi|146341936|ref|YP_001206984.1| hypothetical protein BRADO5071 [Bradyrhizobium sp. ORS278]
gi|146194742|emb|CAL78767.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 195
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 49 RIERAFELLENQIGEKIFISG-VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R E A L + +SG V L++ +R+ + I ++A+NT
Sbjct: 45 RAETAAGLWQQGYFRHAIVSGGVTPGAVLSECALIKAAMVRRGIPAERILEEHRAMNTGE 104
Query: 106 NAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N A + N ++ + + + R + +QR V+ + + + +
Sbjct: 105 NVLFALPVIDAALGLANVRSLICLGNSWTARRYAMTVQRHWPEVEKMLLTVDGFGVPRHL 164
Query: 162 SIFKIKILRVLLIEYLK 178
+ R +L E+ K
Sbjct: 165 WHIHPEYRRRVLHEWDK 181
>gi|302671055|ref|YP_003831015.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
gi|302395528|gb|ADL34433.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 18/159 (11%)
Query: 14 FFIMGFISFIRY----VKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFELLEN 59
+ G + F + P I+VL + P R+ A E L N
Sbjct: 88 VVVAGVLVFTICQVCILTAFFSKGAPGADYIIVLGAQMRSSGPSIIYKYRLNSAIEYLRN 147
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
K+ ++G + +S+ + + ++++E I + +L+T+ N A
Sbjct: 148 NPDTKVVVTGGQGSNEPISEGEGGKIYLMEKEISEDRIIVESTSLDTDENIVNAMKLINP 207
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + IVT+++H+ R + L R ++ + +
Sbjct: 208 DKDMTIGIVTNNFHLFRGMM-LARRHTDAEITGIAAFTE 245
>gi|71906187|ref|YP_283774.1| hypothetical protein Daro_0547 [Dechloromonas aromatica RCB]
gi|71845808|gb|AAZ45304.1| Protein of unknown function DUF218 [Dechloromonas aromatica RCB]
Length = 252
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 56 LLENQIGEKI--------FISG---VHHSVSKDILLQ-----KIPIRQDLAECCIDIGYK 99
LL + G + +SG V+ + S+ ++ + + E +
Sbjct: 105 LLRTRYGATLARRFDLPVLVSGGRPVNATRSEAEVMADILENEFKVPVRWRE------MQ 158
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+++T NA ++A +K+ +++VT +HMPR + ++ IP P
Sbjct: 159 SMDTIQNAALSAAILKKSGVRRIVLVTQAFHMPRAVRLFRAA--GLEVIPAP 208
>gi|17546687|ref|NP_520089.1| hypothetical protein RSc1968 [Ralstonia solanacearum GMI1000]
gi|17428986|emb|CAD15670.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 265
Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 34/176 (19%)
Query: 6 YGLFVCLIF-FIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
GL + LI ++ R + P P VVL G ++
Sbjct: 44 RGLGIALIAAWVAATPWCGRLLASWTHPAPPLRLDALQPQGEGAVVLLGGSRKLAAREYA 103
Query: 53 --AFELLENQIGEK--------------IFISGVHHS---VSKDILLQKIPIRQDLAECC 93
L E+ + +G V + L++++
Sbjct: 104 GQGATALSGPSLERTVYAARLARAAHLPVLATGGAPEGNGVPEAELMRRLVADMGQDARW 163
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I ++ TE NA ++ + +VTH +HM R + TV P
Sbjct: 164 I--ETRSATTEENAAFSAPMLRAAGIRRIYLVTHYWHMARARRYFEGQGFTVTPAP 217
>gi|239502384|ref|ZP_04661694.1| hypothetical protein AbauAB_08717 [Acinetobacter baumannii AB900]
Length = 261
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P+V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSAILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A + L + I G+ S + + + + +A+ + + K+ +TE
Sbjct: 125 RLNTAAPVALSQPQAKVILTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFL 136
N + + E+ + + + IVT D+H PR
Sbjct: 185 LNLKNSKPLLEQAHINANQPIAIVTSDFHTPRAAA 219
>gi|160872133|ref|ZP_02062265.1| transmembrane [Rickettsiella grylli]
gi|159120932|gb|EDP46270.1| transmembrane [Rickettsiella grylli]
Length = 282
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 65 IFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ISG ++ + Q+ + + I + ++ NT NA+ +S +K +
Sbjct: 146 ILISGGDPLNNGNTEATIYQEALLSLGINAKDIQLETQSNNTYQNAKFSSFLLKKQDSSQ 205
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+L+V + + R+ L P PI S
Sbjct: 206 LLLVNSAFTLKRSLLYFSFF----NIYPTPIASD 235
>gi|193078251|gb|ABO13211.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 261
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P+V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGEPSAILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L + I G+ S + + + + + + + + K+ +TE
Sbjct: 125 RLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
N + + E+ + + IVT D+H PR
Sbjct: 185 LNLKNSKPLLEQAHISVNQPIAIVTSDFHTPRAAA 219
>gi|262372717|ref|ZP_06065996.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312742|gb|EEY93827.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 378
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 33/184 (17%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
V+ + AIVVL G +R+E+ E+ E + I +
Sbjct: 199 NKVETKTSRNSSEPYAIVVLGGGLTLGANGKDIVVNNYTRLRLEKTLEI-EKKYDLPIVL 257
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVT 126
SGV +Q + + + +++NT N++ +S +K VL++T
Sbjct: 258 SGVE-----APYMQAWLNERGIEAK--LLEKRSMNTCENSRFSSLLLQKKGGAPTVLLIT 310
Query: 127 HDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+YHMPRT + ++ +P P+ + S R E +L +I
Sbjct: 311 DEYHMPRTRRLF--ALNGIETVPVIAPMPTQLTNWRPSEQNYDHSRRANYE----MLATI 364
Query: 185 QLSL 188
+ L
Sbjct: 365 RDML 368
>gi|237727319|ref|ZP_04557800.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434175|gb|EEO44252.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 230
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 30/114 (26%), Gaps = 12/114 (10%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL---------LQKIPIRQDLAECCIDIG 97
R+ L ++ K+ ++ + +++ + + +
Sbjct: 95 ADRLLEGIRLYKHGRIRKLVLASDGSIIESKDGKGLQGNAADMKQYLADLGMPLEDVILE 154
Query: 98 YKALNTEGNAQEASAWA-EKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFI 148
+A NT NA L++T HM R+
Sbjct: 155 TRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNPDTYIT 208
>gi|114562500|ref|YP_750013.1| hypothetical protein Sfri_1322 [Shewanella frigidimarina NCIMB 400]
gi|114333793|gb|ABI71175.1| protein of unknown function DUF218 [Shewanella frigidimarina NCIMB
400]
Length = 252
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + +SG + + ++ + + + I + +T
Sbjct: 110 RLTEGVRQFRLGQQCTLIVSGWSGGYLKTAHATIMAQAAEELGIPKASIVAFNEPKDTIE 169
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
A +VT HMPR + + P P S + ++
Sbjct: 170 EAHALQQLI---GLQPFRLVTSATHMPRAMMIFTSLG----MQPQPAPSDFIAHQGFWWR 222
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+ ++L + EY+ +L L I+
Sbjct: 223 LDADQLLASQKSIHEYVGMLWLHIK 247
>gi|213961780|ref|ZP_03390046.1| SanA protein [Capnocytophaga sputigena Capno]
gi|213955569|gb|EEB66885.1| SanA protein [Capnocytophaga sputigena Capno]
Length = 216
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + E I +SG +H ++ +++ + + E I + Y T +
Sbjct: 80 RIDAAVALYKAGKIEYILVSGDNHRNDYNEPEEMKRALMNNGIPEERIILDYAGFRTLDS 139
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + ++++ +H R + +Q I + + +
Sbjct: 140 VVRAKE---VFGYDTFIVISQRFHNERAL--FLAKHHDIQAIGF--------DAQDVTAY 186
Query: 167 KILRVLLIEYLKILLLSIQLSLSTQT 192
+ + EYL L + L Q
Sbjct: 187 YGFKTRVREYLARTKLFVDLWFEVQP 212
>gi|251793524|ref|YP_003008253.1| transporter [Aggregatibacter aphrophilus NJ8700]
gi|247534920|gb|ACS98166.1| transporter [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ I ++G ++ L+++ I + + I A +T
Sbjct: 213 QRLEKTLEIANQNPHALIIVTGGVPQNNQTEGALMKQWLIDKGIDAKRIYADNYARSTVE 272
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMP--RTFLELQRI 141
NA + K++ H ++++ H+ R E+ +
Sbjct: 273 NALFSRYSLAKHHIKHAVLISSGSHVRRGRALFEIATL 310
>gi|188588528|ref|YP_001921214.1| GdmH [Clostridium botulinum E3 str. Alaska E43]
gi|188498809|gb|ACD51945.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 253
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 22/147 (14%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFEL 56
F+C+ + F + + + + IVVL R++ A +
Sbjct: 66 FFICIGLVL--FFAIEVVIISCPKSNKENTDYIVVLGAGLNNGDQLSYILKSRLDSALQC 123
Query: 57 LEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ + I +SG +S+ + ++K + Q ++E I + ++ NT N + +
Sbjct: 124 INKFKNNSYIIVSGGKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKK 183
Query: 113 WAEKNNFH-----HVLIVTHDYHMPRT 134
E+ + V IVT D+H R+
Sbjct: 184 LIEEQSNKNIDDLSVKIVTTDFHGFRS 210
>gi|269216159|ref|ZP_06160013.1| putative SanA protein [Slackia exigua ATCC 700122]
gi|269130418|gb|EEZ61496.1| putative SanA protein [Slackia exigua ATCC 700122]
Length = 228
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 25/155 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-----SVSAIVVL------TGE----- 46
F LF L+ + I ++ ++ IVVL G
Sbjct: 26 VFTLALFGALVVAGLNGIVLLQAHDRVSTLAEAESEGLKADCIVVLGASVLSDGSLSPIL 85
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL E+ I +SG + + D +++ + + + E I +T
Sbjct: 86 AHRVDAAVELYESGAAPVIVMSGDGRASNYDEPLHMKEYAMSKGVPESAIVCDEGGYHTF 145
Query: 105 GNAQEASAW--AEKNNFHHVLIVTHDYHMPRTFLE 137
S W A + VT +YH+ R +
Sbjct: 146 D-----SMWRCAHVYGASSAIAVTQEYHLSRAVFD 175
>gi|302037993|ref|YP_003798315.1| hypothetical protein NIDE2684 [Candidatus Nitrospira defluvii]
gi|300606057|emb|CBK42390.1| protein of unknown function DUF218 [Candidatus Nitrospira defluvii]
Length = 215
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 12/112 (10%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ + + + + +V L G P R A L+ + + + + +
Sbjct: 43 VAHAEGVPPTEVGKADVVVALAGSPDRTVYAQTLVAQGLAPDSMSTLLDPFCLRAQGSR- 101
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
C NT A + F V++VT YH+ R
Sbjct: 102 --------SACAT---AVRNTIDEAVALRRIFARERFTKVIVVTSRYHLARA 142
>gi|226954131|ref|ZP_03824595.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226835172|gb|EEH67555.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 373
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 33/175 (18%)
Query: 33 DHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVHHSVSK 76
D AIVVL G +R+ER E+ E Q I +SGV
Sbjct: 203 DTNQPYAIVVLGGGLTLGANGKDIVVNNYTRLRLERTLEV-EKQYNLPIVLSGVE----- 256
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDYHMPRTF 135
+Q + + + +++NT N + +S +K V+ +T +YHMPRT
Sbjct: 257 APYMQAWLEERGIKAK--LLENRSMNTCENTRFSSLLLQKKGGAPKVIFITDEYHMPRTR 314
Query: 136 LELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ +P P+ + S R E LL +I+ L
Sbjct: 315 RLF--ALNGIETVPVVAPMPTKLTSWRPSEKNYDHSRRANYE----LLATIRDVL 363
>gi|170726169|ref|YP_001760195.1| hypothetical protein Swoo_1816 [Shewanella woodyi ATCC 51908]
gi|169811516|gb|ACA86100.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 166
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 19/140 (13%)
Query: 39 AIVVLTGEPI------------RIERAFELLENQIGEKIFISGV-----HHSVSK-DILL 80
AIVVL G P R + A+ + KI +G + + + L
Sbjct: 4 AIVVL-GAPNDSDGNLSVMALSRCDLAYTYFSQKNHLKIICTGGVGAHFNTTSTPHAQYL 62
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + + + + ++ T +A A E++ ++IVT ++H+PR L
Sbjct: 63 KNYLMSKGVPQINFLPLVESRFTFEDALLAREVIEEHKITSLVIVTSEFHLPRAKLVFST 122
Query: 141 INSTVQFIPYPIISHDLEEN 160
I + F + ++
Sbjct: 123 IFPQITFHYLAATTPLSDDE 142
>gi|224825882|ref|ZP_03698986.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
gi|224602106|gb|EEG08285.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
Length = 267
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 32/179 (17%)
Query: 35 PSVSAIVVLTGEP------IR----IERAFEL-----LENQIGEKIFISGVHHSVSKDI- 78
AIVVL G R + L L G + +SG +
Sbjct: 82 RETGAIVVLGGGKKPAPEYGRNEPSADTLMRLRYAAYLARHSGRPVLVSGGAPLGGEAEA 141
Query: 79 ------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
L+ ++ E D T NA+ ++ + + + +V+ +H+
Sbjct: 142 PVMARTLVSDYGVQPRWVEQGSD------TTFDNARLSAQLLKADGVRSITLVSQGWHLA 195
Query: 133 RTFLELQRINSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
R + V P ++ +D + S ++ L E++ L +++
Sbjct: 196 RAVPLFEEQGLKVLPAPTGLVRYDGGGVMWYLPSGRAMQETHAALREWVGRLYYAVRER 254
>gi|256826645|ref|YP_003150604.1| hypothetical protein Ccur_01910 [Cryptobacterium curtum DSM 15641]
gi|256582788|gb|ACU93922.1| uncharacterized membrane protein [Cryptobacterium curtum DSM 15641]
Length = 229
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 22/135 (16%)
Query: 22 FIRYVKQMHIPDH-----PSVSAIVVL------TGEPI-----RIERAFELLENQIGEKI 65
F + D + I+VL G+P R++ A L + KI
Sbjct: 35 FATQQSNVKPSDEIASSRKTYDCILVLGASMLPNGQPSTVLKDRLDVAVNLYRKGVAPKI 94
Query: 66 FISGVHHSV-SKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+SG S D + ++K + Q + I + +NT + + + N +
Sbjct: 95 VMSGDDSRALSYDEVTNMKKYAVEQGIPSEDIFCDHAGINTYD-SMYRARYV--FNVESM 151
Query: 123 LIVTHDYHMPRTFLE 137
++VT YH R +
Sbjct: 152 VVVTQTYHQYRALFD 166
>gi|261252482|ref|ZP_05945055.1| hypothetical protein VIA_002504 [Vibrio orientalis CIP 102891]
gi|260935873|gb|EEX91862.1| hypothetical protein VIA_002504 [Vibrio orientalis CIP 102891]
Length = 211
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 24/185 (12%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-VHH------SVSKDILLQKIPIRQ 87
I VL IR+ E A L + + SG V S+ I
Sbjct: 25 KSDCIFVLGSNDIRVAEHAANLYLQGWADWLIFSGGVGRLTQGTFETSEAETFAAIAQTM 84
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR----- 140
+ I I +A NT N + ++ + ++V Y RT ++
Sbjct: 85 GVPHHAIIIENQATNTGENVRFTHQLLKERSIDVSSFILVQKPYMERRTLATFEKQWPSP 144
Query: 141 ------INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+ + F Y + +++ ++I + + EY K L + ++
Sbjct: 145 YQLACVTSPKLSFCDY--FNDEIDIETTITAMLGDFQRIKEYPK-LGFQTEQAIPQSVEE 201
Query: 195 QFFIT 199
+
Sbjct: 202 SYRAV 206
>gi|148927862|ref|ZP_01811280.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147886790|gb|EDK72342.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 218
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 17/139 (12%)
Query: 41 VVLTGEPI--RIER-AFELLENQIGEKIFISGVHHSVSKD-------ILLQKIPIRQDLA 90
VV T R+ + EL G + ISG +SKD L I I +
Sbjct: 28 VVFTLGSSDRRVAVYSAELFLKGYGNYLVISGGFGRISKDRFHKTEAELFADIAIGMGVP 87
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR--INSTVQ 146
+ + KA NT N + + +L+V Y RT ++ +S V+
Sbjct: 88 PEKVILETKASNTGENIRFTYNLLMQRGLRPKSLLLVHKPYMERRTLATFKKQWQDSNVE 147
Query: 147 FIPYPIISHDLEENSSIFK 165
+ S D+
Sbjct: 148 IF---VTSPDIAYEDYFTD 163
>gi|313904234|ref|ZP_07837613.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
gi|313471036|gb|EFR66359.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
Length = 242
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 23/144 (15%)
Query: 11 CLIFFIMGFISFIRY----VKQMHIPDHPSVSAIVVLTGEPI------------RIERAF 54
L+ +G I F + H P + IVVL R++ A
Sbjct: 62 ILVLVALGAIIFAVIEGCILSGFHQKGKPGLKYIVVL--GAQVFETRPSRVLRYRLDTAV 119
Query: 55 ELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ L+ +SG + ++ + + ++ I K+ T N +
Sbjct: 120 DYLKENPETICIVSGGQGANEPRPEADVMAEYLEKAGISSERILKERKSETTTQNISFSR 179
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
++ V +VT+++H+ R
Sbjct: 180 KLMKEEG--SVAVVTNNFHVFRAL 201
>gi|300925402|ref|ZP_07141287.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|301326634|ref|ZP_07219964.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|300418472|gb|EFK01783.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|300846679|gb|EFK74439.1| conserved hypothetical protein [Escherichia coli MS 78-1]
Length = 259
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 27/187 (14%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-IKILRVLLIEYLKI-LLLSIQLSLS 189
PR + Q+ P ++ D N + ++ + + L I+ L
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIRQWLK 250
Query: 190 TQTASQF 196
+
Sbjct: 251 GPSGEPR 257
>gi|119962310|ref|YP_949744.1| hypothetical protein AAur_4076 [Arthrobacter aurescens TC1]
gi|119949169|gb|ABM08080.1| putative integral membrane protein with DUF218 domain [Arthrobacter
aurescens TC1]
Length = 336
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 18/163 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGE----------PIRIERAF 54
F+C + F+ F+ Y P+ +A++VL R+ +A
Sbjct: 126 LAFFLCS-YLGCAFVVFLGYAVVYSKMRFSPNPAAVIVLGSGLIDGKVPPLLAARLNKAL 184
Query: 55 ELLENQI-GEKIFI-SGV-HHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+ + + + + SG + ++ + + A + +A T N
Sbjct: 185 EIYDGGTPAKPVLVPSGGQGPDEPRPESTAMKDYLVAKGAAAKDVLEENQATTTRENLAY 244
Query: 110 ASAWAEKNNFHHVLIV-THDYHMPRTFLELQRINSTVQFIPYP 151
+ A L+V T++YH+ R L +R + + P
Sbjct: 245 SVALLADKGIQGPLLVCTNNYHVLRAALLSRRQKINAEVVGAP 287
>gi|116052024|ref|YP_789133.1| hypothetical protein PA14_12270 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587245|gb|ABJ13260.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 253
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 32/141 (22%)
Query: 36 SVSAIVVL-----TGEPIRIERAFELLEN---QIGEKI--------FISGVHHSVSK--- 76
AIV+L T +P + A LL + ++ ISG H
Sbjct: 79 RADAIVILGVGRQTNDPAWGDDAPSLLAAERLRYAARLAKTSALPVLISGGLHYGRPPSE 138
Query: 77 -----DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ LLQ + E + T NA ++ + V++VT +HM
Sbjct: 139 AALMANALLQDFGVPTRWQEG------LSRTTWENATLSAPQLREAGVRRVVLVTQAWHM 192
Query: 132 PRTFLELQRINSTVQFIPYPI 152
R +R + IP P+
Sbjct: 193 QRARWSFER--QGFEVIPAPV 211
>gi|229016285|ref|ZP_04173233.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
gi|229022523|ref|ZP_04179055.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228738776|gb|EEL89240.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228745056|gb|EEL95110.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
Length = 332
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 17/148 (11%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMH-IPDHPSVSAIVVLTGE-----------PIRIE 51
++ + + ++F F+S++ Y H I I+VL R++
Sbjct: 128 YYVTVVLLFLYFAYIFMSYLTYAVLYHFIKVKYIPDFIIVLGSGLIGGDRVPPLLASRLD 187
Query: 52 RAFELL-ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ + ++ KI +SG VS+ ++K + + + E + K+ NT N
Sbjct: 188 KGMDEYIKSGRIPKIIVSGGQGPDELVSEAAAMKKYLVEKGMNEKDVLTEDKSRNTLQNM 247
Query: 108 QEASAWAEK-NNFHHVLIVTHDYHMPRT 134
+ + H + VT++YH+ R
Sbjct: 248 LFSKKIMDTIKTDHKSIFVTNNYHVFRA 275
>gi|187933235|ref|YP_001885962.1| hypothetical protein CLL_A1769 [Clostridium botulinum B str. Eklund
17B]
gi|187721388|gb|ACD22609.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 253
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFEL 56
F+C+ + FI+ + + + IVVL R++ A +
Sbjct: 66 FFICIGIVL--FIAVEIVIISCPKSNKENTDYIVVLGAGLNNGDQLSYILKSRLDSALQC 123
Query: 57 LEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ I +SG +S+ + ++K + Q ++E I + K+ NT N + +
Sbjct: 124 INEFNNNSYIVVSGGKGNDERISEAMAMKKYLLEQGISEDEILMEDKSKNTFENFKYSKK 183
Query: 113 WAEKNNFH-----HVLIVTHDYHMPRT 134
E+++ V IVT D+H R+
Sbjct: 184 IIEEHSNKNIDDLSVKIVTTDFHGFRS 210
>gi|307721211|ref|YP_003892351.1| hypothetical protein Saut_1291 [Sulfurimonas autotrophica DSM
16294]
gi|306979304|gb|ADN09339.1| protein of unknown function DUF218 [Sulfurimonas autotrophica DSM
16294]
Length = 248
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 12/148 (8%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--CIDIGYKALN 102
G R+ + + G KI +G + + L + I K +
Sbjct: 105 GGTKRVLEGVIIHKRMPGSKIIFTGYEGKTDTPNAVMNAKLANALGIKYEDMIINGKPTD 164
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T+ A ++VT HMPR + + + IP P + E
Sbjct: 165 TKEEALFTKTLV---GNESFILVTSATHMPRAMMLFTSL--GMHPIPAPTNYYKSEFRGY 219
Query: 163 IFKIK-----ILRVLLIEYLKILLLSIQ 185
+ I + + EYL IL ++
Sbjct: 220 LRAPDPGCFFISSIAIHEYLGILWAKLK 247
>gi|31616142|gb|AAP55236.1| unknown [Staphylococcus aureus]
Length = 204
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + + I +SG ++ +++K + + E I ++ +T N
Sbjct: 66 RLNTCLKAKKKNEKSYIIVSGGRPVNGKTQANVMKKWLKQHSVKEEFIITEQESEDTLEN 125
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
A E A++ + + I+T+ H R L ++++
Sbjct: 126 AIETLKLADRRGINTLSIITNGSHARRATLIFKKLDKN 163
>gi|254451471|ref|ZP_05064908.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198265877|gb|EDY90147.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 201
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 33/186 (17%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELL 57
+ ++ + F+ + + S AIV + G + R+ER +L
Sbjct: 3 LSMLAWT--FLW-----PEPDVRALQSADAIVCM-GGSMSADGTLAASTLTRVERCVQLF 54
Query: 58 ENQIGEKIFISG-VHHSVSKDILLQKIPIRQDL--AECCIDIGYKALNTEGNAQEASAWA 114
E + I SG + Q L + + A +T NA +
Sbjct: 55 EAGLAPVIIFSGGIARPTGPSAGAQMGRFAMTLGVPQDGVIAEGLAQSTLQNALFSLPLI 114
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRI-----NSTVQFIPYPIISHDLEENSSIFKIKIL 169
N ++IVT +H+PR++ + + F ++S D+ N ++
Sbjct: 115 P--NAERIIIVTEAFHLPRSWASFRWAQWELGHPATSFTL--VMSEDVRRNPLTGDVR-W 169
Query: 170 RVLLIE 175
+L+ E
Sbjct: 170 NMLVRE 175
>gi|168209439|ref|ZP_02635064.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|168212314|ref|ZP_02637939.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170712354|gb|EDT24536.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170716134|gb|EDT28316.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 199
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTF 135
+++ R D+ I + K+ NT NA + + N ++ +H R
Sbjct: 81 EFCKEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRAL 140
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIF-KIKILRVL---------LIEYLKIL 180
+ QF P+ + + +++ I RVL EY+K L
Sbjct: 141 ITYSLAYPNTQFYVVPVETQGISKDNWHKSDYGINRVLGELRKCGSYFEEYIKDL 195
>gi|256005338|ref|ZP_05430303.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|281417642|ref|ZP_06248662.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|255990657|gb|EEU00774.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|281409044|gb|EFB39302.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|316940321|gb|ADU74355.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 215
Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 13/143 (9%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHH-------SVSKDILLQKIPIRQ 87
IVVL R+ +R E+ I SG + + ++ +I +
Sbjct: 22 KSDCIVVLGSHDTRVAKRGAEIFLEGFAPLIVFSGGYGKLTKHIWNTTEAEKFARIAMDM 81
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTV 145
+ E I I K+ NT N ++ V Y RT+ +++ +
Sbjct: 82 GVPETSILIEDKSSNTGENILFVKDLINNKKIKVQKIIAVNKPYMERRTYAAFKKLWEDI 141
Query: 146 QFIPYPIISHDLEENSSIFKIKI 168
I + S +E + +
Sbjct: 142 DVI---VTSPQMELTEYLAGYRS 161
>gi|320156601|ref|YP_004188980.1| SanA protein [Vibrio vulnificus MO6-24/O]
gi|319931913|gb|ADV86777.1| SanA protein [Vibrio vulnificus MO6-24/O]
Length = 205
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL + + +SG H S ++ +++ ++ + E I + Y T
Sbjct: 39 HRIDAAIELYRQNKVQHLLLSGDNAHRSYNEPWTMKRDLLKAGVPETNIHLDYAGFRTLD 98
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A ++F LIVT +H R
Sbjct: 99 SIVRAKKIFASDHF---LIVTQRFHCERALF 126
>gi|148256823|ref|YP_001241408.1| hypothetical protein BBta_5542 [Bradyrhizobium sp. BTAi1]
gi|146408996|gb|ABQ37502.1| hypothetical protein BBta_5542 [Bradyrhizobium sp. BTAi1]
Length = 195
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 7/137 (5%)
Query: 49 RIERAFELLENQIGEKIFISG-VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R A L E +SG V L++ +R+ + I + A+NT
Sbjct: 45 RAATAARLWEQGYFRHAIVSGGVTPGAEASECALIKDAMVRRGVPADRILEEHHAMNTGE 104
Query: 106 NAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + N V+ + + + R + LQR V+ + + S +
Sbjct: 105 NVLLSLPVIDTALGLANVRTVICLGNSWTARRYAMTLQRHWPEVEKMLLTVDSFGVPRQL 164
Query: 162 SIFKIKILRVLLIEYLK 178
+ R +L E+ K
Sbjct: 165 WHTHPEFRRRVLSEWDK 181
>gi|318040912|ref|ZP_07972868.1| hypothetical protein SCB01_04359 [Synechococcus sp. CB0101]
Length = 232
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-VLTGEPIRIE-----RAFELLENQI 61
+ + +++ +G + +++ P P+ S V VL G +I A L+ +
Sbjct: 59 VLIAVLYSPIGTTALSAWLQGQLPPSVPAASQPVAVLLGRGPQIAAATTAEASRLVRDHA 118
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+++SG + + LQ+ + L A T NA + W +++
Sbjct: 119 AVAVYVSG--DAFAAAQALQRQGVPAPLIAG----DSCARTTWENATRTATWLRRHHPGA 172
Query: 122 -VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
V ++T + +PR +R + +P + + + + R+ L E L
Sbjct: 173 PVALITDPWQLPRATAAFRR--QDLVVMPIAV-------DPLLSAGQRNRLALRETAATL 223
Query: 181 LLSIQLSL 188
L +Q L
Sbjct: 224 LYGLQGRL 231
>gi|331082614|ref|ZP_08331737.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400233|gb|EGG79875.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 250
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 24/135 (17%)
Query: 22 FIRYV--KQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEKIFI 67
F Y+ M + ++ IVVL RI+RA + L K +
Sbjct: 74 FTEYLIISAMKQKEVRNLDYIVVL--GAQVNGKIPSKSLQYRIDRAEKYLRENENTKAVL 131
Query: 68 SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE---KNNFHH 121
SG +S+ + + +R+ +A + + K+ NTE N + K N
Sbjct: 132 SGGKGEDEGISEAQCMAEELVRKGVASKRLLLEAKSRNTEQNIAFTIPIIQQDSKKNLKE 191
Query: 122 VLI--VTHDYHMPRT 134
+ I VT+ +H+ R+
Sbjct: 192 LKIGIVTNGFHIYRS 206
>gi|228474816|ref|ZP_04059547.1| putative membrane protein [Staphylococcus hominis SK119]
gi|228271479|gb|EEK12847.1| putative membrane protein [Staphylococcus hominis SK119]
Length = 318
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 17/155 (10%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIER 52
+ + + L FI ++ + H I++L R++R
Sbjct: 113 MFLWIALILFSACYAFIIYLIFSSAFERAKTHKQYDMILILGAGIFNETVTPMLASRLDR 172
Query: 53 AFELLE-NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A E+ + I +SG +S+ + ++ I+ ++ I + ++ +T N
Sbjct: 173 ALEIYKVQSHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFL 232
Query: 109 EASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRI 141
+ ++ N +L VT +H+ R Q++
Sbjct: 233 YSKSFINTSFENVPSILCVTSQFHILRALRFAQKL 267
>gi|83717478|ref|YP_438905.1| hypothetical protein BTH_II0706 [Burkholderia thailandensis E264]
gi|167577281|ref|ZP_02370155.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|167615420|ref|ZP_02384055.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
gi|257141992|ref|ZP_05590254.1| hypothetical protein BthaA_22676 [Burkholderia thailandensis E264]
gi|83651303|gb|ABC35367.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 255
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 9/106 (8%)
Query: 44 TGEPIRIERAFELLE------NQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
T R+ A L G KI +SG + + + + I + +
Sbjct: 90 TFSYSRVVEAASLYRDCRRARANAGCKILVSGGDARRNGAPEASIYRDALIGLGVDAADV 149
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+++NT NAQ A + VL+VT H+ R+ L
Sbjct: 150 LSEPRSMNTWQNAQFTRAVLDGYRADRVLLVTSGVHLRRSALYFAH 195
>gi|288921303|ref|ZP_06415585.1| hypothetical protein FrEUN1fDRAFT_5283 [Frankia sp. EUN1f]
gi|288347277|gb|EFC81572.1| hypothetical protein FrEUN1fDRAFT_5283 [Frankia sp. EUN1f]
Length = 196
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS--GVHHSVSKDILLQKIPIR 86
I D V AI +L G R+++ +L + I + IS G + + +++ I
Sbjct: 52 PKIDDPRPVDAIFMLGGPGHRLDKTIDLARSGIAPVVVISLPGTNRCPDTARIGREVEII 111
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ T+G AQEA A + ++ +L VT R L + R
Sbjct: 112 CFWPD--------PRTTQGEAQEAGRLARERGWNSILFVTDRSQDSRARLRIGRCYDGEV 163
Query: 147 FIPYPIISHDLEENSSIFKIKIL 169
+ ++ L + +F ++
Sbjct: 164 LV--DVVETPLRDWPYLFAYQVA 184
>gi|239638178|ref|ZP_04679130.1| putative membrane protein [Staphylococcus warneri L37603]
gi|239596199|gb|EEQ78744.1| putative membrane protein [Staphylococcus warneri L37603]
Length = 320
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHP----SVSAIVVLTGE----------PIRIE 51
L++CLI F +F+ Y+ + SV I+VL R+
Sbjct: 113 IALWLCLIGFTT-LFAFLCYLIWSSVFGSRHFNQSVDLIIVLGAGIFTEEVTPMLKERLN 171
Query: 52 RAFELLE-NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
RA E+ ++ ++ +SG + + I +Q+ I+Q + I + ++ NT N
Sbjct: 172 RALEIYHHSEHKPQLLVSGGQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNF 231
Query: 108 QEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + NN ++ VT +H+ R ++ + Y + SH
Sbjct: 232 VYSKEIILQYFNNMPKMVCVTSQFHILRAL----KLAQNLDIPTYGVGSH 277
>gi|332708432|ref|ZP_08428409.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
gi|332352835|gb|EGJ32398.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
Length = 195
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L++ L+ + FIS I + P+ AI+VL R + + + I++
Sbjct: 13 LWLVLLPMGLFFISIIPLRLAIARHQEPAPQAILVLGSNKDRFKFTAQFSHSHPELDIWV 72
Query: 68 SGVHHS-VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S + + + +K+ I + I + +T N + + + H+ +VT
Sbjct: 73 SDYYSNFERNRQIFRKVGIS----DQRIHYDFCPTDTVTNFTCTVNYFYRQDIQHIYLVT 128
Query: 127 HDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIF 164
DYHM R+ + + F P + S + S I
Sbjct: 129 SDYHMVRSRAIATFVFGSRGITFTPVSVPSKGYPKESKIR 168
>gi|269139507|ref|YP_003296208.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|267985168|gb|ACY84997.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|304559396|gb|ADM42060.1| Membrane Protein [Edwardsiella tarda FL6-60]
Length = 265
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 52/190 (27%), Gaps = 32/190 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
+ W G+ + + + + + + +VVL G
Sbjct: 45 FAWLGILLLSMQPLADRLLAPLEDRYPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGN 104
Query: 49 ---RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L ++ ++G + S ++ + + I +
Sbjct: 105 SLPRVTEGIRQLALNPQARLIVTGAAAQGNPVSSAEVAARVARSLGVDEQRIIVLDSP-R 163
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-----IISHD 156
+T AQ + +++VT HMPR + IP P I S
Sbjct: 164 DTGQEAQAVADVV---GNAPLILVTSANHMPRALGFFHH--QGLDPIPAPANQLAIASPL 218
Query: 157 LEENSSIFKI 166
+
Sbjct: 219 NPWERWLPSP 228
>gi|238898866|ref|YP_002924548.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466626|gb|ACQ68400.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 249
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 13/155 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A +L ++ + + +SG + S ++ +++ I + I + Y T +
Sbjct: 69 RLQGALQLYKSGKIKYLLLSGDNAQPSYNEPRTMKRDFIASGVFPQDIILDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK- 165
NNF +I+T +H R + +Q Y + S + + +
Sbjct: 129 IVRTHKVFNTNNF---IIITQRFHCERAL--FIALYFGIQAACYAVPSPKKMLLTRLREV 183
Query: 166 IKILRVLLIEYL-----KILLLSIQLSLSTQTASQ 195
+ + ++ Y+ + L I+++ ++ T +
Sbjct: 184 LARINLITDLYIFDRQPRFLGPLIRITTTSDTTKK 218
>gi|302551238|ref|ZP_07303580.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302468856|gb|EFL31949.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 228
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 50/175 (28%), Gaps = 20/175 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGE----------PIRI 50
R + C++ + ++ ++ P VV R+
Sbjct: 20 RLVQAVMGACVLALLPAAWMYVVAGDRLRTAAEVPRTDVAVVFGAGLWDGEPSPYLAHRL 79
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L E + ++G + D ++ R + + I Y +T +
Sbjct: 80 DAAAGLYREGRVEVVLVTGDNSREDYDEPDAMRAYLTRHGVPDRRIVSDYAGFDTWDSCV 139
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
A ++++ +H+ R Q Y + + + +
Sbjct: 140 RAKKIF---GVDEAVLISQGFHIRRAVALCQAAG----VESYGVGVDAVHDATWY 187
>gi|296138203|ref|YP_003645446.1| hypothetical protein Tpau_0466 [Tsukamurella paurometabola DSM
20162]
gi|296026337|gb|ADG77107.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 183
Score = 49.1 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 14/133 (10%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R+E A L ++I +SG + +S D + + + + + + + AL+T
Sbjct: 49 EGRLEAALRLYRIGKVQRILVSGNANGLSGDEIEVMTRWLRERGVPDEALLTDGAALDTY 108
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A + VL+V+ +H R + + + + + +
Sbjct: 109 LSCVHARD---RFGIDRVLLVSQFFHARRAVVLARHLGLD----ADAVRAEAGCSRRAW- 160
Query: 165 KIKILRVLLIEYL 177
+R L EYL
Sbjct: 161 ----VRNLAREYL 169
>gi|156974318|ref|YP_001445225.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
gi|156525912|gb|ABU70998.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
Length = 244
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 22/152 (14%)
Query: 1 MRYFWYGLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVL-----------TGE 46
+ GL V +I +++ + +P+H VVL T
Sbjct: 23 LSISLLGLLVTVIAIDRWVVLQAQEEIFTDYEQVPEHEVA---VVLGTSKYIGKILNTYY 79
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI A EL + ++ +SG H S ++ +++ +R + E I + Y T
Sbjct: 80 THRINAAIELYKQGKVKQFLLSGDNAHRSYNEPWTMKRDLLRAGVPEEVIHLDYAGFRTL 139
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 140 DSIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|284990206|ref|YP_003408760.1| hypothetical protein Gobs_1673 [Geodermatophilus obscurus DSM
43160]
gi|284063451|gb|ADB74389.1| protein of unknown function DUF218 [Geodermatophilus obscurus DSM
43160]
Length = 209
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 21/171 (12%)
Query: 28 QMHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHS 73
P+ AIVVL G R+E A L E + + G
Sbjct: 34 TARQDAQPASDAIVVL-GSAQYNGVPSSIFEARLEHALALYEEGVAPVVVTVGGKADGDQ 92
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
++ + + E + + ++T + + A ++ + ++VT +H R
Sbjct: 93 FTEAESGRAYLTEAGIPEDALLAVEEGVDTLESMRAVGAAFDERGWSSAVLVTDPWHAMR 152
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+R+ S + + + R +L E LL
Sbjct: 153 A----ERMAEDAGITAD--SSPTRQGPAVQTRATQFRYILRETAAYLLYRA 197
>gi|319950302|ref|ZP_08024221.1| integral membrane protein [Dietzia cinnamea P4]
gi|319435994|gb|EFV91195.1| integral membrane protein [Dietzia cinnamea P4]
Length = 210
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 14/143 (9%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRIERAFELLENQ 60
L+ F M + + IV+L G R+ + L +
Sbjct: 55 LLPLCGDFEVLTSDDPAMLTINPFTTD-IVILGAGLFPDGGIRPVLEERLRTGYRLAQEY 113
Query: 61 IGEKIFISGVHHSVSKDILLQK--IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+I ++G + ++ I + +T NAQ
Sbjct: 114 PTARIIVTGGVPQNGRTEARAMGDWLRGAGISPLRITEEGSSNSTVQNAQFTDRIFRDRG 173
Query: 119 FHHVLIVTHDYHMPRTFLELQRI 141
++VT H+ R L ++
Sbjct: 174 TTGAVVVTTGDHVKRAVLNFRQA 196
>gi|73661853|ref|YP_300634.1| hypothetical protein SSP0544 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494368|dbj|BAE17689.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 323
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 15/118 (12%)
Query: 33 DHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDIL 79
+ P I+VL R++RA L Q K +SG +S+ +
Sbjct: 142 NKPDFDVILVLGAGIFTENVTPMLASRLDRALTLYVQQPNAKFIVSGGQGPDEPISEALA 201
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTF 135
+++ I + I + ++ +T N Q + + E + ++ VT +H+ R
Sbjct: 202 MKRYLIHHGVESNHIMLEDQSTSTSENIQFSKSLIESHFECVPKIVCVTSQFHIMRAL 259
>gi|290559808|gb|EFD93132.1| hypothetical protein BJBARM5_0144 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 29/125 (23%)
Query: 39 AIVVLTGEP-----IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
AIVVL G R+E+ EL + Q + I+G + + D L+ + +D
Sbjct: 13 AIVVL-GGSCDRFKKRLEKGIELQKQQKEALLLIAGQNIHSN-DDLMNMLSGNEDFI--- 67
Query: 94 IDIGYKALNTEGNAQEASAWAEK-----------------NNFHHVLIVTHDYHMPRTFL 136
+++NT NA+ A + V IVT HM R
Sbjct: 68 --YENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYNGGVRDVYIVTDTLHMIRAKR 125
Query: 137 ELQRI 141
+R
Sbjct: 126 YFKRT 130
>gi|290558827|gb|EFD92220.1| protein of unknown function DUF218 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 29/125 (23%)
Query: 39 AIVVLTGEP-----IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
AIVVL G R+E+ EL + Q + I+G + + D L+ + +D
Sbjct: 13 AIVVL-GGSCDRFKKRLEKGIELQKQQKEALLLIAGQNIHSN-DDLMNMLSGNEDFI--- 67
Query: 94 IDIGYKALNTEGNAQEASAWAEK-----------------NNFHHVLIVTHDYHMPRTFL 136
+++NT NA+ A + V IVT HM R
Sbjct: 68 --YENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYNGGVRDVYIVTDTLHMIRAKR 125
Query: 137 ELQRI 141
+R
Sbjct: 126 YFKRT 130
>gi|163801101|ref|ZP_02195001.1| SanA protein [Vibrio sp. AND4]
gi|159175450|gb|EDP60247.1| SanA protein [Vibrio sp. AND4]
Length = 244
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI A EL + + +SG H S ++ +++ ++ + E I + Y T
Sbjct: 80 SHRINAAIELYKKGKVRQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEDVIHLDYAGFRTL 139
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 140 DSIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|86740280|ref|YP_480680.1| hypothetical protein Francci3_1575 [Frankia sp. CcI3]
gi|86567142|gb|ABD10951.1| protein of unknown function DUF218 [Frankia sp. CcI3]
Length = 232
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ + F+ GF + + D P AIV+L G R +A EL +
Sbjct: 66 LIVMLFAVFLAGFTALTLRLFVFPAADVPVQADAIVMLAGPGDRTGKAIELARTGYAPVL 125
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+S + + I + T G A+ A+ A ++ + +L V
Sbjct: 126 VMS--TPGT------RGCSAHEAPKAEVICFSPHPVTTRGEARAAAELAARHGWTRILFV 177
Query: 126 THDYHMPRTFLELQRINST 144
T R + + R
Sbjct: 178 TGRAQDTRARIRISRCFHG 196
>gi|315221464|ref|ZP_07863385.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
gi|315189583|gb|EFU23277.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
Length = 333
Score = 48.7 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 29/203 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
YG ++ + + + GF+ + P I++L R+E+
Sbjct: 134 LLIYGSYLYVTYILYGFVYNVL-------PVIKHPDYIIILGSGLIGDKVPPLLAQRLEK 186
Query: 53 AFELLEN-QIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ E KI +SG V +++ + + + + + I I ++ NT N +
Sbjct: 187 GKTMYEKFHNHPKIVVSGGQGVDEPITEAEAMAQYLRQVGIPQEDIIIERQSTNTLENLR 246
Query: 109 EASAWA---EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + N+ + +VT+ +H R + +++I + I + L S I +
Sbjct: 247 FSKAILDETREKNYRCL-VVTNSFHSLRAGIYMRKIGLKGRSIGSRTAPYFLPS-SWIRE 304
Query: 166 IKILRVLLIEYLKILLLSIQLSL 188
L VL Y K + + L
Sbjct: 305 TLGLIVL---YWKWHAIFLGLYF 324
>gi|254481013|ref|ZP_05094259.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038808|gb|EEB79469.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 198
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 8/147 (5%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI-LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ L + ++ + V S + + + + + + + + NT +
Sbjct: 54 SRLRAGLSLYDAGFVSQLLL--VDGKKSAWEHIQKNLCLDCAIDGKDVRVLEGSTNTLSD 111
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-----EENS 161
A+ + +N +LI+T YH R L S Q + S D E
Sbjct: 112 AELVEQFCLENRVSSLLIITDPYHTRRASLIFHSRISLSQVNILVVSSGDYANYMSPEEL 171
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSL 188
L+V+L E KI + ++ +
Sbjct: 172 WWTDESTLQVVLAETSKIAFMFLKRWV 198
>gi|15893732|ref|NP_347081.1| hypothetical protein CA_C0441 [Clostridium acetobutylicum ATCC 824]
gi|15023296|gb|AAK78421.1|AE007558_11 Uncharacterized conserved membrane protein of SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507855|gb|ADZ19491.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 38 SAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIP 84
I+VL R+++A E ++ KI +SG +S+ +++
Sbjct: 104 DYIIVLGAGLRGKHMLGTQYERVKKAAEYVKENPDVKIVVSGGKGNGEDISEAEAMKQYF 163
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL---IVTHDYHMPRTFLELQRI 141
+ + I + K+ NT N + + EK + + +VT YH+ R L +R+
Sbjct: 164 LNKGFKNDSIIMEDKSKNTFENLRNSKKILEKISNKKEIRVGVVTSSYHITRAKLLGKRV 223
Query: 142 NSTVQFIPYPI 152
+ IP PI
Sbjct: 224 GLKLYAIPAPI 234
>gi|300703732|ref|YP_003745334.1| hypothetical protein RCFBP_11417 [Ralstonia solanacearum CFBP2957]
gi|299071395|emb|CBJ42714.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 265
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 45/182 (24%), Gaps = 45/182 (24%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
W ++ ++ R + P P VVL G ++
Sbjct: 44 WVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQPHGEGAVVLLGGSRKLAAREYA 103
Query: 53 --------AFEL-----------------LENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
L L + GV + L+ +
Sbjct: 104 GQGETALSGLSLERTVYAARLAHAARLPVLATGGAPQGL--GVPEAELMGRLVADLGQDA 161
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
I ++ TE NA ++ + +VTH +HM R + V
Sbjct: 162 RW------IETRSATTEENAAFSAPMLRAAGIQRIYLVTHYWHMARARRYFEGQGLIVTP 215
Query: 148 IP 149
P
Sbjct: 216 AP 217
>gi|126651406|ref|ZP_01723610.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
gi|126591659|gb|EAZ85755.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
Length = 297
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 23/164 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+F+ L F+ + + + + I+ L R+
Sbjct: 88 FFYAFLIFGYTMFLYTSVLAYAVLYHFTPIRY-EPNYIIALGSGLIGDRVPPLLASRLNE 146
Query: 53 AFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIR-QDLAECCIDIGYKALNTEGN 106
A + + GE+ FI G VS+ ++ + D+ I + ++ NTE N
Sbjct: 147 AVKQYKK-YGERPFIIVSGGQGTDEKVSEARAMKTYLLDVHDIPANKILMEDQSTNTEEN 205
Query: 107 AQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+++ + + VT+++H+ R L ++ +
Sbjct: 206 MIFTKNIMDQHAQGEKYRSIF-VTNNFHVFRASLYAKKAKLDAE 248
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50]
gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 251
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 35/223 (15%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSV----SAIVVLTGE----PIRIE 51
R + V + G + ++ + P +AIV+L RIE
Sbjct: 26 RMLYGLSLVLFLALGCGPIAAWLLDGLQSDYQAKPPIAWGQRNAIVLLGAGTEQAAGRIE 85
Query: 52 RAFELLEN--QIGEK------------IFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
+ + + +SG H ++ + + + + +
Sbjct: 86 PGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAEANVYRDPLVALGVDAADV 145
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
++NT NAQ SA + + V++V+ H+ R+ L P+ +
Sbjct: 146 LPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALYFAHFG----VAATPVRA 201
Query: 155 HDLEENSSIF----KIKILRVLLIEYLKILLLSIQLSLSTQTA 193
L S+ + L EYL I+ + L A
Sbjct: 202 DYLHARWSVVPLSYNFAVADFALHEYLGIVRYHVYNLLGWNPA 244
>gi|116492028|ref|YP_803763.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
gi|116102178|gb|ABJ67321.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
Length = 339
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 77/206 (37%), Gaps = 35/206 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
+ + + IF F SF+ V +P +V I+VL R+
Sbjct: 132 LTLLGIDVTLTFIFVCYLFYSFLYQV----VPIKGNVDYIIVLGAGVRSETVTPLLKGRL 187
Query: 51 ERAFELLENQIGE-KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++A E Q G KI +SG VS+ + K Q + E I + ++ T N
Sbjct: 188 DKALEYYRRQNGAVKIVVSGGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQSTTTFEN 247
Query: 107 AQEA-----SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
Q + + W ++ T++YH+ R + ++ + P + L
Sbjct: 248 MQFSKQKIEADWQGTQPPQ-IIFATNNYHVLRGVIYARKAGLNANGVGSPTSFYFLPSA- 305
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLS 187
L+ EY+ +L++ +L+
Sbjct: 306 ----------LIREYIALLVIYKKLT 321
>gi|326772953|ref|ZP_08232237.1| integral membrane protein [Actinomyces viscosus C505]
gi|326637585|gb|EGE38487.1| integral membrane protein [Actinomyces viscosus C505]
Length = 337
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 40/225 (17%)
Query: 5 WYGLFVCLIF-----FIMGFISFIRYVKQMHI----PDHPSVSAIVVLTGE--------- 46
W L L+F + + F+ I P +VV
Sbjct: 110 WALLVAALMFCACAYLGVFLLIFLGQTAVQRIWGGRRAMPHPDVVVVHGAGLIDGKVGPL 169
Query: 47 -PIRIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIG 97
RI E ++ G + + +SG VS+ + I + + I +
Sbjct: 170 LGSRIAGGIEAWRDEEGLRPGVPLLVMSGGQGADEPVSEARAMADYAIARGVPPERILLE 229
Query: 98 YKALNTEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
++ T N + VL+VT +H RT + + +P+ +
Sbjct: 230 DRSTTTRTNISYTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMG-----VPWAVAPA 284
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
+ + + L EY+ +L + +L+ + F L
Sbjct: 285 R---TAWFYIVNAW---LREYVAVLTYRRRPALACAAVAGVFAVL 323
>gi|326406078|gb|ADZ63149.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 341
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 33/204 (16%)
Query: 20 ISFIRYV----KQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKI 65
F Y+ IP + I++L R+++ E + K
Sbjct: 145 FLFAAYILYSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLKSRLDKGIEYYQKNPTAKF 204
Query: 66 FISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS-----AWAEKN 117
+SG VS+ ++K Q++ I K+ T N + W++K
Sbjct: 205 VVSGGQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKE 264
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ T++YH+ R L QR+ Q + P + L L+ EY+
Sbjct: 265 MLPSIIFSTNNYHVLRGSLYAQRVKLKAQGVGAPTALYFLPTA-----------LIREYI 313
Query: 178 KILLLSIQLSLSTQTASQFFITLI 201
+LL + S FI +
Sbjct: 314 ALLLHRKIILFSVLGGVLLFIIIS 337
>gi|148544180|ref|YP_001271550.1| hypothetical protein Lreu_0951 [Lactobacillus reuteri DSM 20016]
gi|184153552|ref|YP_001841893.1| hypothetical protein LAR_0897 [Lactobacillus reuteri JCM 1112]
gi|227364609|ref|ZP_03848669.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|325682276|ref|ZP_08161793.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
gi|148531214|gb|ABQ83213.1| protein of unknown function DUF218 [Lactobacillus reuteri DSM
20016]
gi|183224896|dbj|BAG25413.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070353|gb|EEI08716.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|324978115|gb|EGC15065.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
Length = 271
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHS-VSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++A + KI +SG V + S+ ++ I + I +ALNT
Sbjct: 126 ATRLDKAINCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPARKIICETQALNT 185
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N A + +++VT D+H+ R +++ FI
Sbjct: 186 WQNLTFARQLIKPQE--TIVVVTSDFHVLRARAYARKMGLNWSFI 228
>gi|319954081|ref|YP_004165348.1| hypothetical protein Celal_2563 [Cellulophaga algicola DSM 14237]
gi|319422741|gb|ADV49850.1| protein of unknown function DUF218 [Cellulophaga algicola DSM
14237]
Length = 186
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 15/152 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRI 50
+ + + L+ + G I +I + + V+L G R+
Sbjct: 5 KQIYKFVISILLIWFFGHIMYI--TIDGLTKNEKTADIAVILGNKVNEDGTLSERLEKRL 62
Query: 51 ERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ L +N +KI +SG + ++ I++++ + + I NT
Sbjct: 63 QCGLRLFQNGQVKKIIVSGGLGKEGFYEGNKMKAYLIKKNVPDSLVIIDNFGNNTLATVH 122
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ NF +++V+ +H+ RT + ++
Sbjct: 123 NTIKLKDSLNFESIIVVSQYFHLTRTKMLFRK 154
>gi|169632529|ref|YP_001706265.1| hypothetical protein ABSDF0656 [Acinetobacter baumannii SDF]
gi|169151321|emb|CAP00033.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 261
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PI 48
+ W + C +++G F ++K+ + P+V AI+VL
Sbjct: 65 LHTLWRFGWFCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSAILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A + L + I G+ S + + + + + + + + K+ +TE
Sbjct: 125 RLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
N + + E+ + + IVT D+H PR
Sbjct: 185 LNLKNSKPLLEQAHINVNQPIAIVTSDFHTPRAAA 219
>gi|311029687|ref|ZP_07707777.1| hypothetical protein Bm3-1_03874 [Bacillus sp. m3-13]
Length = 192
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E A E L+ K+ SG +++ +++ ++ + E I + ++ T
Sbjct: 63 RVEAALEYLKENPNTKVIASGGQGPGEDITEAEAMRRYFVKHGIKEERIILEDRSTTTFE 122
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + A E V IV++D+HM R L
Sbjct: 123 NLSYSKALMEDGA--SVAIVSNDFHMYRASL 151
>gi|281491044|ref|YP_003353024.1| hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
gi|281374802|gb|ADA64322.1| Hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
Length = 341
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 33/204 (16%)
Query: 20 ISFIRYV----KQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKI 65
F Y+ IP + I++L R+++ E + K
Sbjct: 145 FLFAAYILYSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLKSRLDKGIEYYQKNPTAKF 204
Query: 66 FISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS-----AWAEKN 117
+SG VS+ ++K Q++ I K+ T N + W++K
Sbjct: 205 VVSGGQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKE 264
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ T++YH+ R L QR+ VQ + P + L L+ EY+
Sbjct: 265 MPPSIIFSTNNYHVLRGSLYAQRVKLKVQGVGAPTALYFLPTA-----------LIREYI 313
Query: 178 KILLLSIQLSLSTQTASQFFITLI 201
+LL + S FI +
Sbjct: 314 ALLLHRKIILFSVLGGVLLFIIIS 337
>gi|303242098|ref|ZP_07328589.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302590392|gb|EFL60149.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 218
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 10/116 (8%)
Query: 35 PSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIR 86
S I+VL R+ +R EL I ISG ++K +I
Sbjct: 23 TSADLIIVLGSHDTRVAQRGAELYLKGFAPFIVISGGLGKITKHLWNMTEAEKFAEIACS 82
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWA--EKNNFHHVLIVTHDYHMPRTFLELQR 140
+ E I + ++ NT N N + ++ V Y RT+ ++
Sbjct: 83 MGVPEEKIILETRSTNTGENILFTRELILDRNLNINSIITVNKPYMERRTYAAFKK 138
>gi|284007579|emb|CBA73135.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 268
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 23/127 (18%)
Query: 40 IVVLTGEP-----------------IRIERAFELLENQIGEKIFISG--VHHSVSKDILL 80
IVVL G R+ L G K+ +G ++ +S +
Sbjct: 86 IVVLGGGFTYNPDWPPSANLINNSLARVTEGIRLYLQHSGAKLIFTGGRGNNMISNAEVA 145
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF-LELQ 139
K+ + + E + + +TE A E K F L+VT HM R L
Sbjct: 146 AKVALSLGVPETDLITLTEPRDTEEEALEVEKIVGKQPF---LLVTSANHMARAEHFFLA 202
Query: 140 RINSTVQ 146
R +
Sbjct: 203 RNMHPIT 209
>gi|260589199|ref|ZP_05855112.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260540280|gb|EEX20849.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 250
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 22/128 (17%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV--- 70
+ M + ++ IVVL RI+RA + L+ K+ +SG
Sbjct: 80 ISAMRQKEVKNLDYIVVL--GAQVRGNVPSKSLQYRIDRAEKYLKENKKTKVVLSGGKGE 137
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE---KNNFHHVL--IV 125
+S+ + + R+ +A + + K+ NTE N + K + + IV
Sbjct: 138 DEGISEAQCMAEELGRKGIAFNRLLLEKKSRNTEQNITFTIPIIQQDSKKDLKELKIGIV 197
Query: 126 THDYHMPR 133
T+ +H+ R
Sbjct: 198 TNGFHIYR 205
>gi|27380972|ref|NP_772501.1| hypothetical protein bll5861 [Bradyrhizobium japonicum USDA 110]
gi|27354138|dbj|BAC51126.1| bll5861 [Bradyrhizobium japonicum USDA 110]
Length = 207
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 49 RIERAFELLENQIGEKIFISG-VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R + A L + +SG V + +++ + + I + A NT
Sbjct: 55 RADTAARLWREGLFRWSIVSGGVTPGSEQSECTIIKAAMVAAGIPADRILEEHGATNTGE 114
Query: 106 NAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + N V+ + + + R + L R V+ + + S
Sbjct: 115 NVIVSLPVIDAALGLQNIRSVICLGNTWTARRYPMTLHRHWPEVEKMLLTVDSFATPRAL 174
Query: 162 SIFKIKILRVLLIEYLKILLLSIQ 185
++ R +L E+ KI +
Sbjct: 175 WHTDVEFRRRVLHEWDKIEPYKAR 198
>gi|288916964|ref|ZP_06411336.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288351673|gb|EFC85878.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 202
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 49/150 (32%), Gaps = 22/150 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGF--ISFIRYVKQMHIPDHPSVSAIVVLTGEPI---------- 48
MR + + L+ F + ++ D + ++VL G
Sbjct: 1 MRIVLMAVALLLVGSAATFGQVWWVGRGD-----DRRASDTLIVL-GASQYDGRPSAILA 54
Query: 49 -RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + ++ G + ++ + + + + +T
Sbjct: 55 ARLDHALELYRAGVAPRVITVGGNQPGDRFTEAEVAATYLRDHGVPASAVLAVPQGRDTL 114
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + ++ ++VT +H R+
Sbjct: 115 SSMIAVAGLMDSRHWGSAVVVTDRWHSLRS 144
>gi|262204353|ref|YP_003275561.1| hypothetical protein Gbro_4535 [Gordonia bronchialis DSM 43247]
gi|262087700|gb|ACY23668.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 334
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 2/100 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ E I +SG +++ +QK + + I K+ +T
Sbjct: 161 NRVRAGKSQAELTTSAPIVVSGGVPKKGITEASAMQKWLVDNGVDASRITTEDKSGSTVA 220
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
NAQ +A +++VT H+ R + V
Sbjct: 221 NAQNTAAILAGKGVRDIILVTSPSHIRRAAADFAATGLRV 260
>gi|330464951|ref|YP_004402694.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
gi|328807922|gb|AEB42094.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
Length = 250
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 18/134 (13%)
Query: 31 IPDHPSVSAIVVL------TGE------PIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
+ + P ++VL G R+E A EL+ Q + +SG H S D
Sbjct: 69 VDEAPVADVVIVLGTAVTEDGRQPGIRLAGRLETAAELVRQQRARVVLVSGDGHGASGDE 128
Query: 79 LLQKI---PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + I L+T + + A LIVT YH+ R
Sbjct: 129 TAAMTAHLTEQLGVDPQRIVADPYGLDTYDSCRRARE---VYGVERALIVTQSYHLSRAV 185
Query: 136 LELQRINSTVQFIP 149
+++ +P
Sbjct: 186 TLCRQLGVDADGVP 199
>gi|183598370|ref|ZP_02959863.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
gi|188020546|gb|EDU58586.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
Length = 275
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 41/131 (31%), Gaps = 24/131 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG--VHHSVSKDILL 80
IVVL G R+ L G K+ +G + ++S +
Sbjct: 88 IVVLGGGFTYNPDWSPSSNLLNNSLPRVTEGVRLYLKYPGSKLIFTGSKANSTISSAEVA 147
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + + +T+ A E K F L+VT H+PR
Sbjct: 148 AMVAQSLGVPASDTIALTEPKDTQEEAFEVEKIIGKEPF---LLVTSANHLPRAISMF-- 202
Query: 141 INSTVQFIPYP 151
+Q IP P
Sbjct: 203 TARGMQPIPAP 213
>gi|327184380|gb|AEA32827.1| hypothetical protein LAB52_09625 [Lactobacillus amylovorus GRL
1118]
Length = 319
Score = 48.7 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 15/110 (13%)
Query: 40 IVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIR 86
IVVL RI+R E+ G K+ +SG + + +
Sbjct: 148 IVVLGAGLIGKKVTPLLASRIDRGIEIYHKNPGSKLIMSGGQGSDEEIPESHAMAAYAEE 207
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + I I ++ T N + + + + IVT+ YH+ R +
Sbjct: 208 HGVPQSDIIIEDRSKKTNQNLKFSHQLMQPD--STFCIVTNSYHVYRALV 255
>gi|304384982|ref|ZP_07367328.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
gi|304329176|gb|EFL96396.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
Length = 338
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 38/208 (18%)
Query: 7 GLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
G+ + I + F F ++ Q+ V I+ L R+
Sbjct: 129 GVLLVFIGIDVTFTFIFSCYLFYSFLYQIIPIRE-KVDYIITLGAGIRSETVTPLLKGRL 187
Query: 51 ERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++A E Q G FI SG VS+ + K Q + E I + ++ T N
Sbjct: 188 DKALEYFWKQDGNPKFIVSGGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQN 247
Query: 107 AQEAS-----AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ + W +K+ V+ T++YH+ R+ + ++ + P + L
Sbjct: 248 MKFSKQKIEKDW-KKSGVPKVIFATNNYHVLRSAIYARKAGLNANGVGSPTSFYFLPSA- 305
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLS 189
L+ EY+ +L++ + +++
Sbjct: 306 ----------LIREYIALLVIYKKTTIA 323
>gi|160899211|ref|YP_001564793.1| hypothetical protein Daci_3776 [Delftia acidovorans SPH-1]
gi|160364795|gb|ABX36408.1| protein of unknown function DUF218 [Delftia acidovorans SPH-1]
Length = 280
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV--KQMHIPDHPSVSAIVVL-----TGEP-----I 48
+R W+ + L +++ + F ++ +P V AIVVL G+P
Sbjct: 84 LRRAWWLGWAALAMWLVSLLVFWAHLLSASSGLPPDQPVQAIVVLGSATRDGQPSLTLAQ 143
Query: 49 RIERAFELLENQIGEKIFIS-GVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++RA EL Q + S GV S+ + + + R L + + ++ +T
Sbjct: 144 RLDRAAELAARQPKALVLTSGGVDFGESESEGAIMARYLQQRHGLPPERLLMEERSTSTA 203
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRT 134
N + + + IVT D+H R
Sbjct: 204 LNLAWSLPLLQARGVEPQAAIAIVTSDFHTLRA 236
>gi|296140786|ref|YP_003648029.1| hypothetical protein Tpau_3100 [Tsukamurella paurometabola DSM
20162]
gi|296028920|gb|ADG79690.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 190
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 15/139 (10%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFELLEN 59
+ LI + +++++ + I + S ++VL GEP R++ A +L
Sbjct: 2 IVLIVIVAASSTWVQWESRSRIDQNASRDWVIVLGDRVVDGEPSVYLRERLDTALAVLRE 61
Query: 60 QIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +SG S D + ++ I+ + I + T A
Sbjct: 62 NRARRALVSGHAASTKGDEVAAMRTYLIQHGVDPGKITDDRFGVTTYNTCARAR---TVF 118
Query: 118 NFHHVLIVTHDYHMPRTFL 136
++VT D+H+ R
Sbjct: 119 GIDSAILVTQDFHLRRAVA 137
>gi|221633222|ref|YP_002522447.1| ACR protein [Thermomicrobium roseum DSM 5159]
gi|221156511|gb|ACM05638.1| Uncharacterized ACR [Thermomicrobium roseum DSM 5159]
Length = 210
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 21/186 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPI---------- 48
R+F G F+ L G + + + + AI+VL G
Sbjct: 16 RWFVAG-FLGLTALTAGTTILVLGLAIAEHARSDERAPADAILVL-GAAQYNGWPTRAFR 73
Query: 49 -RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L I + G S+ + Q + + + + NT
Sbjct: 74 ARLDHAAALFRQGYAPTIVLVGGKTDRDLESEAEAGARYLREQGIPDNALIVVPVGRNTW 133
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ + A+ + +L+V+ +H+ R+ +L + Q + P + S +
Sbjct: 134 QSIEAAAQPLHERGVQRLLVVSDGFHLFRS--KLMARSFGFQVVGSPAPGSPIRPGSPLE 191
Query: 165 KIKILR 170
+ I R
Sbjct: 192 RWYIAR 197
>gi|86140156|ref|ZP_01058718.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
gi|85823093|gb|EAQ43306.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
Length = 164
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 10/111 (9%)
Query: 39 AIVVLTGEP------IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDL 89
V G R +A +L + G H S+ ++++I +
Sbjct: 8 GAAVWPGGRPSPTLRRRCLQAAKLFRRGRVSHVICCGGLGQHPP-SEAEVMRQICREAGV 66
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ I + ++ T N A + + ++++VT YH R + +
Sbjct: 67 PDSAILLEDQSRTTLENLANIRALLARLDQPNIVLVTDRYHKWRALMVARH 117
>gi|218290184|ref|ZP_03494343.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239779|gb|EED06969.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 259
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 31 IPDHPSVSAIVVL-----------------TG-----EPIRIERAFELLENQIGEKIFIS 68
P P+ AIVVL TG R+ A L + S
Sbjct: 69 PPARPTGDAIVVLGAGFSAAAPDFADPAANTGTLYGDSGERVLAAAALYRRLHLPIVL-S 127
Query: 69 GV------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
G S + ++ + + + + + TE NA+ +A + +
Sbjct: 128 GGPLIRANGKSYAFALIAARDLAALGVPARELYVDATSRTTEENAEHTAAILHRLHRSRP 187
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++V M R ++ +R+ V+ PYP+
Sbjct: 188 ILVASAAQMARAVIDFRRV--GVKVEPYPV 215
>gi|328950144|ref|YP_004367479.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450468|gb|AEB11369.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 206
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 16/198 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQ 60
R W L + + + + + D A++ L G R A L+
Sbjct: 13 RLVWLALLAAVGLWAGRVLWLPGLGGYLVVADPLEPAQAVLPLAGAQHRAAAAARLVRAG 72
Query: 61 IGEKIFISGV---HHSVSKDILLQ----KIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
E + I+ + + Q + + + GY A T AQ A A+
Sbjct: 73 YAEVLLITQIPLAEPGARARYVAQVQAVALQAGLNPERIRVVPGY-ARTTYAEAQNARAF 131
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINST----VQFIPYPIISHDLEENSSIFKIKIL 169
E + +++VT YH R L +R V+ P + +
Sbjct: 132 LEGRGWTSLIVVTDAYHTRRARLLFRRAFQGSGITVRVRP---AEGGAPPEAWWTTPEGQ 188
Query: 170 RVLLIEYLKILLLSIQLS 187
R +L EYLK++ ++ +
Sbjct: 189 RAVLSEYLKLMAHAVGVR 206
>gi|260548892|ref|ZP_05823114.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408060|gb|EEX01531.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 261
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 19/151 (12%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVLTGE----------PIRIER 52
W ++C +++G F ++K+ + P+V AI+VL R++
Sbjct: 69 WRFGWLCFWIWLIGLGYFFSFIKENKNSSQNLPAVKAIIVLGSGVENGRPSAILAKRLDT 128
Query: 53 AFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A + L + I G+ S + + + + +A+ + + K+ +TE N +
Sbjct: 129 AAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLEQHFHIAKERMILEDKSTSTELNLK 188
Query: 109 EASAWAEKNNF---HHVLIVTHDYHMPRTFL 136
+ E+ + + IVT D+H PR
Sbjct: 189 NSKPLLEQAHISIDQPIAIVTSDFHTPRAAA 219
>gi|289642513|ref|ZP_06474657.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
gi|289507687|gb|EFD28642.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
Length = 185
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 19/121 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
++F F+ V+ P V AIV+ G P R+ RA EL+ + +S
Sbjct: 26 LAAVLFLTATGRLFVWPVRDAPEP----VDAIVMYAGSPGRLARAIELVRAGYAPVLAVS 81
Query: 69 ---GVHHSVSKDILLQKIPIRQDLAE-CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
G P L I + T+G A+ + A + + V+I
Sbjct: 82 TPPGADD-----------PCPAALPGIQVICFRPDPVTTQGEARMTAELATRYGWRSVMI 130
Query: 125 V 125
V
Sbjct: 131 V 131
>gi|126659613|ref|ZP_01730743.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
gi|126619059|gb|EAZ89798.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
Length = 243
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIE-RAFELLENQIGEKI 65
+FV LI FI+ + F + ++ I + SV I+VL G IR E A E+ +++
Sbjct: 23 LIFVLLIGFILTSLVF-NVLVRLPINTNHSVDGILVL-GGSIRREIHAAEIASQYEYQEV 80
Query: 66 FISGVHHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I V + ++ + + E C A +T N +K+ H
Sbjct: 81 PII-VSQGSKPPCIKLIFQREQARMHKVWIEQC------AYSTFDNFFFCVPLLQKHGVH 133
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
V ++T H+PR L +I+ + I + +
Sbjct: 134 KVKVITSQSHLPRAKW-LSQIHLGAKGIAVEVDTPR 168
>gi|302534287|ref|ZP_07286629.1| integral membrane protein [Streptomyces sp. C]
gi|302443182|gb|EFL14998.1| integral membrane protein [Streptomyces sp. C]
Length = 257
Score = 48.3 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFEL 56
+ +C++ + + ++ + + V+ G R++ A EL
Sbjct: 54 MALCVLALLPSTWTHAAAADRLRTTAAAPDAGVAVVFGAGLWKGRPTPYLAYRLDAAVEL 113
Query: 57 LENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + ++G + D ++ + + I Y +T +
Sbjct: 114 YRAGKVKVVLVTGDNSRTEYDEPGAMRAYLRGHGIPDDRIVSDYAGFDTWDSCVRVREIF 173
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
++++ +H+ R Q Y + D +++
Sbjct: 174 ---GVRRAVLISQHFHIHRAVALCQAAGVD----SYGVGVDDEHDSTWY 215
>gi|126173714|ref|YP_001049863.1| hypothetical protein Sbal_1476 [Shewanella baltica OS155]
gi|125996919|gb|ABN60994.1| protein of unknown function DUF218 [Shewanella baltica OS155]
Length = 248
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG VS ++ + + + I A +T
Sbjct: 108 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIE 167
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 168 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAKG----LHPEAAPTDFIGRDDFWWR 220
Query: 165 ----KIKILRVLLIEYLKILLLSIQL 186
+ + + EY+ L L ++
Sbjct: 221 LTADNLVASQRAIHEYIGRLWLWLKT 246
>gi|167724440|ref|ZP_02407676.1| hypothetical protein BpseD_35802 [Burkholderia pseudomallei DM98]
Length = 143
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 11/143 (7%)
Query: 64 KIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
KI +SG + V + + + + + + +++NT NAQ +
Sbjct: 4 KILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRAD 63
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE----NSSIFKIKILRVLLIEY 176
VL+VT H+ R+ L + + L+ + I + L EY
Sbjct: 64 RVLLVTSGIHLRRSMLYFAHFG----VAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEY 119
Query: 177 LKILLLSIQLSLSTQTASQFFIT 199
L I + +L A
Sbjct: 120 LGIARYRLYNALGWNPARTRPGD 142
>gi|302342876|ref|YP_003807405.1| hypothetical protein Deba_1443 [Desulfarculus baarsii DSM 2075]
gi|301639489|gb|ADK84811.1| protein of unknown function DUF218 [Desulfarculus baarsii DSM 2075]
Length = 270
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 36/119 (30%), Gaps = 21/119 (17%)
Query: 40 IVVLTGEPI----------------RIERAFELLENQIGEKIFISG--VHHSVSKDILLQ 81
IVVL G R+ L G ++ SG S +
Sbjct: 90 IVVLGGAQQAGELSAADRLSAASLRRVAEGVRLWRGVPGARLIFSGEASDGRSSVAADMA 149
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ R I + + +T A +A+ A +VT HMPR +
Sbjct: 150 EMATRLGAPSASIVVDEASRDT---ADQAAILARDLGARPFALVTSAAHMPRALTMFRA 205
>gi|289642675|ref|ZP_06474815.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
gi|289507505|gb|EFD28464.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
Length = 205
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 25/197 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGEPI-----------RI 50
+ L V I + G + + + Q+ D ++VL G R+
Sbjct: 2 WLLRVVAILVLAGVMISVFAMIQIWVVGRSDDQRRSDVLIVL-GASQFNGRPSAVFAARL 60
Query: 51 ERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + +I G V ++ + + + + + + +T G+
Sbjct: 61 DHALALYRAGVAPRIVTVGGSQVGDVYTEARAAANYLVSRGVPASAVVVVGEGRDTLGSL 120
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + N + ++VT +H R+ + I + + S ++
Sbjct: 121 RAVARIMAVNRWRSAVVVTDPWHSLRS----RTIARDLDI--DAVTSPATTGPTTRGIAT 174
Query: 168 ILRVLLIEYLKILLLSI 184
LR +L E +
Sbjct: 175 TLRYILREGAAYRFYQL 191
>gi|218437925|ref|YP_002376254.1| hypothetical protein PCC7424_0930 [Cyanothece sp. PCC 7424]
gi|218170653|gb|ACK69386.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 230
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Query: 13 IFFIMGFISFIRYVK-----QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + G F+ + ++ + AI+VL G R A L + I I
Sbjct: 23 LALLAGVGLFVLNLIFNIGIKLPLNTSKPADAILVLGGSIQREIDAARLGKYYPDIPIII 82
Query: 68 SGVHHSVSKDILLQ--KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
S ++ Q ++ + + E C A +T GN + + H V+++
Sbjct: 83 SSGSEEPCMLLIFQKFQLKLDRIWLEKC------ADSTFGNFFYSVPILQGWGVHKVIVI 136
Query: 126 THDYHMPRT 134
T H+PR
Sbjct: 137 TSPSHLPRA 145
>gi|297194511|ref|ZP_06911909.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152286|gb|EFH31635.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 219
Score = 48.3 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 49/157 (31%), Gaps = 19/157 (12%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFIS 68
++ + + + + P+ VV R++ A EL + + ++
Sbjct: 29 WMHAVADSRVRTVAEAPARDVAVVFGAGLWKGRPSPYLAHRLDTAAELYRTGKVKVVLVT 88
Query: 69 GVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
G + V + ++ + + + I Y +T + A L+V+
Sbjct: 89 GDNSRVEYDEPDAMRTYLTGRGVPDDRIVSDYAGFDTWDSCVRAKEIF---GVERALLVS 145
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+H+ R + Y + + + +
Sbjct: 146 QGFHIRRAVALCRSAG----VEAYGVGVAEPHDATWY 178
>gi|48477095|ref|YP_022801.1| hypothetical protein PTO0023 [Picrophilus torridus DSM 9790]
gi|48429743|gb|AAT42608.1| conserved hypothetical protein [Picrophilus torridus DSM 9790]
Length = 168
Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVS-KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R +R LL+ SG ++ + + + I + ++ +T GN
Sbjct: 22 ERAKRGAMLLKEHPEAVAIASGGITNIKCRSEASFIADVINHSIDKDIILEERSTSTIGN 81
Query: 107 AQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR 140
A ++ + IVT YH+ R + +
Sbjct: 82 AFSTGILLKEYKIDVSRIYIVTSCYHVKRALMIFSK 117
>gi|295398606|ref|ZP_06808637.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294973146|gb|EFG48942.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 345
Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 13/103 (12%)
Query: 47 PIRIERAFELLENQI-----GEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIG 97
R++ A + +E Q +I +SG VS+ ++ + + I +
Sbjct: 184 ESRLDMAVDYIERQQFQFQSVPRIIVSGTSTGAESQVSEARIMADYLVDHGVPPEMILLE 243
Query: 98 YKALNTEGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFL 136
+A NT N A + N + VT YH+ R+ L
Sbjct: 244 DQAHNTHENFIYAKGIMQANVKQLKTTKAVFVTSSYHLYRSQL 286
>gi|262046176|ref|ZP_06019139.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
gi|260573506|gb|EEX30063.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
Length = 293
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 15/115 (13%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV-HHSVSKDILLQKI 83
P + IVVL RI R E+ G K+ +SG
Sbjct: 122 PHLDYIVVLGAGIMGTKVTPLLAARISRGIEIYHKNPGSKLIMSGGQGPGEDIPEAAAMA 181
Query: 84 PIRQDLA--ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L + I I K+ T+ N Q + A + N IVT YH+ R +
Sbjct: 182 EYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVYRALV 234
>gi|121587797|ref|ZP_01677556.1| sanA protein [Vibrio cholerae 2740-80]
gi|153819088|ref|ZP_01971755.1| sanA protein [Vibrio cholerae NCTC 8457]
gi|121547961|gb|EAX58042.1| sanA protein [Vibrio cholerae 2740-80]
gi|126510371|gb|EAZ72965.1| sanA protein [Vibrio cholerae NCTC 8457]
Length = 221
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 59 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 118
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 119 SIVRAKEIFDTDNF---LIITQRFHCERALF 146
>gi|158312619|ref|YP_001505127.1| hypothetical protein Franean1_0763 [Frankia sp. EAN1pec]
gi|158108024|gb|ABW10221.1| protein of unknown function DUF218 [Frankia sp. EAN1pec]
Length = 182
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 17/162 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R G + + + I F I V AI +L G R ++A EL +
Sbjct: 16 LRSGALGAALLIAVLNVRMIVF------PKIDKPRPVDAIFMLGGPGERRDKAVELARSG 69
Query: 61 IGEKIFIS--GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
I + +S G + + I + + + T+G A+EA A +
Sbjct: 70 IAPVLVVSMPGTRRCPDAAEVGRDIQVICFWPD--------PVTTQGEAREAGRLARIHG 121
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
+ +L VT R L ++R + + + +
Sbjct: 122 WRSILFVTDRSQDSRARLRIERCYDGEVLV-DAVGTPRRQWP 162
>gi|323359408|ref|YP_004225804.1| hypothetical protein MTES_2960 [Microbacterium testaceum StLB037]
gi|323275779|dbj|BAJ75924.1| uncharacterized conserved protein [Microbacterium testaceum
StLB037]
Length = 337
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 24/161 (14%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFE-----LLENQIGEKIFI 67
+ + +P AIVVL R++RA + +
Sbjct: 144 VSSLLYAALPAPRRPRAIVVLGSGLIRGEVPPLLRGRLDRAIAAWRRAVRAGGAAPVLVP 203
Query: 68 SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK-NNFHHVL 123
SG + + + Q + I ++LNT N + + + + VL
Sbjct: 204 SGGQGPDEPRPEGEAMAEYLRDQGIPGDLIRPETRSLNTRENLEFSRVIVDGIDGGGPVL 263
Query: 124 IVTHDYHMPRTFLELQRINSTVQFI-----PYPIISHDLEE 159
IVT DYHM R L +R + + Y + S L E
Sbjct: 264 IVTSDYHMLRAGLLARRRIPRARVVGARTAAYFVPSAFLRE 304
>gi|168010458|ref|XP_001757921.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690798|gb|EDQ77163.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 352
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 37/140 (26%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFEL------------LENQIG 62
V ++ V AI+VL G R+++A +L L N
Sbjct: 104 VDELEELKSDPVDAILVLAGGQLPGGGVPVWVERRLDKALQLQKLSGHECCIVCLGNGTP 163
Query: 63 EK--IFIS-G--VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-SAWA 114
+ + S G +H S S + + P+R + EC + +T GN A + A
Sbjct: 164 HRPPLLTSEGFVIHESTSCAEYLISKGAPVRVLIKEC------SSYDTIGNGFFALTQHA 217
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
+ + IVT +HMPR+
Sbjct: 218 IPQRWKKMAIVTSAFHMPRS 237
>gi|227878475|ref|ZP_03996414.1| membrane protein [Lactobacillus crispatus JV-V01]
gi|227861926|gb|EEJ69506.1| membrane protein [Lactobacillus crispatus JV-V01]
Length = 278
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 15/115 (13%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV-HHSVSKDILLQKI 83
P + IVVL RI R E+ G K+ +SG
Sbjct: 107 PHLDYIVVLGAGIMGTKVTPLLAARISRGIEIYHKNPGSKLIMSGGQGPGEDIPEAAAMA 166
Query: 84 PIRQDLA--ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L + I I K+ T+ N Q + A + N IVT YH+ R +
Sbjct: 167 EYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVYRALV 219
>gi|325001625|ref|ZP_08122737.1| hypothetical protein PseP1_22816 [Pseudonocardia sp. P1]
Length = 228
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 60/150 (40%), Gaps = 18/150 (12%)
Query: 1 MRYFWYGLF--VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---------- 48
M + + + ++ ++G ++ +R + I D V A++VL G
Sbjct: 24 MTWGARLVVGGLVMLIAVVG-VTALRVWQVARIDDQRPVDAVIVL-GAAQYNGEPSAVLA 81
Query: 49 -RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A +L + + +I G ++ ++ I Q L ++ + ++T
Sbjct: 82 ARLRHAEDLYRDGVAPRIVTVGGGQSGDRYTEAEASREWLIEQGLPSTAVEAVPEGVDTL 141
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
G+ Q + A + + L+V+ +H R
Sbjct: 142 GSLQAVAGTAREQGWESALLVSDPWHSLRA 171
>gi|251779259|ref|ZP_04822179.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083574|gb|EES49464.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 253
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 23/156 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIR---YVKQMHIPDHPSVSAIVVLTGE-----------P 47
RYF + F +G + F+ + + + IVVL
Sbjct: 55 RYFIKFNKLMRFFICIGLVLFLSIEVVIISCPKSNKENTDYIVVLGAGLNNGDQLSYILK 114
Query: 48 IRIERAFELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ + + I +SG +S+ + ++K + Q ++E I + ++ NT
Sbjct: 115 SRLDSVLQCINEFNNNSYIIVSGGKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNT 174
Query: 104 EGNAQEASAWAEKNNFH-----HVLIVTHDYHMPRT 134
N + + E+++ V IVT D+H R+
Sbjct: 175 FENFKYSKKLIEEHSNKNIDDLSVKIVTTDFHGFRS 210
>gi|262191641|ref|ZP_06049819.1| SanA protein [Vibrio cholerae CT 5369-93]
gi|262032483|gb|EEY51043.1| SanA protein [Vibrio cholerae CT 5369-93]
Length = 221
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 59 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 118
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 119 SIVRAKEIFDTDNF---LIITQRFHCERALF 146
>gi|54025401|ref|YP_119643.1| hypothetical protein nfa34310 [Nocardia farcinica IFM 10152]
gi|54016909|dbj|BAD58279.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 315
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 17/133 (12%)
Query: 21 SFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAF---ELLENQIGEKI----------FI 67
+ + + IVVL + EL+ I +
Sbjct: 139 AAAGTLPNPLPALVGPQTGIVVL--GYGLLPDGSLRPELVNRLTAAWIQAIASPFSPVVV 196
Query: 68 SGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + +++ ++ + + L I + +A +T NA ++ ++V
Sbjct: 197 TGGNPQNGITEAEAMRNWLVGRGLPAARIHVENRAGSTVQNALFSTRLLRDIGASSAVVV 256
Query: 126 THDYHMPRTFLEL 138
T H+ R +
Sbjct: 257 TSPNHIRRAVADF 269
>gi|229084714|ref|ZP_04216979.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
gi|228698598|gb|EEL51318.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
Length = 172
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI++A E L+ + +SG +S+ + +++ ++Q++AE I + ++ NT+
Sbjct: 42 RIDKAAEYLKTHEQTIVIVSGGKGKGEDISEALAMKQGLMKQNIAEQRIIMEDRSTNTDE 101
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + A + ++ VT+D+HM R
Sbjct: 102 NIEFSKALIPADKKKGMI-VTNDFHMFRA 129
>gi|147673100|ref|YP_001216757.1| sanA protein [Vibrio cholerae O395]
gi|146314983|gb|ABQ19522.1| sanA protein [Vibrio cholerae O395]
Length = 221
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 59 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 118
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 119 SIVRAKEIFDTDNF---LIITQRFHCERALF 146
>gi|326424076|ref|NP_761614.2| SanA protein [Vibrio vulnificus CMCP6]
gi|319999454|gb|AAO11141.2| SanA protein [Vibrio vulnificus CMCP6]
Length = 245
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL + + +SG H S ++ +++ ++ + E I + Y T
Sbjct: 79 HRIDAAIELYRQNKVQHLLLSGDNAHRSYNEPWTMKRDLLKAGVPETNIHLDYAGFRTLD 138
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A ++F LIVT +H R
Sbjct: 139 SIVRAKKIFASDHF---LIVTQRFHCERALF 166
>gi|153000003|ref|YP_001365684.1| hypothetical protein Shew185_1471 [Shewanella baltica OS185]
gi|151364621|gb|ABS07621.1| protein of unknown function DUF218 [Shewanella baltica OS185]
Length = 248
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG VS ++ + + + I A +T
Sbjct: 108 RLSEGVRQLNLGQEYKLIVSGWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIE 167
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 168 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAKG----LHPEAAPTDFIGRDDFWWR 220
Query: 165 ----KIKILRVLLIEYLKILLLSIQL 186
+ + + EY+ L L ++
Sbjct: 221 LTADNLVASQRAIHEYIGRLWLWLKT 246
>gi|37679647|ref|NP_934256.1| SanA protein [Vibrio vulnificus YJ016]
gi|37198391|dbj|BAC94227.1| SanA protein [Vibrio vulnificus YJ016]
Length = 245
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL + + +SG H S ++ +++ ++ + E I + Y T
Sbjct: 79 HRIDAAIELYRQNKVQHLLLSGDNAHRSYNEPWTMKRDLLKAGVPETNIHLDYAGFRTLD 138
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A ++F LIVT +H R
Sbjct: 139 SIVRAKKIFASDHF---LIVTQRFHCERALF 166
>gi|312138245|ref|YP_004005581.1| integral membrane protein [Rhodococcus equi 103S]
gi|325674847|ref|ZP_08154534.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
gi|311887584|emb|CBH46896.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325554433|gb|EGD24108.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
Length = 220
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 13/134 (9%)
Query: 34 HPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVHH--SVSKDILL 80
+P + IVVL R++ A L + I ++G V++ +
Sbjct: 86 NPLTTNIVVLGAGLYADGTMRPLLVSRLQAALALAQRFPLSPIIVTGGVPQSGVTEAQAM 145
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + I + +T NA + ++VT H+ R ++ +
Sbjct: 146 RQWLVANGIPAFRITEENTSRSTVENAVNTNRILAGRAASGAVVVTSPDHLQRAMVDFRV 205
Query: 141 INSTVQFIPYPIIS 154
+ I +
Sbjct: 206 AVAGRIPIAGVVAP 219
>gi|254506207|ref|ZP_05118351.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219551025|gb|EED28006.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 198
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 10/118 (8%)
Query: 38 SAIVVLTGEPIRIER-AFELLENQIGEKIFISG-VHHSV------SKDILLQKIPIRQDL 89
I VL +R+ A L + + SG V S+ I +
Sbjct: 11 DCIFVLGSNDLRVAEYAATLYLEGWAKTLIFSGGVGRLTDGVFDKSEAETFADIAKDMGV 70
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTV 145
I + KA NT N ++ + + F ++V Y RT+ + V
Sbjct: 71 PSNAIIVENKATNTGENVLYTASLLNQLGHRFSSFILVQKPYMERRTYATFIKQWPGV 128
>gi|225019145|ref|ZP_03708337.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
gi|224948092|gb|EEG29301.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++A E L+ +SG S+ +++K + ++ I +++NT
Sbjct: 56 AGRLDKAAEFLKENPRANCIVSGGRGKDEMYSEAEIMKKYLTEKGISPQRILEENQSVNT 115
Query: 104 EGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ N + + E+ +IVT +H R L RI Q +P
Sbjct: 116 QTNLRNSKQMMEEKGLGKTAVIVTDRFHQYRAQLCADRIQLNSQSVP 162
>gi|320010937|gb|ADW05787.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 253
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 51/175 (29%), Gaps = 20/175 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R + C + ++ + P+ VV R+
Sbjct: 38 RLVQALMVACAVALAPATWLHTTADARVRTTAGAPAQEVAVVFGAGLWEGRPSPYLARRL 97
Query: 51 ERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A EL + ++G + V + ++ Q + + I + +T +
Sbjct: 98 DAAAELYRTGKVRVVLVTGDNSRVEYDEPDAMRTYLTAQGVPDGRIVSDHAGFDTWDSCV 157
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
A + ++V+ +H+ R + Y + D+ + +
Sbjct: 158 RAR---KVFGVDRAVLVSQGFHIRRAIALCRSAGID----AYGVGVDDVHDVTWY 205
>gi|17232735|ref|NP_489283.1| hypothetical protein alr5243 [Nostoc sp. PCC 7120]
gi|17134382|dbj|BAB76942.1| alr5243 [Nostoc sp. PCC 7120]
Length = 192
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 8/131 (6%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGE-KIFISGVHHSVSKDILLQKIPIRQDLAEC 92
P+ AI+ L G+ R E+ L + KI+IS + + Q I
Sbjct: 45 TPTPQAILTLGGDENR-EKFTALFAQFYPDLKIWISSGISYIKARAIFQNAGIPNSRLH- 102
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPY 150
Y+A +T N +K + H+ ++T + HMPR L + + F P
Sbjct: 103 ---FDYRATDTVTNFTTLVGDFQKQHIQHLFLITSESHMPRAKAIAILVLGSRGIAFTPV 159
Query: 151 PIISHDLEENS 161
+ S + S
Sbjct: 160 SVPSKATQPES 170
>gi|320539127|ref|ZP_08038798.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
gi|320030765|gb|EFW12773.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
Length = 247
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+RA + + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQRAINAYNSGKVQYLLLSGDNAQQSYNEPMTMRRDLIAAGVAPGDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R + +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALYRGIQAQCYAVPSPK 173
>gi|119775365|ref|YP_928105.1| hypothetical protein Sama_2230 [Shewanella amazonensis SB2B]
gi|119767865|gb|ABM00436.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 245
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 17/148 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + + + +SG ++ ++++ + + E I A +T
Sbjct: 105 RLTEGLKQMSLGQDCTLIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLARDTLE 164
Query: 106 NAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-DLEENSSI 163
A++ + + +VT HMPR + +++
Sbjct: 165 EARQ----IKALGLQGALRLVTSAAHMPRAMAMFAHEG----ITADAAPTDFTARQSTWW 216
Query: 164 F----KIKILRVLLIEYLKILLLSIQLS 187
+ + + EY+ L ++
Sbjct: 217 RLNADALNSAQKAIHEYVGTLWFELRYG 244
>gi|146311096|ref|YP_001176170.1| hypothetical protein Ent638_1439 [Enterobacter sp. 638]
gi|145317972|gb|ABP60119.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 259
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 29/147 (19%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSV 74
V IVVL G R+ L G K+ +G +
Sbjct: 78 KVDYIVVLGGGYTWDPNWAPSSNLINNSLPRLNEGIRLWLANPGSKMIFTGAPAKTNPVS 137
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + I + +TE EA+A + L+VT H+PR
Sbjct: 138 TAEAGARVAESLGVPRSAIITLDSP-KDTEE---EAAAVKQAIGNAPFLLVTSASHLPRA 193
Query: 135 FLELQRINSTVQFIPYPIISHDLEENS 161
+ + P P ++ L ++
Sbjct: 194 MIFFEHAG----LHPLPAPANQLAVDA 216
>gi|269963912|ref|ZP_06178224.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831399|gb|EEZ85546.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 248
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 27/160 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-----------PSVSAIVVL------ 43
+++ W L + L ++G I + + + P VVL
Sbjct: 12 LKFSWKRLALVLSISLLGLFVTIIAIDRWVVLQAQEEIFTDYEQVPKHEVAVVLGTSKYI 71
Query: 44 -----TGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDI 96
T RI A EL + ++ +SG H S ++ +++ ++ + E I +
Sbjct: 72 GKILNTYYTHRINAAIELYKQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHL 131
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + A F LIVT +H R
Sbjct: 132 DYAGFRTLDSIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|71280901|ref|YP_268732.1| hypothetical protein CPS_2002 [Colwellia psychrerythraea 34H]
gi|71146641|gb|AAZ27114.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 254
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 64/191 (33%), Gaps = 32/191 (16%)
Query: 10 VCLIFFIMGFISFIRYVKQ-------MHIPDHPSVSAIVVL-----------------TG 45
+I I F F V ++ + SV IVVL T
Sbjct: 45 AIVILLISAFAPFSDTVMTAIENDYPPYVKTNVSVDYIVVLGCGHNTNAELPVTSQLKTC 104
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A + + +I SG H+ VS +++ I + I +T
Sbjct: 105 SLQRMVEAVRIYQLHPEARIITSGYGGHNPVSNAETVKQSLILLGVPAQKIITENFPKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR--INSTVQFIPYPIISHDLEENS 161
E AQ + + V++VT+ HMPR+ Q I Y + + D S
Sbjct: 165 EEEAQLIAPRVQG---TQVILVTNADHMPRSINYFQAEGIYPIAAPTGYWVKNPD-SSKS 220
Query: 162 SIFKIKILRVL 172
+ I + L
Sbjct: 221 WVHYIPTSKKL 231
>gi|296272332|ref|YP_003654963.1| hypothetical protein Arnit_0792 [Arcobacter nitrofigilis DSM 7299]
gi|296096506|gb|ADG92456.1| protein of unknown function DUF218 [Arcobacter nitrofigilis DSM
7299]
Length = 235
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 29/204 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAI-----VVLTGE--PIR----IER 52
+ GL + F +F+ + + ++ I ++L G R I+
Sbjct: 42 LFLGLAFIFLISNSVFSNFLISPLENQYKNQKNID-ISKVEYILLLGGDFESRAYEVIKL 100
Query: 53 AFEL-----LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ +L + + K IS + + I + E I + K +T A
Sbjct: 101 SLKLKDTKIITSGYAGKKLIS-------DALYAKNELISLGINENRIIMQDKPKDTIEEA 153
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF--LELQRINSTVQFIPYPIISHDLEENSSIFK 165
F ++VT YHMPR ++Q +N + SI
Sbjct: 154 ISIKKLINNKPF---ILVTSAYHMPRAMKIFKMQGLNPIAMPTNFMAKKQKSNSYLSIKD 210
Query: 166 IKILRVLLIEYLKILLLSIQLSLS 189
+K + + + EY+ + L I+ LS
Sbjct: 211 LKKVSIAIHEYIGLAWLKIKDILS 234
>gi|294636892|ref|ZP_06715221.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
gi|291089900|gb|EFE22461.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 32/190 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
W G+F+ + + + + + +VVL G
Sbjct: 45 LAWLGIFLLSLQPLADRLLAPLEAEYPTLNHGQQAHYVVVLGGGYTYNPQWAPSSNLINN 104
Query: 48 --IRIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L ++ ++G + S + Q + I +
Sbjct: 105 SLARLTEGIRQLALNPQAQLILTGASARGNPYSSAAVAAQVARSLGVAEQRIIVLDSP-R 163
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-----IISHD 156
+T AQEA A AE+ +++VT H+PR + + IP P I S
Sbjct: 164 DT---AQEAEAVAERVGHARLILVTSANHLPRALRFFRH--QGLDPIPAPANQLAITSPL 218
Query: 157 LEENSSIFKI 166
I
Sbjct: 219 NPWERWIPSP 228
>gi|270261203|ref|ZP_06189476.1| putative membrane protein [Serratia odorifera 4Rx13]
gi|270044687|gb|EFA17778.1| putative membrane protein [Serratia odorifera 4Rx13]
Length = 257
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 26/132 (19%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
IVVL G R+ L G K+ +G + +
Sbjct: 82 IVVLGGGYTFNPDWAPSSNLIGNSLPRVTEGVRLYLAHPGSKMVFTGAGGANTLSNAATA 141
Query: 83 IPIRQDLA---ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + L + + ++TE A + S + F ++VT H+PR +
Sbjct: 142 ARVAESLGVPRSDMVLLDRP-MDTEQEALQVSKLVGQQPF---ILVTSANHLPRAMRFFE 197
Query: 140 RINSTVQFIPYP 151
+ IP P
Sbjct: 198 A--KGLHPIPAP 207
>gi|152985105|ref|YP_001346509.1| hypothetical protein PSPA7_1123 [Pseudomonas aeruginosa PA7]
gi|150960263|gb|ABR82288.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 253
Score = 47.9 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 44/216 (20%)
Query: 5 WYGLFVCLIFFIMGFIS-FIRYVKQMHIPDHP----SVSAIVVLTGEPI----------- 48
++GL++ + + ++ +I + D P AIV+L
Sbjct: 43 FFGLWLMSMPLSVEWMGRWIESEPALRAEDWPGLAQRADAIVILGAGRQTSDPAWGDDAP 102
Query: 49 ------RIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAECCID 95
R+ A L + G+H+ LL+ + E
Sbjct: 103 SLLAAERLRYAARLARASSLPVLTSGGLHYGRPPSEAALMANALLEDFGVPARWQEG--- 159
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI--- 152
+ T NA ++ + V++VT +HM R +R + IP P+
Sbjct: 160 ---LSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQRARWSFER--QGFEVIPAPVGFL 214
Query: 153 ISHDLEENSSIFKIKIL----RVLLIEYLKILLLSI 184
+L +LL E + +L +
Sbjct: 215 GGANLRPFGGWLPEAQAFWQSGMLLNEAVGLLGYRL 250
>gi|152975134|ref|YP_001374651.1| hypothetical protein Bcer98_1335 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023886|gb|ABS21656.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 193
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA---IVVLTGEPI---------RIERAFELL 57
+ +F I+G+ISF++Y H A IV+ T RI+ A L
Sbjct: 12 LITMFIIIGYISFLQYEIYRHGHMEVKNDADYMIVLGTSVKGSKPSYALQYRIDAAANYL 71
Query: 58 ENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ +SG +S+ + +++ ++Q ++E + + ++ NT+ N +
Sbjct: 72 KQNERTIAILSGGQGKKEHISEALAMKRGLMKQGISEERMILEDRSTNTDENITFSKELI 131
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
+ + +VT+D+HM R
Sbjct: 132 PPDRKKGL-LVTNDFHMFRA 150
>gi|284929055|ref|YP_003421577.1| hypothetical protein UCYN_04900 [cyanobacterium UCYN-A]
gi|284809514|gb|ADB95219.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 177
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 10/155 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+F+ I + + F Q + I +L G R A +L + I
Sbjct: 14 IFIFTILLTVS-LLFADRQLQNYFIQPKV---IFILGGHEERQRFAAKLALKYTNSPLLI 69
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + + I + Y+A +T N + + +VT
Sbjct: 70 SSGGPQKYLTKIFTNAGVNN----NRIYLDYRAKDTVTNFVSLIKKLKIQKIKSIYLVTS 125
Query: 128 DYHMPRT--FLELQRINSTVQFIPYPIISHDLEEN 160
+ H+ R E+ + P+P+ S+ E
Sbjct: 126 NNHISRAKIIGEIIFGTQGIILKPFPVPSNAPSEP 160
>gi|312114877|ref|YP_004012473.1| hypothetical protein Rvan_2149 [Rhodomicrobium vannielii ATCC
17100]
gi|311220006|gb|ADP71374.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 276
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 32/147 (21%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFEL----------LENQIGEKI 65
D + I+VL G R+ L G +
Sbjct: 74 DVAGAAGIIVLGGGVSGAIPTEGGAIPLGPSVERVTETLRLALRHPDLPVIFSGGSGLIL 133
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+S + ++ ++ + + + ++ NT NA ++A + ++V
Sbjct: 134 QLS---DAPNEADAARRFFEGFGIVAPRLRLEDRSRNTLENATLSAAMLQPKPDQRWILV 190
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPI 152
T +HM R + + +P+P+
Sbjct: 191 TSAFHMRRAAALFEA--QGFRVVPWPV 215
>gi|325916062|ref|ZP_08178352.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
gi|325537738|gb|EGD09444.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
Length = 253
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 17/155 (10%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L KI ISG +S+ ++ Q++ I + + +
Sbjct: 93 YGRIVESARLYRQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLIGLGIDRADLIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + + V++V+ H+ R L + + IP + D
Sbjct: 153 SMNTWQNAQFSQPLLRAHRPDRVVLVSSATHLRRAELYFRHF--GIDAIP---VRADWLT 207
Query: 160 NSSIFKIKI-----LRVLLIEYLKILLLSIQLSLS 189
S + V L EYL I + L
Sbjct: 208 ASWSILPQSYNFTLADVALHEYLGIARYQLYQWLG 242
>gi|42780808|ref|NP_978055.1| hypothetical protein BCE_1734 [Bacillus cereus ATCC 10987]
gi|42736728|gb|AAS40663.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 192
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
M+Y + VC ++ +GF+ + Y K + I+VL
Sbjct: 7 MKYMIGMIMVCAVY--VGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQY 61
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI++A E L+ +SG +S+ + ++ I+ +AE I + K+ +T+
Sbjct: 62 RIDKAAEYLKAHEKAIAIVSGGKGKGEDISEALAMKNELIKLKIAEDRIIMEDKSTSTDE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N ++ VT+D+HM R
Sbjct: 122 NIKFSKPLIPDNMKKGLI-VTNDFHMFRA 149
>gi|325953651|ref|YP_004237311.1| hypothetical protein Weevi_0004 [Weeksella virosa DSM 16922]
gi|323436269|gb|ADX66733.1| protein of unknown function DUF218 [Weeksella virosa DSM 16922]
Length = 225
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ +L ++ + + +SG +++K + + + I + AL+T
Sbjct: 79 KDRLDAGIQLFKSNKVDYLLLSGESLRNKLSEVDVMEKYCVERGVPVEKILVDGAALDTY 138
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + VT +YH+ RT + YP
Sbjct: 139 STVYRTKYI---YGIKNPIFVTQEYHLSRTL--FIGRMLNISCTGYP 180
>gi|229149917|ref|ZP_04278145.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
gi|228633598|gb|EEK90199.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + GF+ + Y K H+ I+VL RI++A
Sbjct: 12 ILVVIIICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 68
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 69 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 128
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 129 KPLIPA-DMKKGMIVTNDFHMFRA 151
>gi|260362436|ref|ZP_05775388.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|260878380|ref|ZP_05890735.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|260899033|ref|ZP_05907474.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|260903412|ref|ZP_05911807.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308088640|gb|EFO38335.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|308091255|gb|EFO40950.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|308107629|gb|EFO45169.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308115571|gb|EFO53111.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|328473012|gb|EGF43860.1| SanA protein [Vibrio parahaemolyticus 10329]
Length = 224
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL + ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 61 HRINAAIELYKQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 121 SIVRAKKIFASERF---LIVTQRFHCERALF 148
>gi|218235669|ref|YP_002366399.1| hypothetical protein BCB4264_A1680 [Bacillus cereus B4264]
gi|218163626|gb|ACK63618.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 192
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
R L V +I + GF+ + Y K H+ I+VL
Sbjct: 5 RIMKGILVVIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKTSYSLQY 61
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI++A E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+
Sbjct: 62 RIDKAAEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + +IVT+D+HM R
Sbjct: 122 NITFSKPLIPA-DMKKGMIVTNDFHMFRA 149
>gi|58338206|ref|YP_194791.1| hypothetical protein LBA1967 [Lactobacillus acidophilus NCFM]
gi|227902607|ref|ZP_04020412.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|58255523|gb|AAV43760.1| putative membrane protein [Lactobacillus acidophilus NCFM]
gi|227869696|gb|EEJ77117.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 350
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + + + I FIM + ++ ++I + ++ IVVL RI R
Sbjct: 141 YLFLSMSIFYIIFIMVMYTLTSWLNLINI-NTKKLNYIVVLGAGLLGKKVTPLLASRINR 199
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E+ K+ +SG + + + + + I I ++ T N +
Sbjct: 200 GIEIYHKNPDSKLIMSGGQGPDEEIPESHAMAAYAEEHGVPKSDIIIEDRSKTTNQNLKF 259
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + N IVT+ YH+ R +
Sbjct: 260 SHQLMKPN--STFCIVTNSYHVYRALV 284
>gi|225352283|ref|ZP_03743306.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157530|gb|EEG70869.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 249
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 18/143 (12%)
Query: 10 VCLIFFIMGFISFIRY----VKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFE 55
V + +G ++F V QMH + +VVL P R+++A E
Sbjct: 69 VAIAVACVGLVAFGTVEGCIVSQMHAQGKSDLDYVVVLGAQVRKSGPSLVLRYRLDKAIE 128
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L+ +SG + + + +AE I ++ TE N +
Sbjct: 129 YLDENPNTICIVSGGKGPNEPFPEAQGMADYLKEHGIAEQRILEEPESKTTEENIVNSKK 188
Query: 113 WAEKNNFHHVLIVTHDYHMPRTF 135
+N V ++T+++HM R
Sbjct: 189 LISDDN-ASVGVITNNFHMFRAL 210
>gi|157146390|ref|YP_001453709.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
gi|157083595|gb|ABV13273.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 29/180 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W +F+ + + + V IVVL G
Sbjct: 45 LGWLAIFLLSLQPVADRLLKPIEDSYPTWQGTQKVDYIVVLGGGYTWNPQWAPSSNLINN 104
Query: 49 ---RIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L G K+ +G + + + + I + +
Sbjct: 105 SLPRLNEGVRLWLANPGSKLIFTGAAAKTNRVSTAEAGARVAQSLGVPRSDIITLD-QPK 163
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+TE A+ F L+VT H+PR + Q V P P ++ L +S
Sbjct: 164 DTEEEAEAVKQAIGDAPF---LLVTSASHLPRAMIFFQH----VGLHPLPAPANQLAIDS 216
>gi|182413009|ref|YP_001818075.1| hypothetical protein Oter_1189 [Opitutus terrae PB90-1]
gi|177840223|gb|ACB74475.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 258
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 47 PIRIERAFELLEN----QIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RIERA EL + ++ ++G +K+ + + + I + K
Sbjct: 106 YSRIERACELYRSATATGAACRLIVTGDDISDLGTAKEPVYVQRLRALGVPVGDIRVEGK 165
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
NT A+ S + + + +VT HM R + + + ++
Sbjct: 166 GRNTYRQAELTSEILKSERYDRIFMVTSGLHMKRALRYFRNFGVRAIPVASDYVIGNITL 225
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ I + L +Y + L I +L
Sbjct: 226 LPLGSNLAIADIALHQYAGLARLWIYNAL 254
>gi|117923765|ref|YP_864382.1| hypothetical protein Mmc1_0451 [Magnetococcus sp. MC-1]
gi|117607521|gb|ABK42976.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 230
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 5/145 (3%)
Query: 44 TGEPIRIERAFELLENQIGEKIFISGVHH-SVSKDILLQKIPIRQDLAECCIDI-GYKAL 101
T R+ L G I ++G + + + + +
Sbjct: 84 TCGLARVRYGAYLYRA-TGRPILVAGGAPYGEQRSEADAMAEVLEREFRIPVMFREGGSR 142
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEE 159
NT NA+ ++A ++ H+ +VTH M R + V P + S
Sbjct: 143 NTWENAKNSAAILKREGLTHIFLVTHAKDMSRAAWAFREQGIQVTEAPTLFKTKSPAWPL 202
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
R L E + IL +
Sbjct: 203 PYLPDNFYEFRWALHELVGILYYRL 227
>gi|262404114|ref|ZP_06080669.1| hypothetical protein VOA_002104 [Vibrio sp. RC586]
gi|262349146|gb|EEY98284.1| hypothetical protein VOA_002104 [Vibrio sp. RC586]
Length = 215
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 16/137 (11%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFIS--------GV 70
+ + Q P I+VL +R+ E A +L I ++ S GV
Sbjct: 12 LWHYLQLHQQPEP----ADVILVLGSNDVRVAEHAAKLYHQGIAPRVLFSGGLGRFTQGV 67
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHD 128
+ + + + E I + ++ N+ N + + +L+V
Sbjct: 68 FQQT-EAEIFAALAKEAGVPEKAILLETQSTNSGENILFSHHLLAQQAQPIQRILLVQKP 126
Query: 129 YHMPRTFLELQRINSTV 145
Y R + +
Sbjct: 127 YMERRAYATFMKQWPDT 143
>gi|153814458|ref|ZP_01967126.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|317500172|ref|ZP_07958405.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087601|ref|ZP_08336529.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848854|gb|EDK25772.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|316898461|gb|EFV20499.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330399780|gb|EGG79440.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 242
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELL 57
+CL +I+ I+ M I++L R++ A L
Sbjct: 60 ICLGLWILFLTVEIKICLGMFSKPERGAQWIIIL--GAQVRGRKITDSLKRRLDAAIHYL 117
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
E + +SG +S+ +++ I Q +AE I ++++T N + +
Sbjct: 118 EENERTMVVVSGGRGPGEDISEADAMEQYLIEQGVAENRIRKEDQSVSTRENLSFSRRFI 177
Query: 115 EKNNFHHVLIVTHDYHMPRTFL 136
+ + V IVT+++H R L
Sbjct: 178 DPKH-ETVGIVTNNFHSYRAKL 198
>gi|33239613|ref|NP_874555.1| hypothetical protein Pro0161 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237138|gb|AAP99207.1| Uncharacterized conserved protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 12/162 (7%)
Query: 14 FFIMGFISFIRYVKQMHI-----PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
I+GF++ I +K + + S I+VL GE R + + + IS
Sbjct: 9 LIILGFLTLIIIMKPLVPFLKSRLSNNSPQLILVLGGEVDREIIGIKFAKELKMP-LLIS 67
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G + D L+QK I L + Y+A +T N N +H+L++T +
Sbjct: 68 GGSNPEYSDWLIQKEGISTAL----VKRDYRAKDTLTNFTSIVDDLADENINHILLITSE 123
Query: 129 YHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
YH+ R + E+ + ++ I ++ S K I
Sbjct: 124 YHINRAKIVGEIITGSRGIRLTSLSIPCTAFCQHESQRKKNI 165
>gi|332672040|ref|YP_004455048.1| hypothetical protein Celf_3550 [Cellulomonas fimi ATCC 484]
gi|332341078|gb|AEE47661.1| protein of unknown function DUF218 [Cellulomonas fimi ATCC 484]
Length = 212
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 5/100 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A EL E + +SG + + D ++ + + + + + L+T
Sbjct: 60 RLDAAAELYAQGTVEVVLVSGDNRTPQHDEPTAMRDWLVERGVPADRVVRDHAGLDTHDT 119
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
A ++VT YH+ R + V
Sbjct: 120 CVRAHD---VFGVEEAVVVTQSYHLRRMLFSCRAAGIDVT 156
>gi|291451163|ref|ZP_06590553.1| integral membrane protein [Streptomyces albus J1074]
gi|291354112|gb|EFE81014.1| integral membrane protein [Streptomyces albus J1074]
Length = 228
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 49/178 (27%), Gaps = 19/178 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
+ L ++ F D VV R++
Sbjct: 21 ALLAVMVLCVLALLPAAWMRFSADGHLRSTADVERTEVAVVFGAGLWGEEPSPYLARRLD 80
Query: 52 RAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A EL E E + ++G + + +++ + + + + I Y +T +
Sbjct: 81 AAAELYEAGRTEVVLVTGDNSREEYDEPEAMRRYLVARGVPDHRIVSDYAGFDTWDSCVR 140
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
A ++++ +H+ R + Y I D + S
Sbjct: 141 ARKIF---GVDKAVLISQGFHIHRAVTLCRSAG----LQAYGIGVDDRHDVSWYAGGA 191
>gi|326792615|ref|YP_004310436.1| hypothetical protein Clole_3554 [Clostridium lentocellum DSM 5427]
gi|326543379|gb|ADZ85238.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 233
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 45/196 (22%)
Query: 12 LIFFIMGFISFIRYV-------------KQMHIPDHPSVSA--IVVLTGEPI-------- 48
+ +GF +F+ + D P + + I+VL
Sbjct: 15 VFIIGLGFFTFLASLLINLYMINTANTYIYSSPNDTPLLDSGVIIVL--GAQVHSNGNPS 72
Query: 49 -----RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKAL 101
R++ A+ + +N KI +SG H + D + ++ I + I + +
Sbjct: 73 GILKDRLDTAYAIYKNNSQLKILVSGDHGQKNYDEVNAMKDYLISLGIPTKQIYLDHAGF 132
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+T A E N +IVT DYH+ R + + Y + + L
Sbjct: 133 STYETMYRAKEIFEVNK---AIIVTQDYHLKRAV----YLANGRGIEAYGVKADIL---- 181
Query: 162 SIFKIKILRVLLIEYL 177
I EYL
Sbjct: 182 --SYPNIKYFEAREYL 195
>gi|228964701|ref|ZP_04125808.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794951|gb|EEM42450.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + GF+ + Y K H+ I+VL RI++A
Sbjct: 12 ILVVIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGAKPSYSLQYRIDKA 68
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 69 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 128
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 129 KPLIPA-DMKKGMIVTNDFHMFRA 151
>gi|228952097|ref|ZP_04114192.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069269|ref|ZP_04202559.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|229078899|ref|ZP_04211451.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|229178126|ref|ZP_04305497.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228605256|gb|EEK62706.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228704313|gb|EEL56747.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|228713756|gb|EEL65641.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|228807629|gb|EEM54153.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + GF+ + Y K H+ I+VL RI++A
Sbjct: 12 ILVVIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 68
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 69 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 128
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 129 KPLIPA-DMKKGMIVTNDFHMFRA 151
>gi|229189814|ref|ZP_04316825.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
gi|228593622|gb|EEK51430.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
Length = 194
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + GF+ + Y K H+ I+VL RI++A
Sbjct: 12 ILVVIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 68
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 69 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 128
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 129 KPLIPA-DMKKGMIVTNDFHMFRA 151
>gi|206970731|ref|ZP_03231683.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206734367|gb|EDZ51537.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 192
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + GF+ + Y K H+ I+VL RI++A
Sbjct: 10 ILVVIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 66
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 67 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 126
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 127 KPLIPA-DMKKGMIVTNDFHMFRA 149
>gi|72162724|ref|YP_290381.1| hypothetical protein Tfu_2325 [Thermobifida fusca YX]
gi|71916456|gb|AAZ56358.1| similar to Uncharacterized membrane protein [Thermobifida fusca YX]
Length = 270
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 5/105 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A EL + E + +SG + + ++ + + I Y +T +
Sbjct: 113 RLETAAELYRSGRVEALLVSGDNSQEHYNETEVMYDYLVAAGVPAVKIARDYAGFSTWES 172
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A V +VT +H+PR + V + P
Sbjct: 173 CVRAR---AVFGVESVTVVTQTFHLPRAVALCRAAGLEVVGVGDP 214
>gi|29832215|ref|NP_826849.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29609333|dbj|BAC73384.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length = 230
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 54/171 (31%), Gaps = 21/171 (12%)
Query: 11 CLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTGE----------PIRIERAFELLEN 59
C++ + F ++ D P VV R++ A +L
Sbjct: 31 CVLALLPATWMFAVAGDRLRTTEDAPRTEVAVVFGAGLWAGEPSPYLAHRLDAAAKLYRA 90
Query: 60 QIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + ++G + D ++ R + + I Y +T + A
Sbjct: 91 GRIEVVLVTGDNSREDYDEPDAMRTYLTRHGVPDGRIVSDYAGFDTWDSCVRAKKIF--- 147
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
+H ++++ +H+ R Q V + D + +++ +
Sbjct: 148 GVNHAVLISQGFHIRRAVALCQAA--GVDSYGIGV---DAKHDATWYYGGT 193
>gi|297559448|ref|YP_003678422.1| hypothetical protein Ndas_0469 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843896|gb|ADH65916.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 201
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L EN E+I +SG + VS+ + + Q + ID T
Sbjct: 60 ARRLDLAVRLYENGRVERIIVSGDNREVSRRETDTMTAYLVAQGVPADRIDADRHGYRTW 119
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+VT +H+PRT +
Sbjct: 120 DTCVRVRDLF---GVREATMVTQSFHLPRTVALARAAGIDA 157
>gi|325474935|gb|EGC78121.1| SanA protein [Treponema denticola F0402]
Length = 226
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA---ECCIDIGYKALNT 103
RIE A L+N+ E++ ISG H D + + QD+ E I + + +T
Sbjct: 69 RDRIEAAVNCLKNKKAERVLISGDHGRKGYDEVNRMRIFMQDIYGTDENLIFMDHAGFST 128
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN--S 161
A ++VT +H R +++ V P + E S
Sbjct: 129 YETMYRAREIFC---IEDAVVVTQAFHTARAVYIGRKLGLDVIAYEAPEVLRYSRETRIS 185
Query: 162 SIFKIKILRV 171
+ + RV
Sbjct: 186 WEIREALARV 195
>gi|66803372|ref|XP_635529.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
gi|60463854|gb|EAL62026.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
Length = 516
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 59 NQIGEKIFISGVHHS---------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
K+ +SG S+ + +I ++ D++ I I + NT NA+
Sbjct: 137 EGGKTKLILSGKGKEEQSDPDKAFNSEAEAMNEIALQNDVSPFDILIENNSSNTAENARF 196
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ +K + IVT D+H+ R+ Q +
Sbjct: 197 TLNYLQKIGVQRLFIVTSDFHVLRSQYIFQTVFP 230
>gi|113475668|ref|YP_721729.1| hypothetical protein Tery_2008 [Trichodesmium erythraeum IMS101]
gi|110166716|gb|ABG51256.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 213
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L +KI ++G + + + + +Q+ I ++ I + +T
Sbjct: 71 ADRVQGAINLYNIGSIQKILMTGDNSTPDYNEVKAMQEYAINHGVSVEDIILDSSGFSTY 130
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ A ++VT +YH+PR +++ V
Sbjct: 131 KSCYRAKEIF---GITQAVLVTQNYHLPRAVYTCRQLGVDV 168
>gi|28898031|ref|NP_797636.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839279|ref|ZP_01991946.1| SanA protein [Vibrio parahaemolyticus AQ3810]
gi|28806245|dbj|BAC59520.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149747214|gb|EDM58202.1| SanA protein [Vibrio parahaemolyticus AQ3810]
Length = 244
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL + ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 81 HRINAAIELYKQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 140
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 141 SIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|332978226|gb|EGK14957.1| hypothetical protein HMPREF9373_0568 [Psychrobacter sp. 1501(2011)]
Length = 312
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 16/99 (16%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++NT NA+ + ++ N V ++T YHM R + + + +P P
Sbjct: 200 ENASMNTCENARFTA---KRLNLQDVYLITDAYHMTRARRQF--ALNGIHALPIP---AA 251
Query: 157 LEENSSIFKIKI----LRVLLIEYLKILLLSIQLSLSTQ 191
L K R + E L + + Q
Sbjct: 252 LPMKKGWLAPKNNAQHSRRTVYE----LAAYARDVFAPQ 286
>gi|15641199|ref|NP_230831.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|153823229|ref|ZP_01975896.1| sanA protein [Vibrio cholerae B33]
gi|227081358|ref|YP_002809909.1| sanA protein [Vibrio cholerae M66-2]
gi|229505220|ref|ZP_04394730.1| SanA protein [Vibrio cholerae BX 330286]
gi|229511110|ref|ZP_04400589.1| SanA protein [Vibrio cholerae B33]
gi|229518229|ref|ZP_04407673.1| SanA protein [Vibrio cholerae RC9]
gi|229529726|ref|ZP_04419116.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229608239|ref|YP_002878887.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254226711|ref|ZP_04920288.1| sanA protein [Vibrio cholerae V51]
gi|254848312|ref|ZP_05237662.1| sanA protein [Vibrio cholerae MO10]
gi|255745594|ref|ZP_05419542.1| SanA protein [Vibrio cholera CIRS 101]
gi|262158332|ref|ZP_06029448.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|298498712|ref|ZP_07008519.1| sanA protein [Vibrio cholerae MAK 757]
gi|9655663|gb|AAF94345.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|125620772|gb|EAZ49129.1| sanA protein [Vibrio cholerae V51]
gi|126519243|gb|EAZ76466.1| sanA protein [Vibrio cholerae B33]
gi|227009246|gb|ACP05458.1| sanA protein [Vibrio cholerae M66-2]
gi|229333500|gb|EEN98986.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229344944|gb|EEO09918.1| SanA protein [Vibrio cholerae RC9]
gi|229351075|gb|EEO16016.1| SanA protein [Vibrio cholerae B33]
gi|229357443|gb|EEO22360.1| SanA protein [Vibrio cholerae BX 330286]
gi|229370894|gb|ACQ61317.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254844017|gb|EET22431.1| sanA protein [Vibrio cholerae MO10]
gi|255736669|gb|EET92066.1| SanA protein [Vibrio cholera CIRS 101]
gi|262029773|gb|EEY48421.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|297543045|gb|EFH79095.1| sanA protein [Vibrio cholerae MAK 757]
gi|327483886|gb|AEA78293.1| SanA protein [Vibrio cholerae LMA3894-4]
Length = 254
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|118580859|ref|YP_902109.1| hypothetical protein Ppro_2446 [Pelobacter propionicus DSM 2379]
gi|118503569|gb|ABL00052.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 206
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 34/207 (16%)
Query: 1 MRYFWYGLFVCLIFFIM-------GFISFIRYVKQMHIPDHPSVSAIVVLTGEP---IRI 50
+R+ + + LI +++ V+ M H A VL G R+
Sbjct: 9 VRWLFIVAALWLILVAFPSVPSVRAWLAAPLVVQNM----HARGDACYVLAGGGALWERL 64
Query: 51 ERAFELLENQIGEKIFI-----SGVHHSV-----SKDILLQKIPIRQDLAECCIDIGYKA 100
+ A +L++ I + G + S+ + + + I +
Sbjct: 65 DAAADLVQMGRVPLILLMRDDSRGQYRFTARTSWSRTQWAVDYLAWRGVPKERIVLLSPV 124
Query: 101 LNTEGNAQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDL 157
G EA A A +++V+ HM RT L +R + V IPY S
Sbjct: 125 EGALGTLAEARAVARHLSKQVKSLVLVSSAPHMRRTVLAFRRSLPSAVGVIPYAATS--- 181
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSI 184
+S + + EYLK+L+ +
Sbjct: 182 -LENSFELYHPIWL---EYLKLLVYLV 204
>gi|294668207|ref|ZP_06733314.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309915|gb|EFE51158.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 194
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 15/169 (8%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISG-- 69
+ +P + A VVL G RI A L ++ K+ +G
Sbjct: 12 VYRSGAAALPQDYNGDAAVVL-GAAAWDSRPSPVFRERINHAIVLYQSGKVRKLAFTGGA 70
Query: 70 VHHS-VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ +S+ + + +RQ + I I + T N + + +IV+
Sbjct: 71 IKPGFMSEAEVGMRYAVRQGVPVHDILIEKTSRTTYENLYNIRPLLNEQGLQNNVIVSDP 130
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
H+ R + + + + P + + F ++ +L Y+
Sbjct: 131 LHLARAGVMAEDLGMEAELSATPTTRYTDRADKIKFWLRETFLLAGYYI 179
>gi|269104339|ref|ZP_06157035.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160979|gb|EEZ39476.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 326
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 22/103 (21%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
++++ LTG R + S+ +++ + + I +
Sbjct: 188 TNSLIFLTGG--RAQNGM--------------------SEAQAMKQWLQERGIDHSDIVL 225
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ NT NAQ I+++ H+ R L
Sbjct: 226 EEQSRNTIENAQYTVPLLHLYAIESATIISNSIHVHRALLAFS 268
>gi|163939519|ref|YP_001644403.1| hypothetical protein BcerKBAB4_1530 [Bacillus weihenstephanensis
KBAB4]
gi|163861716|gb|ABY42775.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 194
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
++Y + +C ++ GF+ + Y K H+ I+VL
Sbjct: 9 IKYILVVIMICAVY--AGFLQYNIY-KHGHMNAIDDADYIIVL--GSKVNGTKPSYSLQY 63
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI++A E L+ +SG +++ + +++ ++Q++AE I + K+ +T+
Sbjct: 64 RIDKAAEYLKLHDKTIAIVSGGQGKGEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDE 123
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N +IVT+D+HM R
Sbjct: 124 NIKFSKPLIPAN-MKKGMIVTNDFHMFRA 151
>gi|121728223|ref|ZP_01681256.1| sanA protein [Vibrio cholerae V52]
gi|262169490|ref|ZP_06037182.1| SanA protein [Vibrio cholerae RC27]
gi|121629474|gb|EAX61900.1| sanA protein [Vibrio cholerae V52]
gi|227013103|gb|ACP09313.1| sanA protein [Vibrio cholerae O395]
gi|262022303|gb|EEY41012.1| SanA protein [Vibrio cholerae RC27]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|229520385|ref|ZP_04409810.1| SanA protein [Vibrio cholerae TM 11079-80]
gi|229342483|gb|EEO07476.1| SanA protein [Vibrio cholerae TM 11079-80]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|83748341|ref|ZP_00945365.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|207723927|ref|YP_002254325.1| hypothetical protein RSMK01443 [Ralstonia solanacearum MolK2]
gi|83724963|gb|EAP72117.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|206589134|emb|CAQ36096.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 265
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 48/176 (27%), Gaps = 33/176 (18%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
W ++ ++ R + P P VVL G ++
Sbjct: 44 WVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQPHGEGAVVLLGGSRKLAAREYA 103
Query: 53 --------AFELLENQIGEK--------IFISGVHHS---VSKDILLQKIPIRQDLAECC 93
L + + +G V + L+ ++
Sbjct: 104 GQGETALSGLSLERTVYAARLAHAARLPVLATGGAPEGRGVPEAELMGRLVADLGQDARW 163
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ ++ TE NA ++ + +VTH +HM R + V P
Sbjct: 164 IEA--RSATTEENAAFSAPMLRAAGIQRIYLVTHYWHMARARRYFEGQGLIVTPAP 217
>gi|262038052|ref|ZP_06011458.1| GdmH [Leptotrichia goodfellowii F0264]
gi|261747919|gb|EEY35352.1| GdmH [Leptotrichia goodfellowii F0264]
Length = 214
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 21/115 (18%)
Query: 40 IVVLTGEP-----------IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPI 85
+VVL G RIE+A E L+ K+ SG +S+ +++ +
Sbjct: 56 VVVL-GGRVRGEKPSRSLYKRIEKAAEYLKEHENIKVVASGGKGKGEEISEAEAIKRELV 114
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH------VLIVTHDYHMPRT 134
+ ++E I K++NT N + ++N + +LIVT+DYH+ R+
Sbjct: 115 KLGISENRIITEDKSVNTMENFKFTLEKIKENESENKEKKFKILIVTNDYHVYRS 169
>gi|291522028|emb|CBK80321.1| Uncharacterized conserved protein [Coprococcus catus GD/7]
Length = 195
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 34 HPSVSAIVVLTG----EPIRIERAFELLENQIGEKIFISGVH------------------ 71
I+V G +P R RA L + + I +SG +
Sbjct: 17 PKKADIIIVP-GNTWPQPAR--RAAALYQAGMAPYIVVSGRYSKGRSAFEGPSCDRECYK 73
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHD 128
++ L + ++ + I +A T NA+ E+ + +I
Sbjct: 74 GPYAAEADFLTDVLMQAGVPGEAILQEREATFTLENAEYIRKMLEEKHLPIKRAIICCQA 133
Query: 129 YHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+H R + + + + ++F+ P ++ + ++ + K L +L E
Sbjct: 134 FHARRCRMYFEYVFQDREIEFLMCPAVTQSISRDNWMESKKGLETVLGE 182
>gi|254292005|ref|ZP_04962784.1| sanA protein [Vibrio cholerae AM-19226]
gi|150422082|gb|EDN14050.1| sanA protein [Vibrio cholerae AM-19226]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|153826664|ref|ZP_01979331.1| sanA protein [Vibrio cholerae MZO-2]
gi|149739526|gb|EDM53754.1| sanA protein [Vibrio cholerae MZO-2]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|21231145|ref|NP_637062.1| hypothetical protein XCC1692 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768847|ref|YP_243609.1| hypothetical protein XC_2539 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991962|ref|YP_001903972.1| hypothetical protein xccb100_2567 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112782|gb|AAM40986.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574179|gb|AAY49589.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733722|emb|CAP51927.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 253
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 17/166 (10%)
Query: 47 PIRIERAFELLEN----QIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI A L KI ISG +S+ ++ +++ + + + +
Sbjct: 93 YGRIVEAARLYRACAATGNDCKIEISGGDARGLGLSEAVVYRRVLLGLGVEAGDLILEPA 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++ T NAQ + +++V+ H+ R EL ++ ++ P + D
Sbjct: 153 SMTTWQNAQFSQPLLRAYRPQRIVLVSSATHLHRA--ELYFLHFGMRTTP---VRSDWLR 207
Query: 160 NSSIFKIKI-----LRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
S + V L EYL I + L + L
Sbjct: 208 ASWSLLPQSYNFTLADVALHEYLGIARYRVYEWLGWNVEATLPGAL 253
>gi|260773007|ref|ZP_05881923.1| SanA protein [Vibrio metschnikovii CIP 69.14]
gi|260612146|gb|EEX37349.1| SanA protein [Vibrio metschnikovii CIP 69.14]
Length = 252
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 28/160 (17%)
Query: 1 MRYFWYGLFVCLIFFIMGF-ISFI-RYVKQMHIPDH--------PSVSAIVVLTGEP--- 47
+R+F G+ + ++ F++ + F H P VVL G
Sbjct: 18 LRWFLRGVALLMLLFLIAVAVIFSIDRWVSWQTQPHIISDINKLPKFDVAVVL-GTSKYL 76
Query: 48 ---------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDI 96
RIE A EL + + +SG H S ++ +++ ++ + + I +
Sbjct: 77 GRTLNDYYLHRIEAAVELYQLNKTDYFLLSGDNAHRSYNEPWTMKRDLLKAGVPDEQIYL 136
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + A + +NF LIVT +H R
Sbjct: 137 DYAGFRTLDSIVRAKRIFDTDNF---LIVTQRFHCERALF 173
>gi|225377113|ref|ZP_03754334.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
gi|225211018|gb|EEG93372.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
Length = 249
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIER 52
W +C IFF+ + + QMH ++ ++VL R++
Sbjct: 65 WIFGILCGIFFLSFLVIEGMVIHQMHAQGEKNLDYVIVL--GAQVHADKPSVVLKYRLDE 122
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L ++G + S+ + + ++ + + I + ++ TE N +
Sbjct: 123 AILYLNENPETVCIVAGGQGKNEPYSEAYGMAQYLMQNGIDKDRILLEDQSKTTEENLRY 182
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + + V I+T+D+HM R
Sbjct: 183 SRKFLPEGA--KVGIITNDFHMFRAL 206
>gi|317056415|ref|YP_004104882.1| hypothetical protein Rumal_1750 [Ruminococcus albus 7]
gi|315448684|gb|ADU22248.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 252
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 10 VCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGE------------PIRIERAF 54
++F I+GF + Q + I+VL R++ A+
Sbjct: 68 AVILFLIVGFTYVGILSAKMYQAQENEPKETDLIIVL--GCKVKGERPSRMLRRRLDAAY 125
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
E ++ + +SG +S+ +++ + + E + + K+ NT N + +
Sbjct: 126 EAMQKHPDALVVLSGGKGSDEKISEAEGMRRYLVEKGADESRLIMEDKSTNTFENIKFSF 185
Query: 112 AWAEKNNF-HHVLIVTHDYHMPRTFL 136
A +K + IVT +H R L
Sbjct: 186 AITDKLGCGRDITIVTDGFHQYRASL 211
>gi|304409588|ref|ZP_07391208.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|307303946|ref|ZP_07583699.1| protein of unknown function DUF218 [Shewanella baltica BA175]
gi|304352106|gb|EFM16504.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|306912844|gb|EFN43267.1| protein of unknown function DUF218 [Shewanella baltica BA175]
Length = 233
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG VS ++ + + + I A +T
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIE 152
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 153 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAKG----LHPEAAATDFIGRDDFWWR 205
Query: 165 ----KIKILRVLLIEYLKILLLSIQL 186
+ + + EY+ L L ++
Sbjct: 206 LTADNLVASQRAIHEYIGRLWLWLKT 231
>gi|153829633|ref|ZP_01982300.1| sanA protein [Vibrio cholerae 623-39]
gi|148874909|gb|EDL73044.1| sanA protein [Vibrio cholerae 623-39]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|111022641|ref|YP_705613.1| hypothetical protein RHA1_ro05676 [Rhodococcus jostii RHA1]
gi|110822171|gb|ABG97455.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 300
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 22/143 (15%)
Query: 23 IRYVKQMHIPDHPSV-----SAIVVLTGEPIRIERA------FELLENQIGE-------K 64
+ P+ +AI+VL + L+ + +
Sbjct: 118 AIRIASFTPPNPLPAIQGPSTAIIVL--GYGLLPDGAMRPELINRLQAALVQSWASPMSP 175
Query: 65 IFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
I ++G + +++ +Q + I ++A +T GNA + A
Sbjct: 176 IIVTGGNPQNGITEAAAMQGWLQSHGVPAQRIHPEHRAGSTVGNALNSVPLARSLGAGGA 235
Query: 123 LIVTHDYHMPRTFLELQRINSTV 145
+IVT H+ R ++ V
Sbjct: 236 IIVTSANHIRRATVDFNVAGLPV 258
>gi|163749752|ref|ZP_02156998.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
gi|161330565|gb|EDQ01523.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
Length = 247
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + + +SG ++ + ++ + + I A +T
Sbjct: 106 RLTEGVRQYQLGKDCILIVSGWGGSASKTPHAKIMAEAAMQLGIPKDRIITFPLAKDTIE 165
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ F +VT HMPR+ Q P + + ++
Sbjct: 166 EAQYLKWDVGSYPFR---LVTSATHMPRSMAIFQ----GQGLSPEAAPTDFITRQGYWWQ 218
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+ +L + EY+ L L+++
Sbjct: 219 LDANNLLSSQRAIHEYVGRLWLTLK 243
>gi|89068295|ref|ZP_01155705.1| hypothetical protein OG2516_02499 [Oceanicola granulosus HTCC2516]
gi|89046212|gb|EAR52270.1| hypothetical protein OG2516_02499 [Oceanicola granulosus HTCC2516]
Length = 212
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 41 VVLTGE----------PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQD 88
VVL G R E A EL + +G VS L+ + +
Sbjct: 42 VVLAGGMNGNQLGDGSRDRAEAAAELYTRGAVGHLHFTGSAARRGVSTAGLMADLARARG 101
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + + + ++ +T NA + +++ H+L+VT +H+ R + + V
Sbjct: 102 VPDGALSVEGESRSTLQNALFSRPAVARHD--HLLLVTEGFHLWRGAASMAWAGTPVD 157
>gi|229525796|ref|ZP_04415201.1| SanA protein [Vibrio cholerae bv. albensis VL426]
gi|229339377|gb|EEO04394.1| SanA protein [Vibrio cholerae bv. albensis VL426]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|153215353|ref|ZP_01949966.1| sanA protein [Vibrio cholerae 1587]
gi|124114796|gb|EAY33616.1| sanA protein [Vibrio cholerae 1587]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|168205486|ref|ZP_02631491.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170663020|gb|EDT15703.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 257
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 28/162 (17%)
Query: 9 FVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL 56
+C+ FI+ G I F IVVL R+++ E
Sbjct: 72 LICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKTIEY 125
Query: 57 LEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
LE +I +SG S+++ ++K + + + I + KA +T N +
Sbjct: 126 LEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKK 185
Query: 113 WAEKNNFH-----HVLIVTHDYHMPRT-FLELQRINSTVQFI 148
E + +L+VT D+H R+ L + V
Sbjct: 186 IIESLSGKPIKDLDILVVTTDFHAMRSNLLAKRNGYDNVDLY 227
>gi|207742828|ref|YP_002259220.1| hypothetical protein RSIPO_01011 [Ralstonia solanacearum IPO1609]
gi|206594222|emb|CAQ61149.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 48/176 (27%), Gaps = 33/176 (18%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIER---- 52
W ++ ++ R + P P VVL G ++
Sbjct: 22 WVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQPHGEGAVVLLGGSRKLAAREYA 81
Query: 53 --------AFELLENQIGEK--------IFISGVHHS---VSKDILLQKIPIRQDLAECC 93
L + + +G V + L+ ++
Sbjct: 82 GQGETALSGLSLERTVYAARLAHAARLPVLATGGAPEGRGVPEAELMGRLVADLGQDARW 141
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ ++ TE NA ++ + +VTH +HM R + V P
Sbjct: 142 IEA--RSATTEENAAFSAPMLRAAGIQRIYLVTHYWHMARARRYFEGQGLIVTPAP 195
>gi|297578787|ref|ZP_06940715.1| sanA protein [Vibrio cholerae RC385]
gi|297536381|gb|EFH75214.1| sanA protein [Vibrio cholerae RC385]
Length = 254
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|322435817|ref|YP_004218029.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163544|gb|ADW69249.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 121
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 15/119 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGEPIRIERA-- 53
R W LFV + I ++F H D I+VL G+ +I+ A
Sbjct: 4 RLGWLFLFVMTLAVIAAMVTF--EAMPTHNTDATHFDTIIVLGWPTAPDGKASKIQTARV 61
Query: 54 ---FELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
L I +SG H + + K+ I + + + + +A+NT N
Sbjct: 62 MEAVRELMAGRAGHIIVSGGAAHSQFVEAEAMAKVAIEAGVPQEDVIVEGRAMNTIQNI 120
>gi|167755531|ref|ZP_02427658.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|237734279|ref|ZP_04564760.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167704470|gb|EDS19049.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|229382509|gb|EEO32600.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 406
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E A + I ++G ++ + + +A+ I + K+ NT
Sbjct: 121 GRLETALASAQKYPNSYILVTGGVKKNGWTEGDRMHDWLVEHGVADNRILVENKSANTAQ 180
Query: 106 NAQEASAWAEKN-NFHHVLIVTHDYHMPR 133
NA+ + + + ++T YH+ R
Sbjct: 181 NAEFSFDILYNHPTIKSISMITSQYHLKR 209
>gi|325677631|ref|ZP_08157283.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
gi|324110599|gb|EGC04763.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
Length = 252
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 20/146 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------PIRIERAF 54
+F+ F G +SF Y Q ++PD IVVL R++ A
Sbjct: 70 AVFLAAGFIYAGILSFKMYRAQENVPDD--TELIVVL--GCQVKGTRPSRMLRRRLDVAL 125
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
E +E +SG +S+ + I + E I + K+ +T N +
Sbjct: 126 EAMEKHPDAVCVVSGGQGYGEKISEAKAMHDYLISKGADESRILMEDKSTSTFENIKFTF 185
Query: 112 AWAEKNNF-HHVLIVTHDYHMPRTFL 136
+K + + IVT +H R L
Sbjct: 186 EMTDKLGYGRDITIVTDGFHQYRASL 211
>gi|182417046|ref|ZP_02948424.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668527|ref|ZP_04528511.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379055|gb|EDT76559.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656875|gb|EEP54431.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 273
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 47 PIRIERAFELLENQIG-EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R++ A E +++ KI +SG +S+ ++K + + + E I + K+
Sbjct: 135 SGRLDAAIEYIKDYNNHSKIVVSGGKGNDEKISEAEAMKKYLVSKGMPEGQILMENKSTT 194
Query: 103 TEGNAQEASAWAEKNNFH-----HVLIVTHDYHMPRTFL 136
T N + + E+++ +V +VT D+H R+ L
Sbjct: 195 TYENFKFSKELIEEDSNKEIDEINVKVVTTDFHAFRSKL 233
>gi|126642093|ref|YP_001085077.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
gi|126387977|gb|ABO12475.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
Length = 114
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 95 DIGYKALNTEGNAQEASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRINSTVQFIPY--P 151
+ +++NT N + +S +K V++VT +YHMPRT + ++ IP P
Sbjct: 14 LLEKRSMNTCENTRFSSLLLQKKGGAPTVMLVTDEYHMPRTRRLF--ALNGIETIPVTAP 71
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ + SI R E LL +I+ L
Sbjct: 72 MPTPLTRWQPSIQNYDHSRRANYE----LLATIRDML 104
>gi|238749759|ref|ZP_04611264.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
gi|238712414|gb|EEQ04627.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
Length = 255
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 41/138 (29%), Gaps = 26/138 (18%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---HHS 73
+ V IVVL G R+ L K+ +G H+
Sbjct: 76 NDPVDYIVVLGGGYTFNPNWAPSANLFANSLPRVTEGIRLYRAHPNAKLVFTGGAAPHNQ 135
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
S Q AE I + + +T A + F L+VT H+PR
Sbjct: 136 SSAKTAAQVAESLGVPAEDIIALD-QPKDTIEEAAAVANLVGDKPF---LLVTSANHLPR 191
Query: 134 TFLELQRINSTVQFIPYP 151
+ + IP P
Sbjct: 192 AMNFF--VAKGLNPIPAP 207
>gi|209515748|ref|ZP_03264611.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
gi|209503775|gb|EEA03768.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
Length = 358
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 17/121 (14%)
Query: 32 PDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG----VHHSVSK 76
D A +VL + R++ A L + + + SG ++S
Sbjct: 4 ADEAQFDAAIVLANQMDAQGQINDETRARMDCAVALYQARRVALVVTSGWAYRNDTAISL 63
Query: 77 DILLQKIPIRQ-DLAECCIDIGYKALNTEGNAQEAS-AWAEKNNFHHVLIVTHDYHMPRT 134
+++ I DL + A +T G+A A + V++VT YH R
Sbjct: 64 AEAMRRYAIEAHDLDGNVVVAQNSARDTVGDAVFTKLRLALPLRWSRVMVVTSTYHGARA 123
Query: 135 F 135
Sbjct: 124 L 124
>gi|198277059|ref|ZP_03209590.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
gi|198269557|gb|EDY93827.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
Length = 220
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI +L + +KI ISG + S S+ L++ I+Q + E I + Y T
Sbjct: 76 YNRINATVDLYKAGKIKKILISGDNRHKSYSEPDLMKGDLIKQGIPEQDIHLDYAGFRTL 135
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ A + +++ +H R
Sbjct: 136 DSVVRA---VKVFGLSEFTVISQKFHNARAI 163
>gi|183179591|ref|ZP_02957802.1| sanA protein [Vibrio cholerae MZO-3]
gi|183013002|gb|EDT88302.1| sanA protein [Vibrio cholerae MZO-3]
Length = 254
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|322385255|ref|ZP_08058902.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
gi|321270879|gb|EFX53792.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
Length = 337
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 54/156 (34%), Gaps = 23/156 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+YG F+ L + I F + + P I++L R+++
Sbjct: 133 LLFYGTFLYLSYIIYAFF-----LNIFPVKKEPQT--IIILGAGLFGDKVPPLLAQRLDK 185
Query: 53 AFELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ E I +SG +S+ + + + + I + K+ T N
Sbjct: 186 GIAIYEKFNRKPVIIVSGGQGDDEWISEAEAMAGYLMEKGVPADSIFLENKSRTTLENLI 245
Query: 109 EASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRIN 142
+ VL+VT+ +H R + ++++
Sbjct: 246 FSKELMLSQGLEQDRVLLVTNSFHALRAGIYMRQVG 281
>gi|227537805|ref|ZP_03967854.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242419|gb|EEI92434.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 187
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGV-----HHSVSKDIL-LQKIPIRQDLAECCIDIGYKA 100
R++ A + ++ +G +++ +K I + + + I G +
Sbjct: 46 KDRLDHACNFYQANPDVRMVCTGGFGAHFNNTEKPHYFYSRKYLIDKGIPDTAILDGPLS 105
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST--VQFIPYP 151
NT + + + + N ++++T D+HM R + +R V F+P P
Sbjct: 106 TNTVEDFKLSKELISQLNPDILIVITSDFHMQRAGILYRRFIDGAKVLFMPAP 158
>gi|239979284|ref|ZP_04701808.1| integral membrane protein [Streptomyces albus J1074]
Length = 254
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 49/178 (27%), Gaps = 19/178 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
+ L ++ F D VV R++
Sbjct: 47 ALLAVMVLCVLALLPAAWMRFSADGHLRSTADVERTEVAVVFGAGLWGEEPSPYLARRLD 106
Query: 52 RAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A EL E E + ++G + + +++ + + + + I Y +T +
Sbjct: 107 AAAELYEAGRTEVVLVTGDNSREEYDEPEAMRRYLVARGVPDHRIVSDYAGFDTWDSCVR 166
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
A ++++ +H+ R + Y I D + S
Sbjct: 167 ARKIF---GVDKAVLISQGFHIHRAVTLCRSAG----LQAYGIGVDDRHDVSWYAGGA 217
>gi|293396759|ref|ZP_06641035.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421023|gb|EFE94276.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 268
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 24/131 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSK--DILL 80
IVVL G R+ L + G K+ +G + +
Sbjct: 82 IVVLGGGYTFNPQWAPSSNLIGNSLPRVTEGVRLYLSHPGAKMVFTGARGANTLSNAETA 141
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + I + + L+TE A + + K F ++VT H+PR +
Sbjct: 142 ARVAASLGVPRSDIVVLDRPLDTEQEAMQVAQLVGKQRF---ILVTSANHLPRAMRFFEA 198
Query: 141 INSTVQFIPYP 151
+Q IP P
Sbjct: 199 --QGLQPIPAP 207
>gi|152994702|ref|YP_001339537.1| hypothetical protein Mmwyl1_0668 [Marinomonas sp. MWYL1]
gi|150835626|gb|ABR69602.1| protein of unknown function DUF218 [Marinomonas sp. MWYL1]
Length = 255
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 24/155 (15%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG--VHHSV 74
V A++VL R+E +L+ ++F+SG +
Sbjct: 86 QQPVDAVIVLGSGHKDLSNTPTVMALGNSALFRLEEGLRILKANPNAQLFVSGYSGQMTE 145
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++++ I + I A +TE A + E N +VT H+ R
Sbjct: 146 PHAEVMRRAAIELGVQPDRIKAFPLAKDTEEEANSMKPYLEGKN---AALVTEASHLKRA 202
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+ ++ ++ IP P + E++
Sbjct: 203 SIFFEQA--GIKIIPAPAMYLGSEKSDWQIDATAA 235
>gi|229085586|ref|ZP_04217821.1| hypothetical protein bcere0022_21960 [Bacillus cereus Rock3-44]
gi|228697734|gb|EEL50484.1| hypothetical protein bcere0022_21960 [Bacillus cereus Rock3-44]
Length = 150
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+E+A L E + I SG H ++ L+KI + + E I KA +T N
Sbjct: 1 MEKAASLYEQGLAPYIVPSGGYKHHVGTTEWDFLRKIGVEHGVPETAILREDKAQHTLEN 60
Query: 107 AQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQ--FIPYPIISHDLEENSS 162
A+ + K + V+IV H R L Q F+ + + + + +
Sbjct: 61 ARLSLEVLHKTGVYPNKVIIVCKAGHSRRALLCYQAEFPKETEFFVAPVVDRYGITKENW 120
Query: 163 I-FKIKILRVLL-IEYL-KILLLSIQLSL 188
+I I R++ +E + K IQ L
Sbjct: 121 FSTEIGISRIMTEVEKIGKYFSPYIQTWL 149
>gi|46198505|ref|YP_004172.1| hypothetical protein TTC0197 [Thermus thermophilus HB27]
gi|55980534|ref|YP_143831.1| hypothetical protein TTHA0565 [Thermus thermophilus HB8]
gi|46196127|gb|AAS80545.1| hypothetical conserved protein [Thermus thermophilus HB27]
gi|55771947|dbj|BAD70388.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 181
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 26/172 (15%)
Query: 38 SAIVVLT----GEP------IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIP 84
IVVL G R++ A L G +I ++G S+ + +
Sbjct: 23 DWIVVLGAAQYGGRPSPALERRLQAALHLFREGRGRRIAVAGGKAPEDLYSEGEVGCRYL 82
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
+ + E + ++ +T N + + + +L+VT H+PR L R+
Sbjct: 83 AARGVPEEALFCETRSRSTYENLL----FLKPHLEGRLLLVTDAPHLPRALF-LARLL-G 136
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
++ YP+ + K + R+ L L L Q S++ +
Sbjct: 137 LEAEGYPVPGN--YPLGYWAKEALYRLWL-----YLGLRPQGVFSSRFNASR 181
>gi|270291245|ref|ZP_06197467.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
gi|270280091|gb|EFA25927.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
Length = 342
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 38/208 (18%)
Query: 7 GLFVCLIFFIMGF------ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
G+ + I + F F ++ Q+ V+ I+ L R+
Sbjct: 129 GVLLVFIGIDVTFTFIFSCYLFYSFLYQIIPIRE-KVNYIITLGAGIRSETVTPLLKGRL 187
Query: 51 ERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++A E Q G FI SG VS+ + K Q + E I + ++ T N
Sbjct: 188 DKALEYFWKQDGNPKFIVSGGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQN 247
Query: 107 AQEAS-----AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ + W +K+ V+ T++YH+ R+ + ++ + P + L
Sbjct: 248 MKFSKQKIEKDW-KKSGVPKVIFATNNYHVLRSAIYARKAGLNANGVGSPTSFYFLPSA- 305
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLS 189
L+ EY+ +L++ + +++
Sbjct: 306 ----------LIREYIALLVIYKKTTIA 323
>gi|33595083|ref|NP_882726.1| hypothetical protein BPP0372 [Bordetella parapertussis 12822]
gi|33565160|emb|CAE35956.1| putative exported protein [Bordetella parapertussis]
Length = 251
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 35/223 (15%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSV----SAIVVLTGE----PIRIE 51
R + V + G + ++ + P +AIV+L RIE
Sbjct: 26 RMLYGLSLVLFLALGCGPIAAWLLDGLQSDYQAKPPIAWGQRNAIVLLGAGTEQAAGRIE 85
Query: 52 RAFELLEN--QIGEK------------IFISGVH---HSVSKDILLQKIPIRQDLAECCI 94
+ + + SG H ++ + + + + +
Sbjct: 86 PGIFSYARIVEAARRYHDCRKAAAQCKLIASGGDAAYHGDAEANVYRDPLVALGVDAADV 145
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
++NT NAQ SA + + V++V+ H+ R+ L P+ +
Sbjct: 146 LPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALYFAYFG----VAATPVRA 201
Query: 155 HDLEENSSIF----KIKILRVLLIEYLKILLLSIQLSLSTQTA 193
L S+ + L EYL I+ + L A
Sbjct: 202 DYLHARRSVVPLSYNFAVADFALHEYLGIVRYHVYNLLGWNPA 244
>gi|331656991|ref|ZP_08357953.1| putative KicA protein [Escherichia coli TA206]
gi|331055239|gb|EGI27248.1| putative KicA protein [Escherichia coli TA206]
Length = 270
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 86 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 145
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 146 TVSTAEVGARVAQSLGVPCEQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 201
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 202 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 238
>gi|242372011|ref|ZP_04817585.1| membrane protein [Staphylococcus epidermidis M23864:W1]
gi|242350280|gb|EES41881.1| membrane protein [Staphylococcus epidermidis M23864:W1]
Length = 263
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 21/150 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPD----HPSVSAIVVLTGE----------PIRIE 51
L++ I F F +FI YV H +V I+VL R+
Sbjct: 56 LALWLSAIAFST-FFAFICYVSWSSAFGSHSFHKNVDLIMVLGAGIFTEQVTPMLAERLN 114
Query: 52 RAFELLENQIGE-KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
RA + +Q +SG +++ + +++ I + + E I + ++ NT N
Sbjct: 115 RAINVYHSQAKPVYFLVSGGQGLDEPITEALAMKRYLIAKGIPEDIILMENQSTNTYTNF 174
Query: 108 QEASAWAEKN--NFHHVLIVTHDYHMPRTF 135
+ E + +L VT +H+ R+
Sbjct: 175 LYSKPIIETHFKRQSQLLCVTSQFHILRSL 204
>gi|283784746|ref|YP_003364611.1| hypothetical protein ROD_09881 [Citrobacter rodentium ICC168]
gi|282948200|emb|CBG87767.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 255
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
V IVVL G R+ L G K+ +G +
Sbjct: 75 ATQKVDYIVVLGGGYTWNPQWAPSSNLLNNSLPRLNEGIRLWRANPGAKLIFTGARALTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + + I + +TE EA+A + L+VT H+
Sbjct: 135 PVSTAEAGARVAESLGVPRSDIIVLDRP-KDTEE---EAAAVKQTIGDTPFLLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ + P ++ D N I
Sbjct: 191 PRAMIFFQQAGTHPLPAPANQMAIDSPLNPWERAIPS 227
>gi|228907351|ref|ZP_04071209.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
gi|228852212|gb|EEM97008.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
Length = 194
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + MGF+ + Y K H+ I+VL RI++A
Sbjct: 12 ILVVIMICAVYMGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 68
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 69 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 128
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 129 KPLIPA-DMKKGMIVTNDFHMFRA 151
>gi|212709800|ref|ZP_03317928.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
gi|212687611|gb|EEB47139.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
Length = 268
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 46/153 (30%), Gaps = 30/153 (19%)
Query: 40 IVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHS--VSKDILL 80
IVVL G R+ L G K+ +G S +S +
Sbjct: 88 IVVLGGGFTYNPDWSPSSNLLSNSLPRVTEGVRLYLQHPGSKLIFTGGKASSPISSAEVA 147
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + + +T+ A E K F L+VT H+PR
Sbjct: 148 SMVAQSLGVPTADTIPLMEPKDTQEEAYEVEKIIGKQPF---LLVTSANHLPRALKMF-- 202
Query: 141 INSTVQFIPYP----IISHDLEENSSIFKIKIL 169
+Q P P +I+ DL N I
Sbjct: 203 TGRGMQPYPAPANQLVITSDL--NPWERYIPSA 233
>gi|218896648|ref|YP_002445059.1| hypothetical protein BCG9842_B3664 [Bacillus cereus G9842]
gi|218542086|gb|ACK94480.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 192
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 19/144 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + + MGF+ + Y K H+ I+VL RI++A
Sbjct: 10 ILVVIMICAVYMGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKA 66
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 67 AEYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFS 126
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 127 KPLIPA-DMKKGMIVTNDFHMFRA 149
>gi|148927911|ref|ZP_01811320.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147886745|gb|EDK72306.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 207
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 22/155 (14%)
Query: 38 SAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG----------VHHSVSK 76
IVVL + R++ A +L I +SG + +++
Sbjct: 17 DLIVVLAQKLHPGWKLAPDLQRRLDHARDLYLADKAPLIAVSGRWVITYEAKGIVPPITE 76
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHMPRTF 135
+++ I Q + I + +T GNA ++ +LIV H+ R
Sbjct: 77 AECMKRYLIEQGVPANAILKEETSQDTIGNAYFIKQLVQERPGLRRLLIVCATPHLRRVC 136
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILR 170
+ + + Y I + NS + ++LR
Sbjct: 137 YIFDHVFGDSRHLSYGGIVPNDFPNSPAKEEEVLR 171
>gi|42527834|ref|NP_972932.1| sanA protein, putative [Treponema denticola ATCC 35405]
gi|41818662|gb|AAS12851.1| sanA protein, putative [Treponema denticola ATCC 35405]
Length = 226
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA---ECCIDIGYKALNT 103
RIE A L+N+ E++ ISG H D + + QD+ E I + + +T
Sbjct: 69 RDRIEAAVNCLKNKKAERVLISGDHGRKGYDEVNRMRIFMQDVYGTDENLIFMDHAGFST 128
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN--S 161
A ++VT +H R +++ V P + E S
Sbjct: 129 YETMYRAREIFC---IEDAVVVTQAFHTARAVYIGRKLGLDVIAYEAPEVLRYSRETRIS 185
Query: 162 SIFKIKILRV 171
+ + RV
Sbjct: 186 WEIREALARV 195
>gi|193070748|ref|ZP_03051683.1| conserved hypothetical protein [Escherichia coli E110019]
gi|192955941|gb|EDV86409.1| conserved hypothetical protein [Escherichia coli E110019]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 46/162 (28%), Gaps = 26/162 (16%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPHEQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-IKILRVL 172
PR + Q+ P ++ D N ++
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPAWLM 232
>gi|297625646|ref|YP_003687409.1| hypothetical protein PFREUD_04300 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921411|emb|CBL55964.1| Hypothetical membrane protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 261
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 14/126 (11%)
Query: 47 PIRIERAFELLENQIGEKIFISG--------VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
R++ A L +I +SG + ++ + +A +
Sbjct: 108 AARLDLAVRLWREGAISRILVSGWAEAPGDAAGVRYDEPAVMADYLVAHGVARGAVLRDP 167
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
L+T +A A + +++VT YH+PR + + H+ +
Sbjct: 168 AGLDTWTSAVRARRL---HGLDAMVVVTQAYHLPRALAAARMAGIDALGVADTTRDHNAK 224
Query: 159 ENSSIF 164
Sbjct: 225 ---WWR 227
>gi|169628519|ref|YP_001702168.1| hypothetical protein MAB_1428 [Mycobacterium abscessus ATCC 19977]
gi|169240486|emb|CAM61514.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 188
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 16/157 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRI 50
R+ + ++ + I+ + P AIV+L R+
Sbjct: 8 RWATAAVVSAVLALCVPVIASAEPLAAGKDFSKP---AIVILGYGLKPDGSMRDKLYQRV 64
Query: 51 ERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ I ++G + VS+ ++ + + I + +A +T NAQ
Sbjct: 65 ATGRAIANMFPNSFIIVTGGNPQNGVSEADQMRNMLVGLGYPSDRIIVEPRANSTVQNAQ 124
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ A++ +++VT+ H R V
Sbjct: 125 FSVPLAKQAGASGIILVTNSTHQQRADRNFADAGGNV 161
>gi|134099149|ref|YP_001104810.1| hypothetical protein SACE_2594 [Saccharopolyspora erythraea NRRL
2338]
gi|291009369|ref|ZP_06567342.1| hypothetical protein SeryN2_33020 [Saccharopolyspora erythraea NRRL
2338]
gi|133911772|emb|CAM01885.1| putative membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 331
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 19/143 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGE----------PIRIERAFELLE- 58
L + + F+ F+ Y + H V +VVL R++R E+ E
Sbjct: 131 VLAYVSLLFVCFLLYAFVYGMLRHRRDVDFVVVLGSGLIGSRVPPLLASRLDRGREVFET 190
Query: 59 ---NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ +SG V + + + + E I I ++ +TE N + + A
Sbjct: 191 AQAKGRDPMLVVSGGQGPGEDVPEARAMADYLGSRGVPEDRILIEDQSRSTEENLRFSKA 250
Query: 113 WAEKNNFH-HVLIVTHDYHMPRT 134
++ L+VT+++H+ R
Sbjct: 251 IMQERRSDYRCLVVTNNFHVMRA 273
>gi|157369964|ref|YP_001477953.1| hypothetical protein Spro_1721 [Serratia proteamaculans 568]
gi|157321728|gb|ABV40825.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 257
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 24/131 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
IVVL G R+ L G K+ +G +
Sbjct: 82 IVVLGGGYTFNPDWAPSSNLIGNSLPRVTEGVRLYLAHPGAKMVFTGAGSPKTLSNAATA 141
Query: 83 IPIRQDL--AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + L I + + L+TE A + S + F ++VT H+PR +
Sbjct: 142 AQVAESLGVPRSDIVLLDRPLDTEQEALQVSKLVGQQPF---ILVTSANHLPRAMRFFEA 198
Query: 141 INSTVQFIPYP 151
+ IP P
Sbjct: 199 --KGLHPIPAP 207
>gi|206581004|ref|YP_002239432.1| hypothetical protein KPK_3613 [Klebsiella pneumoniae 342]
gi|288936282|ref|YP_003440341.1| hypothetical protein Kvar_3429 [Klebsiella variicola At-22]
gi|290510662|ref|ZP_06550032.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
gi|206570062|gb|ACI11838.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288890991|gb|ADC59309.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777378|gb|EFD85376.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 41/151 (27%), Gaps = 28/151 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
+VVL G R+ L + G K+ +G + + +
Sbjct: 82 VVVLGGGYTWNPEWAPSSNLINNSLPRLTEGIRLWQANPGSKMIFTGAAAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +TE AQ F L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSDIIVLDRP-KDTEEEAQAVKRAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIP---YPIISHDLEENSSIFKI 166
+ P + S +I
Sbjct: 198 RHAGLDPLPAPANQLAVTSPLNPWERAIPSP 228
>gi|237784706|ref|YP_002905411.1| hypothetical protein ckrop_0071 [Corynebacterium kroppenstedtii DSM
44385]
gi|237757618|gb|ACR16868.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 192
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 18/168 (10%)
Query: 14 FFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIER--AFELLENQIGEKIFISGV 70
F F+ F H+ P V AIV L G ++ A + + + IS
Sbjct: 31 VFASRFLWF------PHVDKQPAHVDAIVQLGGPHGGVDTYEATRNMAREYTTNLVIS-- 82
Query: 71 HHSVSKDIL-LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI-VTHD 128
K L + +A CI T G AQ AE++ + H+++ T
Sbjct: 83 DPYTEKPDLGARICAPEPGVAVYCIHPDPS--TTRGEAQAIEQLAEEHGWSHIMVYATGK 140
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSS---IFKIKILRVLL 173
YH+ R + + R + + Y S ++ + +VL+
Sbjct: 141 YHVARARMIIGRCYNGDLNVGYHKTSLSWKDTIWEWAYQTGGVAKVLV 188
>gi|320540492|ref|ZP_08040142.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
gi|320029423|gb|EFW11452.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
Length = 264
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L G K+ +G V+ + + + + + L+TE
Sbjct: 109 RVTEGVRLYLTHPGAKLVFTGARGVNTLSNAATAARVTESLGVPSRDILRLDRP-LDTEQ 167
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A + +A F ++VT HMPR + + IP P
Sbjct: 168 EAGQVAALVGNQPF---ILVTSACHMPRAMRFFKA--KGLHPIPAP 208
>gi|307544379|ref|YP_003896858.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
gi|307216403|emb|CBV41673.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
Length = 253
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 9/129 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI--RQDLAECCIDIGYKALNTE 104
R+ A L+ + + +SG + + + + + + + + + Y +T
Sbjct: 74 EGRMRAAASLIHDGRVMHLLLSGDNSTRYYNEPVTMWKDLRGRAVPDSAMTLDYAGFSTF 133
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD----LEEN 160
A L+VT +H+PR + + P D L
Sbjct: 134 DTLARARDVFA---VKRALLVTQSWHLPRALFIADALGIEARGCAAPERPSDSTLRLRAR 190
Query: 161 SSIFKIKIL 169
+ + L
Sbjct: 191 EWVARAATL 199
>gi|167751187|ref|ZP_02423314.1| hypothetical protein EUBSIR_02173 [Eubacterium siraeum DSM 15702]
gi|167655902|gb|EDS00032.1| hypothetical protein EUBSIR_02173 [Eubacterium siraeum DSM 15702]
Length = 201
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 24/166 (14%)
Query: 33 DHPSVSAIVVLTGEPI--RIERAFELLENQIGEKIFISG-----------------VHHS 73
+ V AI +L G + E A EL + + I SG ++
Sbjct: 18 EPQKVDAIFLL-GGSHPEQPEYAAELYRQGLTDWIVPSGGVSVKEEKWHGVRSKAEIYSG 76
Query: 74 VSKD--ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDY 129
+ + ++ + + I K+ +T NA + ++ +IV +
Sbjct: 77 DYRSDCEFFTDVLVKNGVPQTAIIEESKSGHTRDNAFLSRKAVDEKGIMIKSGIIVCKAF 136
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
H R + Q V P+ +++ + + K +L E
Sbjct: 137 HARRCLMLYQMAFPNVDMTVCPVHCYNITKENWYTTEKGTDRVLGE 182
>gi|303240608|ref|ZP_07327123.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302591845|gb|EFL61578.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSV--SAIVVLTGE-----------PIRIERAF 54
+ CL F + F I + + D + +VVL +R+++
Sbjct: 72 IAACLTVFCIIFFILIESIIVLGGVDESNTSVDYVVVLGAGLDSRDKPSGPLRLRLDKCI 131
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ + KI +SG VS+ +++ + + + I + ++ NT N +
Sbjct: 132 DYVSKNPFVKIIVSGGQGFDEEVSEAFAMKEYLVSNGVNQKNIIMEEQSTNTLENIKNTK 191
Query: 112 AWAE---KNNFHHVLIVTHDYHMPRT 134
A E ++VLIVT+ +H+ R
Sbjct: 192 ALIENLPDEKSNNVLIVTNRFHLFRA 217
>gi|91203844|emb|CAJ71497.1| conserver hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 263
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 32/173 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG--VHHSVSKDILL 80
IVVL G R+ L +I +SG V VS +
Sbjct: 93 IVVLAGGHTSDPDIPITSRVSGETLVRLAEGIRLHRLVPESRIVLSGGRVFDPVSGAEAM 152
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + E + + ++ +T A+ H ++VT HM R ++
Sbjct: 153 AELAMALGVEEESLILQSESKDTHDEAKFVKPIV---GNDHFILVTSANHMARAMGMFRK 209
Query: 141 INSTVQFIPYPIISHDLEEN--------SSIFKIKILRVLLIEYLKILLLSIQ 185
S + IP P L+ S + EYL IL ++
Sbjct: 210 --SGMSPIPAPAGHTILKSQTTAPGDFFPSSHGFDKAEQVFYEYLGILWALLR 260
>gi|323947291|gb|EGB43299.1| hypothetical protein EREG_01236 [Escherichia coli H120]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPHEQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|261256154|ref|ZP_05948687.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|28379603|ref|NP_786495.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28272443|emb|CAD65367.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 361
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 38/208 (18%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGE-----------PI 48
++ +F L+ F +GF F Y+ + I I+VL
Sbjct: 141 YFLTVFPNLVIFYLGF-WFYNYLTMLTIYQFNWPRLRQDYIIVLGAGLLDGDRVSPLLGQ 199
Query: 49 RIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RI R + Q + + SG +V + + + I L ++
Sbjct: 200 RIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQS 259
Query: 101 LNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQ---------FIP 149
T N Q + + + VT++YH R + ++ F+P
Sbjct: 260 KTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGARTARFFLP 319
Query: 150 YPIISHDLE---ENSSIFKIKILRVLLI 174
II + N + +L +L++
Sbjct: 320 DAIIREYIAIFVRNKWWHAVAMLGILIV 347
>gi|328865384|gb|EGG13770.1| hypothetical protein DFA_11531 [Dictyostelium fasciculatum]
Length = 586
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
D + I D+ E I + +A NT NA N +I+T D+H+ R
Sbjct: 230 TEADAMRDIITTTYDIDERDIYMDLRATNTAENANNTLTMMLAKNIVRCIIITSDFHLLR 289
Query: 134 TFLELQRINS 143
+ Q +
Sbjct: 290 SQYTFQTVFP 299
>gi|254557746|ref|YP_003064163.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308181833|ref|YP_003925961.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254046673|gb|ACT63466.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308047324|gb|ADN99867.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 361
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 38/208 (18%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGE-----------PI 48
++ +F L+ F +GF F Y+ + I I+VL
Sbjct: 141 YFLTVFPNLVIFYLGF-WFYNYLTMLTIYQFNWPRLRQDYIIVLGAGLLDGDRVSPLLGQ 199
Query: 49 RIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RI R + Q + + SG +V + + + I L ++
Sbjct: 200 RIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQS 259
Query: 101 LNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQ---------FIP 149
T N Q + + + VT++YH R + ++ F+P
Sbjct: 260 KTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGARTARFFLP 319
Query: 150 YPIISHDLE---ENSSIFKIKILRVLLI 174
II + N + +L +L++
Sbjct: 320 DAIIREYIAIFVRNKWWHAVAMLGILIV 347
>gi|218557825|ref|YP_002390738.1| hypothetical protein ECS88_0948 [Escherichia coli S88]
gi|218364594|emb|CAR02280.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 259
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLDVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|229827993|ref|ZP_04454062.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
gi|229792587|gb|EEP28701.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
Length = 203
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 14/146 (9%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--------PIRIERAF 54
Y + L V G + F Q +++L RI A
Sbjct: 9 YILFSLLVFAFAIATGTMLFAARRLQPDRITGHIPDTLILL--GCKIRTRSIESRIRTAA 66
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ +++ SG +S+ +++ Q + + + + NT N +
Sbjct: 67 DWMKDHPDTICICSGGQGKDEDISEAEYMKEGLTAQGIDWKRLPMERNSTNTRENLALSH 126
Query: 112 AWAEKNNF-HHVLIVTHDYHMPRTFL 136
+I+T +H R
Sbjct: 127 RVIASLGRGDSAIIITSAFHCYRAVF 152
>gi|258626405|ref|ZP_05721252.1| Protein sanA [Vibrio mimicus VM603]
gi|262171782|ref|ZP_06039460.1| SanA protein [Vibrio mimicus MB-451]
gi|258581457|gb|EEW06359.1| Protein sanA [Vibrio mimicus VM603]
gi|261892858|gb|EEY38844.1| SanA protein [Vibrio mimicus MB-451]
Length = 233
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 71 NRIDAAIVLYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 130
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 131 SIVRAKQIFDTDNF---LIITQRFHCERALF 158
>gi|170726063|ref|YP_001760089.1| hypothetical protein Swoo_1709 [Shewanella woodyi ATCC 51908]
gi|169811410|gb|ACA85994.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 264
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ K+ +SG ++S ++ + I + I A +T
Sbjct: 109 RLSEGIRQYNLGSDCKLVVSGWSGGEGTLSHAEVMAEAAIELGIDNERIIRFPLARDTIE 168
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
A E W + + +VT HMPR+ Q + P + + ++
Sbjct: 169 EA-EFLKW--EIGNYPFRLVTSASHMPRSMAIFQ----NIGLAPQAAPTDFMTRQGRWWR 221
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+ + + EYL L I+
Sbjct: 222 LDAENLWSSQRAIHEYLGRLWFKIK 246
>gi|324113749|gb|EGC07724.1| hypothetical protein ERIG_02167 [Escherichia fergusonii B253]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|302528814|ref|ZP_07281156.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302437709|gb|EFL09525.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 218
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
+R +G+ + L+ I G + V + + D AIVVL G R
Sbjct: 16 VRRIVFGVVLALVAVIGGTAFRVWQVAREN--DRTPADAIVVL-GAAQYNGKPSEIFTAR 72
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI----DIGY-KALNTE 104
+E+A +L + + + +G S+D + + L + + + + +T
Sbjct: 73 LEKARQLYTEGVAKTVITAGGKK--SRDNFTEATAGARWLTKHGVPASATLPVGEGNDTL 130
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + + + V++V+ +H R+
Sbjct: 131 RSLRAVADQVKARGWRSVVLVSDPWHSYRS 160
>gi|315126918|ref|YP_004068921.1| enzyme [Pseudoalteromonas sp. SM9913]
gi|315015432|gb|ADT68770.1| enzyme [Pseudoalteromonas sp. SM9913]
Length = 258
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 8/129 (6%)
Query: 49 RIERAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
R+ L ++ +SG + V+ L+ K I + + I A++T A
Sbjct: 111 RLVEGMRLANIYPHAQLIVSGGGYEKVTNSALMYKTAISLGINKNRIVQNPNAMDT---A 167
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-- 165
QEA A K + V +VT HMPR + IP H+ +
Sbjct: 168 QEAKLLASKLVDYKVALVTSVSHMPRAKNLFNA--QGINVIPASTDYHNFAAFPWYKQLI 225
Query: 166 IKILRVLLI 174
+L++
Sbjct: 226 PNAKALLVV 234
>gi|294499692|ref|YP_003563392.1| hypothetical protein BMQ_2936 [Bacillus megaterium QM B1551]
gi|294349629|gb|ADE69958.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 187
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 34/199 (17%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP------IRI 50
M Y + G V I ISF Y H ++VL G+ R+
Sbjct: 5 MIYTFIGSLVLYIVI----ISFCMYQTAHKSVPHN-ADYVLVLGSKVDGDQMSPSLKERV 59
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L+ K+ ++G +S+ + ++ + + I ++ +T N
Sbjct: 60 KTALSYLQAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIKEDQSTSTFENF 119
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + V++V++D+H+ R + +R V YP+
Sbjct: 120 TFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDV----YPL---------GAKTPN 165
Query: 168 ILRV--LLIEYLKILLLSI 184
+++ EY IL +
Sbjct: 166 SIKLQAYFREYAAILKTWL 184
>gi|262165455|ref|ZP_06033192.1| SanA protein [Vibrio mimicus VM223]
gi|262025171|gb|EEY43839.1| SanA protein [Vibrio mimicus VM223]
Length = 253
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 91 NRIDAAIVLYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPTENISLDYAGFRTLD 150
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 151 SIVRAKQIFDTDNF---LIITQRFHCERALF 178
>gi|312194062|ref|YP_004014123.1| hypothetical protein FraEuI1c_0165 [Frankia sp. EuI1c]
gi|311225398|gb|ADP78253.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 203
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V I FI ++ I + +AI++L G R +RA EL +
Sbjct: 44 ALVVLFILFIGATLAIIVFPPTDRPA---RANAILMLGGAGDRRDRALELARAGYAPVLA 100
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+S + + P ++ C T+G A+EA A + + ++ VT
Sbjct: 101 LSTPN--------ARHCPTVPNVKVICFRPDP--FTTQGEAREAGRLAARYGWTRMIFVT 150
Query: 127 HDYHMPRTFLELQR 140
R L + R
Sbjct: 151 DRSQNVRARLRIDR 164
>gi|331682427|ref|ZP_08383046.1| putative KicA protein [Escherichia coli H299]
gi|331080058|gb|EGI51237.1| putative KicA protein [Escherichia coli H299]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|162454961|ref|YP_001617328.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
gi|161165543|emb|CAN96848.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
Length = 208
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 58/195 (29%), Gaps = 20/195 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQ--MHIPDHPSVSAIVVLTGEPI-------------RIE 51
G+ + F + F + + PD A+V L R
Sbjct: 15 GVIGLMAFAVAAFTPVAAPLDRWMASAPDAGQADAVVAL--GADVDPDGRLPEDSLRRAV 72
Query: 52 RAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
A L + + G + S+ ++ R + + + L T AQ +
Sbjct: 73 EAVALYREGRAPLVLMLGSRNGPASEAESRARLAQRLGVPASALLTEPRGLTTAVEAQRS 132
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR 170
+ +L+VT + + R +R V P P S ++ +
Sbjct: 133 AELLLPRGARRILLVTGAHRIARARRLFERAGFEVLAAPVPEGSPASNIPG--ERLSAIG 190
Query: 171 VLLIEYLKILLLSIQ 185
LL E L ++
Sbjct: 191 RLLQELAARALSRLR 205
>gi|323159547|gb|EFZ45527.1| hypothetical protein ECE128010_4163 [Escherichia coli E128010]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|301023042|ref|ZP_07186851.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397248|gb|EFJ80786.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|160874624|ref|YP_001553940.1| hypothetical protein Sbal195_1507 [Shewanella baltica OS195]
gi|160860146|gb|ABX48680.1| protein of unknown function DUF218 [Shewanella baltica OS195]
Length = 248
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG S ++ K + + + I A +T
Sbjct: 108 RLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIE 167
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 168 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAKG----LHPEAAPTDFIGRDDFWWR 220
Query: 165 ----KIKILRVLLIEYLKILLLSIQL 186
+ + + EY+ L L ++
Sbjct: 221 LTADNLVASQRAIHEYIGRLWLWLKT 246
>gi|26246946|ref|NP_752986.1| hypothetical protein c1061 [Escherichia coli CFT073]
gi|110641117|ref|YP_668847.1| hypothetical protein ECP_0931 [Escherichia coli 536]
gi|191172139|ref|ZP_03033683.1| conserved hypothetical protein [Escherichia coli F11]
gi|215486045|ref|YP_002328476.1| hypothetical protein E2348C_0913 [Escherichia coli O127:H6 str.
E2348/69]
gi|218688763|ref|YP_002396975.1| hypothetical protein ECED1_0950 [Escherichia coli ED1a]
gi|227884115|ref|ZP_04001920.1| inner membrane protein [Escherichia coli 83972]
gi|300978421|ref|ZP_07174269.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047819|ref|ZP_07194871.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|312969014|ref|ZP_07783221.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|26107346|gb|AAN79529.1|AE016758_133 Hypothetical protein ycbC [Escherichia coli CFT073]
gi|110342709|gb|ABG68946.1| putative membrane protein [Escherichia coli 536]
gi|190907666|gb|EDV67261.1| conserved hypothetical protein [Escherichia coli F11]
gi|215264117|emb|CAS08461.1| conserved predicted inner membrane protein [Escherichia coli
O127:H6 str. E2348/69]
gi|218426327|emb|CAR07152.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|227838867|gb|EEJ49333.1| inner membrane protein [Escherichia coli 83972]
gi|300300311|gb|EFJ56696.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409663|gb|EFJ93201.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552759|gb|ADN45534.1| conserved inner membrane protein [Escherichia coli ABU 83972]
gi|312286416|gb|EFR14329.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|315291218|gb|EFU50578.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|320196586|gb|EFW71209.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli WV_060327]
gi|323967167|gb|EGB62591.1| hypothetical protein ERJG_01450 [Escherichia coli M863]
gi|323976693|gb|EGB71781.1| hypothetical protein ERFG_02482 [Escherichia coli TW10509]
gi|324009859|gb|EGB79078.1| hypothetical protein HMPREF9532_00410 [Escherichia coli MS 57-2]
gi|324012947|gb|EGB82166.1| hypothetical protein HMPREF9533_03015 [Escherichia coli MS 60-1]
gi|327253710|gb|EGE65339.1| hypothetical protein ECSTEC7V_1135 [Escherichia coli STEC_7v]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|331646185|ref|ZP_08347288.1| putative KicA protein [Escherichia coli M605]
gi|330910700|gb|EGH39210.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli AA86]
gi|331044937|gb|EGI17064.1| putative KicA protein [Escherichia coli M605]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|329935832|ref|ZP_08285635.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
gi|329304675|gb|EGG48550.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
Length = 336
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 39/206 (18%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIR 49
M Y F+ L F + G + +++ +VVL R
Sbjct: 129 MALAGYIAFLFLCFLVYGAMYGRLRIRR-------RADYVVVLGSGLIGGTTVPPLLAGR 181
Query: 50 IERA----FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
++RA L + SG V + + + Q I+ ++
Sbjct: 182 LDRARKEHARLSRKGRRPVMLTSGGQGPDEKVPESHAMADYLVAQGFPADLIEREDRSTT 241
Query: 103 TEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
T+ N + A E+ N + V+ VT++YH+ R + +R I P
Sbjct: 242 TDENLTFSKALMERANPDYRCVI-VTNNYHVFRAAVTARRTGVRGHVIGAP--------T 292
Query: 161 SSIFKIKILRVLLIEYLKILLLSIQL 186
++ F ++ E++ +L+ +
Sbjct: 293 AAYFWPSA---MIREFVALLVAYRRT 315
>gi|326796792|ref|YP_004314612.1| hypothetical protein Marme_3563 [Marinomonas mediterranea MMB-1]
gi|326547556|gb|ADZ92776.1| protein of unknown function DUF218 [Marinomonas mediterranea MMB-1]
Length = 255
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E +L ++F+SG +L++ I +A I A +TE
Sbjct: 107 RLEEGLRILRANPSARLFVSGYGAGGKTPHAEILKQAAIELGIAPTRIITFPLAKDTEDE 166
Query: 107 AQEASAWA---EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
A+ +++ ++ + + +VT H+ R + + +P P
Sbjct: 167 ARMMASFLKDDKERTNNRIALVTEASHLKRAMRFYRN--EDINTLPAPAF 214
>gi|325576625|ref|ZP_08147343.1| transporter [Haemophilus parainfluenzae ATCC 33392]
gi|325161188|gb|EGC73303.1| transporter [Haemophilus parainfluenzae ATCC 33392]
Length = 387
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ I ++G ++ L+++ I + + I A +T
Sbjct: 237 QRLEKTLEIANQNPDALIIVTGGVPQNNKTEGDLMKQWLIEKGVDASRIYSDNYARSTVE 296
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA + K+ H ++++ H+ R E+
Sbjct: 297 NALFSRYSLAKHKIKHAVLISSGSHVRRGQALFEIA 332
>gi|281490953|ref|YP_003352933.1| hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
gi|281374711|gb|ADA64231.1| Hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
Length = 194
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L +N KI +SG VS+ ++ I + I KA +T
Sbjct: 62 QERLDAALLLAKNNPQAKIIVSGAKGADEPVSEAFSMKNYLISHHIRADRIISEDKAGDT 121
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + + +IVT D+H+ R
Sbjct: 122 AENIAYSKKYFDGKT----VIVTSDFHLYRALY 150
>gi|258621650|ref|ZP_05716681.1| Protein sanA [Vibrio mimicus VM573]
gi|258585881|gb|EEW10599.1| Protein sanA [Vibrio mimicus VM573]
Length = 253
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 91 NRIDAAIVLYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 150
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 151 SIVRAKQIFDTDNF---LIITQRFHCERALF 178
>gi|228920427|ref|ZP_04083772.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839057|gb|EEM84353.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 194
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+ + GF+ + Y K H+ I+VL RI++A E
Sbjct: 15 VIMICAVYAGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEY 71
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L++ +SG +S+ + +++ I+Q++ E I + K+ +T+ N +
Sbjct: 72 LKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIVEDRIIMEDKSTSTDENITFSKPL 131
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 132 IPA-DMKKGMIVTNDFHMFRA 151
>gi|169343962|ref|ZP_02864953.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169297870|gb|EDS79965.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 262
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 27/150 (18%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGYDGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT 134
+ E + +L+VT D+H R+
Sbjct: 183 SKKIIENLSGKPIKDLDILVVTTDFHAMRS 212
>gi|15800781|ref|NP_286795.1| hypothetical protein Z1267 [Escherichia coli O157:H7 EDL933]
gi|15830257|ref|NP_309030.1| hypothetical protein ECs1003 [Escherichia coli O157:H7 str. Sakai]
gi|16128887|ref|NP_415440.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|89107770|ref|AP_001550.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|91210021|ref|YP_540007.1| hypothetical protein UTI89_C0991 [Escherichia coli UTI89]
gi|117623138|ref|YP_852051.1| hypothetical protein APECO1_32 [Escherichia coli APEC O1]
gi|157155611|ref|YP_001462138.1| hypothetical protein EcE24377A_1017 [Escherichia coli E24377A]
gi|157160441|ref|YP_001457759.1| hypothetical protein EcHS_A1027 [Escherichia coli HS]
gi|168751183|ref|ZP_02776205.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757012|ref|ZP_02782019.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168762943|ref|ZP_02787950.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168769915|ref|ZP_02794922.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776227|ref|ZP_02801234.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168784117|ref|ZP_02809124.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787349|ref|ZP_02812356.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168801395|ref|ZP_02826402.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170020678|ref|YP_001725632.1| hypothetical protein EcolC_2676 [Escherichia coli ATCC 8739]
gi|170080578|ref|YP_001729898.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170681104|ref|YP_001744250.1| hypothetical protein EcSMS35_2201 [Escherichia coli SMS-3-5]
gi|188494945|ref|ZP_03002215.1| conserved hypothetical protein [Escherichia coli 53638]
gi|194438715|ref|ZP_03070802.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208808261|ref|ZP_03250598.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208816346|ref|ZP_03257525.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822106|ref|ZP_03262425.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397397|ref|YP_002269592.1| hypothetical protein ECH74115_1080 [Escherichia coli O157:H7 str.
EC4115]
gi|217325067|ref|ZP_03441151.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218704347|ref|YP_002411866.1| hypothetical protein ECUMN_1113 [Escherichia coli UMN026]
gi|237707092|ref|ZP_04537573.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238900178|ref|YP_002925974.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774051|ref|YP_003036882.1| hypothetical protein ECBD_2675 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161034|ref|YP_003044142.1| hypothetical protein ECB_00924 [Escherichia coli B str. REL606]
gi|254792119|ref|YP_003076956.1| hypothetical protein ECSP_1024 [Escherichia coli O157:H7 str.
TW14359]
gi|256023379|ref|ZP_05437244.1| hypothetical protein E4_08394 [Escherichia sp. 4_1_40B]
gi|261227423|ref|ZP_05941704.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|291281921|ref|YP_003498739.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|293404225|ref|ZP_06648219.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|297516352|ref|ZP_06934738.1| hypothetical protein EcolOP_01862 [Escherichia coli OP50]
gi|298380005|ref|ZP_06989610.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|300901650|ref|ZP_07119710.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300929615|ref|ZP_07145077.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300937735|ref|ZP_07152536.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300949717|ref|ZP_07163696.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955432|ref|ZP_07167806.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|301022414|ref|ZP_07186297.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301643440|ref|ZP_07243488.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306812627|ref|ZP_07446820.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307137549|ref|ZP_07496905.1| hypothetical protein EcolH7_05381 [Escherichia coli H736]
gi|312971048|ref|ZP_07785227.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331641446|ref|ZP_08342581.1| putative KicA protein [Escherichia coli H736]
gi|331662333|ref|ZP_08363256.1| putative KicA protein [Escherichia coli TA143]
gi|77416806|sp|P0AB02|YCBC_ECO57 RecName: Full=Uncharacterized protein ycbC
gi|77416807|sp|P0AB01|YCBC_ECOLI RecName: Full=Uncharacterized protein ycbC
gi|12514089|gb|AAG55405.1|AE005281_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1787150|gb|AAC74006.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|4062491|dbj|BAA35666.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|13360462|dbj|BAB34426.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|91071595|gb|ABE06476.1| probable membrane protein [Escherichia coli UTI89]
gi|115512262|gb|ABJ00337.1| YcbC [Escherichia coli APEC O1]
gi|157066121|gb|ABV05376.1| conserved hypothetical protein [Escherichia coli HS]
gi|157077641|gb|ABV17349.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169755606|gb|ACA78305.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169888413|gb|ACB02120.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170518822|gb|ACB17000.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187768343|gb|EDU32187.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188014720|gb|EDU52842.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188490144|gb|EDU65247.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188998655|gb|EDU67641.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355905|gb|EDU74324.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361104|gb|EDU79523.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366790|gb|EDU85206.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372700|gb|EDU91116.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189376425|gb|EDU94841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|194422347|gb|EDX38347.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728062|gb|EDZ77663.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732994|gb|EDZ81682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208737591|gb|EDZ85274.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158797|gb|ACI36230.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209774788|gb|ACI85706.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774790|gb|ACI85707.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774792|gb|ACI85708.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774794|gb|ACI85709.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774796|gb|ACI85710.1| hypothetical protein ECs1003 [Escherichia coli]
gi|217321288|gb|EEC29712.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218431444|emb|CAR12322.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222032651|emb|CAP75390.1| Uncharacterized protein ycbC [Escherichia coli LF82]
gi|226898302|gb|EEH84561.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238860178|gb|ACR62176.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376735|emb|CAQ31448.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325095|gb|ACT29697.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972935|gb|ACT38606.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977149|gb|ACT42819.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|254591519|gb|ACT70880.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|260449934|gb|ACX40356.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281178051|dbj|BAI54381.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920771|emb|CBG33834.1| putative membrane protein [Escherichia coli 042]
gi|290761794|gb|ADD55755.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|291428811|gb|EFF01836.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|298279703|gb|EFI21211.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|299881255|gb|EFI89466.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300317655|gb|EFJ67439.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|300354943|gb|EFJ70813.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300450898|gb|EFK14518.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457242|gb|EFK20735.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462452|gb|EFK25945.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|301078154|gb|EFK92960.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305853390|gb|EFM53829.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307627653|gb|ADN71957.1| hypothetical protein UM146_12950 [Escherichia coli UM146]
gi|309701196|emb|CBJ00496.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310336809|gb|EFQ01976.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312945440|gb|ADR26267.1| hypothetical protein NRG857_04195 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135568|dbj|BAJ42727.1| hypothetical protein ECDH1ME8569_0871 [Escherichia coli DH1]
gi|315287553|gb|EFU46959.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315619114|gb|EFU99694.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320192594|gb|EFW67235.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
EC1212]
gi|320637788|gb|EFX07580.1| hypothetical protein ECO5101_23325 [Escherichia coli O157:H7 str.
G5101]
gi|320642913|gb|EFX12114.1| hypothetical protein ECO9389_03076 [Escherichia coli O157:H- str.
493-89]
gi|320648370|gb|EFX17025.1| hypothetical protein ECO2687_19186 [Escherichia coli O157:H- str. H
2687]
gi|320653686|gb|EFX21760.1| hypothetical protein ECO7815_15513 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659831|gb|EFX27387.1| hypothetical protein ECO5905_25023 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664300|gb|EFX31451.1| hypothetical protein ECOSU61_01678 [Escherichia coli O157:H7 str.
LSU-61]
gi|323190740|gb|EFZ76009.1| hypothetical protein ECRN5871_0979 [Escherichia coli RN587/1]
gi|323938026|gb|EGB34288.1| hypothetical protein ERCG_00752 [Escherichia coli E1520]
gi|323942836|gb|EGB39001.1| hypothetical protein ERDG_00704 [Escherichia coli E482]
gi|323953372|gb|EGB49238.1| hypothetical protein ERKG_00257 [Escherichia coli H252]
gi|323958225|gb|EGB53934.1| hypothetical protein ERLG_00664 [Escherichia coli H263]
gi|323962912|gb|EGB58486.1| hypothetical protein ERGG_00660 [Escherichia coli H489]
gi|323973205|gb|EGB68397.1| hypothetical protein ERHG_00864 [Escherichia coli TA007]
gi|326338185|gb|EGD62014.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1125]
gi|326346162|gb|EGD69900.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1044]
gi|331038244|gb|EGI10464.1| putative KicA protein [Escherichia coli H736]
gi|331060755|gb|EGI32719.1| putative KicA protein [Escherichia coli TA143]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|326939331|gb|AEA15227.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 192
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPI------------RIERAF 54
+ +I + F++Y H + S A I+VL RI++A
Sbjct: 10 ILVVIMICAVYAGFLQYHIYKHGHMNASEDAEYIIVL--GSKVNGTKPSYSLQYRIDKAA 67
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 68 EYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSK 127
Query: 112 AWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 128 PLIPA-DMKKGMIVTNDFHMFRA 149
>gi|300921042|ref|ZP_07137429.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300412033|gb|EFJ95343.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGLAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|228938827|ref|ZP_04101427.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971708|ref|ZP_04132329.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978317|ref|ZP_04138694.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228781334|gb|EEM29535.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228787798|gb|EEM35756.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820676|gb|EEM66701.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 194
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPI------------RIERAF 54
+ +I + F++Y H + S A I+VL RI++A
Sbjct: 12 ILVVIMICAVYAGFLQYHIYKHGHMNASEDAEYIIVL--GSKVNGTKPSYSLQYRIDKAA 69
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
E L++ +SG +S+ + +++ I+Q++AE I + K+ +T+ N +
Sbjct: 70 EYLKSHEKTIAIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSK 129
Query: 112 AWAEKNNFHHVLIVTHDYHMPRT 134
+ +IVT+D+HM R
Sbjct: 130 PLIPA-DMKKGMIVTNDFHMFRA 151
>gi|218700561|ref|YP_002408190.1| hypothetical protein ECIAI39_2227 [Escherichia coli IAI39]
gi|331672456|ref|ZP_08373246.1| putative KicA protein [Escherichia coli TA280]
gi|218370547|emb|CAR18354.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|331070362|gb|EGI41727.1| putative KicA protein [Escherichia coli TA280]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|297193393|ref|ZP_06910791.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718291|gb|EDY62199.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 200
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 12/128 (9%)
Query: 55 ELLENQIGEKIFISGVHHSVS-------KDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+L + + +G + + ++ + + I + +A NT N
Sbjct: 23 DLYRQGMAPVVVFTGATSRTTHDRMPRGEAEHYRERAVELGVPNDAILVEPRARNTGENI 82
Query: 108 QEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ + A E+ VL+V+ Y R + +++ +F+ S + I
Sbjct: 83 RFSRALLEEQGIPVSSVLLVSKPYEERRAYATARKLWPEAEFVS---ASAPMTLADHIRS 139
Query: 166 IKILRVLL 173
I R+++
Sbjct: 140 IGDARLVV 147
>gi|82777557|ref|YP_403906.1| hypothetical protein SDY_2338 [Shigella dysenteriae Sd197]
gi|309787791|ref|ZP_07682401.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331651940|ref|ZP_08352959.1| putative KicA protein [Escherichia coli M718]
gi|81241705|gb|ABB62415.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924190|gb|EFP69687.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331050218|gb|EGI22276.1| putative KicA protein [Escherichia coli M718]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|30062454|ref|NP_836625.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56479770|ref|NP_706838.2| hypothetical protein SF0916 [Shigella flexneri 2a str. 301]
gi|110804928|ref|YP_688448.1| hypothetical protein SFV_0921 [Shigella flexneri 5 str. 8401]
gi|191166971|ref|ZP_03028794.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193064658|ref|ZP_03045737.1| conserved hypothetical protein [Escherichia coli E22]
gi|194428374|ref|ZP_03060915.1| conserved hypothetical protein [Escherichia coli B171]
gi|209918170|ref|YP_002292254.1| hypothetical protein ECSE_0979 [Escherichia coli SE11]
gi|218694393|ref|YP_002402060.1| hypothetical protein EC55989_0965 [Escherichia coli 55989]
gi|256020952|ref|ZP_05434817.1| hypothetical protein ShiD9_18687 [Shigella sp. D9]
gi|260843169|ref|YP_003220947.1| hypothetical protein ECO103_0964 [Escherichia coli O103:H2 str.
12009]
gi|260867092|ref|YP_003233494.1| hypothetical protein ECO111_0988 [Escherichia coli O111:H- str.
11128]
gi|300816976|ref|ZP_07097195.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300902921|ref|ZP_07120866.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|301302471|ref|ZP_07208602.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|307311693|ref|ZP_07591333.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309795095|ref|ZP_07689515.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|332282175|ref|ZP_08394588.1| conserved hypothetical protein [Shigella sp. D9]
gi|30040700|gb|AAP16431.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56383321|gb|AAN42545.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110614476|gb|ABF03143.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|190902965|gb|EDV62691.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192927715|gb|EDV82330.1| conserved hypothetical protein [Escherichia coli E22]
gi|194413589|gb|EDX29870.1| conserved hypothetical protein [Escherichia coli B171]
gi|209911429|dbj|BAG76503.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351125|emb|CAU96829.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|257758316|dbj|BAI29813.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257763448|dbj|BAI34943.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281600279|gb|ADA73263.1| hypothetical protein SFxv_0991 [Shigella flexneri 2002017]
gi|300405063|gb|EFJ88601.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|300530328|gb|EFK51390.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842310|gb|EFK70070.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|306908248|gb|EFN38747.1| protein of unknown function DUF218 [Escherichia coli W]
gi|308121399|gb|EFO58661.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|313650839|gb|EFS15240.1| hypothetical protein SF2457T_0842 [Shigella flexneri 2a str. 2457T]
gi|315060205|gb|ADT74532.1| conserved inner membrane protein [Escherichia coli W]
gi|315257961|gb|EFU37929.1| probable membrane protein [Escherichia coli MS 85-1]
gi|315296223|gb|EFU55530.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|320202316|gb|EFW76887.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli EC4100B]
gi|323174979|gb|EFZ60594.1| hypothetical protein ECLT68_0536 [Escherichia coli LT-68]
gi|323175457|gb|EFZ61052.1| hypothetical protein ECOK1180_5741 [Escherichia coli 1180]
gi|323379235|gb|ADX51503.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|324019071|gb|EGB88290.1| hypothetical protein HMPREF9542_02266 [Escherichia coli MS 117-3]
gi|324117215|gb|EGC11123.1| hypothetical protein ERBG_02930 [Escherichia coli E1167]
gi|332104527|gb|EGJ07873.1| conserved hypothetical protein [Shigella sp. D9]
gi|332759007|gb|EGJ89317.1| hypothetical protein SF434370_1174 [Shigella flexneri 4343-70]
gi|332760112|gb|EGJ90410.1| hypothetical protein SF274771_1134 [Shigella flexneri 2747-71]
gi|332762691|gb|EGJ92954.1| hypothetical protein SFK671_1086 [Shigella flexneri K-671]
gi|332767869|gb|EGJ98059.1| hypothetical protein SF293071_1100 [Shigella flexneri 2930-71]
gi|333007013|gb|EGK26508.1| hypothetical protein SFK218_1285 [Shigella flexneri K-218]
gi|333008904|gb|EGK28364.1| hypothetical protein SFK272_1422 [Shigella flexneri K-272]
gi|333020002|gb|EGK39273.1| hypothetical protein SFK304_1250 [Shigella flexneri K-304]
gi|333020214|gb|EGK39484.1| hypothetical protein SFK227_1149 [Shigella flexneri K-227]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|218553507|ref|YP_002386420.1| hypothetical protein ECIAI1_0961 [Escherichia coli IAI1]
gi|293433217|ref|ZP_06661645.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300823660|ref|ZP_07103787.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331667297|ref|ZP_08368162.1| putative KicA protein [Escherichia coli TA271]
gi|331676708|ref|ZP_08377404.1| putative KicA protein [Escherichia coli H591]
gi|218360275|emb|CAQ97825.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324036|gb|EFE63458.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300523860|gb|EFK44929.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331065653|gb|EGI37546.1| putative KicA protein [Escherichia coli TA271]
gi|331075397|gb|EGI46695.1| putative KicA protein [Escherichia coli H591]
Length = 259
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPHEQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|323185374|gb|EFZ70738.1| hypothetical protein ECOK1357_1327 [Escherichia coli 1357]
Length = 248
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 64 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGIAKTN 123
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 124 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 179
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 180 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 216
>gi|197265841|ref|ZP_03165915.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197244096|gb|EDY26716.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 258
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|218187877|gb|EEC70304.1| hypothetical protein OsI_01148 [Oryza sativa Indica Group]
Length = 247
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVKYLLLSGDNAQQSYNEPMTMRRDLIAAGVAPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|82544659|ref|YP_408606.1| hypothetical protein SBO_2208 [Shigella boydii Sb227]
gi|187732229|ref|YP_001880883.1| hypothetical protein SbBS512_E2405 [Shigella boydii CDC 3083-94]
gi|81246070|gb|ABB66778.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187429221|gb|ACD08495.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320173261|gb|EFW48470.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella dysenteriae CDC
74-1112]
gi|320187456|gb|EFW62146.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella flexneri CDC 796-83]
gi|332093351|gb|EGI98409.1| hypothetical protein SB359474_2557 [Shigella boydii 3594-74]
Length = 259
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|229515567|ref|ZP_04405026.1| SanA protein [Vibrio cholerae TMA 21]
gi|229347336|gb|EEO12296.1| SanA protein [Vibrio cholerae TMA 21]
Length = 254
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L + +SG H S ++ +++ +R + I + Y T
Sbjct: 92 NRINAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLD 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 152 SIVRAKEIFDTDNF---LIITQRFHCERALF 179
>gi|293414200|ref|ZP_06656849.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
gi|291434258|gb|EFF07231.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
Length = 259
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L + G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRDNPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|300716091|ref|YP_003740894.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299061927|emb|CAX59043.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 262
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 12/117 (10%)
Query: 49 RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ L G K+ +G + S ++ + + + K +T
Sbjct: 108 RLVEGIRLWRENPGAKLIFTGAAAQNNPVSSAEVTSRVAQSLGVPLSAIVTLD-KPRDTR 166
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A E + K F L+VT H+PR + Q+ P P ++ L +S
Sbjct: 167 QEAAEVAKVVGKTPF---LLVTSASHLPRAMIFFQQQGLD----PLPAPANQLAIDS 216
>gi|300769543|ref|ZP_07079429.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492958|gb|EFK28140.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 361
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 38/208 (18%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGE-----------PI 48
++ +F L+ F +GF F Y+ + I I+VL
Sbjct: 141 YFLTVFPNLVIFYLGF-WFYNYLTMLTIYQFNWPRLRQDYIIVLGAGLLDGDRVSPLLGQ 199
Query: 49 RIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RI R + Q + + SG +V + + + I L ++
Sbjct: 200 RIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQS 259
Query: 101 LNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQ---------FIP 149
T N Q + + + VT++YH R + ++ F+P
Sbjct: 260 KTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKADGIGARTARFFLP 319
Query: 150 YPIISHDLE---ENSSIFKIKILRVLLI 174
II + N + +L +L++
Sbjct: 320 DAIIREYIAIFVRNKWWHAVAMLGILIV 347
>gi|270261051|ref|ZP_06189324.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
gi|270044535|gb|EFA17626.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
Length = 247
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVKYLLLSGDNAQQSYNEPMTMRRDLIAAGVAPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|194468048|ref|ZP_03074034.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
gi|194452901|gb|EDX41799.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
Length = 271
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHS-VSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++A + KI +SG V + S+ ++ I + I KALNT
Sbjct: 126 ATRLDKAINCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPARKIIRENKALNT 185
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N AS + V++VT D+H+ R +++ FI
Sbjct: 186 WQNLAFASQLIKPQE--TVVVVTSDFHVLRARAYARKMGLNWSFI 228
>gi|262394509|ref|YP_003286363.1| SanA protein [Vibrio sp. Ex25]
gi|262338103|gb|ACY51898.1| SanA protein [Vibrio sp. Ex25]
Length = 224
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 61 HRINAAIELYNQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 121 SIVRAKKIFASERF---LIVTQRFHCERALF 148
>gi|218548436|ref|YP_002382227.1| hypothetical protein EFER_1064 [Escherichia fergusonii ATCC 35469]
gi|218355977|emb|CAQ88593.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325496858|gb|EGC94717.1| hypothetical protein ECD227_0955 [Escherichia fergusonii ECD227]
Length = 259
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|315266865|gb|ADT93718.1| protein of unknown function DUF218 [Shewanella baltica OS678]
Length = 233
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG S ++ K + + + I A +T
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIE 152
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 153 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAKG----LHPEAAPTDFIGRDDFWWR 205
Query: 165 ----KIKILRVLLIEYLKILLLSIQL 186
+ + + EY+ L L ++
Sbjct: 206 LTADNLVASQRAIHEYIGRLWLWLKT 231
>gi|84683831|ref|ZP_01011734.1| hypothetical protein 1099457000264_RB2654_20698 [Maritimibacter
alkaliphilus HTCC2654]
gi|84668574|gb|EAQ15041.1| hypothetical protein RB2654_20698 [Rhodobacterales bacterium
HTCC2654]
Length = 154
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 39 AIVVLTGE------PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLA 90
V G R ERA LL + ++I ++G + + I ++
Sbjct: 2 GAAVWPGGVASPALRRRTERAGRLLLDGQVQQIIVTGGVGDIPPAEADVAAGILADMEVP 61
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ ++ T N EA + V++V+ +H+PR+ L +R+
Sbjct: 62 ADLVLRDTRSTTTFENLVEARRMLQAGE--TVVVVSDAFHLPRSVLTARRLG 111
>gi|293409297|ref|ZP_06652873.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
gi|291469765|gb|EFF12249.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
Length = 259
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|16764350|ref|NP_459965.1| hypothetical protein STM0990 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161614771|ref|YP_001588736.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994940|ref|ZP_02576030.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168263514|ref|ZP_02685487.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466584|ref|ZP_02700446.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|16419502|gb|AAL19924.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161364135|gb|ABX67903.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195630934|gb|EDX49520.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205327272|gb|EDZ14036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205347829|gb|EDZ34460.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261246206|emb|CBG24010.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992729|gb|ACY87614.1| hypothetical protein STM14_1120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157533|emb|CBW17023.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911976|dbj|BAJ35950.1| hypothetical protein STMDT12_C10070 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223313|gb|EFX48382.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129255|gb|ADX16685.1| hypothetical protein STM474_0976 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987881|gb|AEF06864.1| hypothetical protein STMUK_0956 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|332342362|gb|AEE55696.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 247
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|320140100|gb|EFW31959.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143369|gb|EFW35150.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 208
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 14 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 64
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG +S+ + +Q+ I + + I + ++NT N +
Sbjct: 65 QQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 124
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 125 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 183
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 184 YRLLLTLYC 192
>gi|91226499|ref|ZP_01261248.1| SanA protein [Vibrio alginolyticus 12G01]
gi|91189131|gb|EAS75412.1| SanA protein [Vibrio alginolyticus 12G01]
Length = 224
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 61 HRINAAIELYNQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 121 SIVRAKKIFASERF---LIVTQRFHCERALF 148
>gi|168217115|ref|ZP_02642740.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182624176|ref|ZP_02951962.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177910590|gb|EDT72958.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380858|gb|EDT78337.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 257
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT-FLELQRINSTVQFI 148
+ E + +L+VT D+H R+ L + + +
Sbjct: 183 SKKIIENLSGKPIKDLDILVVTTDFHAMRSNLLAKRNGYNNIDLY 227
>gi|167553009|ref|ZP_02346759.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322470|gb|EDZ10309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|160914657|ref|ZP_02076871.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
gi|158433197|gb|EDP11486.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
Length = 255
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 47 PIRIERAFELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R++ A Q + FI G++ S+S+ ++ + + + I + +
Sbjct: 124 QHRLDEAIA-YHKQYQDTTFIVSGGQGINESISEAEAMRSYLVAHGIPQHQIIEEELSTS 182
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T N + + + V ++T+ +HM R +
Sbjct: 183 TFENFAFSKEYIKDKT-QKVGVITNSFHMLRALI 215
>gi|62179518|ref|YP_215935.1| hypothetical protein SC0948 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|198245262|ref|YP_002214914.1| hypothetical protein SeD_A1055 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389922|ref|ZP_03216533.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352197|ref|YP_002225998.1| hypothetical protein SG0932 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856381|ref|YP_002243032.1| hypothetical protein SEN0894 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582800|ref|YP_002636598.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62127151|gb|AAX64854.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197939778|gb|ACH77111.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602367|gb|EDZ00913.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205271978|emb|CAR36822.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708184|emb|CAR32477.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467327|gb|ACN45157.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713985|gb|EFZ05556.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326622667|gb|EGE29012.1| hypothetical protein SD3246_1028 [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627241|gb|EGE33584.1| hypothetical protein SG9_0953 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGIAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|16759859|ref|NP_455476.1| hypothetical protein STY0992 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142368|ref|NP_805710.1| hypothetical protein t1944 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052381|ref|ZP_03345259.1| hypothetical protein Salmoneentericaenterica_05289 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424605|ref|ZP_03357388.1| hypothetical protein SentesTyphi_02341 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581562|ref|ZP_03363388.1| hypothetical protein SentesTyph_10282 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613211|ref|ZP_03371037.1| hypothetical protein SentesTyp_12289 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650532|ref|ZP_03380585.1| hypothetical protein SentesTy_26823 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857895|ref|ZP_03384866.1| hypothetical protein SentesT_22570 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25347649|pir||AD0615 probable membrane protein STY0992 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502152|emb|CAD05390.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137998|gb|AAO69559.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|157369809|ref|YP_001477798.1| hypothetical protein Spro_1566 [Serratia proteamaculans 568]
gi|157321573|gb|ABV40670.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 247
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVKYLLLSGDNAQQSYNEPMTMRRDLIAAGVAPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|168233410|ref|ZP_02658468.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237094|ref|ZP_02662152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243758|ref|ZP_02668690.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447573|ref|YP_002044982.1| hypothetical protein SeHA_C1088 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472169|ref|ZP_03078153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737227|ref|YP_002114042.1| hypothetical protein SeSA_A1104 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194405877|gb|ACF66096.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458533|gb|EDX47372.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712729|gb|ACF91950.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289831|gb|EDY29192.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205332431|gb|EDZ19195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337158|gb|EDZ23922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|330013999|ref|ZP_08307835.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
gi|328533292|gb|EGF60043.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
Length = 259
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 41/151 (27%), Gaps = 28/151 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
+VVL G R+ L + G K+ +G + + +
Sbjct: 82 VVVLGGGYTWNPEWAPSSNLINNSLPRLTEGIRLWQANPGSKMIFTGAAAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I +G +TE A F L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSDIIVLGRP-KDTEEEALAVKRAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIP---YPIISHDLEENSSIFKI 166
+ P + S +I
Sbjct: 198 RHAGLDPLPAPANQLAVTSPLNPWERAIPSP 228
>gi|47565636|ref|ZP_00236676.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
gi|47557272|gb|EAL15600.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
Length = 185
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLVSHPTAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 143
>gi|260777426|ref|ZP_05886320.1| hypothetical protein VIC_002820 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607092|gb|EEX33366.1| hypothetical protein VIC_002820 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 283
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 15/117 (12%)
Query: 42 VLTG-EPIRIERAFELLENQ---IGEKIFISGVHHSVSKDILL------QKIPIRQDLAE 91
LT R+E +LL + +F GV + + +++P + +
Sbjct: 18 ALTAEGKSRVEALPKLLSSYDLNETALLFCGGVTPGQTTSEAMAMRDYFKQLPSAKMFHD 77
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFH----HVLIVTHDYHMPRTFLELQRINST 144
I + + NT N A+ ++ V +V++DYH+ R E+Q +
Sbjct: 78 LNIILESDSQNTVQNIHNAALKLKQLGIEDQRVDVTLVSNDYHLKR-IFEIQSLMDE 133
>gi|328948744|ref|YP_004366081.1| hypothetical protein Tresu_1898 [Treponema succinifaciens DSM 2489]
gi|328449068|gb|AEB14784.1| protein of unknown function DUF218 [Treponema succinifaciens DSM
2489]
Length = 273
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 30/154 (19%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSA------IVVLTGE-----------PIRIE 51
+ + F G FI + I + ++VL G R+
Sbjct: 71 IILIFLFFAG--VFISGLNLFFICNPRLSDGKENVRYVIVLGGGITKDAKLTDSVKNRVR 128
Query: 52 RAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A E + + ++G S +L+ + + E I KA +T N
Sbjct: 129 VASEYFKAHSAALVVVTGGKGKFSPCPESDVLKPVLASYGIDENRILAENKAKDTIQNFM 188
Query: 109 EASAWAEKNNFHH--------VLIVTHDYHMPRT 134
++ + + V +VT D+H+ R
Sbjct: 189 FSAKLFAEYDGISMEEVLASPVAVVTSDFHIARA 222
>gi|327402127|ref|YP_004342965.1| hypothetical protein Fluta_0117 [Fluviicola taffensis DSM 16823]
gi|327317635|gb|AEA42127.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 231
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 14/163 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV--SAIVV----LTGE------PI 48
MR + L+ + F + + AI+V G+ +
Sbjct: 1 MRIVKFSFLSLLVMVLSACGIFSPSPLKTNQKSLKKAPYDAIIVPGVPFDGKHWSETMKM 60
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ L + + I SG V+ + ++ + + I +A +T N
Sbjct: 61 RVQWGAYLYRKGVTKNIIYSGSSVYTEYEEAAVMALYGEALGIPKEHIFTDPRAEHTTEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ A+KN F + + T + + +++ + V +P
Sbjct: 121 IYYSYRVAKKNGFQKIALATDPFQLNGMRKFIKKFDLPVDLLP 163
>gi|186681947|ref|YP_001865143.1| hypothetical protein Npun_F1508 [Nostoc punctiforme PCC 73102]
gi|186464399|gb|ACC80200.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 232
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 4 FWYGL--FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
W L +++F++G I + + A +VL G IR E L Q
Sbjct: 20 LWQLLQKLTGVLYFVLGT-WLIFTTITLVFASSQPIDAFLVL-GGSIRRETYVAQLAKQY 77
Query: 62 -GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I IS S D + I + + + + A +T N + H
Sbjct: 78 PQTPILIS----HGSPDPCIWLIFQPELVELQNVWLEKCANSTFENFYYGIPILRRWGVH 133
Query: 121 HVLIVTHDYHMPRT 134
V+++T H+PR
Sbjct: 134 KVMLITSPSHLPRA 147
>gi|322832144|ref|YP_004212171.1| hypothetical protein Rahaq_1421 [Rahnella sp. Y9602]
gi|321167345|gb|ADW73044.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 307
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RIQGAINAYNSGKVKYLLLSGDNAQQSYNEPSTMRRDLIAAGIPASDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|126731355|ref|ZP_01747162.1| hypothetical protein SSE37_06799 [Sagittula stellata E-37]
gi|126708266|gb|EBA07325.1| hypothetical protein SSE37_06799 [Sagittula stellata E-37]
Length = 177
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 22/150 (14%)
Query: 38 SAIVVLTGEPI----------RIERAFELLENQIGEKIFIS--GVHHSVSKDILLQKIPI 85
+VL G R+ EL N ++ ++ H L+ + I
Sbjct: 6 DVAIVLGGGSAPDRLTPDTTMRVAAGVELYRNGRVNRLHMTCGNTHPGTRPGRLMAEAAI 65
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
R + + ++L+T NA + + +VT +H R L
Sbjct: 66 RAGVPPTAVTWEGQSLSTLQNALFSRPDLPRGETR--FVVTEPFHGLRGAASLAWAGR-- 121
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIE 175
P + + +S + +VLL E
Sbjct: 122 ---PAAVCTT---SETSGTPTRKAKVLLRE 145
>gi|333006363|gb|EGK25871.1| hypothetical protein SFVA6_1402 [Shigella flexneri VA-6]
Length = 259
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 46/157 (29%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG-VHHSV 74
+ V IVVL G R+ L G K+ +G V +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 75 SKDILLQKIPIRQDLA---ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + Q L E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGTRVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|261407512|ref|YP_003243753.1| hypothetical protein GYMC10_3711 [Paenibacillus sp. Y412MC10]
gi|261283975|gb|ACX65946.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 210
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIV----VLTGEP-----IRIERAFELLENQIGEKIFISGV 70
+ + + + PS +AIV V G+P RI+ A L + Q +K+ +G
Sbjct: 36 VGYTIWKYAGRTVNIPSDAAIVLGAAVWKGKPSPVFQGRIDHALWLYDQQYVDKLIFTGG 95
Query: 71 ---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
V++ ++ I + E I + + TE N A+ + LIV+
Sbjct: 96 RGSEEEVAESEAAKQYAIEHGVPERDILVETSSTITEQNLYYANKIGDAAGLSSYLIVSD 155
Query: 128 DYHMPRTFL 136
HM R
Sbjct: 156 PLHMKRAMA 164
>gi|152993138|ref|YP_001358859.1| hypothetical protein SUN_1551 [Sulfurovum sp. NBC37-1]
gi|151424999|dbj|BAF72502.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 248
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 20/151 (13%)
Query: 46 EPIRIERAFELLENQIGEKIFISGVHHSVSKDI------LLQKIPIRQDLAECCIDIGYK 99
R+ L + G K+ SG L Q + +R++ I +
Sbjct: 104 GLARVTEGVLLYKQHKGMKLVFSGYGKDEPLSNAKCSAALAQALGVREE----DIIVFET 159
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-----S 154
+T A S A+ + V++VT HM R ++ ++ I P
Sbjct: 160 PKDTLEEAGAMSEMAQGKH---VVLVTSASHMLRASRLFKKA--GIKVIEAPTDFKVKKP 214
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
DL + ++ EYL +L ++
Sbjct: 215 DDLLQLPGAEGLRRSETAFHEYLGLLWFWLK 245
>gi|194431483|ref|ZP_03063775.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194420308|gb|EDX36385.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|320182013|gb|EFW56918.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella boydii ATCC 9905]
gi|332091384|gb|EGI96471.1| hypothetical protein SD15574_2367 [Shigella dysenteriae 155-74]
gi|332092552|gb|EGI97625.1| hypothetical protein SB521682_1309 [Shigella boydii 5216-82]
Length = 259
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPHEQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|161503883|ref|YP_001570995.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865230|gb|ABX21853.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 258
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 44/144 (30%), Gaps = 25/144 (17%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE EA+A + L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEE---EAAAVKQAIGDTPFLLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSS 162
Q P ++ D N
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPW 221
>gi|75911018|ref|YP_325314.1| hypothetical protein Ava_4822 [Anabaena variabilis ATCC 29413]
gi|75704743|gb|ABA24419.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 215
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 27/171 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD------HPSVSAIVVLTGEP-------- 47
++ ++ L + + F + I + A +VL G
Sbjct: 22 KWLFWILITIISALL-----FAISSTAISIYSYGNSSYNNKADAAIVL-GAAVWGEEPSP 75
Query: 48 ---IRIERAFELLENQI-GEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKAL 101
RI A L +N + IF GV + + + + I ++
Sbjct: 76 VFRERINHAINLYKNGAISKIIFTGGVGEINEPAEAIVGKHYATARGVKTADIITETQSR 135
Query: 102 NTEGNAQEASAWAEKN-NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
T N + A + N F LI++ H+ R L + + P P
Sbjct: 136 TTYQNLKNAIEVVDTNEKFTKFLIISDPLHLKRAVLMARNLGIDAYPSPTP 186
>gi|160916149|ref|ZP_02078356.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
gi|158431873|gb|EDP10162.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
Length = 441
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDILLQK--IPIRQDLAECCIDIGYKALNTEG 105
R+E A + + ++G + + +AE I + +A +T G
Sbjct: 123 GRLETALASAQKYPNSYVLVTGGVEKNGWTEGQRMHDWLVEHGVAEERILVETEAADTAG 182
Query: 106 NAQEASAWAEKN-NFHHVLIVTHDYHMPR 133
NAQ + N + ++T YH+ R
Sbjct: 183 NAQNSFKILYNMPNIKTISMITSQYHLKR 211
>gi|52143179|ref|YP_083650.1| hypothetical protein BCZK2058 [Bacillus cereus E33L]
gi|51976648|gb|AAU18198.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 185
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLLSHPTAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 143
>gi|94313597|ref|YP_586806.1| hypothetical protein Rmet_4675 [Cupriavidus metallidurans CH34]
gi|93357449|gb|ABF11537.1| conserved hypothetical protein; putative membrane protein
[Cupriavidus metallidurans CH34]
Length = 270
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 33/206 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS------AIVVLTGEP-------- 47
++ W + LI +++ F ++++ P+ S AIV+L
Sbjct: 71 QWLWRAGWAGLIVWLVSVAMFFQHMRHGIADLAPNASAAGAPVAIVILGSGSPNCEVSPT 130
Query: 48 --IRIERAFELLENQIGEKIFISGVHH----SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ + + +SG ++ ++ + L + ++
Sbjct: 131 LAARLDEGLQQASRFPAASVVVSGGQDFGRLPCTEAGIMGDYLLAHGLVPERLIREDRST 190
Query: 102 NTEGNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+T N Q + ++ VL+VT D+H+ R +RI F +S
Sbjct: 191 STAENMQFSREVLARHGVRATDPVLVVTSDFHLLRA----ERIARKAGFT---TLSGAAA 243
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSI 184
+ L EY + +
Sbjct: 244 ATPLYIRYNAW---LREYFAYISGWV 266
>gi|269968233|ref|ZP_06182262.1| SanA protein [Vibrio alginolyticus 40B]
gi|269827156|gb|EEZ81461.1| SanA protein [Vibrio alginolyticus 40B]
Length = 244
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 81 HRINAAIELYNQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 140
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 141 SIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|163940067|ref|YP_001644951.1| hypothetical protein BcerKBAB4_2098 [Bacillus weihenstephanensis
KBAB4]
gi|163862264|gb|ABY43323.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 185
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDIALEYLHAHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDRSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YDVKHAVVVSNTYHLYRT 143
>gi|320106656|ref|YP_004182246.1| hypothetical protein AciPR4_1429 [Terriglobus saanensis SP1PR4]
gi|319925177|gb|ADV82252.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 223
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 19/147 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPI-----------RI 50
+ ++ + L G++ F + ++ D AI V G R+
Sbjct: 18 WMFFLFVLLLCIAWCGWVYF--QINRVARGDEARGADAIAVF-GAAQYLGHPSPVYHARL 74
Query: 51 ERAFELLENQIGEKIFISGVH----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L I + G ++ + + + + I ++++TE
Sbjct: 75 DHAVTLYRRSIAPIVITLGGSGDKRSGATEGGVGRDYLLANGIPFDHIIAETRSIDTEQQ 134
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR 133
A+ + A H +++V+ H+ R
Sbjct: 135 AESLATIAHVRGLHRIVVVSDSTHLFR 161
>gi|228985374|ref|ZP_04145533.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774327|gb|EEM22734.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 201
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 72 QNRLDVALEYLYSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 131
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 132 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 159
>gi|152969504|ref|YP_001334613.1| hypothetical protein KPN_00947 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893976|ref|YP_002918710.1| hypothetical protein KP1_1920 [Klebsiella pneumoniae NTUH-K2044]
gi|262040981|ref|ZP_06014203.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150954353|gb|ABR76383.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238546292|dbj|BAH62643.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041675|gb|EEW42724.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 259
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 40/151 (26%), Gaps = 28/151 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
+VVL G R+ L + G K+ +G + + +
Sbjct: 82 VVVLGGGYTWNPEWAPSSNLINNSLPRLTEGIRLWQANPGSKMIFTGAAAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +TE A F L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSDIIVLDRP-KDTEEEALAVKRAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIP---YPIISHDLEENSSIFKI 166
+ P + S +I
Sbjct: 198 RHAGLDPLPAPANQLAVTSPLNPWERAIPSP 228
>gi|24373225|ref|NP_717268.1| hypothetical protein SO_1657 [Shewanella oneidensis MR-1]
gi|24347454|gb|AAN54712.1|AE015612_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 244
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L+ + +SG ++K ++ K + I A +T
Sbjct: 105 RLTEGLRQLKLGQDCTLVVSGWGGELTKHPHAEVMAKAAAELGVDASRIIQFPLARDTLE 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ + + V +VT HMPR I + + ++
Sbjct: 165 EAQY---FKDHFGNQSVRLVTSASHMPRAMAIFS----GKGLIASAAPTDFRARDDFYWR 217
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+L L EY+ L L I+
Sbjct: 218 FTADNLLASQRALHEYIGRLWLWIK 242
>gi|229011547|ref|ZP_04168733.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
gi|229059943|ref|ZP_04197317.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|229133107|ref|ZP_04261943.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228650316|gb|EEL06315.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228719356|gb|EEL70960.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|228749702|gb|EEL99541.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
Length = 166
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L K+ +SG + + ++ + + E I I ++ NT
Sbjct: 37 QNRLDIALEYLHAHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDRSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 97 YENLKFSMDL---YDVKHAVVVSNTYHLYRT 124
>gi|84494933|ref|ZP_00994052.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
gi|84384426|gb|EAQ00306.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
Length = 226
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 42/121 (34%), Gaps = 5/121 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A EL + + + +SG + + + D ++ + + I + + +T +
Sbjct: 73 RLDAAKELYDGGKVKVLLVSGDNRTHAYDEPTAMRDYLVAAGVPTEAIVLDFAGRDTYDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
Q A V +++ YH+ R + T + + I
Sbjct: 133 CQRAHRIF---GVDKVTVISQGYHVGRAVALCRAAGMTTDGVGDTSMRERYPREWWIGWT 189
Query: 167 K 167
+
Sbjct: 190 R 190
>gi|254229583|ref|ZP_04922995.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|151937866|gb|EDN56712.1| conserved hypothetical protein [Vibrio sp. Ex25]
Length = 244
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL ++ +SG H S ++ +++ ++ + E I + Y T
Sbjct: 81 HRINAAIELYNQGKVKQFLLSGDNAHRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLD 140
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A F LIVT +H R
Sbjct: 141 SIVRAKKIFASERF---LIVTQRFHCERALF 168
>gi|308274760|emb|CBX31359.1| hypothetical protein N47_E48710 [uncultured Desulfobacterium sp.]
Length = 254
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 28/174 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG--VHHSVSKDILL 80
IVVL G R+ + KI SG V ++S+ +
Sbjct: 84 IVVLGGGCKGDLMLDPISRLTSDSLFRVVEGISIHNKIPESKIIFSGGSVFSTISESEAM 143
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + + + I + +TE A ++VT +HMPR+ +
Sbjct: 144 ADVALALGVNKDKIVEESEGPDTEAQALLIKKIV---GNDKFILVTSAFHMPRSMAVFNK 200
Query: 141 I--NSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ Y + L +IK + + + EYL + I+ +
Sbjct: 201 AGMHPIAAPAGYLVKKRKNINLLLFFPKSAEIKKMELAVHEYLGLFWAKIRGRI 254
>gi|119486244|ref|ZP_01620303.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
gi|119456457|gb|EAW37587.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
Length = 238
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK--IPIRQDLAECCIDIGYKALNTE 104
RI+ A +L KI ++G + + + ++ Q + I + Y +T
Sbjct: 76 ADRIQGAIDLYHLGRVRKILMTGDNATPEYNEVIAMQYYAYEQGIPLEDIKLDYAGFSTY 135
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++T YH+ R
Sbjct: 136 ESCYRAREIF---GIQQAVLITQQYHLSRAVY 164
>gi|118474006|ref|YP_889974.1| hypothetical protein MSMEG_5741 [Mycobacterium smegmatis str. MC2
155]
gi|118175293|gb|ABK76189.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 211
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R + + + ++G + V++ ++ + + I + +A +T
Sbjct: 81 YHRTLTGLVIAQAFPQSPVIVTGGNPQRGVTEAAAMRNLLLMLGFPANRIIVEDRANSTV 140
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
NAQ + A+K +++VT H R +
Sbjct: 141 QNAQFSVPLAKKAGTTGIILVTSSSHQGRADQNFADAGGNI 181
>gi|238785813|ref|ZP_04629783.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
gi|238713266|gb|EEQ05308.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
Length = 263
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 45/165 (27%), Gaps = 32/165 (19%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---HHS 73
+ V IVVL G R+ L K+ +G ++
Sbjct: 76 NDPVDYIVVLGGGYTFNPNWPPSANLFANSLPRVTEGVRLYRAHPNAKMVFTGASTPNNQ 135
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
S Q A + + + +T A + F L+VT H+PR
Sbjct: 136 SSAKTAAQVAESLGVPAADIVTLE-QPKDTVEEAAAVATLVGDKPF---LLVTSASHLPR 191
Query: 134 TFLELQRINSTVQFIPYPIISHDL----EENSSIFKIKILRVLLI 174
+ P P ++ L +S I L
Sbjct: 192 AIKFFTA----IGLHPIPAPANQLAITTPLHSWERTIPAAAYLGH 232
>gi|307154403|ref|YP_003889787.1| hypothetical protein Cyan7822_4604 [Cyanothece sp. PCC 7822]
gi|306984631|gb|ADN16512.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 229
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
+ F+ + I ++ + F V ++ + V I+VL G R A L
Sbjct: 18 QRFFKLALIAGIALMVISLLFNVAV-RLPLNSSAPVDGILVLGGSIQREIYAARLTHLHS 76
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ IS + SKD + + R + + A +T GN + H
Sbjct: 77 NIPVIIS----TGSKDPCIWLLFKRNMAQSNKVILEKCANSTFGNFFYSVPILRHWGVHK 132
Query: 122 VLIVTHDYHMPRT 134
V ++T H+PR
Sbjct: 133 VKVITSPSHLPRA 145
>gi|229029391|ref|ZP_04185475.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
gi|228731922|gb|EEL82820.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
Length = 194
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ GF+ + Y K + I+VL RI+ A E L++
Sbjct: 18 VCAVYAGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTTPSYSLQYRIDEAAEYLQS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++Q +AE I + K+ +T+ N + +
Sbjct: 75 HEKTIAIVSGGKGKGEDISEALAMKNGLMKQKIAEDRIIMEDKSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|74311477|ref|YP_309896.1| hypothetical protein SSON_0922 [Shigella sonnei Ss046]
gi|73854954|gb|AAZ87661.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323165391|gb|EFZ51178.1| hypothetical protein SS53G_4075 [Shigella sonnei 53G]
Length = 259
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 29/150 (19%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENS 161
PR + Q+ + P P ++ L +S
Sbjct: 191 PRAMIFFQQ----EELNPLPAPANQLAIDS 216
>gi|302560768|ref|ZP_07313110.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302478386|gb|EFL41479.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 233
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 22/185 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R + VC++ + ++ + D P VV R+
Sbjct: 20 RLVQGVVTVCVLALLPATWLRLATDDRLRTTADVPRAEVAVVFGAGLWDGEPSPYLAHRL 79
Query: 51 ERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A EL E + ++G + + ++ R + I Y +T +
Sbjct: 80 DAAAELYRAGRIEVVLVTGDNSREEYDEPDAMRAYLTRHGVPGSRIVSDYAGFDTWDSCV 139
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
A ++++ +H+ R + Y + D + +
Sbjct: 140 RAKKIF---GVDRAVLISQGFHIRRAVALCETAG----VSSYGVGVDDRHDVTWY--YGT 190
Query: 169 LRVLL 173
+R L
Sbjct: 191 VRELF 195
>gi|168209634|ref|ZP_02635259.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712243|gb|EDT24425.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 257
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 27/150 (18%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT 134
+ E + +LIVT D+H R+
Sbjct: 183 SKKIIENLSRKPIKDLDILIVTTDFHAMRS 212
>gi|320010228|gb|ADW05078.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 217
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKD-------ILLQKIPIRQDLAECCIDIGYKALNT 103
+ L + + I +G ++D ++ + + I + +A NT
Sbjct: 41 DATVNLYQRGMFPLILFTGATSRTTRDRMPRGEAEHYRERALELGVPASAILVEPRARNT 100
Query: 104 EGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N A + VL+V+ Y R + +R+ V +
Sbjct: 101 GENINFARELLAERSVEVSSVLLVSKPYEERRAYATARRLWPGVAIV 147
>gi|229172971|ref|ZP_04300523.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
gi|228610491|gb|EEK67761.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
Length = 201
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 72 QNRLDVALEYLVSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 131
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 132 YENLKFSMDL---YDVKHAVVVSNTYHLYRT 159
>gi|254446112|ref|ZP_05059588.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
gi|198260420|gb|EDY84728.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
Length = 172
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 19/127 (14%)
Query: 40 IVVL---TGEPIRI--------ERAFELLENQIGEKIFISGV-----HHSVSK-DILLQK 82
IVVL G+ R+ A L + + +I ++G + + + L++
Sbjct: 9 IVVLGSPNGDDGRLFGVAEERCVAAVGLWKAEPDCRILLTGGFGEHFNRTETAHAEYLKR 68
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-- 140
+ + +LNT +A +A ++ ++VT DYH+ R +R
Sbjct: 69 RLVELGIPGNRFLEFALSLNTLEDASKAKPIIAESGAKRCVVVTSDYHLDRASYVFRREF 128
Query: 141 INSTVQF 147
S V+
Sbjct: 129 AGSGVEL 135
>gi|149909508|ref|ZP_01898162.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
gi|149807413|gb|EDM67364.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
Length = 257
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 48 IRIERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKA 100
RI A L IG KI +SG ++ + + + + I +
Sbjct: 98 SRIYAAARLYNECIGTEQQCKIIVSGGDTQKLGDTEAAVYKNRLVSIGINAADIITEPNS 157
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR------------INSTVQFI 148
LNT NAQ S K +F + ++++ H+ R+ L + +++TV FI
Sbjct: 158 LNTWQNAQFTSDILSKGDFDNSVLISSGLHIKRSQLYFEHFGVRATPIRADYMSATVSFI 217
Query: 149 P--YPIISHDLEENSSI 163
P Y D + I
Sbjct: 218 PLGYNFALTDFALHEWI 234
>gi|253734225|ref|ZP_04868390.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
gi|253727920|gb|EES96649.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
Length = 322
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG +S+ + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|89053049|ref|YP_508500.1| hypothetical protein Jann_0558 [Jannaschia sp. CCS1]
gi|88862598|gb|ABD53475.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 153
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 12/141 (8%)
Query: 49 RIERAFELLENQIGEKIF-ISGVHH-SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R L G+ + G+ ++ + + + E I + + NT N
Sbjct: 23 RTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALLRDAGVPEDRIRLERTSTNTVEN 82
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ A VLIV+ YH+PR L +R V P+ +
Sbjct: 83 IRHALPLLA--GERCVLIVSDAYHLPRARLIARREGLEVSVSAPPLTGARVW-------- 132
Query: 167 KILRVLLIEYLKILLLSIQLS 187
+ L E ++ + +++
Sbjct: 133 PQAKGWLREIPGLIAVLLRIR 153
>gi|15925348|ref|NP_372882.1| hypothetical protein SAV2358 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927938|ref|NP_375471.1| hypothetical protein SA2148 [Staphylococcus aureus subsp. aureus
N315]
gi|21284008|ref|NP_647096.1| hypothetical protein MW2279 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487141|ref|YP_044362.1| hypothetical protein SAS2249 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650902|ref|YP_187160.1| hypothetical protein SACOL2354 [Staphylococcus aureus subsp. aureus
COL]
gi|87162083|ref|YP_494939.1| hypothetical protein SAUSA300_2304 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196279|ref|YP_501100.1| hypothetical protein SAOUHSC_02638 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268795|ref|YP_001247738.1| hypothetical protein SaurJH9_2382 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394865|ref|YP_001317540.1| hypothetical protein SaurJH1_2428 [Staphylococcus aureus subsp.
aureus JH1]
gi|151222471|ref|YP_001333293.1| hypothetical protein NWMN_2259 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980673|ref|YP_001442932.1| hypothetical protein SAHV_2342 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510552|ref|YP_001576211.1| hypothetical protein USA300HOU_2340 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141291|ref|ZP_03565784.1| hypothetical protein SauraJ_06573 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253314698|ref|ZP_04837911.1| hypothetical protein SauraC_00695 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007134|ref|ZP_05145735.2| hypothetical protein SauraM_11715 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794700|ref|ZP_05643679.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407380|ref|ZP_05680523.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258422292|ref|ZP_05685204.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439684|ref|ZP_05690430.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258446541|ref|ZP_05694696.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450342|ref|ZP_05698434.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258452631|ref|ZP_05700635.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262049818|ref|ZP_06022682.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262052093|ref|ZP_06024302.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|269203990|ref|YP_003283259.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|282925248|ref|ZP_06332907.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282926912|ref|ZP_06334539.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|284025381|ref|ZP_06379779.1| hypothetical protein Saura13_12367 [Staphylococcus aureus subsp.
aureus 132]
gi|294848900|ref|ZP_06789645.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|295405045|ref|ZP_06814858.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296275444|ref|ZP_06857951.1| hypothetical protein SauraMR_03830 [Staphylococcus aureus subsp.
aureus MR1]
gi|297209823|ref|ZP_06926219.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244102|ref|ZP_06927992.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300910835|ref|ZP_07128285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379551|ref|ZP_07362285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13702309|dbj|BAB43450.1| SA2148 [Staphylococcus aureus subsp. aureus N315]
gi|14248132|dbj|BAB58520.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21205451|dbj|BAB96144.1| MW2279 [Staphylococcus aureus subsp. aureus MW2]
gi|49245584|emb|CAG44062.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285088|gb|AAW37182.1| membrane protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87128057|gb|ABD22571.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203837|gb|ABD31647.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741864|gb|ABQ50162.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH9]
gi|149947317|gb|ABR53253.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH1]
gi|150375271|dbj|BAF68531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722808|dbj|BAF79225.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369361|gb|ABX30332.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257788672|gb|EEV27012.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840892|gb|EEV65343.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257841723|gb|EEV66160.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847460|gb|EEV71462.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257854609|gb|EEV77557.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856434|gb|EEV79343.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257859703|gb|EEV82547.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259159994|gb|EEW45029.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|259162125|gb|EEW46703.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262076280|gb|ACY12253.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941943|emb|CBI50354.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282591363|gb|EFB96436.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282592649|gb|EFB97658.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|285818021|gb|ADC38508.1| Integral membrane protein [Staphylococcus aureus 04-02981]
gi|294824279|gb|EFG40703.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|294969990|gb|EFG46008.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296885496|gb|EFH24433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178880|gb|EFH38125.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300887815|gb|EFK83010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302752229|gb|ADL66406.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341896|gb|EFM07801.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830705|emb|CBX35547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128719|gb|EFT84720.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198096|gb|EFU28427.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|329315045|gb|AEB89458.1| Membrane protein, putative [Staphylococcus aureus subsp. aureus
T0131]
gi|329723592|gb|EGG60121.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21172]
gi|329726055|gb|EGG62528.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21189]
gi|329730403|gb|EGG66793.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21193]
Length = 322
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG +S+ + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|228900868|ref|ZP_04065083.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
gi|228858794|gb|EEN03239.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
Length = 166
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG +S+ ++ + + E I I ++ NT
Sbjct: 37 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDISEAHSMRNYLMVHGIDESRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 97 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 124
>gi|108762577|ref|YP_635041.1| putative SanA protein [Myxococcus xanthus DK 1622]
gi|108466457|gb|ABF91642.1| putative SanA protein [Myxococcus xanthus DK 1622]
Length = 225
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 22/162 (13%)
Query: 47 PIRIERAFELLENQIGEKIFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A L + + + +SG HH +++ + + E I L
Sbjct: 80 AQRLDAAIALWQQGKVQTVLVSGDQTKPFHHETRA---MRRYLVEHGVPESAILGDEAGL 136
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+T + A+ ++VT +H+ R I ++V + + + +
Sbjct: 137 STYDSCLRAA---TVFGAKRAVLVTQRFHLTRALF----IANSVGIDAWGVAADEGRSTP 189
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEE 203
R + E L +L + L + A T++ E
Sbjct: 190 W-------RYQVRETLSRVLALAMVMLEVEPAYPSGRTVLPE 224
>gi|299137094|ref|ZP_07030277.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298601609|gb|EFI57764.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 222
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 15/151 (9%)
Query: 14 FFIMGFISFIRYVK-QMHIPDHPSVSAIVVL-----TGEPI-----RIERAFELLENQIG 62
+ F R +K I + + AI V G P R+++A L + I
Sbjct: 28 VAVAWFGWVYREIKFTADIDNAQTADAIAVFGAAEYAGRPSPVLHARLDKAVALYQRGIA 87
Query: 63 EKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ G ++ + + + + I ++ +TE + + AE+ +
Sbjct: 88 PVVVTLGGGGDKDSGNTEGGVGRDYLLANGVPYDKIIAETESFDTEQQVENLALIAEREH 147
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
F H+++V+ H+ R L +R V P
Sbjct: 148 FRHIVVVSDGTHLFRIALLCRRAGLQVYTSP 178
>gi|258442759|ref|ZP_05691319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282893804|ref|ZP_06302036.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
gi|257851880|gb|EEV75814.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282763862|gb|EFC03990.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
Length = 322
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG +S+ + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|19554196|ref|NP_602198.1| hypothetical protein NCgl2900 [Corynebacterium glutamicum ATCC
13032]
Length = 188
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFISGVHHSVSKD 77
FI + V ++VL G R E EL+E +S + S SKD
Sbjct: 27 LAWFIY----PAKAEPKKVDVVLVLAGSSDGRHEYGAELVEEGYASNYVVS--NPSGSKD 80
Query: 78 ILL----QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ ++ C+D Y + T G A+ + A+K + VL+VT H R
Sbjct: 81 KVGYAHCAGKSRPKNAESFCMD-PYPVI-TSGEARTFNELAKKEGWESVLVVTSRTHTQR 138
>gi|62391851|ref|YP_227253.1| hypothetical protein cg3330 [Corynebacterium glutamicum ATCC 13032]
gi|21325775|dbj|BAC00396.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41222998|emb|CAF18943.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032]
Length = 191
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFISGVHHSVSKD 77
FI + V ++VL G R E EL+E +S + S SKD
Sbjct: 30 LAWFIY----PAKAEPKKVDVVLVLAGSSDGRHEYGAELVEEGYASNYVVS--NPSGSKD 83
Query: 78 ILL----QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ ++ C+D Y + T G A+ + A+K + VL+VT H R
Sbjct: 84 KVGYAHCAGKSRPKNAESFCMD-PYPVI-TSGEARTFNELAKKEGWESVLVVTSRTHTQR 141
>gi|238795861|ref|ZP_04639374.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
gi|238720324|gb|EEQ12127.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
Length = 263
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W L + + + + + + V IVVL G
Sbjct: 45 LSWLVLLLISLQPVADRLLLPLEKQYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFAN 104
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL--AECCIDIGYKALNT 103
R+ L K+ +G + ++ + + L I + + +T
Sbjct: 105 SLPRVTEGVRLYRAHPDAKMVFTGGSTANNQSSAKTAAQVAESLGVPAADIVVLEQPKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----EE 159
A + F L+VT H+PR + P P ++ L
Sbjct: 165 HEEAAAVATLVGDKPF---LLVTSASHLPRAIKFFTA----IGLHPIPAPANQLAITTPL 217
Query: 160 NSSIFKIKIL 169
+S I
Sbjct: 218 HSWERTIPAA 227
>gi|327440297|dbj|BAK16662.1| uncharacterized conserved protein [Solibacillus silvestris StLB046]
Length = 190
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + L+ K ++G ++ ++ I+ +AE I + ++ T
Sbjct: 59 KNRLDAAVDYLKRYPTVKAIVTGGQGADEDRTEASVMADYLIKHGVAENRISLEDQSTTT 118
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
N A N + I+++D+H+ R + +++ + P
Sbjct: 119 YENLLFAKKLLPDNT-ASITIISNDFHLKRATILARKLGLKADVVAAP 165
>gi|322832243|ref|YP_004212270.1| hypothetical protein Rahaq_1521 [Rahnella sp. Y9602]
gi|321167444|gb|ADW73143.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 259
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 43/151 (28%), Gaps = 25/151 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
+VVL G R+ + G K+ +G + S +
Sbjct: 84 VVVLGGGYTYNPAWAPSSNLINNSLPRVAEGIRIYRANPGSKMIFTGARAMTNPMSSAAV 143
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +T A + + F ++VT H+PR +
Sbjct: 144 AGKVAESLGVPESDIILLDRP-RDTHQEALQVKEMLGEQPF---VLVTSANHLPRAIIFF 199
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+++ P ++ D N +
Sbjct: 200 RQLGLNPIPAPANQLAIDSPLNPWEKALPQA 230
>gi|312903405|ref|ZP_07762585.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310633281|gb|EFQ16564.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315169828|gb|EFU13845.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315577610|gb|EFU89801.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 344
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVTEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|257089980|ref|ZP_05584341.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|256998792|gb|EEU85312.1| conserved hypothetical protein [Enterococcus faecalis CH188]
Length = 337
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVTEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|209694809|ref|YP_002262737.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
gi|208008760|emb|CAQ78957.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
Length = 225
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + +SG H S ++ +++ ++ + E I + Y T +
Sbjct: 75 RIDAAIELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGVPEENITLDYAGFRTLDS 134
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + + IVT +H R
Sbjct: 135 VLRAKDIF---DVESLTIVTQQFHCQRALF 161
>gi|326405987|gb|ADZ63058.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 194
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L +N KI +SG VS+ ++ I + I KA +T
Sbjct: 62 QERLDAALLLAKNNPQAKIIVSGAKGADEPVSEAFSMKNYLITHHIRADRIISEDKAGDT 121
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + + +IVT D+H+ R
Sbjct: 122 AENIAYSKKYFDGKT----VIVTSDFHLYRALY 150
>gi|323139875|ref|ZP_08074903.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322394871|gb|EFX97444.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 199
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 9/135 (6%)
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I A L + +I ++G + + + + + + E I + A NT N
Sbjct: 49 ILPAVSLYMQGMTRRIVVTGHGPADGSEPEWRVYRDYALSAGVPEAAILVEPHARNTLEN 108
Query: 107 AQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINST--VQFIPYPIISHDLEEN 160
+ N + I + H R ++ +R V + P D++ +
Sbjct: 109 FVFSDRLIADEIGWSNIGSMAICSKPLHARRAYMTARRHFPKDVVLLMTPPKHPADIQAD 168
Query: 161 SSIFKIKILRVLLIE 175
++ E
Sbjct: 169 DWWRTPVGRERVMGE 183
>gi|119483396|ref|ZP_01618810.1| hypothetical protein L8106_05066 [Lyngbya sp. PCC 8106]
gi|119458163|gb|EAW39285.1| hypothetical protein L8106_05066 [Lyngbya sp. PCC 8106]
Length = 239
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDI 78
+ I V + V A VL G R EL +I IS G +
Sbjct: 33 VRLISQVITLPSAAQQPVDAFFVLGGSIKREIFVSELAAQSPNTRILISTGSDDPCILKL 92
Query: 79 LLQK-IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ P++Q E C A +T N + + N HH+ ++T H+PR
Sbjct: 93 FERNNTPLKQVWLEKC------ANSTFTNFVFSQPLLSQWNVHHIQLITSKSHLPRAL 144
>gi|15672393|ref|NP_266567.1| hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723285|gb|AAK04509.1|AE006277_9 hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
Length = 194
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L +N KI +SG VS+ ++ I + I KA +T
Sbjct: 62 QERLDAALLLAKNNPQAKIIVSGAKGADEPVSEAFSMKNYLITHHIRADRIISEDKAGDT 121
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + + +IVT D+H+ R
Sbjct: 122 AENIAYSKKYFDGKT----VIVTSDFHLYRALY 150
>gi|294491966|gb|ADE90722.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 259
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL G R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVSARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|269124570|ref|YP_003297940.1| hypothetical protein Tcur_0298 [Thermomonospora curvata DSM 43183]
gi|268309528|gb|ACY95902.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 230
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL I ++G + D ++ + + + Y +T
Sbjct: 77 AGRLDAAAELYRAGKVRAILVTGDNSREGYDEPTVMWNYLTAKGIPGHKVVRDYAGFDTW 136
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ A ++VT +H+PR + + +
Sbjct: 137 DSCVRAKRIF---GVERAIVVTQTFHLPRAVALCRAAGLEATGVGH 179
>gi|227496423|ref|ZP_03926709.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
gi|226834042|gb|EEH66425.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length = 363
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 34/136 (25%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEK---------------IFISG 69
P A+VV RI E+ +++ + + +SG
Sbjct: 166 PHPDAVVVHGAGLINGAVTPLLASRITTGVEIWQDEAARRQKSSSDGEAASGRPVLVMSG 225
Query: 70 V---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN------FH 120
S+ + + + + I + ++ T N +
Sbjct: 226 GQGDDEPTSEASAMAEYAVGLGVPREDIVLEDRSTTTRENIAFTRELLADLGARHNVSYD 285
Query: 121 HVLIVTHDYHMPRTFL 136
VL+VT YH RT +
Sbjct: 286 QVLLVTSSYHAVRTAI 301
>gi|271967291|ref|YP_003341487.1| hypothetical protein Sros_6010 [Streptosporangium roseum DSM 43021]
gi|270510466|gb|ACZ88744.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 226
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 5/98 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ + EL + I +SG + D +++ + + + + + Y +T
Sbjct: 73 ARRLDISAELYRAGKVKAILLSGDNSRAGYDEPTVMRDYLLARRVPAGALVLDYAGFDTW 132
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A + +VT +H+PR +
Sbjct: 133 DSCVRARD---VFGATRLTVVTQVFHLPRAVALCRAAG 167
>gi|225548067|ref|ZP_03769352.1| hypothetical protein RUMHYD_00046 [Blautia hydrogenotrophica DSM
10507]
gi|225040743|gb|EEG50989.1| hypothetical protein RUMHYD_00046 [Blautia hydrogenotrophica DSM
10507]
Length = 196
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 22/148 (14%)
Query: 37 VSAIVVL-TGEPIRIERAFELLENQIGEKIFISGVHHSV-------------------SK 76
I V G P ERA +L + + SG + + ++
Sbjct: 22 ADIIFVPGNGYPQMAERAAKLWKAGFAPYVLPSGKYSTAFGEFSGVLDKKEEYQGTFSTE 81
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRT 134
L+++ ++ + + I +A TE NA+ + E ++ +YH R
Sbjct: 82 WEFLREVLVKNGVPDYAILREDQATYTEQNARYSRRVTEHAGITVKRAMLCCKNYHARRA 141
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSS 162
+L Q+ F P ++ N+
Sbjct: 142 YLYYQQYFPNTVFHVLPSCVDGIDRNNW 169
>gi|156934588|ref|YP_001438504.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
gi|156532842|gb|ABU77668.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
Length = 259
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 58/202 (28%), Gaps = 29/202 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPI----------- 48
M W L + + + + + V+ + + IVVL G
Sbjct: 43 MTASWVILLLLSLQPVADGLL--KPVEDDYPTWNGQKADYIVVLGGGYTWNDKWAPSSNL 100
Query: 49 ------RIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ L G K+ +G + + + + I +
Sbjct: 101 VNNSLPRVTEGVRLWLANPGAKMVFTGARATTNPVSTAEAGARVAESLGVPRTDIITLDS 160
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+TE A + K F L+VT H+PR + +R P ++ D
Sbjct: 161 P-KDTEEEAAAVAGALGKQPF---LLVTSASHLPRAMIFFKRQGLNPIPAPANQMAIDSP 216
Query: 159 ENSSIF-KIKILRVLLIEYLKI 179
N L ++ E
Sbjct: 217 LNPWERVYPSSLWLMHSERAGY 238
>gi|228997721|ref|ZP_04157328.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
gi|229009077|ref|ZP_04166416.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228752247|gb|EEM01936.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228762065|gb|EEM11004.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
Length = 184
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 7/136 (5%)
Query: 50 IERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+E+A L + + I SG + ++ L+ I I + E I +A +T N
Sbjct: 35 MEKAASLYKQGLAPYILPSGGYKPQVGTTEWDFLRNIGIANGVPEEAILKEDQAQHTLEN 94
Query: 107 AQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQ--FIPYPIISHDLEENSS 162
A+ + + +IV H R L Q F+ I + + + +
Sbjct: 95 ARLSLEVLQNTGIDPKKAIIVCKAGHSRRALLCYQAEFPKETEFFVSSVIDRYGITKENW 154
Query: 163 IFKIKILRVLLIEYLK 178
+ ++ E K
Sbjct: 155 FTTEIGISRIMTEVEK 170
>gi|323492448|ref|ZP_08097596.1| SanA protein [Vibrio brasiliensis LMG 20546]
gi|323313235|gb|EGA66351.1| SanA protein [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A EL E +SG H S ++ +++ +R + E I + Y T
Sbjct: 83 NRIDAAIELYEQGKVSHFLLSGDNAHRSYNEPWTMKRDLLRAGIPEDRIFLDYAGFRTLD 142
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + +NF LI++ +H R + + + +
Sbjct: 143 SVVRAKEIFDTDNF---LIISQKFHCERAL--FIANSHDIDAKCFAVAGPS 188
>gi|149184051|ref|ZP_01862406.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
gi|148848239|gb|EDL62534.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
Length = 245
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 16/151 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-IRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R+ L + + F+M F + + + +M + I++L R+
Sbjct: 56 RHIHRALLIGYVLFLMSFTAVQVLLLMEMGSEAPDDIQQIIILGAGLKGEEISQTLETRL 115
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E E L + +SG + + + + + ++ I ++ T N
Sbjct: 116 EAGVEYLRKNPEIPVIVSGGQGEGEDIPESTAMSRYLVSHGISSNRITEEDRSTTTFENL 175
Query: 108 QEASAWAEKNNF--HHVLIVTHDYHMPRTFL 136
+ E+ +LI+T DYH+ R L
Sbjct: 176 LNSKRILERKGAEDDRILIITSDYHVFRAKL 206
>gi|119026002|ref|YP_909847.1| hypothetical protein BAD_0984 [Bifidobacterium adolescentis ATCC
15703]
gi|118765586|dbj|BAF39765.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 250
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 20/147 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRY----VKQMHIPDHPSVSAIVVL-----TGEPI-----RIE 51
G + ++ G ++F + M+ P + ++VL P R++
Sbjct: 67 RGAIIAVVAI--GIVAFCTIEGCIIGNMNAQGEPDLDYVIVLGAQVRESGPSKALRYRLD 124
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R + LE +SG + ++ + + +AE I K+ +T N
Sbjct: 125 RTIDYLEENPDTICIVSGGQGHNEPFAEAQGMADYLQKHGIAENRIIQESKSESTMENIV 184
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + N V IVT+D+HM R
Sbjct: 185 NSKKLMRQEN-ASVGIVTNDFHMFRAL 210
>gi|291531732|emb|CBK97317.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 201
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 24/166 (14%)
Query: 33 DHPSVSAIVVLTGEPI--RIERAFELLENQIGEKIFISG-----------------VHHS 73
+ V AI L G + E A EL + + I SG ++
Sbjct: 18 EPQKVDAIF-LPGGSHPEQPEYAAELYRQGLTDWIVPSGGVSVKEEKWHGVRSKAEIYSG 76
Query: 74 VSKD--ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDY 129
+ + ++ + + I K+ +T NA + ++ +IV +
Sbjct: 77 DYRSDCEFFTDVLVKNGVPQTAIIEESKSGHTRDNAFLSRKAVDEKGIMIKSGIIVCKAF 136
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
H R + Q V P+ +++ + + K +L E
Sbjct: 137 HARRCLMLYQMAFPNVDMTVCPVHCYNITKENWYTTEKGTDRVLGE 182
>gi|297566663|ref|YP_003685635.1| hypothetical protein Mesil_2261 [Meiothermus silvanus DSM 9946]
gi|296851112|gb|ADH64127.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 16/123 (13%)
Query: 47 PIRIERAFELLENQIGEKIFISGV-HHSVSKDIL------LQKIPIRQDLAECCIDIGYK 99
R+E A L I ++G L+ + C +
Sbjct: 53 KGRLETALRLYRQHRAPGIIVTGGKQPGDRYSEGEVGCRYLKAQGVPPTALRC----ETE 108
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ +T N K N V++VT + H+PR + + ++ YP+
Sbjct: 109 SHSTWQNLNNIKDTVGKQN---VIVVTDEPHLPRALYLAESL--GIKAQGYPVRGTFSSS 163
Query: 160 NSS 162
Sbjct: 164 YYW 166
>gi|168213058|ref|ZP_02638683.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170715436|gb|EDT27618.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 257
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 27/150 (18%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F S IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKSCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT 134
+ E + +LIVT D+H R+
Sbjct: 183 SKKIIENLSGKPIKDLDILIVTTDFHAMRS 212
>gi|288923137|ref|ZP_06417284.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288345508|gb|EFC79890.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 220
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEG 105
A L + +I +G + + D ++ + + + I I A NT
Sbjct: 48 AAALYHRGLFPRIVFTGANAPTTIDTFPRGEAVHYREHALTLHVPDAAILIETTARNTGE 107
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQF 147
N + V +++ Y R + +++ TV
Sbjct: 108 NITRTRDLLTTHGITPRSVTLISRPYQQRRAYATCRKLWPTVHV 151
>gi|239918159|ref|YP_002957717.1| hypothetical protein Mlut_16750 [Micrococcus luteus NCTC 2665]
gi|281415654|ref|ZP_06247396.1| hypothetical protein MlutN2_10664 [Micrococcus luteus NCTC 2665]
gi|239839366|gb|ACS31163.1| hypothetical protein Mlut_16750 [Micrococcus luteus NCTC 2665]
Length = 243
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + G V H D P V A++VL P + A EL + + +++F+S
Sbjct: 28 LAALGLAFGAGWATHAVTDPHPDDAPRVDALLVLYSRPRVYDAATELAASGVTDRLFVS- 86
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKA---LNTEGNAQEASAWAEKNNFHHVLIVT 126
+ L P +D + + A + T+G A+ + HH+ ++T
Sbjct: 87 TYLGPDGHEKLCGGPEERDPRLAGVTVECFAPDPVTTQGEVIHAADRMRELGLHHLGVLT 146
Query: 127 HDYHMPRTFL 136
H+ R L
Sbjct: 147 FHQHVERARL 156
>gi|254360530|ref|ZP_04976679.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
gi|153091070|gb|EDN73075.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
Length = 372
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 20/151 (13%)
Query: 19 FISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI-----RIERAFELLENQIGE 63
F +F + P I V G P R+++ E+ +
Sbjct: 185 FFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPNKDGTPSPLLLDRLQKTKEMAQKFPQA 244
Query: 64 KIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
KI +SG V ++ ++ K + + + + A +T GNA + N
Sbjct: 245 KIIVSGGAVKTEFAEADVMAKWLSENGIEKDRLLLDPVARDTPGNAVGIIKLMQTYNGKK 304
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
VL + H+PR L+ Q I YPI
Sbjct: 305 VLGIGTLQHIPRATAVLKG---YAQHIGYPI 332
>gi|46861|emb|CAA33876.1| putative polycistronic operon [Streptomyces coelicolor]
Length = 203
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 17/157 (10%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVS-------KDILLQKIPIRQDLAECCIDIGYKALNT 103
E EL + I +G + + ++ + + E I + A NT
Sbjct: 23 ETTAELYHRGMAPVIVFTGATSRTTHERMPRGEAEHYRERAVELGVPERAILVEPNARNT 82
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + A E VL+V+ Y R + +++ V+++ +S +
Sbjct: 83 GENIRLSRALLEDLGMPVTSVLLVSKPYEERRAYATARKLWPNVEWV---CVSTSMTLPD 139
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
+ I R+++ +L+ Q L F I
Sbjct: 140 YVKSIGDARLVID-----MLVGAQQRLMVYPRQGFMI 171
>gi|261492344|ref|ZP_05988906.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496130|ref|ZP_05992538.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308232|gb|EEY09527.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312027|gb|EEY13168.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 372
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 20/151 (13%)
Query: 19 FISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI-----RIERAFELLENQIGE 63
F +F + P I V G P R+++ E+ +
Sbjct: 185 FFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPNKDGTPSPLLLDRLQKTKEMAQKFPQA 244
Query: 64 KIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
KI +SG V ++ ++ K + + + + A +T GNA + N
Sbjct: 245 KIIVSGGAVKTEFAEADVMAKWLSENGIEKDRLLLDPVARDTPGNAVGIIKLMQTYNGKK 304
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
VL + H+PR L+ Q I YPI
Sbjct: 305 VLGIGTLQHIPRATAVLKG---YAQHIGYPI 332
>gi|228914883|ref|ZP_04078488.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844679|gb|EEM89725.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 166
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 37 QNRLDVALEYLYSHPDVKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 97 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 124
>gi|159038044|ref|YP_001537297.1| hypothetical protein Sare_2461 [Salinispora arenicola CNS-205]
gi|157916879|gb|ABV98306.1| protein of unknown function DUF218 [Salinispora arenicola CNS-205]
Length = 224
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEG 105
A L + + I +G + + + ++ + Q + I + +A NT
Sbjct: 53 ATRLFQAGLFPWIVFTGANAPTTVERFPRGEAVHYREYAVDQGVPPEAILVEPRATNTAE 112
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N + + A + VLI++ Y R + + + V+ + S+ LE + +
Sbjct: 113 NLKFSRALLAERRIPVESVLIMSRPYQQRRAYATCRLVWPEVEVV---CASNPLELDDYV 169
Query: 164 FKIKILRVLL 173
I R ++
Sbjct: 170 RSIGDARRVV 179
>gi|21223012|ref|NP_628791.1| hypothetical protein SCO4629 [Streptomyces coelicolor A3(2)]
gi|20455525|sp|Q04310|Y4629_STRCO RecName: Full=Uncharacterized protein SCO4629
gi|10129725|emb|CAC08282.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 221
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 17/157 (10%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVS-------KDILLQKIPIRQDLAECCIDIGYKALNT 103
E EL + I +G + + ++ + + E I + A NT
Sbjct: 41 ETTAELYHRGMAPVIVFTGATSRTTHERMPRGEAEHYRERAVELGVPERAILVEPNARNT 100
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + A E VL+V+ Y R + +++ V+++ +S +
Sbjct: 101 GENIRLSRALLEDLGMPVTSVLLVSKPYEERRAYATARKLWPNVEWV---CVSTSMTLPD 157
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
+ I R+++ +L+ Q L F I
Sbjct: 158 YVKSIGDARLVID-----MLVGAQQRLMVYPRQGFMI 189
>gi|229155866|ref|ZP_04283967.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
gi|228627473|gb|EEK84199.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
Length = 166
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 37 QNRLDVALEYLYSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 97 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 124
>gi|226365146|ref|YP_002782929.1| hypothetical protein ROP_57370 [Rhodococcus opacus B4]
gi|226243636|dbj|BAH53984.1| hypothetical protein [Rhodococcus opacus B4]
Length = 280
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 22/143 (15%)
Query: 23 IRYVKQMHIPDHPSV-----SAIVVLTGEPIRIERA------FELLENQIGE-------K 64
+ P+ +AI+VL + L+ + +
Sbjct: 98 AIRIASFTPPNPLPAIQGPSTAIIVL--GFGLLPDGTMRPELVNRLQAAMVQSWVSPMSP 155
Query: 65 IFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
I ++G + +++ ++ + I ++A +T GNA + A
Sbjct: 156 IIVTGGNPQNGITEAAAMEGWLRSHGVPADRIHPEHRAGSTVGNALNSVPLARSLGAGGA 215
Query: 123 LIVTHDYHMPRTFLELQRINSTV 145
++VT H+ R ++ V
Sbjct: 216 ILVTSANHIRRATVDFNVAGLPV 238
>gi|327406004|ref|YP_004346842.1| hypothetical protein Fluta_4042 [Fluviicola taffensis DSM 16823]
gi|327321512|gb|AEA46004.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 217
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I +SG + + D ++ ++ + I + Y T +
Sbjct: 75 RIKAAVELYRAGKVKYILVSGDNSITTYDEPTDMKNALVKAGIPANRIFLDYAGFRTLDS 134
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + V++++ +H R
Sbjct: 135 MERA---LKVFGQKEVIVISQQFHNERAIY 161
>gi|253568622|ref|ZP_04846033.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842695|gb|EES70775.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 214
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I ISG + ++ ++K +++ + E I + Y T +
Sbjct: 69 RIDAAVELYKAGKINYILISGDNRKEDYNEPEEMKKALMQKGVPEKSIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + I++ +H R
Sbjct: 129 VVRAKE---VFGQTRLTIISQRFHNERAIY 155
>gi|29345977|ref|NP_809480.1| hypothetical protein BT_0567 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298387372|ref|ZP_06996925.1| protein SanA [Bacteroides sp. 1_1_14]
gi|29337871|gb|AAO75674.1| putative protein involved in barrier function of the cell envelope
[Bacteroides thetaiotaomicron VPI-5482]
gi|298260041|gb|EFI02912.1| protein SanA [Bacteroides sp. 1_1_14]
Length = 214
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I ISG + ++ ++K +++ + E I + Y T +
Sbjct: 69 RIDAAVELYKAGKINYILISGDNRKEDYNEPEEMKKALMQKGVPEKSIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + I++ +H R
Sbjct: 129 VVRAKE---VFGQTRLTIISQRFHNERAIY 155
>gi|297626919|ref|YP_003688682.1| hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922684|emb|CBL57261.1| Hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 354
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 31/195 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELL 57
L L+ + F+ + + +PD ++VL R++RA ++
Sbjct: 148 LGTFLVVMLAQFVVRALFGGRRRVPDP---DVLIVLGSGLINGKVPPLLASRLDRALQVS 204
Query: 58 E----NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+SG ++ + + + + + I + ++ +T N +
Sbjct: 205 AEEALQGRRPMFVVSGGRGSDEPRAEAEAMAEYLTSRGVPDERIIVEDRSRSTRENLVNS 264
Query: 111 SAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
+ + +L VT YH RT + + F+ + +
Sbjct: 265 TRLLRERGIGGPMLAVTSSYHTTRTDVLAADLRLDDVFV-------TGAHTAWYYAPGAY 317
Query: 170 RVLLIEYLKILLLSI 184
L EY+ +L +
Sbjct: 318 ---LREYIGVLTYRL 329
>gi|228920990|ref|ZP_04084327.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838684|gb|EEM83988.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 162
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVALEYLFSHPESKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 93 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 120
>gi|237732197|ref|ZP_04562678.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
gi|226907736|gb|EEH93654.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
Length = 239
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|329297902|ref|ZP_08255238.1| vancomycin high temperature exclusion protein [Plautia stali
symbiont]
Length = 241
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 26/177 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-------DHPSVSAIVVL-------TGE 46
++ ++GLF+ ++ + + R++ P P VVL TG
Sbjct: 4 LKRVFFGLFIIILLVMATALGLDRWISWRTAPFIYEDVASLPHRQVGVVLGTAKYYRTGV 63
Query: 47 PI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYK 99
RI+ A + + +SG + S + +++ I+ + I + Y
Sbjct: 64 INQYYLYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRALIKAGVDPSDIVLDYA 123
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R Q + +Q Y + S
Sbjct: 124 GFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALYIAQHL--GIQAQCYAVPSPK 175
>gi|187736260|ref|YP_001878372.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426312|gb|ACD05591.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
Length = 220
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 13/135 (9%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGV------HHSVSKDILLQKIPI 85
+ I +L IR+ A EL ++ + SG +V + L + +
Sbjct: 19 ELRPAELIFILGSNDIRVAEYAAELYARKLAPLLLFSGGMGRFTGEWAVPEAELFAEAAM 78
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFLELQRIN 142
++ + CI I K+ NT N + + A EK ++ + Y RT LQ
Sbjct: 79 KKGVPGDCILIENKSTNTGENVRFSRAVLEKAGIPEPSSIIALQKPYMERRTLATLQAQW 138
Query: 143 STVQFIPYPIISHDL 157
V+ + S
Sbjct: 139 PEVRV---AVSSPPF 150
>gi|194443111|ref|YP_002040188.1| hypothetical protein SNSL254_A1023 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401774|gb|ACF61996.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 258
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 41/150 (27%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + +
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|78047302|ref|YP_363477.1| hypothetical protein XCV1746 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035732|emb|CAJ23423.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 252
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELL----ENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + +
Sbjct: 92 YGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPS 151
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + + +V+ H+ R L + + ++
Sbjct: 152 SMNTWQNAQFSQPLLRAYRPDRIALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSI 211
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 212 LPQSYNFTLADVALHEYL 229
>gi|325924933|ref|ZP_08186362.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
gi|325544656|gb|EGD16010.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
Length = 253
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELL----ENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + +
Sbjct: 93 YGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + + +V+ H+ R L + + ++
Sbjct: 153 SMNTWQNAQFSQPLLRAYRPDRIALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSI 212
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 213 LPQSYNFTLADVALHEYL 230
>gi|300361824|ref|ZP_07058001.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
gi|300354443|gb|EFJ70314.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
Length = 342
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 26/163 (15%)
Query: 40 IVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIR 86
IVVL RI R E+ N G KI +SG + + + K
Sbjct: 177 IVVLGAGLIGKKVTPLLAARINREIEIYRNNPGSKIIMSGGQGPGEEIPEAAAMAKYAEE 236
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +++ I + K+ T N + + + IVT+ YH+ R + L + +
Sbjct: 237 KGISKQDIIVEDKSKTTRQNLAFSHKLMKAD--SRFAIVTNSYHVYRALV-LAKRM-GLD 292
Query: 147 FIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
I Y + F + + E++ L ++ +L LS
Sbjct: 293 CIGYGAKTK------WYFTLNAF---VREFIAYLTITWRLQLS 326
>gi|110800807|ref|YP_695894.1| hypothetical protein CPF_1451 [Clostridium perfringens ATCC 13124]
gi|110675454|gb|ABG84441.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 257
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 27/150 (18%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT 134
+ E + +LIVT D+H R+
Sbjct: 183 SKKIIENLSGKPIKDLDILIVTTDFHAMRS 212
>gi|237730883|ref|ZP_04561364.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906422|gb|EEH92340.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 254
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 29/150 (19%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV----H 71
D V IVVL G R+ L G K+ +G +
Sbjct: 75 DTQKVEYIVVLGGGYTWNPQWAPSSNLISNSLPRLNEGIRLWRANPGSKLIFTGAAAKSN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + + + I + K +TE A F L+VT H+
Sbjct: 135 NVSTAEAGARVAQSLGVPPGDIITLD-KPKDTEEEAAAVKQAIGSAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENS 161
PR + Q+ P P ++ L +S
Sbjct: 191 PRAMIFFQQAG----LHPLPAPANQLAIDS 216
>gi|118477152|ref|YP_894303.1| hypothetical protein BALH_1456 [Bacillus thuringiensis str. Al
Hakam]
gi|118416377|gb|ABK84796.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 192
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+ + +GF+ + Y K + I+VL RI++A E
Sbjct: 13 IIMVCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEY 69
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L++ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 70 LKSHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPL 129
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 130 IPDN-MKKGMIVTNDFHMFRA 149
>gi|123441863|ref|YP_001005846.1| hypothetical protein YE1552 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088824|emb|CAL11630.1| putative inner membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 255
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 30/195 (15%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W L + + + + + + V IVVL G
Sbjct: 45 LSWLALLLISLQPVADRLLLPLEKQYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFSN 104
Query: 49 ---RIERAFELLENQ-IGEKIFISGVHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ L + +F S + S ++ + I + + +T
Sbjct: 105 SLPRVTEGVRLYRAHPNAKMVFTSSAGPNSQSSAKTAAQVAESLGIPATDIIVLEQPKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----EE 159
A ++ F L+VT H+PR P P ++ L
Sbjct: 165 VEEAAAVASLVGDKPF---LLVTSASHLPRAIKFFTAKG----LHPIPAPANQLAITTPL 217
Query: 160 NSSIFKIKILRVLLI 174
+S I L
Sbjct: 218 HSWERTIPAAAYLGH 232
>gi|170017164|ref|YP_001728083.1| integral membrane protein [Leuconostoc citreum KM20]
gi|169804021|gb|ACA82639.1| Integral membrane protein [Leuconostoc citreum KM20]
Length = 353
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 21/155 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG---E-------PIRIERAFELLENQI 61
L+F+++ F++ ++ ++ P + AIV+ +G RI A + Q+
Sbjct: 153 LVFWVLAFLA-SYFLTKIVKPKYNKEYAIVLGSGLINGDTVSPLLGSRILVAAKFKAKQL 211
Query: 62 GE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ + +SG + + + ++ I+ + E I + ++ NT N +
Sbjct: 212 AKSKKKMILIMSGGQGSDEKLPESVAMKAYAIKNGVPESDILVDDQSKNTYQNMLFSKQV 271
Query: 114 AEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQ 146
N + T+DYH+ R + + +
Sbjct: 272 IIDNGLDLQKGIFTTNDYHVFRAAGFARLVGLNID 306
>gi|172057015|ref|YP_001813475.1| hypothetical protein Exig_0978 [Exiguobacterium sibiricum 255-15]
gi|171989536|gb|ACB60458.1| protein of unknown function DUF218 [Exiguobacterium sibiricum
255-15]
Length = 195
Score = 44.9 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQ 60
+ +F +G F+ + ++VL RIE A +
Sbjct: 24 AVFWFSIG--WFVAK--GERPLANGKHPYVIVLGAGVKGETPSLILSNRIEAAARYGKQF 79
Query: 61 IGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+SG ++S+ +++ I+ ++E + + ++ +T N + +
Sbjct: 80 PDTTFILSGGQGDGEAISEAEAMRRGMIQAGISEERLLLEDQSTSTTENLTFSKRLLPAS 139
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
V IVT D+H+ R E ++N IP
Sbjct: 140 ENR-VSIVTSDFHLYRARKEAAQMNLKTDAIP 170
>gi|213157818|ref|YP_002320616.1| hypothetical protein AB57_3302 [Acinetobacter baumannii AB0057]
gi|213056978|gb|ACJ41880.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
Length = 189
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL- 56
+F+ L+ ++ F +FI+ K + P+V AI+VL R++ A +
Sbjct: 3 VFLDLVNWLRLFFNFIKENKDAS-QNLPAVKAIIVLGSGVENGQPSAILAKRLDTAAPVA 61
Query: 57 LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L + I G+ S + + + + +A+ + + K+ +TE N + +
Sbjct: 62 LSQPQAKVILTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPL 121
Query: 114 AEKNNFHH---VLIVTHDYHMPRTFL 136
E+ + + + IVT D+H PR
Sbjct: 122 LEQAHINANQPIAIVTSDFHTPRAAA 147
>gi|300983094|ref|ZP_07176438.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
gi|300306998|gb|EFJ61518.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
Length = 181
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 43/152 (28%), Gaps = 25/152 (16%)
Query: 38 SAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSK 76
IVVL G R+ L G K+ +G + +
Sbjct: 2 DYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTA 61
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ + E I + +TE A F L+VT H+PR +
Sbjct: 62 EVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMI 117
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q+ P ++ D N I
Sbjct: 118 FFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 149
>gi|94969638|ref|YP_591686.1| hypothetical protein Acid345_2611 [Candidatus Koribacter versatilis
Ellin345]
gi|94551688|gb|ABF41612.1| protein of unknown function DUF218 [Candidatus Koribacter
versatilis Ellin345]
Length = 202
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 20/144 (13%)
Query: 9 FVCLIFFIMGFISFIRY-----VKQMHIPDHPSVSAIVVLTGEPI-----------RIER 52
+ L + G + F + ++Q + V AIVV G R++
Sbjct: 13 ALVLTVVVAGALFFYAWTCVRVMQQAETDERRPVDAIVVF-GAAEYSGRPSPVLKARLDH 71
Query: 53 AFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+L + + + G S+ + + ++ + + + + +T +A+
Sbjct: 72 GLDLFRQDMAPFVITTGGAGGDLHFSEGGVGRDYLLKNGVPDASLIGETQGGDTAQSAER 131
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPR 133
+ N L V+ YH+ R
Sbjct: 132 VAVIMRTNGMKTCLAVSDAYHLFR 155
>gi|320531184|ref|ZP_08032171.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320136601|gb|EFW28562.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
Length = 355
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 21/152 (13%)
Query: 47 PIRIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI + + + + +SG V VS+ + I + + I +
Sbjct: 189 GSRIAGGIDAWREEEALRPGAPLLVMSGGQGVDEPVSEARAMADYAIARGIPPKRILLED 248
Query: 99 KALNTEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++ T N + VL+VT +H RT + + +P+ +
Sbjct: 249 RSTTTRTNISCTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMG-----VPWAVAPAR 303
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ + + L EY+ +L + +L
Sbjct: 304 ---TAWFYIVNAW---LREYVAVLTYRRRPAL 329
>gi|301053815|ref|YP_003792026.1| hypothetical protein BACI_c22410 [Bacillus anthracis CI]
gi|300375984|gb|ADK04888.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 185
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLYSHPDVKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 143
>gi|325680889|ref|ZP_08160426.1| putative membrane protein [Ruminococcus albus 8]
gi|324107353|gb|EGC01632.1| putative membrane protein [Ruminococcus albus 8]
Length = 497
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 22/147 (14%)
Query: 47 PIRIERAFELL-----ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R++RA E G K SG +S+ +++ I + +++ I
Sbjct: 339 AGRVDRAIEFANAQKAATGKGIKFVPSGGQGSDEVISEAESMRRYLISKGISDDDIIAED 398
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIV--THDYHMPRTFLELQRINSTVQFIPYPIISHD 156
K+ NTE N + + + IV T +YH+ R+ + I+ + S
Sbjct: 399 KSANTEENMRFSLEKIRA-DCEEPKIVFSTSNYHVLRSGI----ISKNEGLDADGVGSK- 452
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLS 183
F + E++ +L+
Sbjct: 453 ---TRWYFWPNAA---VREFVGLLVSK 473
>gi|168216315|ref|ZP_02641940.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182625617|ref|ZP_02953387.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177909169|gb|EDT71640.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182381802|gb|EDT79281.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 206
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + LE K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNFHH--VLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHADKDEVLIVTSDFHLFRA 156
>gi|168209230|ref|ZP_02634855.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712695|gb|EDT24877.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 206
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + LE K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNFHH--VLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHADKDEVLIVTSDFHLFRA 156
>gi|169342569|ref|ZP_02863622.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169299341|gb|EDS81408.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 206
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + LE K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNFHH--VLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHADKDEVLIVTSDFHLFRA 156
>gi|110800413|ref|YP_695257.1| hypothetical protein CPF_0806 [Clostridium perfringens ATCC 13124]
gi|110675060|gb|ABG84047.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 206
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + LE K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNFHH--VLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHADKDEVLIVTSDFHLFRA 156
>gi|238913237|ref|ZP_04657074.1| hypothetical protein SentesTe_19229 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 258
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|307130739|ref|YP_003882755.1| hypothetical protein Dda3937_03495 [Dickeya dadantii 3937]
gi|306528268|gb|ADM98198.1| predicted protein [Dickeya dadantii 3937]
Length = 251
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVSYLLLSGDNAQQSYNEPMTMRRDLIAAGVPPTNIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDFT---IITQRFHCERAL--FIALHKGIQAQCFAVPSPK 173
>gi|313674752|ref|YP_004052748.1| hypothetical protein Ftrac_0638 [Marivirga tractuosa DSM 4126]
gi|312941450|gb|ADR20640.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 204
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + +SG + + + + + +++ + E I I L+T
Sbjct: 68 NRMDAAAELFHKGKVKGLLLSGDNRTRYYNEPSDMKKAL-MKKGVPENVISIDTAGLSTI 126
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + V I+T ++H R
Sbjct: 127 ESVYRCKEIFKHQD---VAIITQEFHAFRALY 155
>gi|260598609|ref|YP_003211180.1| vancomycin high temperature exclusion protein [Cronobacter
turicensis z3032]
gi|260217786|emb|CBA32240.1| Protein sanA [Cronobacter turicensis z3032]
Length = 216
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 48 RIQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 107
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 108 IVRTRRVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 152
>gi|259908016|ref|YP_002648372.1| hypothetical protein EpC_13560 [Erwinia pyrifoliae Ep1/96]
gi|224963638|emb|CAX55135.1| Vancomycin resistance protein [Erwinia pyrifoliae Ep1/96]
gi|283477911|emb|CAY73827.1| Protein sanA [Erwinia pyrifoliae DSM 12163]
Length = 237
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 26/177 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-------DHPSVSAIVVL-------TGE 46
++ YGL + + + R+V P P VVL TG
Sbjct: 2 LKRLIYGLIIIITLISATALGLDRWVSWKTAPYVYDDLTALPHRQVGVVLGTAKFYRTGG 61
Query: 47 PI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYK 99
R++ A + + +SG + S + +++ I + I + Y
Sbjct: 62 INQYYLYRMQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIAAGVDPSDIVLDYA 121
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R L ++ +Q Y + S
Sbjct: 122 GFRTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--LIALHMGIQAQCYAVPSPK 173
>gi|294626655|ref|ZP_06705252.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665846|ref|ZP_06731114.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599075|gb|EFF43215.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604356|gb|EFF47739.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 252
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELL----ENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + +
Sbjct: 92 YGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPS 151
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + + +V+ H+ R L + + ++
Sbjct: 152 SMNTWQNAQFSQPLLRDYRPDRIALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSI 211
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 212 LPQSYNFTLADVALHEYL 229
>gi|30262287|ref|NP_844664.1| hypothetical protein BA_2278 [Bacillus anthracis str. Ames]
gi|47527579|ref|YP_018928.1| hypothetical protein GBAA_2278 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185134|ref|YP_028386.1| hypothetical protein BAS2124 [Bacillus anthracis str. Sterne]
gi|49479213|ref|YP_036390.1| hypothetical protein BT9727_2062 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65319584|ref|ZP_00392543.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|118477705|ref|YP_894856.1| hypothetical protein BALH_2039 [Bacillus thuringiensis str. Al
Hakam]
gi|167632793|ref|ZP_02391119.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|177649292|ref|ZP_02932294.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196039956|ref|ZP_03107259.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046918|ref|ZP_03114139.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218903420|ref|YP_002451254.1| hypothetical protein BCAH820_2304 [Bacillus cereus AH820]
gi|225864256|ref|YP_002749634.1| hypothetical protein BCA_2360 [Bacillus cereus 03BB102]
gi|229600915|ref|YP_002866624.1| hypothetical protein BAA_2343 [Bacillus anthracis str. A0248]
gi|254684861|ref|ZP_05148721.1| hypothetical protein BantC_13530 [Bacillus anthracis str.
CNEVA-9066]
gi|254722269|ref|ZP_05184057.1| hypothetical protein BantA1_07359 [Bacillus anthracis str. A1055]
gi|254737308|ref|ZP_05195012.1| hypothetical protein BantWNA_19319 [Bacillus anthracis str. Western
North America USA6153]
gi|254743507|ref|ZP_05201192.1| hypothetical protein BantKB_21307 [Bacillus anthracis str. Kruger
B]
gi|254751624|ref|ZP_05203661.1| hypothetical protein BantV_04116 [Bacillus anthracis str. Vollum]
gi|254760143|ref|ZP_05212167.1| hypothetical protein BantA9_17676 [Bacillus anthracis str.
Australia 94]
gi|30256918|gb|AAP26150.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47502727|gb|AAT31403.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179061|gb|AAT54437.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330769|gb|AAT61415.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118416930|gb|ABK85349.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|167531605|gb|EDR94270.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|172084366|gb|EDT69424.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196022293|gb|EDX60979.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196029215|gb|EDX67819.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218536887|gb|ACK89285.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786065|gb|ACO26282.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|229265323|gb|ACQ46960.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 185
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLYSHPDVKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 143
>gi|197105490|ref|YP_002130867.1| hypothetical protein PHZ_c2027 [Phenylobacterium zucineum HLK1]
gi|196478910|gb|ACG78438.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 186
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 13/154 (8%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI ++ + G ++ SG H S+ ++ + LA + + ++L+T +
Sbjct: 38 RIGYGWQAAQAHPGAQVLCSGGVGRHGPSEASVMAERLAALGLAAERLILDEESLDTLQS 97
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + W + V++ + YH+PR L L + + + L
Sbjct: 98 AGAVARWRRRLGAADVVVCSDAYHVPRIRLLLGALGTP------SVAGPRLPGRGGAGLA 151
Query: 167 KILRVLLIE-----YLKILLLSIQLSLSTQTASQ 195
R+ L E Y L ++ + L+ +
Sbjct: 152 HWTRMSLREGLAIPYDLALAIAQRRRLAGLAPTA 185
>gi|165870553|ref|ZP_02215207.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639676|ref|ZP_02397946.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686976|ref|ZP_02878195.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706657|ref|ZP_02897116.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|190565393|ref|ZP_03018313.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196033843|ref|ZP_03101254.1| conserved hypothetical protein [Bacillus cereus W]
gi|227814904|ref|YP_002814913.1| hypothetical protein BAMEG_2315 [Bacillus anthracis str. CDC 684]
gi|228927349|ref|ZP_04090406.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228933586|ref|ZP_04096436.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945900|ref|ZP_04108243.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229091270|ref|ZP_04222488.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|229121834|ref|ZP_04251054.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|164713708|gb|EDR19231.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512385|gb|EDR87761.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128388|gb|EDS97256.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669027|gb|EDT19771.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|190563420|gb|EDV17385.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195993523|gb|EDX57480.1| conserved hypothetical protein [Bacillus cereus W]
gi|227005837|gb|ACP15580.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228661623|gb|EEL17243.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|228692036|gb|EEL45777.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|228813774|gb|EEM60052.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826046|gb|EEM71829.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228832245|gb|EEM77825.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 166
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 37 QNRLDVALEYLYSHPDVKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 97 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 124
>gi|21242461|ref|NP_642043.1| hypothetical protein XAC1712 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107907|gb|AAM36579.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 253
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 47 PIRIERAFELL----ENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + L + KI ISG +S+ ++ Q++ + + + +
Sbjct: 93 YGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPS 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
++NT NAQ + + +V+ H+ R L + + ++
Sbjct: 153 SMNTWQNAQFSQPLLRDYRPDRIALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSI 212
Query: 160 NSSIFKIKILRVLLIEYL 177
+ + V L EYL
Sbjct: 213 LPQSYNFTLADVALHEYL 230
>gi|89514136|gb|ABD74926.1| hypothetical protein [Sinorhizobium fredii]
Length = 151
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 6/101 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQ-DLAECCIDIGYKAL 101
R+ A L+ + I G ++ + + + + + +
Sbjct: 16 RERMATAVRALKAGMAPLILACGWPYRDDSDLAIADAMASFATEELQVDSDKVLVERTSR 75
Query: 102 NTEGNAQEA-SAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+T G+A + +A + +L VT YH RT +
Sbjct: 76 DTVGDAVFSKRNFAIPFGWKRILTVTSSYHQARTLAIFSFV 116
>gi|42781376|ref|NP_978623.1| hypothetical protein BCE_2312 [Bacillus cereus ATCC 10987]
gi|229196506|ref|ZP_04323250.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
gi|42737298|gb|AAS41231.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|228586862|gb|EEK44936.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
Length = 185
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLVSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 116 YENLKFS---IDLYDVKHAVVVSNTYHLYRT 143
>gi|294140297|ref|YP_003556275.1| hypothetical protein SVI_1526 [Shewanella violacea DSS12]
gi|293326766|dbj|BAJ01497.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 247
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + K+ +SG ++ + ++ + + I A +T
Sbjct: 106 RLTEGVRQYKLGKDCKLIVSGWGGSASKTPHAKIMAEAALQFGIPKERIITFPLAKDTIE 165
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ F +VT HMPR+ + P + + ++
Sbjct: 166 EAQYFKWDVGNYPFR---LVTSASHMPRSMAIF----HSQGLRPQAAPTDFITRQGYWWQ 218
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+ +L + EY+ L ++
Sbjct: 219 LDANNLLSSQRAIHEYVGRLWFKLK 243
>gi|206971658|ref|ZP_03232608.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206733643|gb|EDZ50815.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 185
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|226355402|ref|YP_002785142.1| hypothetical protein Deide_05490 [Deinococcus deserti VCD115]
gi|226317392|gb|ACO45388.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 256
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 57/188 (30%), Gaps = 25/188 (13%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------PIRIERAFE 55
L VCL+ ++ + +P IVVL G R+ R E
Sbjct: 59 LAVCLLTPVLRAPLQALTLAGSPVP----ADVIVVLGGGVQCGTRAQAPSSAARLVRGLE 114
Query: 56 LLENQIGEKIFIS------GVHHSVSKDILLQ--KIPIRQDLAECCIDIGYKALNTEGNA 107
L + +S G +L + + + + + T A
Sbjct: 115 LWRAGYAPAMTVSEPSGLIGPADCPRLSVLQRGQITSLYPRGGPEVLTL-SRVTTTRDEA 173
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
A+ + VL+VT H R Q +V +P D ++
Sbjct: 174 ARVRQLAQSRGWEQVLLVTSPSHSRRAARLFQAYGLSVVSVPADETLFDTTLPLPSDRLY 233
Query: 168 ILRVLLIE 175
+RVLL E
Sbjct: 234 AVRVLLYE 241
>gi|146312389|ref|YP_001177463.1| hypothetical protein Ent638_2747 [Enterobacter sp. 638]
gi|145319265|gb|ABP61412.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 239
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|251790002|ref|YP_003004723.1| hypothetical protein Dd1591_2403 [Dickeya zeae Ech1591]
gi|247538623|gb|ACT07244.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 251
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVSYLLLSGDNAQQSYNEPMTMRRDLIAAGVPPANIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDFT---IITQRFHCERAL--FIALHKGIQAQCFAVPSPK 173
>gi|310768073|gb|ADP13023.1| hypothetical protein EJP617_33420 [Erwinia sp. Ejp617]
Length = 237
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 26/177 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-------DHPSVSAIVVL-------TGE 46
++ YGL + + + R+V P P VVL TG
Sbjct: 2 LKRLIYGLIIIITLISATALGLDRWVSWKTAPYVYDDLTALPHRQVGVVLGTAKFYRTGG 61
Query: 47 PI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYK 99
R++ A + + +SG + S + +++ I + I + Y
Sbjct: 62 INQYYLYRMQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIAAGVDPSDIVLDYA 121
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R L ++ +Q Y + S
Sbjct: 122 GFRTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--LIALHMGIQAQCYAVPSPK 173
>gi|156933279|ref|YP_001437195.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
gi|156531533|gb|ABU76359.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
Length = 237
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRRVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|119945885|ref|YP_943565.1| hypothetical protein Ping_2225 [Psychromonas ingrahamii 37]
gi|119864489|gb|ABM03966.1| hypothetical protein DUF218 [Psychromonas ingrahamii 37]
Length = 254
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 31/163 (19%)
Query: 5 WYGLFVCLIFFIMGFI----SFIRYVKQMHIPDHPSVSA---IVVLTGEP---------- 47
+ L ++ F++ F+ ++ +++ + P I+VL
Sbjct: 41 FNLLVSFILLFLLSFMPVSEQLVQPLERQYPPVMQPAQNFKYILVLGSGGIADPSLPVTG 100
Query: 48 -------IRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLA-ECCIDIG 97
R A L + +SG + S +L+Q++ + ++ + I +
Sbjct: 101 QLSAVALSRFVEALRLYHANPNATLVVSGGNFGDIKSHALLMQELAMAMNIPKDNIIRLD 160
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
NT EA ++ ++VT HMPR+ ++
Sbjct: 161 ----NTLDTDDEAKQMSKIIKGQSAVLVTSATHMPRSMGLFKQ 199
>gi|228900299|ref|ZP_04064529.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
gi|228859334|gb|EEN03764.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
Length = 172
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
MGF+ + Y K H+ I+VL RI++A E L++
Sbjct: 1 MGFLQYHIY-KHGHMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKTI 57
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + +++ I+Q++AE I + K+ +T+ N + +
Sbjct: 58 AIVSGGQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPA-DMKK 116
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 117 GMIVTNDFHMFRA 129
>gi|257067909|ref|YP_003154164.1| hypothetical protein Bfae_07170 [Brachybacterium faecium DSM 4810]
gi|256558727|gb|ACU84574.1| uncharacterized conserved protein [Brachybacterium faecium DSM
4810]
Length = 338
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)
Query: 4 FWYGLFVCLIFFIMG--FISFI-RYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
G + LI +G F+ F+ V P S + I+V R+
Sbjct: 122 LGIGALLALIALHVGIAFLVFLCASVPYQLFPKQLSTTGIIVHGSGLIRGQVTKLLRGRL 181
Query: 51 ERAF----ELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+RA LL I + SG + + + + I +
Sbjct: 182 DRAVAERERLLRLGIDPLLVPSGGRGEDEPRSEGSAMAEYLQEEAGIPAERIHAETASRT 241
Query: 103 TEGNAQEASAWAEKNNFHHVLIV-THDYHMPRTFLELQRINSTVQFIP-----YPIISHD 156
TE N + ++ H +V T YH R L + + + I Y + S
Sbjct: 242 TEENLTLSHRILDEAGHHGPYVVSTSRYHAFRAALLARGLGYDDEAIGGPTAFYYVPSAT 301
Query: 157 LEE 159
L E
Sbjct: 302 LRE 304
>gi|283785953|ref|YP_003365818.1| hypothetical protein ROD_22721 [Citrobacter rodentium ICC168]
gi|282949407|emb|CBG89020.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 239
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAMQSYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|269104711|ref|ZP_06157407.1| hypothetical protein VDA_000868 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161351|gb|EEZ39848.1| hypothetical protein VDA_000868 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 215
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-VHHSV------SKDILLQKIP 84
+ IVVL +R+ ERA EL + K+ SG V S+ I
Sbjct: 21 NLKPADCIVVLGSNDVRVAERAAELFHLGLSSKVLFSGGVGELTQNMFDCSEAEAFASIA 80
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIV 125
+ + + I I ++ NT N + ++ +L+V
Sbjct: 81 MSLGVPQDAILIESRSTNTGENILFSQQLFDQERINPQSILLV 123
>gi|120436534|ref|YP_862220.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
gi|117578684|emb|CAL67153.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
Length = 209
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTE 104
R++ A L +N ++G H S + + + + + + I + L+T
Sbjct: 68 QDRVDTAIRLYKNDKVSNFLVTGDHRSDDYNEVAAMVGYLEEKGIDKKLIISDHAGLDTY 127
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A E N ++VT +H+PRT
Sbjct: 128 DSMYRAGKLFEVEN---AIVVTQKFHLPRTLF 156
>gi|18310223|ref|NP_562157.1| hypothetical protein CPE1241 [Clostridium perfringens str. 13]
gi|18144902|dbj|BAB80947.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 257
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCDYIVVLGAGIRGENLTATLRDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT-FLELQRINSTVQFI 148
+ E + +L++T D+H R+ L + + V
Sbjct: 183 SKKIIENLSGKPIKDLDILVITTDFHAMRSNLLAKRNGYNNVDLY 227
>gi|255263139|ref|ZP_05342481.1| periplasmic protein [Thalassiobium sp. R2A62]
gi|255105474|gb|EET48148.1| periplasmic protein [Thalassiobium sp. R2A62]
Length = 153
Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 20/156 (12%)
Query: 39 AIVVLTGEPI-----RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLA 90
V P R L ++I G H S+ + + + +
Sbjct: 8 GAAVWADGPSPTLKRRTLHGAALYHAGKIDRIICCGGLGKHPP-SEAEAMAHLLQNEGIP 66
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
I + ++ T N A + V I+T YH PR L +R
Sbjct: 67 TADIILEDQSTTTGENIANALPLLDT---SSVTIITDWYHAPRACLVARRAG----LKAT 119
Query: 151 PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
LR E+ ++ ++L
Sbjct: 120 GSAPSLRGARIWPQTKATLR----EFPAYVVYLLRL 151
>gi|322616420|gb|EFY13329.1| hypothetical protein SEEM315_12463 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619670|gb|EFY16545.1| hypothetical protein SEEM971_17457 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622634|gb|EFY19479.1| hypothetical protein SEEM973_13500 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629783|gb|EFY26558.1| hypothetical protein SEEM974_05201 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632495|gb|EFY29241.1| hypothetical protein SEEM201_14830 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637010|gb|EFY33713.1| hypothetical protein SEEM202_02105 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641450|gb|EFY38088.1| hypothetical protein SEEM954_01478 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646084|gb|EFY42600.1| hypothetical protein SEEM054_01055 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649614|gb|EFY46045.1| hypothetical protein SEEM675_15999 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654084|gb|EFY50407.1| hypothetical protein SEEM965_12752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658616|gb|EFY54878.1| hypothetical protein SEEM19N_16617 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663473|gb|EFY59675.1| hypothetical protein SEEM801_11907 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670209|gb|EFY66349.1| hypothetical protein SEEM507_18684 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671445|gb|EFY67567.1| hypothetical protein SEEM877_09693 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676801|gb|EFY72868.1| hypothetical protein SEEM867_07841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682726|gb|EFY78745.1| hypothetical protein SEEM180_06892 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686405|gb|EFY82387.1| hypothetical protein SEEM600_05870 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195928|gb|EFZ81095.1| hypothetical protein SEEM581_13156 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199784|gb|EFZ84873.1| hypothetical protein SEEM501_09338 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202777|gb|EFZ87813.1| hypothetical protein SEEM460_08274 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209048|gb|EFZ93985.1| hypothetical protein SEEM020_20040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211524|gb|EFZ96363.1| hypothetical protein SEEM6152_19328 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217991|gb|EGA02706.1| hypothetical protein SEEM0077_06149 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222903|gb|EGA07253.1| hypothetical protein SEEM0047_13265 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226597|gb|EGA10802.1| hypothetical protein SEEM0055_10125 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229793|gb|EGA13916.1| hypothetical protein SEEM0052_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233018|gb|EGA17114.1| hypothetical protein SEEM3312_03134 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240753|gb|EGA24795.1| hypothetical protein SEEM5258_12744 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243069|gb|EGA27090.1| hypothetical protein SEEM1156_20594 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249768|gb|EGA33670.1| hypothetical protein SEEM9199_12237 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252759|gb|EGA36597.1| hypothetical protein SEEM8282_16778 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257198|gb|EGA40899.1| hypothetical protein SEEM8283_02209 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259996|gb|EGA43624.1| hypothetical protein SEEM8284_18093 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268003|gb|EGA51482.1| hypothetical protein SEEM8285_13226 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269851|gb|EGA53300.1| hypothetical protein SEEM8287_20649 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 258
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRNDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|307273126|ref|ZP_07554372.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
gi|306510111|gb|EFM79135.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
Length = 360
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|332798404|ref|YP_004459903.1| hypothetical protein TepRe1_0394 [Tepidanaerobacter sp. Re1]
gi|332696139|gb|AEE90596.1| protein of unknown function DUF218 [Tepidanaerobacter sp. Re1]
Length = 193
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 27/191 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
R + +FV L F+ I + D V +++L R++
Sbjct: 4 RLLFIIVFVLLFSFL---IIESLIIVNSFSNDDMPVDYMIILGAGLYGDEPSPSLRYRLQ 60
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN-- 106
+A E I +SG + +S+ +Q+ ++ + E I + NT N
Sbjct: 61 QALEYANKYPQVPIVVSGGQGSNEWISEAEAMQRFLVKHGIKEERIIKEDCSTNTGENLL 120
Query: 107 -AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
A+E + K V+IVT +YHM R+ +R FIPY I + +
Sbjct: 121 FAREVIKYTGKAERPKVMIVTSEYHMFRSKFLARRYG----FIPYGICAPTPAYPRYLKP 176
Query: 166 IKILRVLLIEY 176
+ +R EY
Sbjct: 177 LYYIR----EY 183
>gi|229096200|ref|ZP_04227173.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
gi|229102312|ref|ZP_04233021.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|229115155|ref|ZP_04244565.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228668295|gb|EEL23727.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228681213|gb|EEL35381.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|228687160|gb|EEL41065.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
Length = 159
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L++ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKTIAIVSGGQGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++Q++AE I + K+ +T+ N + N +IVT+D+HM R
Sbjct: 65 QGLMKQNIAEDRIIMEDKSTSTDENITFSKPLIPAN-MKKGMIVTNDFHMFRA 116
>gi|261340583|ref|ZP_05968441.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
gi|288316993|gb|EFC55931.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
Length = 237
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAQQSYNEPVTMRKDLIAGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|149188918|ref|ZP_01867208.1| SanA protein [Vibrio shilonii AK1]
gi|148837338|gb|EDL54285.1| SanA protein [Vibrio shilonii AK1]
Length = 241
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A +L +SG H S ++ +++ +R ++ E I + Y T
Sbjct: 83 SHRIEAAIDLYNEGKVSHFLLSGDNAHRSYNEPWTMKRDLLRAEVPEPAIHLDYAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + ++F LI+T +H R
Sbjct: 143 DSIVRAKKIFDTDDF---LIITQKFHCERALF 171
>gi|204929871|ref|ZP_03220892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320865|gb|EDZ06066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 258
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRNDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|108797853|ref|YP_638050.1| hypothetical protein Mmcs_0878 [Mycobacterium sp. MCS]
gi|119866947|ref|YP_936899.1| hypothetical protein Mkms_0895 [Mycobacterium sp. KMS]
gi|108768272|gb|ABG06994.1| protein of unknown function DUF218 [Mycobacterium sp. MCS]
gi|119693036|gb|ABL90109.1| protein of unknown function DUF218 [Mycobacterium sp. KMS]
Length = 193
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + + I ++G + VS+ ++++ + + I + KA +T N
Sbjct: 65 RVITGLTVAQFFPQSPIIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQN 124
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFK 165
A+ + AEK +++VT H R + + + YP S +
Sbjct: 125 ARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAGANLLATVSYPDGSPQVNAAQFARD 184
>gi|283832427|ref|ZP_06352168.1| protein SanA [Citrobacter youngae ATCC 29220]
gi|291072081|gb|EFE10190.1| protein SanA [Citrobacter youngae ATCC 29220]
Length = 239
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + + + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNAQQNYNEPMTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|322649357|gb|EFY45793.1| hypothetical protein SEEM675_08605 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 261
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|226307188|ref|YP_002767148.1| hypothetical protein RER_37010 [Rhodococcus erythropolis PR4]
gi|226186305|dbj|BAH34409.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 17/147 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RI 50
R G + + + G + V ++ D AIVVL G R+
Sbjct: 29 RRLIAGAVLMAVVLVGGTAFRVWQVARID--DTRPADAIVVL-GAAQYSGTPSSVFEARL 85
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E+A++L + + +I G ++ + + + I +T +
Sbjct: 86 EQAYKLYKRGVAPQIITVGGKQEGDEYTEAASGKMYLTDRGIPSSAITAVETGSDTLLSI 145
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRT 134
SA + ++V+ +H RT
Sbjct: 146 DAVSAEMSSQGINSAVLVSDPWHSLRT 172
>gi|295837334|ref|ZP_06824267.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826490|gb|EFG64900.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 222
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 22/150 (14%)
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTE 104
R+ EL + E + +G + + + ++ I + I + A NT
Sbjct: 48 RSAELYRAGLFETLVFTGGNSPTTAKVFPRGEAIHFREHAIDLGVPADAILLEPHAANTG 107
Query: 105 GNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
N + + H VL+V+ Y R+F +++ V+F+ S LE +
Sbjct: 108 ENITLSREVLAASGIHPATVLLVSKPYMERRSFATARKLWPDVEFL---CASERLEFDDY 164
Query: 163 IFKIKILRVLL----------IEYLKILLL 182
+ I +++L IEY K+
Sbjct: 165 LRSIGDEKLVLDMLAGDLQRVIEYPKLGFA 194
>gi|238789306|ref|ZP_04633093.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
gi|238722638|gb|EEQ14291.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
Length = 234
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 47/170 (27%), Gaps = 26/170 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------- 48
W L + + + + + + V IVVL G
Sbjct: 22 ALSWLVLLLISLQPVADRLLLPLEKQYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFA 81
Query: 49 ----RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L K+ +G + S Q AE I + +
Sbjct: 82 NSLPRVTEGIRLYRAHPDAKMVFTGGAGPNSQSSARTAAQVAESLGVPAENIIALD-QPK 140
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+T A ++ F L+VT H+PR + + I P
Sbjct: 141 DTVEEAAAVASLVGDKPF---LLVTSASHLPRAMKFF--VAKGLHPIAAP 185
>gi|223042665|ref|ZP_03612714.1| membrane protein [Staphylococcus capitis SK14]
gi|222444328|gb|EEE50424.1| membrane protein [Staphylococcus capitis SK14]
Length = 320
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 29/153 (18%)
Query: 1 MRYFWYGLFVCLIFF--IMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PI 48
+ Y F+C I + G F + V I+VL
Sbjct: 120 IAYSTIFAFICYISWSSAYGSHLFSKNV-----------DLIMVLGAGIFTEEVTPMLAE 168
Query: 49 RIERAFELLE-NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A ++ E + + +SG +++ + +++ I + + E I + ++ NT
Sbjct: 169 RLNCAIKVYESQKHSPYMLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEEQSTNTY 228
Query: 105 GNAQEASAWAEKNNFHH--VLIVTHDYHMPRTF 135
N Q + EK+ L VT +H+ R+
Sbjct: 229 TNFQYSKPIIEKHFGRRAQFLCVTSQFHILRSL 261
>gi|324325732|gb|ADY20992.1| hypothetical protein YBT020_08730 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 192
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 19/141 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+ + +GF+ + Y K + I+VL RI++A E
Sbjct: 13 IIMVCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEY 69
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L++ +SG +S+ + ++ ++ + E I + K+ +T+ N + +
Sbjct: 70 LKSHEKAIAIVSGGKGKGEDISEALAMKNGLMKLKIEEDRIIMEDKSTSTDENIKFSKPL 129
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 130 IPDN-MKKGMIVTNDFHMFRA 149
>gi|229161248|ref|ZP_04289235.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
gi|228622344|gb|EEK79183.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
Length = 166
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + + I I ++ NT
Sbjct: 37 QNRLDVALEYLYSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDDSRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 97 YENVKFSMDL---YDVKHAVVVSNTYHLYRT 124
>gi|310818213|ref|YP_003950571.1| hypothetical protein STAUR_0940 [Stigmatella aurantiaca DW4/3-1]
gi|309391285|gb|ADO68744.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 254
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 16/155 (10%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L + + +SG + D +++ + + L E + L+T
Sbjct: 112 AQRLDTAIALWREKKVGGVLVSGDNSDRFHDETRAMRRYLLERGLPETAVQGDNSGLSTY 171
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A L+VT +H+PR I + +
Sbjct: 172 DSCVRAYD---VFGMRRALLVTQRFHLPRALY-----------IANSVGMDAWGVAADEG 217
Query: 165 KIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
R +L E +L I + L + AS +
Sbjct: 218 HPSTQRYVLRETFSRVLALIMVLLDLKPASSAPAS 252
>gi|168822078|ref|ZP_02834078.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|197247984|ref|YP_002145908.1| hypothetical protein SeAg_B0996 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197211687|gb|ACH49084.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205341539|gb|EDZ28303.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085232|emb|CBY95017.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 258
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 42/150 (28%), Gaps = 25/150 (16%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + ++
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + K +TE A F L+VT H+PR +
Sbjct: 142 GARVAQSLGVPRSDIITLD-KPKDTEEEAVAVKQAIGDAPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKI 168
Q P ++ D N I
Sbjct: 198 QHAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|197334804|ref|YP_002156375.1| SanA protein [Vibrio fischeri MJ11]
gi|197316294|gb|ACH65741.1| SanA protein [Vibrio fischeri MJ11]
Length = 209
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + +SG H S ++ +++ ++ + E I + Y T +
Sbjct: 59 RIDAAIELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPEDRITLDYAGFRTLDS 118
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Q A + N + IV+ +H R
Sbjct: 119 VQRAKEIFDAN---SLTIVSQQFHCQRAVF 145
>gi|325499862|gb|EGC97721.1| hypothetical protein ECD227_3959 [Escherichia fergusonii ECD227]
Length = 203
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + D +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAELYHAGKVKWLLVSGDNGRKNYDETSGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|297199506|ref|ZP_06916903.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197712947|gb|EDY56981.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 228
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 20/166 (12%)
Query: 11 CLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTGE----------PIRIERAFELLEN 59
C++ + ++ ++ D P VV R++ A +L
Sbjct: 29 CVLALLPSTWMYVVTGDRLRTTADVPRTEVAVVFGAGLWDGEPSPYLAHRLDAAAKLYRE 88
Query: 60 QIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + ++G + D ++ R + + I Y +T + A
Sbjct: 89 NRIEVVLVTGDNSREDYDEPDAMRAYLTRHGVPDTRIVSDYAGFDTWDSCVRARKIF--- 145
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
H ++++ +H+ R Q Y I + +
Sbjct: 146 GVHQAVLISQGFHIRRAVALCQAAG----VTSYGIGVDARHDATWY 187
>gi|315150439|gb|EFT94455.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 344
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP SV I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKSVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|146292475|ref|YP_001182899.1| hypothetical protein Sputcn32_1372 [Shewanella putrefaciens CN-32]
gi|145564165|gb|ABP75100.1| protein of unknown function DUF218 [Shewanella putrefaciens CN-32]
gi|319425777|gb|ADV53851.1| protein of unknown function DUF218 [Shewanella putrefaciens 200]
Length = 231
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L + +SG +S ++ K + + + I A +T
Sbjct: 92 RLSEGIRQLGLGQDCILIVSGWGGELTQISHAEMMAKAAVELGVDKSKIIQFPLARDTLE 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-DLEENSSIF 164
AQ W + +VT HMPR + + ++
Sbjct: 152 EAQYL-KW--ELGDSSFRLVTSASHMPRAMAIFT----GKGLLASAAPTDFRARDDFWWR 204
Query: 165 ----KIKILRVLLIEYLKILLLSIQ 185
+ + + EY+ L L I+
Sbjct: 205 LTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|229190360|ref|ZP_04317361.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
gi|228593144|gb|EEK50962.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
Length = 185
Score = 44.5 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + KI +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLFSHPEAKIIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|324326310|gb|ADY21570.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 185
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 143
>gi|297518574|ref|ZP_06936960.1| hypothetical protein EcolOP_13108 [Escherichia coli OP50]
Length = 210
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 40 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 94
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 95 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 144
>gi|284923114|emb|CBG36207.1| conserved hypothetical protein [Escherichia coli 042]
Length = 227
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|206580837|ref|YP_002237434.1| protein SanA [Klebsiella pneumoniae 342]
gi|288934358|ref|YP_003438417.1| hypothetical protein Kvar_1480 [Klebsiella variicola At-22]
gi|290508563|ref|ZP_06547934.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
gi|206569895|gb|ACI11671.1| protein SanA [Klebsiella pneumoniae 342]
gi|288889087|gb|ADC57405.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777957|gb|EFD85954.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
Length = 243
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|110801440|ref|YP_698578.1| hypothetical protein CPR_1256 [Clostridium perfringens SM101]
gi|110681941|gb|ABG85311.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 257
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 27/150 (18%)
Query: 6 YGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
+C+ FI+ G I F + IVVL R+++
Sbjct: 69 ILALICISIFIIVEGAIIFY------PKKSLKPCNYIVVLGAGIRGENLTATLKDRLDKT 122
Query: 54 FELLEN-QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E LE +I +SG S+++ ++K + + + I + KA +T N
Sbjct: 123 IEYLEKTGFNGEIIVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNY 182
Query: 110 ASAWAEKNNFH-----HVLIVTHDYHMPRT 134
+ E + +L+VT D+H R+
Sbjct: 183 SKKIIENLSGKPIKDLDILVVTTDFHAMRS 212
>gi|2196513|gb|AAB61159.1| putative membrane protein [Staphylococcus epidermidis]
Length = 330
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 21/154 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA----IVVLTGE----------P 47
Y + + F F FI + I+VL
Sbjct: 120 AYIFVIHIFIVSLFTYFFSLFISCFILSLFYSRRKIDMSISYIIVLGSGLIEDKVPPLLQ 179
Query: 48 IRIERAFELLENQIGE--KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI+ +++ + K +SG +S+ ++K I Q + E I K+ +
Sbjct: 180 SRIDIGKNFWDSKKDKHTKFLLSGGQGKDERISESQAMKKYLIAQGVNENRIICENKSQS 239
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T N + + + KN ++I +++YH+ R
Sbjct: 240 TYENLKFSKSLISKNA--TIIICSNNYHILRAVF 271
>gi|323968068|gb|EGB63478.1| hypothetical protein ERJG_00588 [Escherichia coli M863]
gi|323977662|gb|EGB72748.1| hypothetical protein ERFG_01184 [Escherichia coli TW10509]
gi|327252382|gb|EGE64041.1| sanA [Escherichia coli STEC_7v]
Length = 239
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPKTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|323443681|gb|EGB01294.1| hypothetical protein SAO46_0340 [Staphylococcus aureus O46]
Length = 322
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG + + + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHKAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|308179164|ref|YP_003918570.1| hypothetical protein AARI_34120 [Arthrobacter arilaitensis Re117]
gi|307746627|emb|CBT77599.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
Re117]
Length = 342
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 25/167 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQM-------HIPDHPSVSAIVVLTGEP--------- 47
W+ + F+ + + + P +A+VVL G
Sbjct: 124 SWWTYALAFFLFMASLFTASLFAMLLLYAWVHGRFPSKADSAAVVVL-GARTIKGKVTPL 182
Query: 48 --IRIERAFELLENQIGEKIFI--SGV--HHSVSKDIL-LQKIPIRQDLAECCIDIGYKA 100
R+++ EL + Q + F+ +G H V + + + K Q + E I I +A
Sbjct: 183 LRGRLDKGIELQQLQHSPRPFMVPTGGQGHDEVEPEGVSMAKYLQEQGIDEAQILIEDRA 242
Query: 101 LNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQ 146
+T N + ++A + + +VT DYH R + +++ +
Sbjct: 243 KDTMENLRFSNALIREQRPDGQLWLVTSDYHALRVAMASRQLGLDAR 289
>gi|296130901|ref|YP_003638151.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
gi|296022716|gb|ADG75952.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
Length = 231
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 7/102 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A +L E + E++ +SG D +R L + A + G
Sbjct: 98 QRRLDAAVDLYERGVVERVLVSGDRSGPDHDE---PGAMRAHLLAAGVPDEAIARDDAG- 153
Query: 107 AQEASAWAEKN---NFHHVLIVTHDYHMPRTFLELQRINSTV 145
++ + + ++VT DYH+ R +
Sbjct: 154 VDTHASCVRAHEEFDVDAAVVVTQDYHLRRALFSCRAAGIDA 195
>gi|229167111|ref|ZP_04294854.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
gi|228616345|gb|EEK73427.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
Length = 166
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L K+ +SG + + ++ + + E I I + NT
Sbjct: 37 QNRLDIALEYLHAHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDCSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 97 YENLKFSMDL---YDVKHAVVVSNTYHLYRT 124
>gi|322514334|ref|ZP_08067386.1| SanA protein [Actinobacillus ureae ATCC 25976]
gi|322119769|gb|EFX91805.1| SanA protein [Actinobacillus ureae ATCC 25976]
Length = 235
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 29/153 (18%)
Query: 5 WYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPS-VSAIVVLT------GEPI-----RI 50
W + + L + +++ I P A+V+ T G P R+
Sbjct: 34 WVSVILTLFVLVIDGATGIYVKDRIYTDIDKLPKYNDAVVLGTSKYYAKGSPNLYYKYRL 93
Query: 51 ERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
E A LL++ + +SG + V ++ L + ++ + + GY+ L++
Sbjct: 94 EAAISLLKHGKVSHLLVSGDNKTPYYNEPKVMQNDLRRMGARKEQIKQD--FAGYRTLDS 151
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A+E +IVT +H R
Sbjct: 152 IVRAREV------YKLEPFVIVTQQFHCERALF 178
>gi|324998494|ref|ZP_08119606.1| hypothetical protein PseP1_06982 [Pseudonocardia sp. P1]
Length = 334
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVLTGE----------PIRIERAF 54
L + ++ F +F+ Y V + P V +VVL R++RA
Sbjct: 127 IALLLLTVYVAFLFCTFLTYAVVYGRLAARPGVDFVVVLGAGLIRGKVTPLLRSRLDRAI 186
Query: 55 ELLENQIG----EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
L E + G + SG V++ + + Q + E + ++ T N
Sbjct: 187 ALRERETGTGNDPVLVTSGGRGPDEPVAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENL 246
Query: 108 QEASAWAEKN--NFHHVLIVTHDYHMPRTFL 136
+ V +VT+++H+ RT L
Sbjct: 247 TFTDRLMADRVPGYRCV-VVTNNFHVFRTAL 276
>gi|306822552|ref|ZP_07455930.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|309801394|ref|ZP_07695521.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
gi|304554097|gb|EFM42006.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|308221909|gb|EFO78194.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
Length = 249
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 24/154 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPSVSAIVVLTGEPI-------- 48
M G+ V LI + ++F V +M P + ++VL
Sbjct: 62 MPRLIRGILVALICIAV--VAFGTVEGCIVSKMSAQGKPGLDYVIVL--GAQVHRARPSR 117
Query: 49 ----RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKAL 101
R+++A E L + +SG S + +AE I K+
Sbjct: 118 VLKFRLDKAIEYLNDNPKTICIVSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSK 177
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
TE N + N V I+T+D+H+ R
Sbjct: 178 TTEENIINSKKLIADEN-ASVGIITNDFHVFRAL 210
>gi|299822466|ref|ZP_07054352.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815995|gb|EFI83233.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 339
Score = 44.1 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ + + F++ + Q + P I+VL R+++
Sbjct: 128 VLGLLIIIAYVTFLLVSFLLSTIIYQYNGPRLNK-DFIIVLGCGLKGKKVPQLLANRLDK 186
Query: 53 AFELLENQIGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
A + Q ++ +SG + +++ +Q I + + + I + + NTE
Sbjct: 187 AIQFHRKQQKKRGRTATFIVSGGKGPNEEIAEARAMQAYLIDKGIPKEQIFMEADSTNTE 246
Query: 105 GNAQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N Q + + NF V VT+++H+ R + ++ Q
Sbjct: 247 ENMQFSKKLMTSIQKNFKSVF-VTNNFHLFRASIYARKAGLDAQ 289
>gi|59712167|ref|YP_204943.1| SanA protein [Vibrio fischeri ES114]
gi|59480268|gb|AAW86055.1| SanA protein [Vibrio fischeri ES114]
Length = 225
Score = 44.1 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + +SG H S ++ +++ ++ + E I + Y T +
Sbjct: 75 RIDAAIELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPEDRITLDYAGFRTLDS 134
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Q A + N + IV+ +H R
Sbjct: 135 VQRAKEIFDAN---SLTIVSQQFHCQRAVF 161
>gi|15672559|ref|NP_266733.1| hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723467|gb|AAK04675.1|AE006291_9 hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
Length = 310
Score = 44.1 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 22/144 (15%)
Query: 20 ISFIRYV----KQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKI 65
F Y+ IP + I++L R+++ E + K
Sbjct: 145 FLFAAYILYSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLKSRLDKGIEYYQKNPTAKF 204
Query: 66 FISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS-----AWAEKN 117
+SG VS+ ++K Q++ I K T N + W++K
Sbjct: 205 VVSGGQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKFTTTYENMLFSKRIINEDWSDKE 264
Query: 118 NFHHVLIVTHDYHMPRTFLELQRI 141
++ T++YH+ R L QR+
Sbjct: 265 MPPSIIFSTNNYHVLRGSLYAQRV 288
>gi|152971124|ref|YP_001336233.1| hypothetical protein KPN_02585 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040162|ref|ZP_06013415.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150955973|gb|ABR78003.1| vancomycin sensitivity [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259042515|gb|EEW43533.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 238
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|332086562|gb|EGI91707.1| hypothetical protein SB521682_3686 [Shigella boydii 5216-82]
Length = 171
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 17 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 76
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 77 VVRAKKVFGENHIT---IISQEFHNQRAI 102
>gi|237808220|ref|YP_002892660.1| hypothetical protein Tola_1459 [Tolumonas auensis DSM 9187]
gi|237500481|gb|ACQ93074.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 251
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 53/170 (31%), Gaps = 30/170 (17%)
Query: 7 GLFVCLIFFIMGF------ISFIRYVKQMHIP--DHPSVSAIVVLTGE------------ 46
L ++ F + R ++Q++ P + +V I+VL
Sbjct: 41 LLVSVATLLLVTFSLRPVSVGLNRPLEQLYPPFPEGQTVDFIIVLGHGHVSDPSVPLNSQ 100
Query: 47 -----PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RI+ A + + SG VS + ++ ++ + +
Sbjct: 101 LTEAASARIQEALRIKRLNPKAHMIFSGSIAGDPVSGAQMYARVAEANGISRNDMTLIEN 160
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
A +TE S + +VT HMPR + + V P
Sbjct: 161 ARDTEEEVALDSQLISNH---PTALVTSASHMPRAMSLFRDTAANVIPAP 207
>gi|283833789|ref|ZP_06353530.1| putative KicA protein [Citrobacter youngae ATCC 29220]
gi|291070454|gb|EFE08563.1| putative KicA protein [Citrobacter youngae ATCC 29220]
Length = 254
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 29/150 (19%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
D V IVVL G R+ L G K+ +G +
Sbjct: 75 DTQKVEYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRANPGSKLIFTGAAAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + + + I + K +TE A F L+VT H+
Sbjct: 135 NVSTAEAGARVAESLGIPRSEIITLD-KPKDTEEEAAAVKHAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENS 161
PR + Q+ P P ++ L +S
Sbjct: 191 PRAMIFFQQAG----LHPLPAPANQLAIDS 216
>gi|184155411|ref|YP_001843751.1| hypothetical protein LAF_0935 [Lactobacillus fermentum IFO 3956]
gi|183226755|dbj|BAG27271.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|299783224|gb|ADJ41222.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 308
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L + ++ +SG + + + + ++ + E I + + NT
Sbjct: 166 RLLGGLALYQRFPKAELIMSGGQGDDEPEPEAVAMHRFARQKGVPESAIRLETNSTNTAT 225
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N EA + N+ V++VT DYH+ R+ L +R
Sbjct: 226 NLSEAKRFI--NSGDRVVLVTSDYHLLRSLLYARR 258
>gi|206973669|ref|ZP_03234587.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217959789|ref|YP_002338341.1| hypothetical protein BCAH187_A2388 [Bacillus cereus AH187]
gi|206747825|gb|EDZ59214.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217068109|gb|ACJ82359.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 185
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDERRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 143
>gi|75906523|ref|YP_320819.1| hypothetical protein Ava_0298 [Anabaena variabilis ATCC 29413]
gi|75700248|gb|ABA19924.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 232
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 13/139 (9%)
Query: 1 MRYFWYGL--FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
+R W + V ++ ++G I + A VL G IR E +
Sbjct: 17 IRKKWRLIQKLVGVLCLVLGG-WLIITTITLVFASSQPPDAFFVL-GGSIRREIYIAQIA 74
Query: 59 NQIGEK-IFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
Q + I IS + + + E C A +T N +
Sbjct: 75 KQYPQIPILISQGSPDPCIKLIFEREAADLSNVWLEKC------ANSTFENFYYGVPILK 128
Query: 116 KNNFHHVLIVTHDYHMPRT 134
H V ++T H+PR
Sbjct: 129 SWGVHKVRLITSPTHLPRA 147
>gi|332701660|ref|ZP_08421748.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
gi|332551809|gb|EGJ48853.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
Length = 263
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 27/158 (17%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA-----ECCIDIG 97
LT R+ EL K+ +SG + + L + R LA + +
Sbjct: 101 LTAAADRLVAFVELARRYPHAKLVVSGGSGMLLRQDLKESDVTRAALACLGFDDSRVIYE 160
Query: 98 YKALNTEGNAQEASA-----WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ T NA + W L+VT HMPR + + +PYP+
Sbjct: 161 EISRTTHENAMVSRPSQDGLW---------LLVTSASHMPRAVGVFRA--QDWRVLPYPV 209
Query: 153 ISHDLEENSSIFKIKILRVL------LIEYLKILLLSI 184
+ F + + L + E++ +++ +
Sbjct: 210 DYRTVAGMVWEFPFQTGQRLALVSAAMREWVGLVVYRL 247
>gi|229138983|ref|ZP_04267560.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
gi|228644338|gb|EEL00593.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
Length = 162
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDERRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 93 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 120
>gi|197336672|ref|YP_002157666.1| transporter [Vibrio fischeri MJ11]
gi|197313924|gb|ACH63373.1| transporter [Vibrio fischeri MJ11]
Length = 364
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ ++ + I ++G K L+ ++ + I A +T
Sbjct: 213 DRLNATLDMAKKNPNSYIVVTGGVPKNHKTEGKLMADWLVKNGIDASRIIEDNYARSTVE 272
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S ++N H I++ H+ R E+
Sbjct: 273 NALYSSYALARHNIDHATIISSASHVRRGQALFEVA 308
>gi|126433493|ref|YP_001069184.1| hypothetical protein Mjls_0884 [Mycobacterium sp. JLS]
gi|126233293|gb|ABN96693.1| protein of unknown function DUF218 [Mycobacterium sp. JLS]
Length = 193
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + + I ++G + VS+ ++++ + + I + +A +T N
Sbjct: 65 RVITGLTVAQFFPQSPIIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDRANSTVQN 124
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFK 165
A+ + AEK +++VT H R + + + YP S +
Sbjct: 125 ARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAGANLLATVSYPDGSPQVNAAQFARD 184
>gi|312972649|ref|ZP_07786822.1| sanA [Escherichia coli 1827-70]
gi|310332591|gb|EFP99804.1| sanA [Escherichia coli 1827-70]
Length = 207
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I +D+ I Y +T +
Sbjct: 53 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVIFCDYAGFSTLDS 112
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 113 VVRAKKVFGENHIT---IISQEFHNQRAI 138
>gi|268590146|ref|ZP_06124367.1| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291314421|gb|EFE54874.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 275
Score = 44.1 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 26/137 (18%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHS--VSKDILL 80
IVVL G R+ L G K+ +G S +S +
Sbjct: 88 IVVLGGGFTYNPDWSPSSNLLNNSLPRVTEGVRLYLKHPGSKLIFTGGKASSPISSAEVA 147
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + +T+ A E K+ F L+VT H+PR +
Sbjct: 148 AQVAQSLGVPAQDTIPLTEPKDTQEEAYEVEKIIGKSPF---LLVTSANHLPRAMTMFTQ 204
Query: 141 INSTVQFIPYPIISHDL 157
P+P ++ L
Sbjct: 205 RGMN----PFPAPANQL 217
>gi|307154002|ref|YP_003889386.1| hypothetical protein Cyan7822_4193 [Cyanothece sp. PCC 7822]
gi|306984230|gb|ADN16111.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
Length = 227
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 71/197 (36%), Gaps = 22/197 (11%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG--EPIRIERAFELLENQIGEK 64
G + ++ ++FIR ++ + P + +VL G I ++ A E + ++
Sbjct: 30 GWIILFALILISGLTFIRTIQPFLAMNAPVKADTLVLEGWVGDIVVQAALEEFKQGNYQR 89
Query: 65 IFISGVH--------HSVSKDILLQKIPIRQDLAECCID---IGYKALN-TEGNAQEASA 112
I +G + + + I + E I N T +A+
Sbjct: 90 IITTGTNLLQGSFLSQYQNYAQMTASTLIALGIPENKIVPIVTPNVIRNRTAASAETVRD 149
Query: 113 WAEKNN--FHHVLIVTHDYHMPRTFLELQRI-NSTVQF--IPYPIISHDLEENSSIFKIK 167
W ++N + I ++D H R++ +++ ++ I YP +
Sbjct: 150 WISQSNVKIQAMNIYSYDVHTRRSWYLFKKVLPPDIKIGAIAYP---GEYNPQIWWTSSA 206
Query: 168 ILRVLLIEYLKILLLSI 184
++ +L E + L I
Sbjct: 207 GVKSVLSEAISYLYTRI 223
>gi|332086610|gb|EGI91752.1| hypothetical protein SD15574_3629 [Shigella dysenteriae 155-74]
Length = 203
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ + + ++H R
Sbjct: 109 VVRAKKVFGENHITTI---SQEFHNQRAI 134
>gi|161502667|ref|YP_001569779.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864014|gb|ABX20637.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 239
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|157961268|ref|YP_001501302.1| hypothetical protein Spea_1442 [Shewanella pealeana ATCC 700345]
gi|157846268|gb|ABV86767.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 256
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 27/151 (17%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK--------- 99
R+ L K+ +SG +S + + +++G
Sbjct: 105 RLTEGVRQLSLGQNCKLVVSGWSGGLSTRSHADVM------FDAAVELGVSPKAIIKLPL 158
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
A +T AQ E F +VT HMPR V P + +
Sbjct: 159 AQDTIEEAQFMKWEVEDAPFR---LVTSASHMPRAMAIFTNAKLNVVAAP----TDFAQR 211
Query: 160 NSSIFKIKILRVL-----LIEYLKILLLSIQ 185
S ++ +L + EYL +L ++
Sbjct: 212 ASYWWRFDAQSLLSSQRAIHEYLGLLWFKLK 242
>gi|16765514|ref|NP_461129.1| hypothetical protein STM2184 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56412902|ref|YP_149977.1| hypothetical protein SPA0667 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613124|ref|YP_001587089.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551140|ref|ZP_02344895.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991111|ref|ZP_02572210.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168229539|ref|ZP_02654597.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168236353|ref|ZP_02661411.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168242270|ref|ZP_02667202.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259475|ref|ZP_02681448.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466136|ref|ZP_02700006.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168818106|ref|ZP_02830106.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444390|ref|YP_002041455.1| hypothetical protein SNSL254_A2374 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451491|ref|YP_002046237.1| hypothetical protein SeHA_C2419 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471005|ref|ZP_03076989.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737817|ref|YP_002115273.1| hypothetical protein SeSA_A2423 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250828|ref|YP_002147155.1| hypothetical protein SeAg_B2330 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262385|ref|ZP_03162459.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197361833|ref|YP_002141469.1| hypothetical protein SSPA0626 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245373|ref|YP_002216268.1| hypothetical protein SeD_A2531 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200388117|ref|ZP_03214729.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204929219|ref|ZP_03220362.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353319|ref|YP_002227120.1| hypothetical protein SG2220 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857618|ref|YP_002244269.1| hypothetical protein SEN2177 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583315|ref|YP_002637113.1| hypothetical protein SPC_1518 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912626|ref|ZP_04656463.1| hypothetical protein SentesTe_16047 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16420721|gb|AAL21088.1| vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56127159|gb|AAV76665.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161362488|gb|ABX66256.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403053|gb|ACF63275.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194409795|gb|ACF70014.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457369|gb|EDX46208.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713319|gb|ACF92540.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195631432|gb|EDX49992.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197093309|emb|CAR58757.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214531|gb|ACH51928.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197240640|gb|EDY23260.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197290569|gb|EDY29924.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939889|gb|ACH77222.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605215|gb|EDZ03760.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204321763|gb|EDZ06962.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273100|emb|CAR38055.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324029|gb|EDZ11868.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330585|gb|EDZ17349.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335954|gb|EDZ22718.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205338626|gb|EDZ25390.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344953|gb|EDZ31717.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350832|gb|EDZ37463.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709421|emb|CAR33762.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467842|gb|ACN45672.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247398|emb|CBG25223.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994249|gb|ACY89134.1| hypothetical protein STM14_2691 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158745|emb|CBW18257.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913174|dbj|BAJ37148.1| hypothetical protein STMDT12_C22050 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086623|emb|CBY96394.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321224838|gb|EFX49901.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615211|gb|EFY12133.1| hypothetical protein SEEM315_00395 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617802|gb|EFY14698.1| hypothetical protein SEEM971_13850 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624604|gb|EFY21435.1| hypothetical protein SEEM973_15164 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626945|gb|EFY23741.1| hypothetical protein SEEM974_10815 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634131|gb|EFY30867.1| hypothetical protein SEEM201_06316 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635678|gb|EFY32388.1| hypothetical protein SEEM202_16634 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640187|gb|EFY36851.1| hypothetical protein SEEM954_05092 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646390|gb|EFY42902.1| hypothetical protein SEEM054_09695 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322656478|gb|EFY52767.1| hypothetical protein SEEM965_08487 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661454|gb|EFY57678.1| hypothetical protein SEEM19N_04684 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665658|gb|EFY61842.1| hypothetical protein SEEM801_13855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667182|gb|EFY63349.1| hypothetical protein SEEM507_08975 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671188|gb|EFY67316.1| hypothetical protein SEEM877_07642 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675172|gb|EFY71249.1| hypothetical protein SEEM867_05427 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680780|gb|EFY76815.1| hypothetical protein SEEM180_14727 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686955|gb|EFY82932.1| hypothetical protein SEEM600_00620 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323130511|gb|ADX17941.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192719|gb|EFZ77946.1| hypothetical protein SEEM581_11841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198849|gb|EFZ83948.1| hypothetical protein SEEM501_02045 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205141|gb|EFZ90119.1| hypothetical protein SEEM460_14111 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208184|gb|EFZ93128.1| hypothetical protein SEEM020_21612 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213532|gb|EFZ98323.1| hypothetical protein SEEM6152_03680 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215791|gb|EGA00534.1| hypothetical protein SEEM0077_09617 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221290|gb|EGA05713.1| hypothetical protein SEEM0047_01257 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223844|gb|EGA08147.1| hypothetical protein SEEM0055_05621 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231237|gb|EGA15352.1| hypothetical protein SEEM0052_15697 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233671|gb|EGA17763.1| hypothetical protein SEEM3312_00927 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237741|gb|EGA21801.1| hypothetical protein SEEM5258_18220 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245724|gb|EGA29718.1| hypothetical protein SEEM1156_11185 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246538|gb|EGA30517.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253017|gb|EGA36850.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254775|gb|EGA38578.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259525|gb|EGA43160.1| hypothetical protein SEEM8284_19170 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268308|gb|EGA51783.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271903|gb|EGA55319.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326624019|gb|EGE30364.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|326628408|gb|EGE34751.1| Vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989118|gb|AEF08101.1| hypothetical protein STMUK_2214 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 239
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|301021896|ref|ZP_07185857.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397812|gb|EFJ81350.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 191
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 37 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 96
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 97 VVRAKKVFGENHIT---IISQEFHNQRAI 122
>gi|256390075|ref|YP_003111639.1| hypothetical protein Caci_0865 [Catenulispora acidiphila DSM 44928]
gi|256356301|gb|ACU69798.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 350
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 36/159 (22%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAF 54
Y F+ + GF+ +P +V+L R+ER
Sbjct: 143 YLAFLFFCYLSYGFLY-------RRMPIRRVPDFVVILGAGLMGGRRVSPLLASRLERGR 195
Query: 55 ELLEN-----------QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
+ E+ Q + +SG +S+ ++ + I ++
Sbjct: 196 AVYESLSALAQNSGDTQRVPMLIVSGGKGSDERLSEAEAMENYLVEAGFPADRILKEDQS 255
Query: 101 LNTEGNAQEASAWAEKN---NFHHVLIVTHDYHMPRTFL 136
TE N ++A +N + V +VT+D+H R L
Sbjct: 256 STTEENLLYSAALMRENRPEGYRCV-VVTNDFHSYRAAL 293
>gi|253730030|ref|ZP_04864195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726243|gb|EES94972.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 171
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 47 PIRIERAFELLENQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R++RA ++ + Q KI +SG +S+ + +Q+ I + + I + ++N
Sbjct: 16 AARLDRALDIYQQQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSIN 75
Query: 103 TEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHD 156
T N + + ++ VT +H+ R Q++ ++ + PY H
Sbjct: 76 TYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHV 135
Query: 157 LEENSSIFKIKILRVLLIEYL 177
L ++ + + R+LL Y
Sbjct: 136 LIKD-YLGVMYQYRLLLTLYC 155
>gi|239931421|ref|ZP_04688374.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 208
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 49/169 (28%), Gaps = 20/169 (11%)
Query: 8 LFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL 56
+ C++ + ++ + D P VV R++ A EL
Sbjct: 1 MAACVLALLPATWLHLAADGRLRTTADVPRTEVAVVFGAGLWDGEPSPYLARRLDAAVEL 60
Query: 57 LENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
E + ++G + + ++ R + + I Y +T + A
Sbjct: 61 YRAGRIEVVLVTGDNSREEYDEPDAMRAYLTRHGVPDARIVSDYAGFDTWDSCVRAK--- 117
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ ++++ +H+ R Y + D +
Sbjct: 118 KVFGVDRAVLISQGFHIRRAVALCGAAG----VSSYGVGVDDRHDLVWY 162
>gi|187732733|ref|YP_001879527.1| hypothetical protein SbBS512_E0827 [Shigella boydii CDC 3083-94]
gi|187429725|gb|ACD08999.1| protein SanA [Shigella boydii CDC 3083-94]
Length = 239
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVAPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|162449130|ref|YP_001611497.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
gi|161159712|emb|CAN91017.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
Length = 185
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 41/144 (28%), Gaps = 23/144 (15%)
Query: 62 GEKIFISG-------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ SG V V L + + I +L T NA ++A
Sbjct: 45 APWVIASGGRRWGAQVEARVLAAELRRA-----GVPAHAILQDLWSLTTHENAIFSAALL 99
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS---------IFK 165
+ IVT +HM R + +P + + +
Sbjct: 100 RRVGARRAAIVTCSWHMARALQNFHDVGIDACGLPASRVGEPVVARAWQRGHEVISMWLD 159
Query: 166 IKIL--RVLLIEYLKILLLSIQLS 187
+ + R +L E LL + +
Sbjct: 160 ARAMRRRRILSESAAWLLDTARQG 183
>gi|222095875|ref|YP_002529932.1| cytoplasmic protein [Bacillus cereus Q1]
gi|221239933|gb|ACM12643.1| hypothetical Cytosolic Protein [Bacillus cereus Q1]
Length = 185
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + + H ++V++ YH+ RT
Sbjct: 116 YENVKFS---IDLYDVKHAVVVSNTYHLYRT 143
>gi|315172207|gb|EFU16224.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 344
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKNRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKKPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|254382897|ref|ZP_04998253.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194341798|gb|EDX22764.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 235
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 48/169 (28%), Gaps = 21/169 (12%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL 56
G + L+ + ++ PS VV R++ A EL
Sbjct: 34 GCVLALLPSAWTHVVAADRLR--TTAGAPSAEVAVVFGAGLWNGRPTPYLANRLDAAAEL 91
Query: 57 LENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ + +SG + + ++ + I + +T + A
Sbjct: 92 YRAGKVKVVLVSGDNSRTGYDEPDAMRTYLTAHGVPGERIVSDFAGFDTWDSCVRAKEIF 151
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
H ++++ +H+ R + Y + D + +
Sbjct: 152 ---GVHRAVLISQGFHIHRAVALCEAAGVD----SYGVGVTDAHDATWY 193
>gi|301024366|ref|ZP_07188055.1| protein SanA [Escherichia coli MS 196-1]
gi|299880463|gb|EFI88674.1| protein SanA [Escherichia coli MS 196-1]
Length = 235
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 65 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 119
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 120 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 169
>gi|307277969|ref|ZP_07559053.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
gi|306505366|gb|EFM74552.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
Length = 344
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|307289203|ref|ZP_07569159.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|306499912|gb|EFM69273.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|315164112|gb|EFU08129.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
Length = 343
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 159 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 218
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 219 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 278
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 279 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 324
>gi|291517930|emb|CBK73151.1| Uncharacterized conserved protein [Butyrivibrio fibrisolvens 16/4]
Length = 245
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A E L N K+ ++G + S+S+ Q+ + Q + + I + +++T+
Sbjct: 117 RLDSAVEYLNNNPDTKVIVTGGQGANESISEGEGGQEYLLSQGINKDRILVEKDSVDTDE 176
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N A + + +N + IVT+++H+ R +
Sbjct: 177 NISNALSLIDTDNDMKICIVTNNFHVFRGVM 207
>gi|238920331|ref|YP_002933846.1| hypothetical protein NT01EI_2441 [Edwardsiella ictaluri 93-146]
gi|238869900|gb|ACR69611.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 276
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 52/190 (27%), Gaps = 32/190 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W G+ + + + + + + +VVL G
Sbjct: 56 LAWLGILLLSMQPLADRLLAPLENRYPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGN 115
Query: 49 ---RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L ++ +G + S ++ Q + I +
Sbjct: 116 SLPRVTEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSLGVDEQRIIVLDSP-R 174
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-----IISHD 156
+T QEA A A +++VT HMPR + IP P I S
Sbjct: 175 DT---GQEARAVAGVVGNAPLILVTSANHMPRALGFFHH--QGLDPIPAPANQLAIASPL 229
Query: 157 LEENSSIFKI 166
+
Sbjct: 230 NPWERWLPSP 239
>gi|157162562|ref|YP_001459880.1| putative SanA protein [Escherichia coli HS]
gi|157068242|gb|ABV07497.1| putative SanA protein [Escherichia coli HS]
gi|323941817|gb|EGB37996.1| hypothetical protein ERDG_01592 [Escherichia coli E482]
Length = 227
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I +D+ I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKDVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|148652582|ref|YP_001279675.1| hypothetical protein PsycPRwf_0773 [Psychrobacter sp. PRwf-1]
gi|148571666|gb|ABQ93725.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 300
Score = 44.1 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 16/99 (16%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++NT NA+ + ++ N V ++T YHM RT + + + P I
Sbjct: 188 ENASMNTCENARFTA---KRLNLSDVYLITDAYHMTRTRRQF--ALNNIHTSP---IVAP 239
Query: 157 LEENSSIFKIKI----LRVLLIEYLKILLLSIQLSLSTQ 191
L S K R L E L + + Q
Sbjct: 240 LPMQKSWLHPKDNAQHSRRTLYE----LAAYARDVFAPQ 274
>gi|315168937|gb|EFU12954.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 344
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|258455282|ref|ZP_05703242.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|257862493|gb|EEV85261.1| conserved hypothetical protein [Staphylococcus aureus A5937]
Length = 322
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG +S+ + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPISEVLAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|257416189|ref|ZP_05593183.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257422515|ref|ZP_05599505.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257158017|gb|EEU87977.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257164339|gb|EEU94299.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 337
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|254389035|ref|ZP_05004265.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294812508|ref|ZP_06771151.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197702752|gb|EDY48564.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294325107|gb|EFG06750.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 234
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 21/157 (13%)
Query: 2 RYFWYG-LFVCLIFFIMGFISFIRYVKQMHI---PDHPSVSAIVVLTGE----------P 47
R+ G +FVC++ + V H+ D P+ +V
Sbjct: 24 RWLVRGAMFVCVLALLPATW--THRVADRHVHAAEDVPAQDVALVFGAGLWQGRPTPYLA 81
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A +L + I ++G + + ++ + + + E I + ++
Sbjct: 82 HRLDTAADLYRRGKVKVILVTGDNSREEYDEPDAMRTYLVGRGVPERRIVSDHAGFDSWD 141
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A ++V+ +H+ R +
Sbjct: 142 SCVRAKEIF---GVDRAVLVSQGFHIRRAVALCRTAG 175
>gi|29376218|ref|NP_815372.1| hypothetical protein EF1664 [Enterococcus faecalis V583]
gi|227518851|ref|ZP_03948900.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553467|ref|ZP_03983516.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545724|ref|ZP_04434449.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229549915|ref|ZP_04438640.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293382896|ref|ZP_06628814.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293389615|ref|ZP_06634072.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300860845|ref|ZP_07106932.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307274861|ref|ZP_07556024.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|307291900|ref|ZP_07571769.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|312899511|ref|ZP_07758841.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907633|ref|ZP_07766624.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910250|ref|ZP_07769097.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312951594|ref|ZP_07770490.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|29343681|gb|AAO81442.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227073700|gb|EEI11663.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177402|gb|EEI58374.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304988|gb|EEN70984.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229309174|gb|EEN75161.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079561|gb|EFE16925.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291081232|gb|EFE18195.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300849884|gb|EFK77634.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306496898|gb|EFM66446.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|306508309|gb|EFM77416.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|310626661|gb|EFQ09944.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310630560|gb|EFQ13843.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289523|gb|EFQ68079.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311293381|gb|EFQ71937.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027821|gb|EFT39753.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315029286|gb|EFT41218.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
gi|315034068|gb|EFT46000.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315147360|gb|EFT91376.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315152384|gb|EFT96400.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158173|gb|EFU02190.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315575767|gb|EFU87958.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315580419|gb|EFU92610.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327535229|gb|AEA94063.1| hypothetical protein OG1RF_11376 [Enterococcus faecalis OG1RF]
Length = 344
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|194427136|ref|ZP_03059687.1| protein SanA [Escherichia coli B171]
gi|194414757|gb|EDX31028.1| protein SanA [Escherichia coli B171]
gi|323161771|gb|EFZ47652.1| sanA [Escherichia coli E128010]
Length = 239
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|329999121|ref|ZP_08303325.1| protein SanA [Klebsiella sp. MS 92-3]
gi|328538451|gb|EGF64569.1| protein SanA [Klebsiella sp. MS 92-3]
Length = 232
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|323178792|gb|EFZ64368.1| sanA [Escherichia coli 1180]
Length = 191
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 37 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 96
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 97 VVRAKKVFGENHIT---IISQEFHNQRAI 122
>gi|315145143|gb|EFT89159.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315162313|gb|EFU06330.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 344
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|187934001|ref|YP_001887179.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
gi|187722154|gb|ACD23375.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
Length = 348
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PI 48
++ G+ L++++ +F I ++ Q + P I+VL
Sbjct: 127 VKVLLGGINFVLLYYLFDVFNFLMISFLYQFNKPKLCQ-DFIIVLGSGLIGERVPPLLAS 185
Query: 49 RIERAFELLENQIG----EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI++A E Q KI SG +S+ + +Q+ +++ + + K++
Sbjct: 186 RIDKAIEFYNKQGAVTNPPKIIFSGGQGSDEKISEALAMQRYAVQKGIPIENTILEDKSV 245
Query: 102 NTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRIN 142
NT N + + + N H + VT+++H+ R + ++
Sbjct: 246 NTLQNMMFSKKIMDNSTPNTHTSIFVTNNFHLFRAGIFARKAG 288
>gi|315155656|gb|EFT99672.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 344
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|307687370|ref|ZP_07629816.1| hypothetical protein Ccel74_04393 [Clostridium cellulovorans 743B]
Length = 254
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHI----PDHPSVSAIVVLTGE--PIRIERAFEL----- 56
L + F I+GF F+ ++ D+ +VVL RI + +L
Sbjct: 69 LIIFTSFLIIGFSFFLVTEAFIYKTGSEKDNTPTDYVVVLGAGLIGDRISTSLQLRLDAA 128
Query: 57 LENQIGEK---IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
LE I +SG +S+ ++ I + + I + K+ +T N +
Sbjct: 129 LEFHSIHPEIPIIVSGGQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFS 188
Query: 111 SAWAEKNNFHH---VLIVTHDYHMPRT 134
V ++T+++H R
Sbjct: 189 KELISNKCSKTPIKVTVITNNFHQFRA 215
>gi|302876695|ref|YP_003845328.1| hypothetical protein Clocel_3898 [Clostridium cellulovorans 743B]
gi|302579552|gb|ADL53564.1| protein of unknown function DUF218 [Clostridium cellulovorans 743B]
Length = 257
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHI----PDHPSVSAIVVLTGE--PIRIERAFEL----- 56
L + F I+GF F+ ++ D+ +VVL RI + +L
Sbjct: 69 LIIFTSFLIIGFSFFLVTEAFIYKTGSEKDNTPTDYVVVLGAGLIGDRISTSLQLRLDAA 128
Query: 57 LENQIGEK---IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
LE I +SG +S+ ++ I + + I + K+ +T N +
Sbjct: 129 LEFHSIHPEIPIIVSGGQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFS 188
Query: 111 SAWAEKNNFHH---VLIVTHDYHMPRT 134
V ++T+++H R
Sbjct: 189 KELISNKCSKTPIKVTVITNNFHQFRA 215
>gi|56413961|ref|YP_151036.1| hypothetical protein SPA1808 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362884|ref|YP_002142521.1| hypothetical protein SSPA1681 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128218|gb|AAV77724.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094361|emb|CAR59873.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 258
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 44/149 (29%), Gaps = 23/149 (15%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---HHSVSKDIL 79
IVVL G R+ L G K+ +G ++VS +
Sbjct: 82 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGAKLIFTGGVAKTNTVSTAEV 141
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ + I K +TE A F L+VT H+PR + Q
Sbjct: 142 SARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMIFFQ 198
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKI 168
P ++ D N I
Sbjct: 199 HAGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|18309791|ref|NP_561725.1| hypothetical protein CPE0809 [Clostridium perfringens str. 13]
gi|18144469|dbj|BAB80515.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 206
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + LE K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLELHPNTKVIVSGEQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNFHH--VLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHADKDEVLIVTSDFHLFRA 156
>gi|257082455|ref|ZP_05576816.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256990485|gb|EEU77787.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
Length = 337
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMSSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|239944530|ref|ZP_04696467.1| hypothetical protein SrosN15_26272 [Streptomyces roseosporus NRRL
15998]
gi|239990990|ref|ZP_04711654.1| hypothetical protein SrosN1_27034 [Streptomyces roseosporus NRRL
11379]
gi|291447993|ref|ZP_06587383.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350940|gb|EFE77844.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 23/155 (14%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA-- 53
GL V F + F+ + ++ + +VVL R++R
Sbjct: 130 GLAVYFSFLFLCFVCYAFLYGRLRV--RRKADFVVVLGSGLVGGSTVPPLLASRLKRGQA 187
Query: 54 --FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L + SG + + + + Q I+ ++ NTE N +
Sbjct: 188 VHARLARRGGSPVLITSGGQGPDEDLPESHAMADHLVAQGFPAHLIEREDRSTNTEENLR 247
Query: 109 EASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRI 141
+ A EK ++ V +VT++YH R L +R+
Sbjct: 248 FSKAIMEKAKPDYRCV-VVTNNYHAFRAALTARRV 281
>gi|30063588|ref|NP_837759.1| hypothetical protein S2358 [Shigella flexneri 2a str. 2457T]
gi|30041841|gb|AAP17568.1| vancomycin resistance protein [Shigella flexneri 2a str. 2457T]
gi|313651250|gb|EFS15648.1| sanA [Shigella flexneri 2a str. 2457T]
Length = 239
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|311278872|ref|YP_003941103.1| hypothetical protein Entcl_1558 [Enterobacter cloacae SCF1]
gi|308748067|gb|ADO47819.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 244
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|255972698|ref|ZP_05423284.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256619159|ref|ZP_05476005.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256762595|ref|ZP_05503175.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256853221|ref|ZP_05558591.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256961832|ref|ZP_05566003.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256965029|ref|ZP_05569200.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257086952|ref|ZP_05581313.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|255963716|gb|EET96192.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256598686|gb|EEU17862.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256683846|gb|EEU23541.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256711680|gb|EEU26718.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256952328|gb|EEU68960.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256955525|gb|EEU72157.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256994982|gb|EEU82284.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 337
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|15802700|ref|NP_288727.1| hypothetical protein Z3399 [Escherichia coli O157:H7 EDL933]
gi|15832290|ref|NP_311063.1| hypothetical protein ECs3036 [Escherichia coli O157:H7 str. Sakai]
gi|16130082|ref|NP_416649.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|26248525|ref|NP_754565.1| hypothetical protein c2677 [Escherichia coli CFT073]
gi|56480052|ref|NP_708044.2| hypothetical protein SF2229 [Shigella flexneri 2a str. 301]
gi|82543535|ref|YP_407482.1| hypothetical protein SBO_0997 [Shigella boydii Sb227]
gi|82777373|ref|YP_403722.1| hypothetical protein SDY_2143 [Shigella dysenteriae Sd197]
gi|89108961|ref|AP_002741.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|91211430|ref|YP_541416.1| hypothetical protein UTI89_C2417 [Escherichia coli UTI89]
gi|110642353|ref|YP_670083.1| hypothetical protein ECP_2183 [Escherichia coli 536]
gi|110806121|ref|YP_689641.1| hypothetical protein SFV_2219 [Shigella flexneri 5 str. 8401]
gi|117624346|ref|YP_853259.1| hypothetical protein APECO1_4406 [Escherichia coli APEC O1]
gi|157156428|ref|YP_001463495.1| hypothetical protein EcE24377A_2439 [Escherichia coli E24377A]
gi|157161624|ref|YP_001458942.1| hypothetical protein EcHS_A2278 [Escherichia coli HS]
gi|168750524|ref|ZP_02775546.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|168757726|ref|ZP_02782733.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|168763800|ref|ZP_02788807.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|168767757|ref|ZP_02792764.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|168773145|ref|ZP_02798152.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|168779987|ref|ZP_02804994.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|168788954|ref|ZP_02813961.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|168801167|ref|ZP_02826174.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|170019539|ref|YP_001724493.1| hypothetical protein EcolC_1504 [Escherichia coli ATCC 8739]
gi|170081767|ref|YP_001731087.1| hypothetical protein ECDH10B_2301 [Escherichia coli str. K-12
substr. DH10B]
gi|170683493|ref|YP_001744338.1| hypothetical protein EcSMS35_2291 [Escherichia coli SMS-3-5]
gi|188493447|ref|ZP_03000717.1| sanA protein [Escherichia coli 53638]
gi|191165351|ref|ZP_03027193.1| protein SanA [Escherichia coli B7A]
gi|191170117|ref|ZP_03031671.1| protein SanA [Escherichia coli F11]
gi|193062236|ref|ZP_03043331.1| protein SanA [Escherichia coli E22]
gi|193071089|ref|ZP_03052015.1| protein SanA [Escherichia coli E110019]
gi|194436045|ref|ZP_03068147.1| protein SanA [Escherichia coli 101-1]
gi|195935520|ref|ZP_03080902.1| hypothetical protein EscherichcoliO157_03527 [Escherichia coli
O157:H7 str. EC4024]
gi|208809602|ref|ZP_03251939.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208812329|ref|ZP_03253658.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208821654|ref|ZP_03261974.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209395911|ref|YP_002271553.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209919602|ref|YP_002293686.1| hypothetical protein ECSE_2411 [Escherichia coli SE11]
gi|215487365|ref|YP_002329796.1| hypothetical protein E2348C_2290 [Escherichia coli O127:H6 str.
E2348/69]
gi|217327663|ref|ZP_03443746.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218559062|ref|YP_002391975.1| hypothetical protein ECS88_2290 [Escherichia coli S88]
gi|218690293|ref|YP_002398505.1| hypothetical protein ECED1_2591 [Escherichia coli ED1a]
gi|218695755|ref|YP_002403422.1| hypothetical protein EC55989_2394 [Escherichia coli 55989]
gi|218700616|ref|YP_002408245.1| hypothetical protein ECIAI39_2283 [Escherichia coli IAI39]
gi|218705672|ref|YP_002413191.1| hypothetical protein ECUMN_2477 [Escherichia coli UMN026]
gi|227887199|ref|ZP_04005004.1| membrane protein [Escherichia coli 83972]
gi|237704609|ref|ZP_04535090.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|238901326|ref|YP_002927122.1| hypothetical protein BWG_1926 [Escherichia coli BW2952]
gi|253772929|ref|YP_003035760.1| hypothetical protein ECBD_1514 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162158|ref|YP_003045266.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|254794043|ref|YP_003078880.1| hypothetical protein ECSP_3022 [Escherichia coli O157:H7 str.
TW14359]
gi|256017688|ref|ZP_05431553.1| hypothetical protein ShiD9_02145 [Shigella sp. D9]
gi|256022172|ref|ZP_05436037.1| hypothetical protein E4_02262 [Escherichia sp. 4_1_40B]
gi|260844750|ref|YP_003222528.1| hypothetical protein ECO103_2619 [Escherichia coli O103:H2 str.
12009]
gi|260856117|ref|YP_003230008.1| hypothetical protein ECO26_3056 [Escherichia coli O26:H11 str.
11368]
gi|260868846|ref|YP_003235248.1| hypothetical protein ECO111_2861 [Escherichia coli O111:H- str.
11128]
gi|261223397|ref|ZP_05937678.1| hypothetical protein EscherichiacoliO157_02144 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259053|ref|ZP_05951586.1| hypothetical protein EscherichiacoliO157EcO_25092 [Escherichia coli
O157:H7 str. FRIK966]
gi|291283398|ref|YP_003500216.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|293405612|ref|ZP_06649604.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|293410503|ref|ZP_06654079.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|293415427|ref|ZP_06658070.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|293446494|ref|ZP_06662916.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|298381293|ref|ZP_06990892.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300822589|ref|ZP_07102727.1| protein SanA [Escherichia coli MS 119-7]
gi|300897800|ref|ZP_07116193.1| protein SanA [Escherichia coli MS 198-1]
gi|300902207|ref|ZP_07120207.1| protein SanA [Escherichia coli MS 84-1]
gi|300918784|ref|ZP_07135353.1| protein SanA [Escherichia coli MS 115-1]
gi|300926246|ref|ZP_07142049.1| protein SanA [Escherichia coli MS 182-1]
gi|300930373|ref|ZP_07145782.1| protein SanA [Escherichia coli MS 187-1]
gi|300935066|ref|ZP_07150097.1| protein SanA [Escherichia coli MS 21-1]
gi|300950097|ref|ZP_07164044.1| protein SanA [Escherichia coli MS 116-1]
gi|300955834|ref|ZP_07168175.1| protein SanA [Escherichia coli MS 175-1]
gi|300981481|ref|ZP_07175562.1| protein SanA [Escherichia coli MS 200-1]
gi|300982858|ref|ZP_07176322.1| protein SanA [Escherichia coli MS 45-1]
gi|301021091|ref|ZP_07185132.1| protein SanA [Escherichia coli MS 69-1]
gi|301048880|ref|ZP_07195873.1| protein SanA [Escherichia coli MS 185-1]
gi|301306538|ref|ZP_07212602.1| protein SanA [Escherichia coli MS 124-1]
gi|301328623|ref|ZP_07221684.1| protein SanA [Escherichia coli MS 78-1]
gi|301644161|ref|ZP_07244169.1| protein SanA [Escherichia coli MS 146-1]
gi|306814741|ref|ZP_07448903.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|307138803|ref|ZP_07498159.1| hypothetical protein EcolH7_11856 [Escherichia coli H736]
gi|307311277|ref|ZP_07590921.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309788027|ref|ZP_07682636.1| sanA [Shigella dysenteriae 1617]
gi|309793022|ref|ZP_07687450.1| protein SanA [Escherichia coli MS 145-7]
gi|312967437|ref|ZP_07781652.1| sanA [Escherichia coli 2362-75]
gi|312973607|ref|ZP_07787779.1| sanA [Escherichia coli 1827-70]
gi|331642769|ref|ZP_08343904.1| protein SanA [Escherichia coli H736]
gi|331647795|ref|ZP_08348887.1| protein SanA [Escherichia coli M605]
gi|331653573|ref|ZP_08354574.1| protein SanA [Escherichia coli M718]
gi|331658223|ref|ZP_08359185.1| protein SanA [Escherichia coli TA206]
gi|331663646|ref|ZP_08364556.1| protein SanA [Escherichia coli TA143]
gi|331668843|ref|ZP_08369691.1| protein SanA [Escherichia coli TA271]
gi|331673672|ref|ZP_08374435.1| protein SanA [Escherichia coli TA280]
gi|331678092|ref|ZP_08378767.1| protein SanA [Escherichia coli H591]
gi|331683821|ref|ZP_08384417.1| protein SanA [Escherichia coli H299]
gi|332278702|ref|ZP_08391115.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|84028417|sp|P0AFY4|SANA_ECO57 RecName: Full=Protein sanA
gi|84028418|sp|P0AFY3|SANA_ECOL6 RecName: Full=Protein sanA
gi|84028419|sp|P0AFY2|SANA_ECOLI RecName: Full=Protein sanA
gi|84028420|sp|P0AFY5|SANA_SHIFL RecName: Full=Protein sanA
gi|12516461|gb|AAG57282.1|AE005446_10 vancomycin sensitivity [Escherichia coli O157:H7 str. EDL933]
gi|26108930|gb|AAN81133.1|AE016763_92 SanA protein [Escherichia coli CFT073]
gi|1788466|gb|AAC75205.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|13362505|dbj|BAB36459.1| vancomycin sensitivity [Escherichia coli O157:H7 str. Sakai]
gi|56383603|gb|AAN43751.2| vancomycin resistance protein [Shigella flexneri 2a str. 301]
gi|81241521|gb|ABB62231.1| vancomycin sensitivity [Shigella dysenteriae Sd197]
gi|81244946|gb|ABB65654.1| vancomycin sensitivity [Shigella boydii Sb227]
gi|85675258|dbj|BAE76621.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
gi|91073004|gb|ABE07885.1| SanA protein [Escherichia coli UTI89]
gi|110343945|gb|ABG70182.1| vancomycin resistance SanA protein [Escherichia coli 536]
gi|110615669|gb|ABF04336.1| vancomycin sensitivity [Shigella flexneri 5 str. 8401]
gi|115513470|gb|ABJ01545.1| putative vancomycin sensitivity protein [Escherichia coli APEC O1]
gi|157067304|gb|ABV06559.1| protein SanA [Escherichia coli HS]
gi|157078458|gb|ABV18166.1| protein SanA [Escherichia coli E24377A]
gi|169754467|gb|ACA77166.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169889602|gb|ACB03309.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
gi|170521211|gb|ACB19389.1| protein SanA [Escherichia coli SMS-3-5]
gi|187771031|gb|EDU34875.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|188015314|gb|EDU53436.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|188488646|gb|EDU63749.1| sanA protein [Escherichia coli 53638]
gi|189001931|gb|EDU70917.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|189355324|gb|EDU73743.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|189362843|gb|EDU81262.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|189366094|gb|EDU84510.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|189371366|gb|EDU89782.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|189376621|gb|EDU95037.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|190904514|gb|EDV64221.1| protein SanA [Escherichia coli B7A]
gi|190909633|gb|EDV69218.1| protein SanA [Escherichia coli F11]
gi|192931902|gb|EDV84501.1| protein SanA [Escherichia coli E22]
gi|192955612|gb|EDV86089.1| protein SanA [Escherichia coli E110019]
gi|194424773|gb|EDX40758.1| protein SanA [Escherichia coli 101-1]
gi|208729403|gb|EDZ79004.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208733606|gb|EDZ82293.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208741777|gb|EDZ89459.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209157311|gb|ACI34744.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209766308|gb|ACI81466.1| vancomycin sensitivity [Escherichia coli]
gi|209766310|gb|ACI81467.1| vancomycin sensitivity [Escherichia coli]
gi|209766312|gb|ACI81468.1| vancomycin sensitivity [Escherichia coli]
gi|209766314|gb|ACI81469.1| vancomycin sensitivity [Escherichia coli]
gi|209766316|gb|ACI81470.1| vancomycin sensitivity [Escherichia coli]
gi|209912861|dbj|BAG77935.1| vancomycin resistance protein [Escherichia coli SE11]
gi|215265437|emb|CAS09838.1| vancomycin sensitivity protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217320030|gb|EEC28455.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218352487|emb|CAU98264.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218365831|emb|CAR03572.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370602|emb|CAR18409.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218427857|emb|CAR08772.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|218432769|emb|CAR13663.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222033905|emb|CAP76646.1| Protein sanA [Escherichia coli LF82]
gi|226900975|gb|EEH87234.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|227835549|gb|EEJ46015.1| membrane protein [Escherichia coli 83972]
gi|238863002|gb|ACR65000.1| predicted protein [Escherichia coli BW2952]
gi|242377786|emb|CAQ32549.1| vancomycin sensitivity [Escherichia coli BL21(DE3)]
gi|253323973|gb|ACT28575.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974059|gb|ACT39730.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|253978227|gb|ACT43897.1| hypothetical protein ECD_02073 [Escherichia coli BL21(DE3)]
gi|254593443|gb|ACT72804.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
gi|257754766|dbj|BAI26268.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257759897|dbj|BAI31394.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257765202|dbj|BAI36697.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260448762|gb|ACX39184.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281179236|dbj|BAI55566.1| vancomycin resistance protein [Escherichia coli SE15]
gi|281601601|gb|ADA74585.1| Protein sanA [Shigella flexneri 2002017]
gi|284922129|emb|CBG35210.1| putative exported protein [Escherichia coli 042]
gi|290763271|gb|ADD57232.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|291323324|gb|EFE62752.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|291427820|gb|EFF00847.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|291433075|gb|EFF06054.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|291470971|gb|EFF13455.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|294491745|gb|ADE90501.1| protein SanA [Escherichia coli IHE3034]
gi|298278735|gb|EFI20249.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300299256|gb|EFJ55641.1| protein SanA [Escherichia coli MS 185-1]
gi|300307554|gb|EFJ62074.1| protein SanA [Escherichia coli MS 200-1]
gi|300317301|gb|EFJ67085.1| protein SanA [Escherichia coli MS 175-1]
gi|300358515|gb|EFJ74385.1| protein SanA [Escherichia coli MS 198-1]
gi|300398272|gb|EFJ81810.1| protein SanA [Escherichia coli MS 69-1]
gi|300405726|gb|EFJ89264.1| protein SanA [Escherichia coli MS 84-1]
gi|300408658|gb|EFJ92196.1| protein SanA [Escherichia coli MS 45-1]
gi|300414027|gb|EFJ97337.1| protein SanA [Escherichia coli MS 115-1]
gi|300417675|gb|EFK00986.1| protein SanA [Escherichia coli MS 182-1]
gi|300450587|gb|EFK14207.1| protein SanA [Escherichia coli MS 116-1]
gi|300459647|gb|EFK23140.1| protein SanA [Escherichia coli MS 21-1]
gi|300461695|gb|EFK25188.1| protein SanA [Escherichia coli MS 187-1]
gi|300524789|gb|EFK45858.1| protein SanA [Escherichia coli MS 119-7]
gi|300838239|gb|EFK65999.1| protein SanA [Escherichia coli MS 124-1]
gi|300845015|gb|EFK72775.1| protein SanA [Escherichia coli MS 78-1]
gi|301077459|gb|EFK92265.1| protein SanA [Escherichia coli MS 146-1]
gi|305852135|gb|EFM52587.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|306908783|gb|EFN39280.1| protein of unknown function DUF218 [Escherichia coli W]
gi|307554213|gb|ADN46988.1| vancomycin sensitivity SanA protein [Escherichia coli ABU 83972]
gi|307626315|gb|ADN70619.1| hypothetical protein UM146_06070 [Escherichia coli UM146]
gi|308123308|gb|EFO60570.1| protein SanA [Escherichia coli MS 145-7]
gi|308924161|gb|EFP69659.1| sanA [Shigella dysenteriae 1617]
gi|309702457|emb|CBJ01783.1| putative exported protein [Escherichia coli ETEC H10407]
gi|310332202|gb|EFP99437.1| sanA [Escherichia coli 1827-70]
gi|312287634|gb|EFR15539.1| sanA [Escherichia coli 2362-75]
gi|312946762|gb|ADR27589.1| hypothetical protein NRG857_10875 [Escherichia coli O83:H1 str. NRG
857C]
gi|315061453|gb|ADT75780.1| conserved hypothetical protein [Escherichia coli W]
gi|315136777|dbj|BAJ43936.1| hypothetical protein ECDH1ME8569_2080 [Escherichia coli DH1]
gi|315255344|gb|EFU35312.1| protein SanA [Escherichia coli MS 85-1]
gi|315285785|gb|EFU45225.1| protein SanA [Escherichia coli MS 110-3]
gi|315294491|gb|EFU53839.1| protein SanA [Escherichia coli MS 153-1]
gi|315297992|gb|EFU57262.1| protein SanA [Escherichia coli MS 16-3]
gi|315615383|gb|EFU96015.1| sanA [Escherichia coli 3431]
gi|320176617|gb|EFW51659.1| SanA protein [Shigella dysenteriae CDC 74-1112]
gi|320178908|gb|EFW53871.1| SanA protein [Shigella boydii ATCC 9905]
gi|320186773|gb|EFW61495.1| SanA protein [Shigella flexneri CDC 796-83]
gi|320192233|gb|EFW66878.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320196013|gb|EFW70637.1| SanA protein [Escherichia coli WV_060327]
gi|320641215|gb|EFX10693.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. G5101]
gi|320646603|gb|EFX15514.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. 493-89]
gi|320651858|gb|EFX20233.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. H 2687]
gi|320657582|gb|EFX25380.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663188|gb|EFX30497.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. USDA 5905]
gi|320667939|gb|EFX34842.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. LSU-61]
gi|323152180|gb|EFZ38470.1| sanA [Escherichia coli EPECa14]
gi|323171795|gb|EFZ57439.1| sanA [Escherichia coli LT-68]
gi|323176960|gb|EFZ62550.1| sanA [Escherichia coli 1180]
gi|323188131|gb|EFZ73426.1| sanA [Escherichia coli RN587/1]
gi|323377966|gb|ADX50234.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|323936758|gb|EGB33043.1| hypothetical protein ERCG_02013 [Escherichia coli E1520]
gi|323940787|gb|EGB36975.1| hypothetical protein ERDG_02564 [Escherichia coli E482]
gi|323944960|gb|EGB41025.1| hypothetical protein EREG_03415 [Escherichia coli H120]
gi|323951940|gb|EGB47814.1| hypothetical protein ERKG_01652 [Escherichia coli H252]
gi|323955909|gb|EGB51662.1| hypothetical protein ERLG_02688 [Escherichia coli H263]
gi|323961608|gb|EGB57214.1| hypothetical protein ERGG_01914 [Escherichia coli H489]
gi|323972974|gb|EGB68171.1| hypothetical protein ERHG_01084 [Escherichia coli TA007]
gi|324006549|gb|EGB75768.1| protein SanA [Escherichia coli MS 57-2]
gi|324013975|gb|EGB83194.1| protein SanA [Escherichia coli MS 60-1]
gi|324020612|gb|EGB89831.1| protein SanA [Escherichia coli MS 117-3]
gi|324118016|gb|EGC11915.1| hypothetical protein ERBG_02312 [Escherichia coli E1167]
gi|326339494|gb|EGD63305.1| SanA protein [Escherichia coli O157:H7 str. 1125]
gi|326343955|gb|EGD67716.1| SanA protein [Escherichia coli O157:H7 str. 1044]
gi|330911977|gb|EGH40487.1| SanA protein [Escherichia coli AA86]
gi|331039567|gb|EGI11787.1| protein SanA [Escherichia coli H736]
gi|331043519|gb|EGI15657.1| protein SanA [Escherichia coli M605]
gi|331048422|gb|EGI20498.1| protein SanA [Escherichia coli M718]
gi|331056471|gb|EGI28480.1| protein SanA [Escherichia coli TA206]
gi|331059445|gb|EGI31422.1| protein SanA [Escherichia coli TA143]
gi|331064037|gb|EGI35948.1| protein SanA [Escherichia coli TA271]
gi|331068945|gb|EGI40337.1| protein SanA [Escherichia coli TA280]
gi|331074552|gb|EGI45872.1| protein SanA [Escherichia coli H591]
gi|331078773|gb|EGI49975.1| protein SanA [Escherichia coli H299]
gi|332093241|gb|EGI98301.1| sanA [Shigella boydii 5216-82]
gi|332097513|gb|EGJ02493.1| sanA [Shigella boydii 3594-74]
gi|332101054|gb|EGJ04400.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|332343922|gb|AEE57256.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332754776|gb|EGJ85141.1| sanA [Shigella flexneri 4343-70]
gi|332755182|gb|EGJ85546.1| sanA [Shigella flexneri K-671]
gi|332756426|gb|EGJ86777.1| sanA [Shigella flexneri 2747-71]
gi|333001279|gb|EGK20847.1| sanA [Shigella flexneri VA-6]
gi|333001911|gb|EGK21477.1| sanA [Shigella flexneri K-218]
gi|333002863|gb|EGK22419.1| sanA [Shigella flexneri K-272]
gi|333016609|gb|EGK35938.1| sanA [Shigella flexneri K-304]
gi|333016866|gb|EGK36190.1| sanA [Shigella flexneri K-227]
Length = 239
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|318060469|ref|ZP_07979192.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 262
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 22/185 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R W + +C++ + +I D VV R+
Sbjct: 32 RALWAVVGLCVLALLPSAWIRVASDGGVRAEADVGRAPVAVVFGAGLWDGKPSPYLAHRL 91
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L + ++G + S D ++ R + + Y +T +
Sbjct: 92 DAAARLYAAGRVTAVLVTGDNSRTSYDEPTAMRDYLARAGVPRRQVVRDYAGFDTWDSCV 151
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
A ++V+ +H+ R + Q + + D + +
Sbjct: 152 RAH---RVFGVDRAVLVSQGFHIRRAVALCRAAGIDAQ----GVAARDPHDVTWY--YGA 202
Query: 169 LRVLL 173
+R LL
Sbjct: 203 IRELL 207
>gi|296103792|ref|YP_003613938.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058251|gb|ADF62989.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 239
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPVTMRKDLIAAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|229029997|ref|ZP_04186062.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
gi|229079448|ref|ZP_04211988.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228703818|gb|EEL56264.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228731258|gb|EEL82175.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
Length = 162
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 93 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 120
>gi|84391755|ref|ZP_00991657.1| hypothetical protein V12B01_03238 [Vibrio splendidus 12B01]
gi|84376468|gb|EAP93347.1| hypothetical protein V12B01_03238 [Vibrio splendidus 12B01]
Length = 194
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 10/120 (8%)
Query: 35 PSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISG-VHHSV------SKDILLQKIPIR 86
I VL R+ A EL + I SG V S+ I
Sbjct: 6 TPSDCIFVLCSNDTRVAEYAAELYHQGVAPYIVFSGGVGRFTEGSFERSEAETFAAIARD 65
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINST 144
+ + I I A NT N + + + +V + RT+ +
Sbjct: 66 AGVPDSDIIIEKHATNTGENVRFTHELLTERGLSPKRLTLVQKPFMEKRTYATFSKQWPE 125
>gi|282917710|ref|ZP_06325461.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283767447|ref|ZP_06340362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|282318465|gb|EFB48824.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283461326|gb|EFC08410.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 322
Score = 44.1 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG + + + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|255975750|ref|ZP_05426336.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968622|gb|EET99244.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 337
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|157144916|ref|YP_001452235.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
gi|157082121|gb|ABV11799.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|228952619|ref|ZP_04114695.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069806|ref|ZP_04203089.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|229150501|ref|ZP_04278717.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228632994|gb|EEK89607.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228713341|gb|EEL65233.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|228807085|gb|EEM53628.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 185
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|227529308|ref|ZP_03959357.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350736|gb|EEJ41027.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 315
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 27/189 (14%)
Query: 17 MGFISFIRYVKQMHIPDHP-SVSAIVVLTGE----------PIRIERAFELLENQIGEKI 65
+G + F + + P ++ L R+++A + I
Sbjct: 125 LGLVIFWGAIITAQLLSRPVKADYLIALGAGLRQGKVPPVLTARLQQAIACWKLNHNATI 184
Query: 66 FISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FH 120
++G +S+ + K I + + I + +A+NT N + +K
Sbjct: 185 IVTGGILHGEQLSEAQAMAKYLINHGIPQDRIILEEQAMNTWDNLRNCQRLLQKQADPKQ 244
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
++++T +H+ RTF L+++ + +P++S + + + +YL I+
Sbjct: 245 KIVVITSSFHIFRTFNYLRKLK-----LSWPLVSSK---TPWKLQPLTV---VRDYLGII 293
Query: 181 LLSIQLSLS 189
+ L+
Sbjct: 294 RDHYRSWLA 302
>gi|218233505|ref|YP_002366978.1| hypothetical protein BCB4264_A2261 [Bacillus cereus B4264]
gi|218161462|gb|ACK61454.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 185
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|62180771|ref|YP_217188.1| hypothetical protein SC2201 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128404|gb|AAX66107.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715246|gb|EFZ06817.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 260
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 90 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 144
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 145 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 194
>gi|238785456|ref|ZP_04629441.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
gi|238713661|gb|EEQ05688.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
Length = 253
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 12/120 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ I + I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLIAAGVPPADIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
Y T + + N+F +I+T +H R Q + +Q + + S
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALFIAQHM--GIQAQCFAVPSPK 173
>gi|229044023|ref|ZP_04191712.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
gi|228725304|gb|EEL76572.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
Length = 162
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVAVEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 93 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 120
>gi|324112073|gb|EGC06051.1| hypothetical protein ERIG_03041 [Escherichia fergusonii B253]
Length = 230
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|331654688|ref|ZP_08355688.1| conserved hypothetical protein [Escherichia coli M718]
gi|331048070|gb|EGI20147.1| conserved hypothetical protein [Escherichia coli M718]
Length = 230
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|293416524|ref|ZP_06659163.1| ygjQ protein [Escherichia coli B185]
gi|291431880|gb|EFF04863.1| ygjQ protein [Escherichia coli B185]
Length = 230
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|229178646|ref|ZP_04306010.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
gi|228604804|gb|EEK62261.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
Length = 166
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 37 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 97 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 124
>gi|229838045|ref|ZP_04458204.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229694411|gb|EEO84458.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
Length = 375
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ + I ++G ++ L+ I++ + I A +T
Sbjct: 224 QRLEKTLEIAQQLPDALIIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVE 283
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
NA + K+ + +I++ H+ R
Sbjct: 284 NALYSRYALAKHRIKNAIIISSGSHVRRA 312
>gi|30020365|ref|NP_831996.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229109718|ref|ZP_04239304.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|229127675|ref|ZP_04256664.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|229144871|ref|ZP_04273268.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|296502841|ref|YP_003664541.1| hypothetical protein BMB171_C2008 [Bacillus thuringiensis BMB171]
gi|29895916|gb|AAP09197.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228638593|gb|EEK95026.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|228655752|gb|EEL11601.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|228673759|gb|EEL29017.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|296323893|gb|ADH06821.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 185
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVAVEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|22125571|ref|NP_668994.1| hypothetical protein y1676 [Yersinia pestis KIM 10]
gi|45442116|ref|NP_993655.1| hypothetical protein YP_2326 [Yersinia pestis biovar Microtus str.
91001]
gi|51596866|ref|YP_071057.1| hypothetical protein YPTB2547 [Yersinia pseudotuberculosis IP
32953]
gi|108807998|ref|YP_651914.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|108812268|ref|YP_648035.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|145599203|ref|YP_001163279.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149365580|ref|ZP_01887615.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948076|ref|YP_001400474.1| hypothetical protein YpsIP31758_1496 [Yersinia pseudotuberculosis
IP 31758]
gi|162421029|ref|YP_001606261.1| hypothetical protein YpAngola_A1772 [Yersinia pestis Angola]
gi|165925576|ref|ZP_02221408.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937616|ref|ZP_02226178.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008093|ref|ZP_02228991.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213796|ref|ZP_02239831.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398638|ref|ZP_02304162.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422234|ref|ZP_02313987.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426954|ref|ZP_02318707.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466398|ref|ZP_02331102.1| hypothetical protein YpesF_00560 [Yersinia pestis FV-1]
gi|170023842|ref|YP_001720347.1| hypothetical protein YPK_1601 [Yersinia pseudotuberculosis YPIII]
gi|186895947|ref|YP_001873059.1| hypothetical protein YPTS_2642 [Yersinia pseudotuberculosis PB1/+]
gi|218929600|ref|YP_002347475.1| hypothetical protein YPO2511 [Yersinia pestis CO92]
gi|229895244|ref|ZP_04510418.1| putative exported protein [Yersinia pestis Pestoides A]
gi|229898605|ref|ZP_04513750.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902604|ref|ZP_04517721.1| putative exported protein [Yersinia pestis Nepal516]
gi|270490215|ref|ZP_06207289.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294504263|ref|YP_003568325.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|21958474|gb|AAM85245.1|AE013770_11 hypothetical [Yersinia pestis KIM 10]
gi|45436979|gb|AAS62532.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51590148|emb|CAH21785.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108775916|gb|ABG18435.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|108779911|gb|ABG13969.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|115348211|emb|CAL21139.1| putative exported protein [Yersinia pestis CO92]
gi|145210899|gb|ABP40306.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149291993|gb|EDM42067.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152959571|gb|ABS47032.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353844|gb|ABX87792.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165914366|gb|EDR32981.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922685|gb|EDR39836.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992475|gb|EDR44776.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204970|gb|EDR49450.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958740|gb|EDR55761.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051142|gb|EDR62550.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054056|gb|EDR63884.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750376|gb|ACA67894.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
gi|186698973|gb|ACC89602.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229680051|gb|EEO76150.1| putative exported protein [Yersinia pestis Nepal516]
gi|229688153|gb|EEO80224.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229701730|gb|EEO89755.1| putative exported protein [Yersinia pestis Pestoides A]
gi|262362382|gb|ACY59103.1| hypothetical protein YPD4_2196 [Yersinia pestis D106004]
gi|262366310|gb|ACY62867.1| hypothetical protein YPD8_2190 [Yersinia pestis D182038]
gi|270338719|gb|EFA49496.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294354722|gb|ADE65063.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|320014659|gb|ADV98230.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 375
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ + I ++G ++ L+ I++ + I A +T
Sbjct: 224 QRLEKTLEIAQQLPDALIIVTGGVPQNNQTEGKLMADWLIKKGIKPERIYQDNYARSTVE 283
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
NA + K+ + +I++ H+ R
Sbjct: 284 NALYSRYALAKHRIKNAIIISSGSHVRRA 312
>gi|284007104|emb|CBA72379.1| transport protein [Arsenophonus nasoniae]
Length = 232
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 26/176 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISF--------IRYVKQMHIPDHPSVSAIVV------LTGEP 47
++ Y L ++ I+ ++F Y+ P +++ TG P
Sbjct: 4 KFLIYSLLTIIVTAIVAILTFDRWISWKTADYIYDDVKKLPPRSVGMILGTSKFYSTGSP 63
Query: 48 I-----RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
RI+ A + + + +SG H++ ++ I +++ I + I + +
Sbjct: 64 NEYYKYRIQGAINAYNSGKIKYLLVSGDNAHYNYNEPITMRRDLIAAGIPAAKIVLDFAG 123
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + NNF I+T +H R + + Y + S
Sbjct: 124 FRTLDSVIRTRQVFATNNFT---IITQRFHCERAL--FIAMKKGIDAQCYAVSSPK 174
>gi|302519757|ref|ZP_07272099.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302428652|gb|EFL00468.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 254
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 22/185 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R W + +C++ + +I D VV R+
Sbjct: 24 RALWAVVGLCVLALLPSAWIRVASDGGVRAEADVGRAPVAVVFGAGLWDGKPSPYLAHRL 83
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L + ++G + S D ++ R + + Y +T +
Sbjct: 84 DAAARLYAAGRVTAVLVTGDNSRTSYDEPTAMRDYLARAGVPRRQVVRDYAGFDTWDSCV 143
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
A ++V+ +H+ R + Q + + D + +
Sbjct: 144 RAH---RVFGVDRAVLVSQGFHIRRAVALCRAAGIDAQ----GVAARDPHDVTWY--YGA 194
Query: 169 LRVLL 173
+R LL
Sbjct: 195 IRELL 199
>gi|229490318|ref|ZP_04384160.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322850|gb|EEN88629.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 206
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 17/147 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RI 50
R G + + + G + V ++ D AIVVL G R+
Sbjct: 6 RRLIAGAVLMAVVLVGGTAFRVWQVARID--DTRPADAIVVL-GAAQYSGTPSSVFEARL 62
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E+A++L + + +I G ++ + + + I +T +
Sbjct: 63 EQAYKLYKRGVAPQIITVGGKQEGDEYTEAASGKMYLTDRGIPSSAITAVETGSDTLLSI 122
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRT 134
SA + ++V+ +H RT
Sbjct: 123 DAVSAEMSSQGINSAVLVSDPWHSLRT 149
>gi|110802817|ref|YP_698118.1| hypothetical protein CPR_0793 [Clostridium perfringens SM101]
gi|110683318|gb|ABG86688.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 206
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E + L+ K+ +SG + + + ++ + + + I K+ +T
Sbjct: 64 QERLEEGLKYLKLHPNTKVIVSGGQGSNEPIPESEAMKIFFVNKGINPNRIIEEDKSKST 123
Query: 104 EGNAQEASAWAEKNNF--HHVLIVTHDYHMPRT 134
N + + E+ + VLIVT D+H+ R
Sbjct: 124 FQNLEFSKKILEERHANKDEVLIVTSDFHLFRA 156
>gi|49184541|ref|YP_027793.1| hypothetical protein BAS1526 [Bacillus anthracis str. Sterne]
gi|49477297|ref|YP_035830.1| hypothetical protein BT9727_1498 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165869545|ref|ZP_02214204.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167633396|ref|ZP_02391721.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639097|ref|ZP_02397370.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686196|ref|ZP_02877418.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706539|ref|ZP_02896999.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650599|ref|ZP_02933566.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190566262|ref|ZP_03019180.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|254683202|ref|ZP_05147063.1| hypothetical protein BantC_05040 [Bacillus anthracis str.
CNEVA-9066]
gi|254723792|ref|ZP_05185578.1| hypothetical protein BantA1_15178 [Bacillus anthracis str. A1055]
gi|254734554|ref|ZP_05192266.1| hypothetical protein BantWNA_05205 [Bacillus anthracis str. Western
North America USA6153]
gi|254740963|ref|ZP_05198651.1| hypothetical protein BantKB_08062 [Bacillus anthracis str. Kruger
B]
gi|254755205|ref|ZP_05207239.1| hypothetical protein BantV_22267 [Bacillus anthracis str. Vollum]
gi|254759741|ref|ZP_05211765.1| hypothetical protein BantA9_15636 [Bacillus anthracis str.
Australia 94]
gi|270000571|ref|NP_844092.2| hypothetical protein BA_1645 [Bacillus anthracis str. Ames]
gi|49178468|gb|AAT53844.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49328853|gb|AAT59499.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714985|gb|EDR20503.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512887|gb|EDR88260.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531434|gb|EDR94112.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128637|gb|EDS97504.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669893|gb|EDT20634.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083743|gb|EDT68803.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190562397|gb|EDV16364.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|269850294|gb|AAP25578.2| conserved hypothetical protein [Bacillus anthracis str. Ames]
Length = 192
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+ + MGF+ + Y K + I+VL RI++A E
Sbjct: 13 IIMVCVVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEY 69
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L++ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 70 LKSHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPL 129
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 130 IPDN-MKKGMIVTNDFHMFRA 149
>gi|326779511|ref|ZP_08238776.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326659844|gb|EGE44690.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 286
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + ++G + V + ++ + + + I Y ++
Sbjct: 133 AHRLDAAAELYRTGKVKVVLVTGDNSRVEYDEPDAMRTYLTGRGVPDERIVSDYAGFDSW 192
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A ++V+ +H+ R + Y + + + +
Sbjct: 193 DSCVRAKKIF---GVDRAVLVSQGFHIHRAVTLCRSAGID----AYGVGVDEPRDATWY 244
>gi|295108464|emb|CBL22417.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 194
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 22/165 (13%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSV----------------- 74
+ I + ++ E+A L + + SG +
Sbjct: 18 EPEKADIIFIPGNGYSQMAEKAAALYGEKYAPFVLPSGKYSITVDKFCGVLSGQERYNGN 77
Query: 75 --SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYH 130
++ L+ + ++ + + I +A T NA+ + +K L+ +YH
Sbjct: 78 YRTEWEFLKDVLVKNHVPDEVILKEDQATFTWENARLSREVTDKAGIEIKKALLCCKNYH 137
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
R + QR +F P + + + + + ++ +L E
Sbjct: 138 ARRALMYYQRAYPEAEFRVCPCCVDGVTKENWMNAEESIQSVLGE 182
>gi|320199739|gb|EFW74328.1| SanA protein [Escherichia coli EC4100B]
Length = 239
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPTDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|324114440|gb|EGC08409.1| hypothetical protein ERIG_00979 [Escherichia fergusonii B253]
Length = 239
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|218549557|ref|YP_002383348.1| hypothetical protein EFER_2229 [Escherichia fergusonii ATCC 35469]
gi|218357098|emb|CAQ89731.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|325497957|gb|EGC95816.1| hypothetical protein ECD227_2054 [Escherichia fergusonii ECD227]
Length = 239
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|157804267|ref|YP_001492816.1| succinyl-diaminopimelate desuccinylase [Rickettsia canadensis str.
McKiel]
gi|157785530|gb|ABV74031.1| succinyl-diaminopimelate desuccinylase [Rickettsia canadensis str.
McKiel]
Length = 39
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINS 143
N +++V H+Y+MP +L++
Sbjct: 2 TYNLTSIILVEHNYNMPFMLNKLEKAIP 29
>gi|77745325|gb|ABB02563.1| unknown [Lactobacillus reuteri]
Length = 271
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 28/175 (16%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG--VHHS-V 74
GF+ VK +P VL R+++A + KI SG V +
Sbjct: 108 GFLVLGAAVKHGQVPP--------VL---ATRLDKAINCWKTHQSAKIIGSGGIVQKAKE 156
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S+ ++ I + I K LNT N AS + V++VT D+H+ R
Sbjct: 157 SEAEVMAGYLIAHGIPARKIIRENKGLNTWQNLAFASQLIKPQE--TVVVVTSDFHVLRA 214
Query: 135 FLELQRINSTVQFI---------PYPIISHDL---EENSSIFKIKILRVLLIEYL 177
+++ FI P I L ++ +F L +LL+E++
Sbjct: 215 RAYARKMGLNWSFISSKTPWRYCPLTFIRDYLGIIRDHWWVFCGSTLFLLLVEFI 269
>gi|21220935|ref|NP_626714.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289771792|ref|ZP_06531170.1| integral membrane protein [Streptomyces lividans TK24]
gi|6759567|emb|CAB69760.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289701991|gb|EFD69420.1| integral membrane protein [Streptomyces lividans TK24]
Length = 228
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 16/148 (10%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R + C++ + ++ + + + D P VV R+
Sbjct: 20 RLVRVVVAGCVLALLPSAWLRVVTDDRLRTVADVPRTEVAVVFGAGLWDGEPSPYLAHRL 79
Query: 51 ERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A EL + ++G + + ++ +R + + I Y +T +
Sbjct: 80 DAAAELYRAGRIAVVLVTGDNSREEYDEPDAMRAYLVRHGVPDGRIVSDYAGFDTWDSCV 139
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A ++++ +H+ R
Sbjct: 140 RAKKIF---GVDRAVLISQGFHIRRAVA 164
>gi|82751953|ref|YP_417694.1| hypothetical protein SAB2237 [Staphylococcus aureus RF122]
gi|258425099|ref|ZP_05687970.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|82657484|emb|CAI81926.1| probable membrane protein [Staphylococcus aureus RF122]
gi|257844933|gb|EEV68976.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 322
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG + + + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|332753148|gb|EGJ83532.1| hypothetical protein SF434370_3328 [Shigella flexneri 4343-70]
Length = 203
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|291556712|emb|CBL33829.1| Uncharacterized conserved protein [Eubacterium siraeum V10Sc8a]
Length = 201
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 24/166 (14%)
Query: 33 DHPSVSAIVVLTGEPI--RIERAFELLENQIGEKIFISG-----------------VHHS 73
+ V AI L G + E A EL + + I SG ++
Sbjct: 18 EPQKVDAIF-LPGGSHPEQPEYAAELYRQGLTDWIVPSGGVSVKEEKWHGVRSKAEIYSG 76
Query: 74 VSKD--ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDY 129
+ + ++ + + I K+ +T NA + ++ +IV +
Sbjct: 77 DYRSDCEFFTDVLVKNGVPQTAIIEEGKSGHTRDNAFLSRKAVDEKGIMIKSGIIVCKAF 136
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
H R + Q V P+ +++ + + K +L E
Sbjct: 137 HARRCLMLYQMAFPNVDMTVCPVHCYNITKENWYTTEKGTDRVLGE 182
>gi|257419391|ref|ZP_05596385.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257161219|gb|EEU91179.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 337
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGKGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLSQNIPAEAILMEGQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|222034815|emb|CAP77558.1| Uncharacterized protein ygjQ [Escherichia coli LF82]
gi|307555191|gb|ADN47966.1| hypothetical protein YgjQ [Escherichia coli ABU 83972]
gi|312947655|gb|ADR28482.1| putative thioredoxin-like protein [Escherichia coli O83:H1 str. NRG
857C]
Length = 230
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|145220256|ref|YP_001130965.1| hypothetical protein Cvib_1452 [Prosthecochloris vibrioformis DSM
265]
gi|145206420|gb|ABP37463.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 246
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 24/147 (16%)
Query: 27 KQMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV- 70
+++ + AIVVL G R E +L + +G
Sbjct: 62 RRVAVSSIAPAEAIVVLGGMTLQIPGAPSGEWGDAADRFEAGVDLFRAGRAPLLVFTGGR 121
Query: 71 ----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ + LL++ + + + + A NT A+ A+ N +++VT
Sbjct: 122 LPWRENFEPEGELLRRRAVLLGVPADGVRVTGIAGNTAEEARAAARLLGPN--KRIILVT 179
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPII 153
+HM R+ + +P+ +
Sbjct: 180 SAFHMTRSLRLFRSA--GFTVVPFRVD 204
>gi|315617162|gb|EFU97771.1| conserved hypothetical protein [Escherichia coli 3431]
Length = 203
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|260768719|ref|ZP_05877653.1| SanA protein [Vibrio furnissii CIP 102972]
gi|260616749|gb|EEX41934.1| SanA protein [Vibrio furnissii CIP 102972]
Length = 235
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L E +SG H S ++ +++ ++ + I + Y T
Sbjct: 59 HRINAAIDLFEQGKVNGFLLSGDNAHRSYNEPWTMKRDLLKAGVPNEQIYLDYAGFRTLD 118
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ A + +NF LI+T +H R + + +
Sbjct: 119 SIVRAKRIFDTDNF---LIITQRFHCERAL--FIANHHDINATCLAVPGP 163
>gi|218554709|ref|YP_002387622.1| hypothetical protein ECIAI1_2221 [Escherichia coli IAI1]
gi|300819165|ref|ZP_07099367.1| protein SanA [Escherichia coli MS 107-1]
gi|218361477|emb|CAQ99066.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|300528318|gb|EFK49380.1| protein SanA [Escherichia coli MS 107-1]
gi|323184233|gb|EFZ69610.1| sanA [Escherichia coli 1357]
Length = 239
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + ++K I + I + Y T +
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPTDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|296270446|ref|YP_003653078.1| hypothetical protein Tbis_2482 [Thermobispora bispora DSM 43833]
gi|296093233|gb|ADG89185.1| protein of unknown function DUF218 [Thermobispora bispora DSM
43833]
Length = 218
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 9/105 (8%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEG 105
A +L N + +I +G + + + ++ ++ + I + +A NT
Sbjct: 46 AADLYRNGLFPRIVFTGANAPTTIERFPRGEAVHFREEAVKLGVPGEAILLETRATNTGE 105
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + V +++ Y R + +R+ V+ +
Sbjct: 106 NIAFTRELLAELGIEVRSVTLISRPYQERRAYATCRRLWPEVEVV 150
>gi|224477345|ref|YP_002634951.1| hypothetical protein Sca_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421952|emb|CAL28766.1| hypothetical protein SCA_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 329
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 17/117 (14%)
Query: 36 SVSAIVVLTGE----------PIRIERAFELLENQIGE-KIFISGV---HHSVSKDILLQ 81
+ I+VL R++RA L Q I +SG VS+ ++
Sbjct: 147 PTNLIIVLGAGLYREKVTQMLAWRLDRAVALYFAQEQPVYIIVSGGKGEGEHVSEAEAMK 206
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFH--HVLIVTHDYHMPRTF 135
I + + E I + ++ +T N F ++ IVT +H+ R
Sbjct: 207 AYLIEEHIPENHILMEDESHSTYENLANTKQILHDRLAFRPENMTIVTSQFHILRAL 263
>gi|172038633|ref|YP_001805134.1| hypothetical protein cce_3720 [Cyanothece sp. ATCC 51142]
gi|171700087|gb|ACB53068.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 244
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 17/141 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVK---QMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
+ W F + +MG I V ++ I + +V I VL G IR E +
Sbjct: 14 KRKWKKRFKLIFLLLMGLILASLTVNLLVRLPINSNHTVDGIFVL-GGSIRREIYAAQIA 72
Query: 59 NQIGEKIFISGVHHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
++ E I V + + + Q E C A +T N
Sbjct: 73 SEYPEVPII--VSQGSKPPCIKLIFQREHARMDQVWIEQC------ANSTFDNFFFGIPL 124
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
+K+ H V ++T H+PR
Sbjct: 125 LQKHGVHKVKVITSQSHLPRA 145
>gi|26249675|ref|NP_755715.1| hypothetical protein c3844 [Escherichia coli CFT073]
gi|227887811|ref|ZP_04005616.1| membrane protein [Escherichia coli 83972]
gi|300973024|ref|ZP_07172048.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301048072|ref|ZP_07195112.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|26110103|gb|AAN82289.1|AE016767_49 Hypothetical protein ygjQ [Escherichia coli CFT073]
gi|227835207|gb|EEJ45673.1| membrane protein [Escherichia coli 83972]
gi|300300086|gb|EFJ56471.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300410916|gb|EFJ94454.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|315294962|gb|EFU54299.1| conserved hypothetical protein [Escherichia coli MS 153-1]
Length = 233
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 79 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 138
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 139 VVRAKKVFGENHIT---IISQEFHNQRAI 164
>gi|318604986|emb|CBY26484.1| sana protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 281
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ + + I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLMAAGVPASDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|320159372|ref|YP_004191750.1| hypothetical protein VVM_03209 [Vibrio vulnificus MO6-24/O]
gi|319934684|gb|ADV89547.1| uncharacterized conserved protein [Vibrio vulnificus MO6-24/O]
Length = 361
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 20/134 (14%)
Query: 38 SAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIP 84
AIV L G R+E + + I ++G K L+
Sbjct: 189 DAIVTLGYALNPDGSMHDILIERLETTLAMAKANPEALIILTGGVPQNHKTEGKLMADWL 248
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---Q 139
I + ++ I A +T NA ++ ++ H I++ H+ R T E+ Q
Sbjct: 249 IERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFEIATWQ 308
Query: 140 RINSTVQF--IPYP 151
+ F + YP
Sbjct: 309 TGPRNITFDTVAYP 322
>gi|74312667|ref|YP_311086.1| hypothetical protein SSON_2200 [Shigella sonnei Ss046]
gi|73856144|gb|AAZ88851.1| vancomycin sensitivity [Shigella sonnei Ss046]
gi|323168717|gb|EFZ54397.1| sanA [Shigella sonnei 53G]
Length = 239
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|37677322|ref|NP_937718.1| hypothetical protein VVA1662 [Vibrio vulnificus YJ016]
gi|37201868|dbj|BAC97688.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 361
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 20/134 (14%)
Query: 38 SAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIP 84
AIV L G R+E + + I ++G K L+
Sbjct: 189 DAIVTLGYALNPDGSMHDILIERLETTLAMAKANPEALIILTGGVPQNHKTEGKLMADWL 248
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---Q 139
I + ++ I A +T NA ++ ++ H I++ H+ R T E+ Q
Sbjct: 249 IERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFEIATWQ 308
Query: 140 RINSTVQF--IPYP 151
+ F + YP
Sbjct: 309 TGPRNITFDTVAYP 322
>gi|315180420|gb|ADT87334.1| sanA protein [Vibrio furnissii NCTC 11218]
Length = 235
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L E +SG H S ++ +++ ++ + I + Y T
Sbjct: 59 HRINAAIDLFEQGKVNGFLLSGDNAHRSYNEPWTMKRDLLKAGVPNEQIYLDYAGFRTLD 118
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ A + +NF LI+T +H R + + +
Sbjct: 119 SIVRAKRIFDTDNF---LIITQRFHCERAL--FIANHHDINATCLAVPGP 163
>gi|170767500|ref|ZP_02901953.1| protein SanA [Escherichia albertii TW07627]
gi|170123834|gb|EDS92765.1| protein SanA [Escherichia albertii TW07627]
Length = 239
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|312139306|ref|YP_004006642.1| hypothetical protein REQ_18910 [Rhodococcus equi 103S]
gi|311888645|emb|CBH47957.1| putative secreted protein [Rhodococcus equi 103S]
Length = 206
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A + K+ +SG ++ + + + + I + + +T
Sbjct: 96 SRLNTAAAIARLHPANKVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTV 155
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NA+ + ++VT H+ R Q + +++P
Sbjct: 156 DNARNTTQILSAAGADGAVLVTSASHIDRALATFQSASGQFRYVP 200
>gi|290960619|ref|YP_003491801.1| hypothetical protein SCAB_62441 [Streptomyces scabiei 87.22]
gi|260650145|emb|CBG73261.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 221
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 11/129 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + + ++G + V + ++ + + I Y +T
Sbjct: 69 ARRLDAAAELYRSGRIKVVLVTGDNSRVEYDEPDAMRGYLTEHGVPDDRIVSDYAGFDTW 128
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A ++++ +H+ R + Y + D + +
Sbjct: 129 DSCVRARKIF---GVDRAVLISQGFHIRRAVALCEEAG----VESYGVGVQDRHDATWY- 180
Query: 165 KIKILRVLL 173
R L
Sbjct: 181 -YGATRELF 188
>gi|182435761|ref|YP_001823480.1| hypothetical protein SGR_1968 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464277|dbj|BAG18797.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 336
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 23/155 (14%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA-- 53
GL V F + F+ + ++ + +VVL R++R
Sbjct: 130 GLAVYFSFLFLCFVCYAFLYGRLRV--RRKADFVVVLGSGLVGGSTVPPLLASRLKRGQA 187
Query: 54 --FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L + SG + + + + + E I+ ++ NTE N +
Sbjct: 188 VHARLSRRGGSPVLITSGGQGPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLR 247
Query: 109 EASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRI 141
+ A EK ++ V +VT++YH R L +R+
Sbjct: 248 FSKAIMEKAKPDYRCV-VVTNNYHAFRAALTARRV 281
>gi|325673388|ref|ZP_08153079.1| transporter [Rhodococcus equi ATCC 33707]
gi|325555409|gb|EGD25080.1| transporter [Rhodococcus equi ATCC 33707]
Length = 199
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A + K+ +SG ++ + + + + I + + +T
Sbjct: 89 SRLNTAAAIARLHPANKVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTV 148
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NA+ + ++VT H+ R Q + +++P
Sbjct: 149 DNARNTTQILSAAGADGAVLVTSASHIDRALATFQSASGQFRYVP 193
>gi|240146766|ref|ZP_04745367.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201050|gb|EEU99334.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|291536643|emb|CBL09755.1| Uncharacterized conserved protein [Roseburia intestinalis M50/1]
gi|291541019|emb|CBL14130.1| Uncharacterized conserved protein [Roseburia intestinalis XB6B4]
Length = 256
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 22/150 (14%)
Query: 3 YFWYGLFVCLIFFIMGFIS--FIRYVKQMHIPDHPSVSAIVVLTGE------------PI 48
+ L V ++ IM ++ F+ +H P + + VVL
Sbjct: 68 WICVFLLVLVLIMIMTVLAETFLMIHSALHTPPQNTTA--VVL--GCSVKGTKPSRILEE 123
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A++ L +SG +++ + ++ ++ ++E + + ++ TE
Sbjct: 124 RIDAAYDYLSVNKDAVCILSGGRGPGEDITEAQCMYEVLTKRGISENRLILEERSTTTEE 183
Query: 106 NAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + + V +VT ++H R
Sbjct: 184 NLKYTGEILKDRGLDMTVTLVTSEFHEYRA 213
>gi|312171960|emb|CBX80217.1| Uncharacterized protein ycbC [Erwinia amylovora ATCC BAA-2158]
Length = 262
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 41/145 (28%), Gaps = 29/145 (20%)
Query: 38 SAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV----HHSVSK 76
IVVL G R+ + K+ +G + S
Sbjct: 80 DYIVVLGGGYTWNLQWAPSSNMLNNSLPRLAEGIRIWRANPQAKLIFTGGKAQHNPMSSA 139
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A I + K +TE A E + F +VT H+PR
Sbjct: 140 AVTASVAQSLGVPAAAIIILD-KPRDTEQEAHEVAKIVHNQPF---ALVTSANHLPRAIR 195
Query: 137 ELQRINSTVQFIPYPIISHDLEENS 161
Q P+P ++ L S
Sbjct: 196 FFQYQG----LQPWPAPANQLAVAS 216
>gi|326776386|ref|ZP_08235651.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326656719|gb|EGE41565.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 23/155 (14%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA-- 53
GL V F + F+ + ++ + +VVL R++R
Sbjct: 130 GLAVYFSFLFLCFVCYAFLYGRLRV--RRKADFVVVLGSGLVGGSTVPPLLASRLKRGQA 187
Query: 54 --FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L + SG + + + + + E I+ ++ NTE N +
Sbjct: 188 VHARLSRRGGSPVLITSGGQGPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLR 247
Query: 109 EASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRI 141
+ A EK ++ V +VT++YH R L +R+
Sbjct: 248 FSKAIMEKAKPDYRCV-VVTNNYHAFRAALTARRV 281
>gi|317132721|ref|YP_004092035.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
gi|315470700|gb|ADU27304.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
Length = 258
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 22/187 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIR----------IE 51
R+ W +C+ +SF + P+ + +VVL + I
Sbjct: 70 RFLWSVSLLCMAIVCWMAVSFTAIILVGRGSTPPAGATVVVLGEGSYKGVPDFNQLIGIT 129
Query: 52 RAFELLENQIGEKIFIS-GVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L S GV +S + + + ++ I + ++ T N
Sbjct: 130 AAGNYLRTHPSAMCIASGGVTTDISPADATAIRDVLISQYQISSDRIFVENQSRTTHENM 189
Query: 108 QEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ + + ++ + +H+ R + I + +PY + +
Sbjct: 190 LYSKKIIQAHGLSRNIAVAAPAFHLLRA----EMIARRMGLVPYGLPGKVYPQQQW---P 242
Query: 167 KILRVLL 173
+R L
Sbjct: 243 NYVRELF 249
>gi|238753514|ref|ZP_04614877.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
gi|238708467|gb|EEQ00822.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
Length = 259
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 44/141 (31%), Gaps = 31/141 (21%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG------V 70
H V IVVL G R+ L Q G K+ +G V
Sbjct: 76 HDRVDYIVVLGGGYTFNPNWAPSANLFPNSLPRVTEGIRLYLQQPGSKLVFTGGSGPDGV 135
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S + + + I K +TE A E + L+VT H
Sbjct: 136 QSSARTAAGVAE---SLGVPVTDIIALEKPKDTEEEAAEVALLV---GNKPFLLVTSANH 189
Query: 131 MPRTFLELQRINSTVQFIPYP 151
+PR ++ +Q IP P
Sbjct: 190 LPRAIKFF--TDNGMQPIPAP 208
>gi|17229308|ref|NP_485856.1| hypothetical protein all1816 [Nostoc sp. PCC 7120]
gi|17130906|dbj|BAB73515.1| all1816 [Nostoc sp. PCC 7120]
Length = 215
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 27/171 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD------HPSVSAIVVLTGEP-------- 47
++ + L + + F + I + A +VL G
Sbjct: 22 KWLFRILITIISALL-----FAISSTAISIYSYGSNSYNNKADAAIVL-GAAVWGEEPSP 75
Query: 48 ---IRIERAFELLENQI-GEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKAL 101
RI A L +N + IF GV + + I + + + ++
Sbjct: 76 VFRERINHAINLYKNGAISKIIFTGGVGEINELAEAIVGRNYAIARGVKAADVLTETQSR 135
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHD-YHMPRTFLELQRINSTVQFIPYP 151
T N + A N ++ D H+ R L + + P P
Sbjct: 136 TTYQNLKNAIEVVGTNEKPTKFLIISDPLHLKRAVLMARNLGIDAYPSPTP 186
>gi|49484573|ref|YP_041797.1| hypothetical protein SAR2444 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423840|ref|ZP_05600269.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426523|ref|ZP_05602925.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429159|ref|ZP_05605546.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257431805|ref|ZP_05608168.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257434765|ref|ZP_05610816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282902270|ref|ZP_06310163.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|282906699|ref|ZP_06314547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909675|ref|ZP_06317484.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911921|ref|ZP_06319717.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915217|ref|ZP_06322994.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282920941|ref|ZP_06328659.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282925847|ref|ZP_06333495.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|283959139|ref|ZP_06376580.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497613|ref|ZP_06665467.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511192|ref|ZP_06669888.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|293549800|ref|ZP_06672472.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295428939|ref|ZP_06821563.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589565|ref|ZP_06948206.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49242702|emb|CAG41426.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272858|gb|EEV04960.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276154|gb|EEV07605.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279640|gb|EEV10227.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282684|gb|EEV12816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285361|gb|EEV15477.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282312676|gb|EFB43080.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|282315356|gb|EFB45740.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282320938|gb|EFB51272.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282323617|gb|EFB53933.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326249|gb|EFB56553.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329598|gb|EFB59119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596729|gb|EFC01688.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|283788731|gb|EFC27558.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290918847|gb|EFD95923.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096544|gb|EFE26802.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465818|gb|EFF08348.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|295127288|gb|EFG56930.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297578076|gb|EFH96789.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312437225|gb|ADQ76296.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193624|gb|EFU24020.1| hypothetical protein CGSSa00_14298 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 322
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 21/164 (12%)
Query: 34 HPSVSAIVVLTGE----------PIRIERAFELLENQI-GEKIFISGV---HHSVSKDIL 79
+ V I+VL R++RA ++ + Q KI +SG + + +
Sbjct: 144 NKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQQQASATKIIVSGGQGPDEPIPEALA 203
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLE 137
+Q+ I + + I + ++NT N + + ++ VT +H+ R
Sbjct: 204 MQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRL 263
Query: 138 LQRINSTVQFI----PYPIISHDLEENSSIFKIKILRVLLIEYL 177
Q++ ++ + PY H L ++ + + R+LL Y
Sbjct: 264 AQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQYRLLLTLYC 306
>gi|292487838|ref|YP_003530713.1| hypothetical protein EAMY_1355 [Erwinia amylovora CFBP1430]
gi|292899065|ref|YP_003538434.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291198913|emb|CBJ46023.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291553260|emb|CBA20305.1| Uncharacterized protein ycbC [Erwinia amylovora CFBP1430]
Length = 262
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 41/145 (28%), Gaps = 29/145 (20%)
Query: 38 SAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV----HHSVSK 76
IVVL G R+ + K+ +G + S
Sbjct: 80 DYIVVLGGGYTWNLQWAPSSNMLNNSLPRLAEGIRIWRANPQAKLIFTGGKAQHNPMSSA 139
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A I + K +TE A E + F +VT H+PR
Sbjct: 140 AVTASVAQSLGVPAAAIIILD-KPRDTEQEAHEVAKIVHNQPF---ALVTSANHLPRAIR 195
Query: 137 ELQRINSTVQFIPYPIISHDLEENS 161
Q P+P ++ L S
Sbjct: 196 FFQYQG----LQPWPAPANQLAVAS 216
>gi|313638523|gb|EFS03686.1| integral membrane protein [Listeria seeligeri FSL S4-171]
Length = 344
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 6 YGLFVCLIFFIMGFISFIR-------YVKQMHIPDHPSVSAIVV---LTGE-------PI 48
G+ + I ++G+ SF+ ++ Q + P + IV+ L G
Sbjct: 126 LGIVIVFIVTLVGYFSFLFLSFLLSTFIYQYNFPRNNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R++RA E Q+ +K +SG + ++S+ ++ I + + E I + K+
Sbjct: 186 RLDRAIAFYEKQLAKKGKRATFIVSGGKGDNETISEAEAMRGYLISKGIEETFIIMENKS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
+NT N Q + + ++ + T+++H+ R L ++
Sbjct: 246 VNTLQNMQFSKKKMDAIMPEYNSLFS-TNNFHLFRASLYARKAG 288
>gi|229017000|ref|ZP_04173920.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
gi|229023181|ref|ZP_04179692.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228738106|gb|EEL88591.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228744271|gb|EEL94353.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
Length = 159
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L++ +SG +++ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHDKTIAIVSGGQGKGEDITEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++Q++AE I + ++ +T+ N + + +IVT+D+HM R
Sbjct: 65 QGLMKQNIAEDRIIMEDRSTSTDENIKFSKPLIPDK-MKKGMIVTNDFHMFRA 116
>gi|317506557|ref|ZP_07964352.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255154|gb|EFV14429.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 330
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + E+ + I ++G V++ + + Q + I + +T
Sbjct: 188 DRLRKTLEVAQADPAAPIVVTGGKPQNGVTEADAMADWLVGQGVDPGRIHKEDHSASTVQ 247
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQR 140
NA ++ H++IVT H+ R EL
Sbjct: 248 NALNSAEILRSLRPAHLVIVTSANHVRRASALFELAA 284
>gi|182438855|ref|YP_001826574.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178467371|dbj|BAG21891.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 286
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + ++G + V + ++ + + + I Y ++
Sbjct: 133 AHRLDAAAELYRTGKVKVVLVTGDNSRVEYDEPDAMRTYLTGRGVPDERIVSDYAGFDSW 192
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A ++V+ +H+ R + Y + + + +
Sbjct: 193 DSCVRAKKIF---GVDRAVLVSQGFHIHRAVTLCRSAGID----AYGVGVDEPRDATWY 244
>gi|271500869|ref|YP_003333894.1| hypothetical protein Dd586_2338 [Dickeya dadantii Ech586]
gi|270344424|gb|ACZ77189.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 252
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RIQGALNAFNSGKVSYLLLSGDNAQQSYNEPMTMRRDLIAAGVPPASIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDFT---IITQRFHCERAL--FIALHKGIQAQCFAVPSPK 173
>gi|291439794|ref|ZP_06579184.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291342689|gb|EFE69645.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 233
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 50/175 (28%), Gaps = 20/175 (11%)
Query: 2 RYFWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
R + C++ + ++ + D P VV R+
Sbjct: 20 RLTQAVMAACVLALLPATWLHLAADGRLRTTADVPRTEVAVVFGAGLWDGEPSPYLARRL 79
Query: 51 ERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A EL E + ++G + + ++ R + + I Y +T +
Sbjct: 80 DAAVELYRAGRIEVVLVTGDNSREEYDEPDAMRAYLTRHGVPDARIVSDYAGFDTWDSCV 139
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
A + ++++ +H+ R Y + D +
Sbjct: 140 RAK---KVFGVDRAVLISQGFHIRRAVALCGAAG----VSSYGVGVDDRHDLVWY 187
>gi|330859345|emb|CBX69691.1| protein sanA [Yersinia enterocolitica W22703]
Length = 265
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ + + I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLMAAGVPASDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|123443010|ref|YP_001006985.1| hypothetical protein YE2795 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089971|emb|CAL12828.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 267
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ + + I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLMAAGVPASDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|121999045|ref|YP_001003832.1| hypothetical protein Hhal_2266 [Halorhodospira halophila SL1]
gi|121590450|gb|ABM63030.1| protein of unknown function DUF218 [Halorhodospira halophila SL1]
Length = 268
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 26/183 (14%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIP 84
Q+ I + + R+ L + ++++G V +L ++
Sbjct: 98 PQLPITAQANADGV-------TRVLEGVRLQRHFPDSTLWLTGGAVRGDTPNSEVLYRLM 150
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
L ++ + NT AQ + + +++VT HMPR +
Sbjct: 151 GEVGLDAGAVERLAEPRNTAEEAQAVAERLTD-DAGTIILVTEASHMPRAMGLFR--GQE 207
Query: 145 VQFIPYP----IISHDLEE--------NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
++ IP P + +H+ + S+ + + + EYL + ++
Sbjct: 208 LEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHALHMTKRAFHEYLG--MAWGRMRGQIPA 265
Query: 193 ASQ 195
A
Sbjct: 266 AED 268
>gi|90414034|ref|ZP_01222018.1| hypothetical protein P3TCK_06857 [Photobacterium profundum 3TCK]
gi|90324956|gb|EAS41477.1| hypothetical protein P3TCK_06857 [Photobacterium profundum 3TCK]
Length = 217
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 19/135 (14%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQ 87
I VL +R+ E A +L I SG ++K I
Sbjct: 24 KSDCIFVLCSNDVRVAEHAAKLYLAGYAPYIVFSGGEGELTKGLFGCSEAEYFAHIAADM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFL--------- 136
+ I I ++ NT N Q E + +++V + RTF
Sbjct: 84 GVPLEKILIEPQSTNTGENVQFTRELLESKDLTPNKMILVQKPFMERRTFATVMRQWPGK 143
Query: 137 ELQRINSTVQFIPYP 151
E+ + + F YP
Sbjct: 144 EIIVTSPNITFDEYP 158
>gi|323163136|gb|EFZ48969.1| sanA [Escherichia coli E128010]
gi|323183035|gb|EFZ68433.1| sanA [Escherichia coli 1357]
Length = 207
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 53 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 112
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 113 VVRAKKVFGENHIT---IISQEFHNQRAI 138
>gi|319939407|ref|ZP_08013767.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
gi|319811393|gb|EFW07688.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
Length = 332
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 60/156 (38%), Gaps = 23/156 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
YG ++ + + I GF+ P I++L R+E+
Sbjct: 134 LLIYGSYLYVTYIIYGFVY-------NTFPVIKHPDYIIILGSGLIGDKVPPLLAQRLEK 186
Query: 53 AFELLEN-QIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ E KI +SG V +++ + + + + + I I ++ NT N Q
Sbjct: 187 GKTMYEKFHNHPKIVVSGGQGVDEPITEAEAMAQYLRQVCIPQEDIIIEQQSTNTLENLQ 246
Query: 109 EASAWAEKNNFHHVL--IVTHDYHMPRTFLELQRIN 142
+ ++ + + +VT+ +H R + ++++
Sbjct: 247 FSKTILDQKSKENYYCLVVTNSFHSLRAGIYMRKLG 282
>gi|319947862|ref|ZP_08022049.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
gi|319438468|gb|EFV93401.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
Length = 205
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 52/164 (31%), Gaps = 24/164 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIE 51
L +CL+ I GFI+F R I D AIVVL G R+E
Sbjct: 8 VLTIALLLCLV--IPGFIAF-RVWHVARIDDRTPADAIVVL-GAAQYNGVPTPVFQARLE 63
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDILL------QKIPIRQDLAECCIDIGYKALNTEG 105
A L + + +I G L + R + + NTEG
Sbjct: 64 HAALLHDEGVAPQIITVG---GGQPGDLYTEAGSGRAYLTRLGVPPEAVLAVETGTNTEG 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ + V++V+ H R+ + + P
Sbjct: 121 SLDAVAQTVRDQGGQSVVLVSDPTHSYRSRMMARDAGLDAWTSP 164
>gi|260438932|ref|ZP_05792748.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
gi|292808583|gb|EFF67788.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
Length = 258
Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+++AFE +E + +SG VS+ + +++ + + + + K+ +T
Sbjct: 124 RLDKAFEYIEKNDNTILVLSGGQGNGEDVSEAQAMYDYLVQKGVDKSRLLLEDKSTSTVE 183
Query: 106 NAQEASAWAEKNNFHHVLIV---THDYHMPRTFLELQRINSTVQFIP 149
N + + EKN+ + + V T+++H+ R L + + ++ IP
Sbjct: 184 NIEYSMKIIEKNSQNATVEVGFITNNFHVFRAELVCRNMGYDIKGIP 230
>gi|256787907|ref|ZP_05526338.1| integral membrane protein [Streptomyces lividans TK24]
Length = 207
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 17/148 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
MR G + L+ ++ + + + D P VV R+
Sbjct: 1 MRVVVAGCVLALL--PSAWLRVVTDDRLRTVADVPRTEVAVVFGAGLWDGEPSPYLAHRL 58
Query: 51 ERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A EL + ++G + + ++ +R + + I Y +T +
Sbjct: 59 DAAAELYRAGRIAVVLVTGDNSREEYDEPDAMRAYLVRHGVPDGRIVSDYAGFDTWDSCV 118
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A ++++ +H+ R
Sbjct: 119 RAKKIF---GVDRAVLISQGFHIRRAVA 143
>gi|115374286|ref|ZP_01461571.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
gi|115368707|gb|EAU67657.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
Length = 212
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 16/155 (10%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L + + +SG + D +++ + + L E + L+T
Sbjct: 70 AQRLDTAIALWREKKVGGVLVSGDNSDRFHDETRAMRRYLLERGLPETAVQGDNSGLSTY 129
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A L+VT +H+PR I + +
Sbjct: 130 DSCVRAYD---VFGMRRALLVTQRFHLPRALY-----------IANSVGMDAWGVAADEG 175
Query: 165 KIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
R +L E +L I + L + AS +
Sbjct: 176 HPSTQRYVLRETFSRVLALIMVLLDLKPASSAPAS 210
>gi|332161106|ref|YP_004297683.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665336|gb|ADZ41980.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 251
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ + + I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLMAAGVPASDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|289706576|ref|ZP_06502926.1| conserved hypothetical protein [Micrococcus luteus SK58]
gi|289556711|gb|EFD50052.1| conserved hypothetical protein [Micrococcus luteus SK58]
Length = 243
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 SFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILL 80
V H D P V A++VL +P + A EL + + +++F+S + L
Sbjct: 39 WATHAVTDPHPDDAPRVDALLVLYSQPRVYDAAIELAASGVTDRLFVS-AYLGPDGHEKL 97
Query: 81 QKIPIRQDLAECCIDIGYKA---LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
P +D + + A + T+G A+ + + HH+ ++T H+ R L
Sbjct: 98 CGGPEERDPRLAGVTVECFAPDPVTTQGEVIHAADRMRELDLHHLGVLTFHQHVERARL 156
>gi|218701857|ref|YP_002409486.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300916707|ref|ZP_07133423.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|218371843|emb|CAR19698.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300416002|gb|EFJ99312.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 227
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|254360531|ref|ZP_04976680.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
gi|153091071|gb|EDN73076.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
Length = 715
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ E KI +SG V + ++ +++K I + E + + A +T G
Sbjct: 226 QRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLLDDVARDTPG 285
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
NA + ++ VL + H+PR L+ ++
Sbjct: 286 NAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSI 325
>gi|188533436|ref|YP_001907233.1| hypothetical protein ETA_12940 [Erwinia tasmaniensis Et1/99]
gi|188028478|emb|CAO96340.1| Vancomycin resistance protein [Erwinia tasmaniensis Et1/99]
Length = 236
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A + + +SG + S + +++ I + I + Y T +
Sbjct: 68 RMQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRRDLIAAGVEPSDIVLDYAGFRTLDS 127
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R L ++ +Q Y + S
Sbjct: 128 IVRTRKVFDTNDF---IIITQRFHCERAL--LIALHMGIQAQCYAVPSPK 172
>gi|309793653|ref|ZP_07688079.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308122610|gb|EFO59872.1| conserved hypothetical protein [Escherichia coli MS 145-7]
Length = 227
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|218706710|ref|YP_002414229.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|293406697|ref|ZP_06650623.1| SanA protein [Escherichia coli FVEC1412]
gi|298382440|ref|ZP_06992037.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300901472|ref|ZP_07119555.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|218433807|emb|CAR14724.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|291426703|gb|EFE99735.1| SanA protein [Escherichia coli FVEC1412]
gi|298277580|gb|EFI19096.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300355110|gb|EFJ70980.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 227
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|191166833|ref|ZP_03028658.1| putative SanA protein [Escherichia coli B7A]
gi|193062133|ref|ZP_03043229.1| putative SanA protein [Escherichia coli E22]
gi|194427757|ref|ZP_03060304.1| putative SanA protein [Escherichia coli B171]
gi|209920557|ref|YP_002294641.1| hypothetical protein ECSE_3366 [Escherichia coli SE11]
gi|218696790|ref|YP_002404457.1| putative thioredoxin-like [Escherichia coli 55989]
gi|260845898|ref|YP_003223676.1| putative thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|190903075|gb|EDV62799.1| putative SanA protein [Escherichia coli B7A]
gi|192932353|gb|EDV84951.1| putative SanA protein [Escherichia coli E22]
gi|194414265|gb|EDX30540.1| putative SanA protein [Escherichia coli B171]
gi|209913816|dbj|BAG78890.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218353522|emb|CAU99654.1| putative thioredoxin-like [Escherichia coli 55989]
gi|257761045|dbj|BAI32542.1| predicted thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|323946845|gb|EGB42863.1| hypothetical protein EREG_01643 [Escherichia coli H120]
gi|324018193|gb|EGB87412.1| hypothetical protein HMPREF9542_03119 [Escherichia coli MS 117-3]
gi|324119692|gb|EGC13573.1| hypothetical protein ERBG_00478 [Escherichia coli E1167]
Length = 227
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|170018663|ref|YP_001723617.1| hypothetical protein EcolC_0614 [Escherichia coli ATCC 8739]
gi|169753591|gb|ACA76290.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
Length = 227
Score = 43.3 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALITKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|229132528|ref|ZP_04261378.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
gi|228650965|gb|EEL06950.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
Length = 159
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +++ + ++
Sbjct: 7 ADYIIVL--GSKVNGTQPSYSLQYRIDKAAEYLKLHDKTIAIVSGGQGKGEDITEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++Q++AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 QGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPAN-MKKGMIVTNDFHMFRA 116
>gi|229011030|ref|ZP_04168224.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
gi|229166553|ref|ZP_04294306.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228616957|gb|EEK74029.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228750202|gb|EEM00034.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
Length = 159
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +++ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKLHDKTIAIVSGGQGKGEDITEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++Q++AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 QGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPAN-MKKGMIVTNDFHMFRA 116
>gi|218897246|ref|YP_002445657.1| hypothetical protein BCG9842_B3064 [Bacillus cereus G9842]
gi|228939435|ref|ZP_04102023.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228965253|ref|ZP_04126347.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228972289|ref|ZP_04132901.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978903|ref|ZP_04139269.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|218541132|gb|ACK93526.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228780777|gb|EEM28989.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|228787434|gb|EEM35401.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228794487|gb|EEM41999.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228820135|gb|EEM66172.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 178
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 49 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 108
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 109 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 136
>gi|331664700|ref|ZP_08365605.1| conserved hypothetical protein [Escherichia coli TA143]
gi|331057948|gb|EGI29930.1| conserved hypothetical protein [Escherichia coli TA143]
Length = 227
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|259908912|ref|YP_002649268.1| hypothetical protein EpC_22650 [Erwinia pyrifoliae Ep1/96]
gi|224964534|emb|CAX56044.1| conserved uncharacterized protein YcbC [Erwinia pyrifoliae Ep1/96]
gi|283478907|emb|CAY74823.1| Uncharacterized protein ycbC [Erwinia pyrifoliae DSM 12163]
Length = 262
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 27/140 (19%)
Query: 38 SAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---HHSVSKD 77
IVVL G R+ + K+ +G H+ +S
Sbjct: 80 DYIVVLGGGYTWNPQWAPSSNMLNNSLPRLAEGIRIWRANPQAKLIFTGSKAQHNPMSSA 139
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L + + I I K +TE A E + F +VT H+PR
Sbjct: 140 ALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHNQPF---ALVTSANHLPRAIRF 196
Query: 138 LQRINSTVQFIPYPIISHDL 157
Q P+P ++ L
Sbjct: 197 FQYEG----LQPWPAPANQL 212
>gi|317048843|ref|YP_004116491.1| hypothetical protein Pat9b_2635 [Pantoea sp. At-9b]
gi|316950460|gb|ADU69935.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 239
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHLGIQAQCYAVPSPK 173
>gi|120599528|ref|YP_964102.1| hypothetical protein Sputw3181_2731 [Shewanella sp. W3-18-1]
gi|120559621|gb|ABM25548.1| protein of unknown function DUF218 [Shewanella sp. W3-18-1]
Length = 231
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L + +SG +S ++ K + + + I A +T
Sbjct: 92 RLSEGIRQLGLGQDCILIVSGWGGELTQISHAEMMAKAAVELGVDKIKIIQFPLARDTLE 151
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-DLEENSSIF 164
AQ W + +VT HMPR + + ++
Sbjct: 152 EAQYL-KW--ELGDSSFRLVTSASHMPRAMAIFT----GKGLLASAAPTDFRARDDFWWR 204
Query: 165 ----KIKILRVLLIEYLKILLLSIQ 185
+ + + EY+ L L I+
Sbjct: 205 LTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|218555654|ref|YP_002388567.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|256018999|ref|ZP_05432864.1| putative thioredoxin-like protein [Shigella sp. D9]
gi|260869837|ref|YP_003236239.1| putative thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|293449423|ref|ZP_06663844.1| ygjQ protein [Escherichia coli B088]
gi|300818854|ref|ZP_07099060.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300821683|ref|ZP_07101829.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300905768|ref|ZP_07123502.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|301301868|ref|ZP_07208002.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|307310291|ref|ZP_07589939.1| protein of unknown function DUF218 [Escherichia coli W]
gi|331669890|ref|ZP_08370735.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331679161|ref|ZP_08379833.1| conserved hypothetical protein [Escherichia coli H591]
gi|332280096|ref|ZP_08392509.1| conserved hypothetical protein [Shigella sp. D9]
gi|218362422|emb|CAR00046.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|257766193|dbj|BAI37688.1| predicted thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|291322513|gb|EFE61942.1| ygjQ protein [Escherichia coli B088]
gi|300402367|gb|EFJ85905.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|300525821|gb|EFK46890.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300528639|gb|EFK49701.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842849|gb|EFK70609.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|306909186|gb|EFN39681.1| protein of unknown function DUF218 [Escherichia coli W]
gi|315062392|gb|ADT76719.1| predicted thioredoxin-like [Escherichia coli W]
gi|315257002|gb|EFU36970.1| SanA protein [Escherichia coli MS 85-1]
gi|323377020|gb|ADX49288.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|331062803|gb|EGI34717.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331073226|gb|EGI44549.1| conserved hypothetical protein [Escherichia coli H591]
gi|332102448|gb|EGJ05794.1| conserved hypothetical protein [Shigella sp. D9]
Length = 227
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|326939983|gb|AEA15879.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 185
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 56 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 143
>gi|320174524|gb|EFW49660.1| SanA protein [Shigella dysenteriae CDC 74-1112]
Length = 191
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + ++ +QK I + + I Y +T +
Sbjct: 37 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEESGMQKALIAKGVPAKVIFCDYAGFSTLDS 96
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 97 VVRAKKVFGENHIT---IISQEFHNQRAI 122
>gi|302560203|ref|ZP_07312545.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302477821|gb|EFL40914.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 221
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 17/157 (10%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKD-------ILLQKIPIRQDLAECCIDIGYKALNT 103
+ +L + I +G ++D ++ + + I + +A NT
Sbjct: 41 DTTADLYHRGMTPLIVFTGATSRTTRDRMPRGEAEHYRERAMELGVPADAILVEPRARNT 100
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
N + + A E VL+V+ Y R + +++ V+++ S +
Sbjct: 101 GENIRFSRALLEDYGAVVSSVLLVSKPYEERRAYATARKLWPEVEWVS---ASTPMTLAD 157
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
I I R+++ +L Q L F I
Sbjct: 158 YIDSIGDARLVID-----MLAGAQQRLMIYPQQGFMI 189
>gi|149194221|ref|ZP_01871318.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
gi|149135396|gb|EDM23875.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
Length = 242
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 29/185 (15%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI-------------RIERAFELLENQIGEKIFISGVHH 72
++ D+ + SA+VVL G R L + +F G
Sbjct: 60 LENFKHKDNITPSAVVVLGGGSNPKDTIKAFPDAFKREVYGLILAKTYNIPFVFSGGGIG 119
Query: 73 SVSKDILLQKIPIRQDLAECCIDI------GYKALNTEGNAQEASAWAEKNNFH-HVLIV 125
+S+ L D+ K+LNT N + +K ++ +V
Sbjct: 120 KISEAE---NTKHDVQLLTKTFDVNITTYFEDKSLNTIQNGMYTALLFKKLKLPKNIYLV 176
Query: 126 THDYHMPRTF-----LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
T+ YHM R++ + I V F PI S + + + + EY +L
Sbjct: 177 TNAYHMKRSYKIFKFFGFKIITKPVGFYSKPIESI-WDYFPKMNSLNASYKAIHEYFGLL 235
Query: 181 LLSIQ 185
L I+
Sbjct: 236 SLKIK 240
>gi|116490285|ref|YP_809829.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290889671|ref|ZP_06552760.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
gi|116091010|gb|ABJ56164.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290480668|gb|EFD89303.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
Length = 365
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++R + + K+ +SG +S+ ++ I+ + + + + ++ NT
Sbjct: 205 ESRLQRTLDFAKRHHNPKLIMSGGQGYDEKISEAKAMRTWIIKHNYSPSKVILEDRSTNT 264
Query: 104 EGNAQEASAWA----EKNNFH---HVLIVTHDYHMPRT 134
+ N Q+++ + NN ++ VT+ YH+ R
Sbjct: 265 KENFQKSAEKILEDQKTNNLGKQIRMVFVTNSYHLTRA 302
>gi|331684739|ref|ZP_08385331.1| conserved hypothetical protein [Escherichia coli H299]
gi|320195248|gb|EFW69877.1| SanA protein [Escherichia coli WV_060327]
gi|331078354|gb|EGI49560.1| conserved hypothetical protein [Escherichia coli H299]
Length = 227
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|196045100|ref|ZP_03112333.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225863573|ref|YP_002748951.1| hypothetical protein BCA_1675 [Bacillus cereus 03BB102]
gi|196024102|gb|EDX62776.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225789948|gb|ACO30165.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 178
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLE 58
+ +GF+ + Y K + I+VL RI++A E L+
Sbjct: 1 MVCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLK 57
Query: 59 NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 58 SHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIP 117
Query: 116 KNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 118 DN-MKKGMIVTNDFHMFRA 135
>gi|167623456|ref|YP_001673750.1| hypothetical protein Shal_1525 [Shewanella halifaxensis HAW-EB4]
gi|167353478|gb|ABZ76091.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 253
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 27/151 (17%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL------- 101
R+ L K+ +SG +S + + +++G A
Sbjct: 105 RLTEGVRQLSLGKSCKLVVSGWSGGLSSRSHADMM------FDAAVELGVSAQSIIKFPL 158
Query: 102 --NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+T AQ F +VT HMPR + + +
Sbjct: 159 PKDTIEEAQFMEWEVADAPFR---LVTSASHMPRAMAIFS----NAKLNAIAAPTDFAQR 211
Query: 160 NSSIFKIKILRVL-----LIEYLKILLLSIQ 185
S ++ +L + EY+ +L ++
Sbjct: 212 ASYWWRFDAQSLLNSQRAIHEYMGLLWFKLK 242
>gi|310767187|gb|ADP12137.1| hypothetical protein EJP617_24560 [Erwinia sp. Ejp617]
Length = 262
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 27/140 (19%)
Query: 38 SAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV---HHSVSKD 77
IVVL G R+ + K+ +G H+ +S
Sbjct: 80 DYIVVLGGGYTWNPQWAPSSNMLNNSLPRLAEGIRIWRANPQAKLIFTGSKAQHNPMSSA 139
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L + + I I K +TE A E + F +VT H+PR
Sbjct: 140 ALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHNQPF---ALVTSANHLPRAIRF 196
Query: 138 LQRINSTVQFIPYPIISHDL 157
Q P+P ++ L
Sbjct: 197 FQYEG----LQPWPAPANQL 212
>gi|261492343|ref|ZP_05988905.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496129|ref|ZP_05992537.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308231|gb|EEY09526.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312026|gb|EEY13167.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 715
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E+ E+ KI +SG V + ++ +++K I + E + + A +T G
Sbjct: 226 QRLEKTKEMAAKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLLDDVARDTPG 285
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
NA + ++ VL + H+PR L+ ++
Sbjct: 286 NAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSI 325
>gi|320184632|gb|EFW59429.1| SanA protein [Shigella flexneri CDC 796-83]
gi|332091879|gb|EGI96957.1| hypothetical protein SB359474_3411 [Shigella boydii 3594-74]
Length = 203
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +QK I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQKALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|257085374|ref|ZP_05579735.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993404|gb|EEU80706.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 359
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 138 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 197
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 198 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 254
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 255 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 303
>gi|186477759|ref|YP_001859229.1| hypothetical protein Bphy_3013 [Burkholderia phymatum STM815]
gi|184194218|gb|ACC72183.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 198
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 17/115 (14%)
Query: 38 SAIVVLT------GE-----PIRIERAFELLENQIGEKIFISG----VHHSVSKDILLQK 82
A++VL G R++ E +E + + G + +++
Sbjct: 13 DAVIVLANLMDAEGNLNDETRARVDLGIEAIETGRAPTLVMCGWAYREDSDICIADAMRR 72
Query: 83 IPIRQD-LAECCIDIGYKALNTEGNAQEAS-AWAEKNNFHHVLIVTHDYHMPRTF 135
+ Q + + + +T G+A A +L+ T YH RT
Sbjct: 73 YAVEQRNVDASRVIAETTSRDTVGDAVFTRSNLAATFGGSRILVATSRYHAARTL 127
>gi|238788869|ref|ZP_04632660.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
gi|238723174|gb|EEQ14823.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
Length = 245
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 12/120 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGAINAYNSGKVSYLLLSGDNALQSYNEPMTMRRDLIAAGVAPSDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
Y T + + N+F +I+T +H R ++ +Q + + S
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|260776084|ref|ZP_05884979.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607307|gb|EEX33572.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 211
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L +N + +SG H S ++ +++ ++ ++ E I + Y T
Sbjct: 46 NRINAAIDLYQNDKVDNFLLSGDNAHRSYNEPWTMKRDLLKAEVPENHIYLDYAGFRTLD 105
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 106 SIVRAKEIFDTDNF---LIITQKFHCERALF 133
>gi|238793455|ref|ZP_04637080.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
gi|238727228|gb|EEQ18757.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
Length = 253
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 12/120 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGAINAYNSGKVSYLLLSGDNALQSYNEPMTMRRDLIAAGVAPADIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
Y T + + N+F +I+T +H R ++ +Q + + S
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|257061632|ref|YP_003139520.1| hypothetical protein Cyan8802_3881 [Cyanothece sp. PCC 8802]
gi|256591798|gb|ACV02685.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 232
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKD 77
I F ++ I V I+VL G R A +L I IS +
Sbjct: 35 ILFWNVTVKLPINSTKPVDGILVLGGSVTREIYAAQLRHQLPEIPIIISQGSEDPCILLI 94
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ P+++ E C A +T N + + H V ++T D H+PR
Sbjct: 95 FQRYQAPLQRVWLENC------ANSTFENFFFSVPLLRRLRVHKVKLITSDSHLPRAKW- 147
Query: 138 LQRINSTVQFIPYPIIS 154
+ +I+ VQ I +++
Sbjct: 148 MAQIHLGVQGIALQVVT 164
>gi|114048174|ref|YP_738724.1| hypothetical protein Shewmr7_2682 [Shewanella sp. MR-7]
gi|113889616|gb|ABI43667.1| protein of unknown function DUF218 [Shewanella sp. MR-7]
Length = 244
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 16/163 (9%)
Query: 32 PDHPSVSAI-----VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS---KDILLQKI 83
D P +A+ V LT R+ L+ + +SG ++ ++ K
Sbjct: 87 ADIPGATAVQSLSTVALT----RLTEGLRQLQLGQDCTLVVSGWEGELTQHPHAEVMAKA 142
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
I + I +T A + E V +VT HMPR+
Sbjct: 143 AIELGVDASRIVQLPLPRDTIEEAHY---FKEHFGNQAVRLVTSASHMPRSMAIFSGQGL 199
Query: 144 TVQFIPYPIISHD-LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
P + D + + + + EY+ L L I+
Sbjct: 200 AASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWIK 242
>gi|254381969|ref|ZP_04997332.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340877|gb|EDX21843.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 338
Score = 43.3 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 27/170 (15%)
Query: 8 LFVCLIFFIMG----FISFIRYVKQM-HIPDHPSVSAIVVL----TGE-------PIRIE 51
L VCL+ F+ F+ Y I +V +VVL TG R+E
Sbjct: 127 LVVCLVLLAGYVSFLFVCFLAYACLYGRITVRGNVDYVVVLGSGLTGGEDVPPLLASRLE 186
Query: 52 RA-----FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+ +L + SG +V + + I + +A + + ++ T
Sbjct: 187 KGHRIHTAQLARGGPAPLLLASGGQGPGEAVPEARAMADWLIARGVAREHVRLEDRSRTT 246
Query: 104 EGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
E N + + + + V +VT+ +H R + +R Q + P
Sbjct: 247 EENLRFSRELMAEENPGYRCV-VVTNSFHAFRAAMTARRAGVNGQVLGSP 295
>gi|23100336|ref|NP_693803.1| hypothetical protein OB2881 [Oceanobacillus iheyensis HTE831]
gi|22778568|dbj|BAC14837.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 436
Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E A E + ++G ++ + + L+E I + ++ NT
Sbjct: 123 GRLEVALNSAEKYPNAYVLVTGGVEKNGWTEGDRMHDWLVDHGLSEDRIIVENESSNTVE 182
Query: 106 NAQEASAWAEKN--NFHHVLIVTHDYHMPRT 134
NA + + ++T YH+ R+
Sbjct: 183 NASNSFEILYNQYEDIDSFSMITSQYHLKRS 213
>gi|228958546|ref|ZP_04120266.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801173|gb|EEM48070.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 162
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVAVEYLFSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 93 YENLKFSMDL---YNVKHAVVVSNTYHLYRT 120
>gi|119469525|ref|ZP_01612429.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
gi|119447060|gb|EAW28330.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
Length = 258
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 49 RIERAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
R+ +L + ++ +SG + +++ L+ + I + + + KA++T A
Sbjct: 111 RLVEGVKLAKYYPKSQLIVSGGGYENITNSSLMYQTAIELGINKNRLLQNPKAMDT---A 167
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI- 166
QEA+ A K V +VT HMPR + V IP H+ ++
Sbjct: 168 QEAALLAPKLVDFKVALVTSVLHMPRAQDLF--LAQGVITIPAATDFHNFSALPFHKQLV 225
Query: 167 --KILRVLLIEYLKILL--LSIQLSLSTQTA 193
+ + +Y ++ I++
Sbjct: 226 PNAQALLAVTQYSHEVVGTTWIKVRRWLDPE 256
>gi|227515109|ref|ZP_03945158.1| membrane protein [Lactobacillus fermentum ATCC 14931]
gi|227086441|gb|EEI21753.1| membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L + ++ +SG + + + + ++ + + I + + NT
Sbjct: 166 RLLGGLALYQRFPKAELIMSGGQGDDEPEPEAVAMHRFARQKGVPKSAIRLETNSTNTAT 225
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N EA + N+ V++VT DYH+ R+ L +R
Sbjct: 226 NLSEAKRFI--NSGDRVVLVTSDYHLLRSLLYARR 258
>gi|257482212|ref|ZP_05636253.1| hypothetical protein PsyrptA_03022 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 141
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 9/90 (10%)
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI----ISH 155
+ T NA +A + V++VT +HM R ++ + P+ + +
Sbjct: 46 SRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEKA--GFTVVSAPVGFLGVDN 103
Query: 156 DLEENSSIFKIK---ILRVLLIEYLKILLL 182
+ + + VLL E +L+
Sbjct: 104 ARPFGGWLPESRVFTQSGVLLNEAAGLLVY 133
>gi|325266352|ref|ZP_08133030.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
gi|324982145|gb|EGC17779.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
Length = 216
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 32/220 (14%)
Query: 3 YFWYGLFV-CLIFFIMGFISFIRYVKQMHIPDHP-----SVSAIVV-----LTGEPI--- 48
YFW C + + G ++ V ++ DH +A+++ L
Sbjct: 9 YFWAAAVAGCFLAALYGIRAYTARVAAPYLSDHTAELPERKAALLLGTSPKLADGRSNTY 68
Query: 49 ---RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI A +L I +SG + ++ ++ + Q + I Y + T
Sbjct: 69 FHLRIRAAADLYRAGKVRYIIVSGDNRKHGYNEPEAMKAALVAQGIPAEKIVPDYAGIRT 128
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A + ++V+ +H R L R + Y + +
Sbjct: 129 LDSVLRARSIF---GQDSYIVVSQKFHNERAVY-LARA-HGIDAYGY--------NAADV 175
Query: 164 FKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEE 203
+ + + EYL + + + L++ Q + E
Sbjct: 176 DRYSGFKTEVREYLARVKMLLDLAVQKAPRHQGEPVRLPE 215
>gi|318081213|ref|ZP_07988545.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 353
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 11/129 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L + ++G + S D ++ R + + Y +T
Sbjct: 47 AHRLDAAARLYAAGRVTAVLVTGDNSRTSYDEPTAMRDYLARAGVPRRQVVRDYAGFDTW 106
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ A ++V+ +H+ R + Q + + D + +
Sbjct: 107 DSCVRAH---RVFGVDRAVLVSQGFHIRRAVALCRAAGIDAQ----GVAARDPHDVTWY- 158
Query: 165 KIKILRVLL 173
+R LL
Sbjct: 159 -YGAIRELL 166
>gi|254877103|ref|ZP_05249813.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843124|gb|EET21538.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 231
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIR------YVKQMHIPDHPSVSAIVVLTGEPIRIERAF 54
+RYF + V +I++++G ++ I + AI++L I +AF
Sbjct: 26 LRYF--VIIVTIIYYLVGNGLIANILAKPIRLESTDIKQCANTKAIILL--GAG-INQAF 80
Query: 55 ELLE----------------NQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCID 95
+ LE NQ + I ISG S +S+ + I + + + I
Sbjct: 81 DKLEPSLSAYDRILKTAEVYNQYPQDIIISGGSPSGYKLSEAEVYADILYKLGIPKSKIR 140
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++ NT NAQ +N + ++T H R L N I ++
Sbjct: 141 LEKQSKNTYENAQFTKKILSDHN-NTYCLITGGIHYQRAKLIFDSFNINTINIASSKLAP 199
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++ S + I + ++ EYL I+ + +
Sbjct: 200 EISFLPSAYSFYITQAIIHEYLGIIKFYLSV 230
>gi|241668569|ref|ZP_04756147.1| hypothetical protein FphipA2_07371 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIR------YVKQMHIPDHPSVSAIVVLTGEPIRIERAF 54
+RYF + V +I++++G ++ I + AI++L I +AF
Sbjct: 34 LRYF--VIIVTIIYYLVGNGLIANILAKPIRLESTDIKQCANTKAIILL--GAG-INQAF 88
Query: 55 ELLE----------------NQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCID 95
+ LE NQ + I ISG S +S+ + I + + + I
Sbjct: 89 DKLEPSLSAYDRILKTAEVYNQYPQDIIISGGSPSGYKLSEAEVYADILYKLGIPKSKIR 148
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++ NT NAQ +N + ++T H R L N I ++
Sbjct: 149 LEKQSKNTYENAQFTKKILSDHN-NTYCLITGGIHYQRAKLIFDSFNINTINIASSKLAP 207
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++ S + I + ++ EYL I+ + +
Sbjct: 208 EISFLPSAYSFYITQAIIHEYLGIIKFYLSV 238
>gi|293412464|ref|ZP_06655187.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469235|gb|EFF11726.1| conserved hypothetical protein [Escherichia coli B354]
Length = 230
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|292488756|ref|YP_003531643.1| protein SanA [Erwinia amylovora CFBP1430]
gi|292899909|ref|YP_003539278.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291199757|emb|CBJ46878.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291554190|emb|CBA21424.1| Protein sanA [Erwinia amylovora CFBP1430]
Length = 237
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RMQGALNAYNSGKVNYLLLSGDNARQSYNEPMTMRRDLIAAGVDPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R L ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--LIALHMGIQAQCYAVPSPK 173
>gi|222095337|ref|YP_002529397.1| hypothetical protein BCQ_1677 [Bacillus cereus Q1]
gi|221239395|gb|ACM12105.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 172
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
MGF+ + Y K H+ I+VL RI++A E L+
Sbjct: 1 MGFLQYNIY-KHGHMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKAHEKAI 57
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + ++ ++ +AE I + K+ +T+ N + + N
Sbjct: 58 AIVSGGKGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKK 116
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 117 GMIVTNDFHMFRA 129
>gi|331698228|ref|YP_004334467.1| hypothetical protein Psed_4458 [Pseudonocardia dioxanivorans
CB1190]
gi|326952917|gb|AEA26614.1| protein of unknown function DUF218 [Pseudonocardia dioxanivorans
CB1190]
Length = 205
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-----TGEPI-----RI 50
+R G+ V +I + R + A++VL G P R+
Sbjct: 5 LRIVLGGVLVAVIIVVGTAF---RVWETARTDHDTPADAVIVLGAAQYDGNPSPIFAARL 61
Query: 51 ERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + +I G + ++ ++ + + + + + +T +
Sbjct: 62 DHAAALYRQGLAPRIVTVGGNRAGDEYTEASAGRRYLLAKGVPAAAVVAVGEGSDTLASL 121
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRT 134
Q +A A +H ++V+ +H R
Sbjct: 122 QAVAAVARTGGWHTAILVSDPWHSLRA 148
>gi|315659410|ref|ZP_07912273.1| membrane protein [Staphylococcus lugdunensis M23590]
gi|315495529|gb|EFU83861.1| membrane protein [Staphylococcus lugdunensis M23590]
Length = 334
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 47 PIRIERAFELLENQIGEK--IFISGV--HHSVSKDIL-LQKIPIRQDLAECCIDIGYKAL 101
RI+ E+ + Q ++ +SG + + + +++ + + + E I ++
Sbjct: 179 ASRIDAGLEIYQKQNNKQHLFLVSGGQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSK 238
Query: 102 NTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFL 136
T N + E + ++LI T+D+H+ R
Sbjct: 239 TTYENLYFSKEMIENLPLNKPNILICTNDFHILRAMF 275
>gi|218248566|ref|YP_002373937.1| hypothetical protein PCC8801_3831 [Cyanothece sp. PCC 8801]
gi|218169044|gb|ACK67781.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 232
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKD 77
I F ++ I V I+VL G R A +L I IS +
Sbjct: 35 ILFWNVTVKLPINSTKPVDGILVLGGSVTREIYAAQLRHQLPEIPIIISQGSEDPCIFLI 94
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ P+++ E C A +T N + + H V ++T D H+PR
Sbjct: 95 FQRYQAPLQRVWLENC------ANSTFENFFFSVPLLRRLRVHKVKLITSDSHLPRAKW- 147
Query: 138 LQRINSTVQFIPYPIIS 154
+ +I+ VQ I +++
Sbjct: 148 MAQIHLGVQGIALQVVT 164
>gi|113477800|ref|YP_723861.1| hypothetical protein Tery_4400 [Trichodesmium erythraeum IMS101]
gi|110168848|gb|ABG53388.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 273
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 25/139 (17%)
Query: 36 SVSAIVVL-----------------TGEPIRIERAFELLENQIGEKIFIS-----GVHHS 73
AIV+L T RI A EL + + I +S G +
Sbjct: 83 KADAIVLLGQGTTQPIVPDRIQIQLTKTAERITYAAELYKKGLAPYIIVSAGPRIGEDIN 142
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMP 132
+ + ++ + ++ I I + +A E + V++V+ +
Sbjct: 143 TIEAEDITRVLVLLNVPRTAIIIEPHSSTVYESAIETREILNERGLDPTVILVSSAIQIR 202
Query: 133 RTFLELQRINSTVQFIPYP 151
R L I ++ IP P
Sbjct: 203 RASLTFTDI--GMKVIPAP 219
>gi|25027170|ref|NP_737224.1| hypothetical protein CE0614 [Corynebacterium efficiens YS-314]
gi|259506695|ref|ZP_05749597.1| secreted protein [Corynebacterium efficiens YS-314]
gi|23492451|dbj|BAC17424.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165713|gb|EEW50267.1| secreted protein [Corynebacterium efficiens YS-314]
Length = 199
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 13/147 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEP-IRIERAFELL 57
+R + + IMGF +F+ + ++ P+ S A +VV+ G R E E+
Sbjct: 19 IRAALVMVVSLTMAAIMGFTAFMFW--TVYPPNERSEDADVVVVIAGASDGRHELGAEIA 76
Query: 58 ENQIGEKIFISGVHHSVSKDILL----QKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ +S + + SKD + + C+D Y + T G A+
Sbjct: 77 LEYGIKNFVVS--NPAGSKDKVGYSHCAGDDRPEGTRTWCMD-PYPVI-TSGEARTFHEL 132
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQR 140
A++ N+ ++VT H R ++
Sbjct: 133 AKEQNWESAIMVTSRPHTRRVKYFFEQ 159
>gi|300931974|ref|ZP_07147271.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300460397|gb|EFK23890.1| conserved hypothetical protein [Escherichia coli MS 187-1]
Length = 230
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKSVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|260596262|ref|YP_003208833.1| hypothetical protein CTU_04700 [Cronobacter turicensis z3032]
gi|260215439|emb|CBA27523.1| Uncharacterized protein ygjQ [Cronobacter turicensis z3032]
Length = 202
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RIE A L + +SG + D + + R + I Y +T +
Sbjct: 44 RIEAAAALYHAGKVSWLLVSGDNSRADYDEPTAMAEALNRHGVPAAAIFCDYAGFSTLDS 103
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A ++N I++ +H R
Sbjct: 104 VVRARQVFQENRIT---IISQAFHNQRAIY 130
>gi|59713268|ref|YP_206043.1| transporter [Vibrio fischeri ES114]
gi|59481516|gb|AAW87155.1| transporter [Vibrio fischeri ES114]
Length = 364
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ ++ + I ++G K L+ ++ + I A +T
Sbjct: 213 DRLNATLDMAKKNPNSYIVVTGGVPKNHKTEGKLMTDWLVKNGIDASRIIEDNYARSTVE 272
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S ++N H I++ H+ R E+
Sbjct: 273 NALYSSYALARHNIDHATIISSASHVRRGQALFEVA 308
>gi|194439812|ref|ZP_03071878.1| putative SanA protein [Escherichia coli 101-1]
gi|194421260|gb|EDX37281.1| putative SanA protein [Escherichia coli 101-1]
gi|323961045|gb|EGB56661.1| hypothetical protein ERGG_02513 [Escherichia coli H489]
gi|323970147|gb|EGB65420.1| hypothetical protein ERHG_03763 [Escherichia coli TA007]
Length = 230
Score = 42.9 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKSVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|260174422|ref|ZP_05760834.1| putative protein involved in barrier function of the cell envelope
[Bacteroides sp. D2]
gi|315922690|ref|ZP_07918930.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696565|gb|EFS33400.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 211
Score = 42.9 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI EL + + I ISG + ++ ++K +++ + E I + Y T +
Sbjct: 69 RILATVELYKAGKIKYILISGDNRKEDYNEPEEMKKALMQKGIPEKSIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A +N+ I++ +H R
Sbjct: 129 VVRAKEVFGQNHLT---IISQRFHNERAIY 155
>gi|27367521|ref|NP_763048.1| hypothetical protein VV2_1137 [Vibrio vulnificus CMCP6]
gi|27359093|gb|AAO08038.1|AE016812_20 Uncharacterized conserved protein [Vibrio vulnificus CMCP6]
Length = 361
Score = 42.9 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 20/134 (14%)
Query: 38 SAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIP 84
AIV L G R+E + + I ++G K L+
Sbjct: 189 DAIVTLGYALNPDGSMHDILIERLETTLTMAKANPEALIILTGGVPQNHKTEGKLMADWL 248
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---Q 139
I + ++ I A +T NA ++ ++ H I++ H+ R T E+ Q
Sbjct: 249 IERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFEIATWQ 308
Query: 140 RINSTVQF--IPYP 151
+ F + YP
Sbjct: 309 TGPRNITFDTVAYP 322
>gi|332752765|gb|EGJ83150.1| hypothetical protein SFK671_3724 [Shigella flexneri K-671]
gi|332765079|gb|EGJ95306.1| hypothetical protein SF293071_3656 [Shigella flexneri 2930-71]
Length = 203
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H RT
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRTI 134
>gi|228957994|ref|ZP_04119731.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801701|gb|EEM48581.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 194
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 18 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGMKPSYSLQYRIDKAAEYLKS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 75 HEKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|229144329|ref|ZP_04272735.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
gi|228639116|gb|EEK95540.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
Length = 194
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 18 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 75 HEKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|228984797|ref|ZP_04144969.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155285|ref|ZP_04283396.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228628210|gb|EEK84926.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228774995|gb|EEM23389.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 194
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 18 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 75 HEKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|47566094|ref|ZP_00237132.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
gi|47557011|gb|EAL15341.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
Length = 192
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
+GF+ + Y K + + I+VL RI++A E L++
Sbjct: 21 VGFLQYNIY-KHGQMNETYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKAI 77
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + ++ ++ +AE I + K+ +T+ N + + N
Sbjct: 78 AIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKK 136
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 137 GMIVTNDFHMFRA 149
>gi|312172909|emb|CBX81165.1| Protein sanA [Erwinia amylovora ATCC BAA-2158]
Length = 237
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RMQGALNAYNSGKVNYLLLSGDNARQSYNEPMTMRRDLIAAGVDPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R L ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--LIALHMGIQAQCYAVPSPK 173
>gi|110806968|ref|YP_690488.1| hypothetical protein SFV_3127 [Shigella flexneri 5 str. 8401]
gi|110616516|gb|ABF05183.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|332998695|gb|EGK18291.1| hypothetical protein SFVA6_3977 [Shigella flexneri VA-6]
gi|332999851|gb|EGK19435.1| hypothetical protein SFK272_3936 [Shigella flexneri K-272]
gi|333000191|gb|EGK19774.1| hypothetical protein SFK218_4113 [Shigella flexneri K-218]
gi|333015721|gb|EGK35060.1| hypothetical protein SFK227_3624 [Shigella flexneri K-227]
Length = 230
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|213023249|ref|ZP_03337696.1| hypothetical protein Salmonelentericaenterica_11945 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 261
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDINDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|194431622|ref|ZP_03063913.1| putative SanA protein [Shigella dysenteriae 1012]
gi|194419978|gb|EDX36056.1| putative SanA protein [Shigella dysenteriae 1012]
gi|320177710|gb|EFW52699.1| SanA protein [Shigella boydii ATCC 9905]
gi|332086758|gb|EGI91896.1| hypothetical protein SD15574_3621 [Shigella dysenteriae 155-74]
Length = 230
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|239940966|ref|ZP_04692903.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239987444|ref|ZP_04708108.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 245
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + ++G + V + ++ + + + I Y ++
Sbjct: 92 AHRLDAAAELYRTGKVKVVLVTGDNSRVEYDEPDAMRTYLTGRGVPDERIVSDYAGFDSW 151
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A ++V+ +H+ R + Y + + ++
Sbjct: 152 DSCVRAKKIF---GVDRAVLVSQGFHIHRAVTLCRSAGID----AYGVGVDEPRDSVWY 203
>gi|217974034|ref|YP_002358785.1| hypothetical protein Sbal223_2876 [Shewanella baltica OS223]
gi|217499169|gb|ACK47362.1| protein of unknown function DUF218 [Shewanella baltica OS223]
Length = 233
Score = 42.9 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 11/120 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L K+ +SG VS ++ + + + I A +T
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMVNAAVELGVDKRRIIQFPLARDTLE 152
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL-EENSSIF 164
AQ W + +VT HMPR P + + ++
Sbjct: 153 EAQYL-QW--ELGEEPFRLVTSATHMPRAMAIFTAK----DLHPEAAPTDFIGRDDFWWR 205
>gi|260662077|ref|ZP_05862973.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
gi|260553460|gb|EEX26352.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
Length = 308
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L + ++ +SG + + + + ++ + E I + + NT
Sbjct: 166 RLLGGLALYQCFPKAELIMSGGQGDDEPEPEAVAMHRFARQKGVPESAIRLETNSTNTAT 225
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N EA + N+ V++VT DYH+ R+ L +R
Sbjct: 226 NLSEAKRFI--NSGDRVVLVTSDYHLLRSLLYARR 258
>gi|229172359|ref|ZP_04299918.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
gi|228610830|gb|EEK68093.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
Length = 194
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
GF+ + Y + I+VL RI++A E L++
Sbjct: 23 AGFLQYNIYKHGQMNAAYD-ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLQSHEKTI 79
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + ++ ++ +AE I + K+ +T+ N + N
Sbjct: 80 AIVSGGKGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENITFSKPLIPDN-MKK 138
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 139 GMIVTNDFHMFRA 151
>gi|16130981|ref|NP_417557.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|89109855|ref|AP_003635.1| predicted thioredoxin-like [Escherichia coli str. K-12 substr.
W3110]
gi|170082628|ref|YP_001731948.1| thioredoxin-like protein [Escherichia coli str. K-12 substr. DH10B]
gi|188493858|ref|ZP_03001128.1| putative SanA protein [Escherichia coli 53638]
gi|238902196|ref|YP_002927992.1| putative thioredoxin-like protein [Escherichia coli BW2952]
gi|253772079|ref|YP_003034910.1| hypothetical protein ECBD_0656 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038256|ref|ZP_04872314.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|254163032|ref|YP_003046140.1| putative thioredoxin-like protein [Escherichia coli B str. REL606]
gi|256024335|ref|ZP_05438200.1| predicted thioredoxin-like protein [Escherichia sp. 4_1_40B]
gi|297518029|ref|ZP_06936415.1| predicted thioredoxin-like protein [Escherichia coli OP50]
gi|300950697|ref|ZP_07164588.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958477|ref|ZP_07170615.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|301644788|ref|ZP_07244763.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307139773|ref|ZP_07499129.1| predicted thioredoxin-like protein [Escherichia coli H736]
gi|331643784|ref|ZP_08344915.1| conserved hypothetical protein [Escherichia coli H736]
gi|1176123|sp|P42598|YGJQ_ECOLI RecName: Full=Uncharacterized protein ygjQ
gi|606024|gb|AAA57887.1| ORF_o230 [Escherichia coli str. K-12 substr. MG1655]
gi|1789468|gb|AAC76121.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|85675886|dbj|BAE77136.1| predicted thioredoxin-like [Escherichia coli str. K12 substr.
W3110]
gi|169890463|gb|ACB04170.1| predicted thioredoxin-like protein [Escherichia coli str. K-12
substr. DH10B]
gi|188489057|gb|EDU64160.1| putative SanA protein [Escherichia coli 53638]
gi|226839880|gb|EEH71901.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|238863133|gb|ACR65131.1| predicted thioredoxin-like protein [Escherichia coli BW2952]
gi|242378634|emb|CAQ33422.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253323123|gb|ACT27725.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974933|gb|ACT40604.1| predicted thioredoxin-like protein [Escherichia coli B str. REL606]
gi|253979089|gb|ACT44759.1| predicted thioredoxin-like protein [Escherichia coli BL21(DE3)]
gi|260447880|gb|ACX38302.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|300314873|gb|EFJ64657.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|300449993|gb|EFK13613.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|301076942|gb|EFK91748.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|309703516|emb|CBJ02856.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315137678|dbj|BAJ44837.1| putative thioredoxin-like protein [Escherichia coli DH1]
gi|323935914|gb|EGB32209.1| hypothetical protein ERCG_02677 [Escherichia coli E1520]
gi|331037255|gb|EGI09479.1| conserved hypothetical protein [Escherichia coli H736]
gi|332345042|gb|AEE58376.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 230
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|323439958|gb|EGA97673.1| hypothetical protein SAO11_1094 [Staphylococcus aureus O11]
Length = 322
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 30/189 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
F+C + + V H + V I+VL R++RA ++ +
Sbjct: 128 FICYLVW---------TVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQ 178
Query: 59 NQI-GEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
Q KI +SG + + + +Q+ I + + I + ++NT N +
Sbjct: 179 QQASATKIIVSGRQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQII 238
Query: 115 EK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
+ ++ VT +H+ R Q++ ++ + PY H L ++ + +
Sbjct: 239 NNLYHKAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKD-YLGVMYQ 297
Query: 169 LRVLLIEYL 177
R+LL Y
Sbjct: 298 YRLLLTLYC 306
>gi|291444403|ref|ZP_06583793.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291347350|gb|EFE74254.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 249
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL + + ++G + V + ++ + + + I Y ++
Sbjct: 96 AHRLDAAAELYRTGKVKVVLVTGDNSRVEYDEPDAMRTYLTGRGVPDERIVSDYAGFDSW 155
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
+ A ++V+ +H+ R + Y + + ++
Sbjct: 156 DSCVRAKKIF---GVDRAVLVSQGFHIHRAVTLCRSAGID----AYGVGVDEPRDSVWY 207
>gi|325676948|ref|ZP_08156620.1| membrane protein [Rhodococcus equi ATCC 33707]
gi|325552248|gb|EGD21938.1| membrane protein [Rhodococcus equi ATCC 33707]
Length = 218
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 10/134 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ--KIPIRQDLAECCIDIGYKALNTE 104
R++ L+ + + +SG H S D + + + + I L+T
Sbjct: 62 QGRLDTTARLVRDGKVAVVLVSGDAHGRSGDEIAAMVEYLVEVGVPRTSIVADPYGLDTY 121
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
A+ + L VT +H+PRT + + + + S
Sbjct: 122 DTCVRAAE---TFGIRNALFVTQPFHLPRTVALARAAG----IEAHGVYAGRAGGRRSTL 174
Query: 165 KIKILRVLLIEYLK 178
+R +L Y K
Sbjct: 175 VRNTVREMLA-YPK 187
>gi|281354944|ref|ZP_06241438.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
gi|281317824|gb|EFB01844.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
Length = 225
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A L K+ +SG + ++ ++ I + +A I Y L T +
Sbjct: 78 RMDAAARLYHAGKVRKLIVSGDNRRRDYNEPEDMRAALIERGVAPEDIYADYAGLRTLDS 137
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF-LELQRINSTVQFIPYPIISHDLEENSSIFK 165
A + +V+ H R + V F + +
Sbjct: 138 VIRAKKIF---GQTRITVVSQKDHCERALYIARNHGIDAVGFAARDVSLRRFRLKQRWRE 194
Query: 166 IKILRVLLIEYLKIL 180
RVL + +K+L
Sbjct: 195 -AFARVLAVVDVKLL 208
>gi|208779215|ref|ZP_03246561.1| conserved hypothetical protein [Francisella novicida FTG]
gi|208745015|gb|EDZ91313.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 231
Score = 42.9 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 27/211 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF L + G + I + I + I++L
Sbjct: 26 LRYFIVALTIVYYLIGNGVLGTILALPLKSESTDIKACANTKGIILLGAGINDAFGKLEP 85
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG +S+ + + + + + I +
Sbjct: 86 ALSAYDRILKTAEVYHQ-YPQQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKN 144
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ N+ + +VT H R + + I +++
Sbjct: 145 SKNTYQNAEFIKKILM-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 203
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + I + ++ EYL I I++ LS+
Sbjct: 204 LPNSYNFYITQNIVHEYLGI----IRIYLSS 230
>gi|293396978|ref|ZP_06641252.1| membrane protein SanA [Serratia odorifera DSM 4582]
gi|291420449|gb|EFE93704.1| membrane protein SanA [Serratia odorifera DSM 4582]
Length = 248
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVKYLLLSGDNALQSYNEPMTMRRDLIAAGIAPSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDANDFT---IITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|215488415|ref|YP_002330846.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312968569|ref|ZP_07782778.1| sanA [Escherichia coli 2362-75]
gi|215266487|emb|CAS10926.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312286787|gb|EFR14698.1| sanA [Escherichia coli 2362-75]
Length = 230
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDSAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|315604221|ref|ZP_07879287.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313927|gb|EFU61978.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 330
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 20/162 (12%)
Query: 4 FWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
F + C +F + F + + Y +P I++ R+ER
Sbjct: 122 FVLAVTACGAWFFLSFAAMLLYSWLYRSLPRRRRYDFIIIHGAGLKGKELTPLLAGRVER 181
Query: 53 AFELL-ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A EL + SG +S+ + + + I + ++ T N
Sbjct: 182 ACELWNAQGRRATLVPSGGQGEDEEISEAEAMARHLRALGVPASQIALEDRSTTTWENLS 241
Query: 109 EASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + + +VT DYH+ R + + +
Sbjct: 242 FSRDLIAERSSVPDPRS-ALVTSDYHVFRAAMYARAVGLNAD 282
>gi|238761078|ref|ZP_04622055.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
gi|238761331|ref|ZP_04622307.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700305|gb|EEP93046.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700558|gb|EEP93298.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
Length = 275
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + HS ++ + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALHSYNEPMTMRRDLIAAGVAPSDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|326441038|ref|ZP_08215772.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 204
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A +L + I ++G + + ++ + + + E I + ++
Sbjct: 51 AHRLDTAADLYRRGKVKVILVTGDNSREEYDEPDAMRTYLVGRGVPERRIVSDHAGFDSW 110
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ A ++V+ +H+ R +
Sbjct: 111 DSCVRAKEIF---GVDRAVLVSQGFHIRRAVALCRTAG 145
>gi|218295589|ref|ZP_03496385.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
gi|218243748|gb|EED10275.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
Length = 211
Score = 42.9 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 21/169 (12%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLT----GEP------IRIERAFELLENQIGEKIFI 67
G F+ + + + IVVL G R+ A L + + +I +
Sbjct: 3 GVRGFVALLFLLSPVLAAEYAWIVVLGAAQYGGRPSPALERRLLAALALYQKGLAPRIAV 62
Query: 68 SG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G ++S+ + + + + + + ++ +T N + + +L+
Sbjct: 63 AGGKAAGDTLSEGEAGCRYLMARGVPQEALLCETRSQSTYQNLL----FLRPHLEGRILL 118
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
VT H+PR L R+ ++ YP+ + + R+ L
Sbjct: 119 VTDAPHLPRALF-LARLL-GLKAEGYPV--PGRYPPQYWLRESLYRLWL 163
>gi|213586757|ref|ZP_03368583.1| hypothetical protein SentesTyph_37945 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 213
Score = 42.5 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 43 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 97
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 98 RTLDSIVRTRKVFDINDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 147
>gi|196039056|ref|ZP_03106363.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030201|gb|EDX68801.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 192
Score = 42.5 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ MGF+ + Y K + I+VL RI++A E L++
Sbjct: 16 VCAVYMGFLQYNIY-KHGKMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 72
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ ++AE I + K+++T+ N + +
Sbjct: 73 HEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSMSTDENIKFSKPLIPD 132
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 133 N-MKKGMIVTNDFHMFRA 149
>gi|254372782|ref|ZP_04988271.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570509|gb|EDN36163.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 231
Score = 42.5 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 27/211 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF L + G + I + I + I++L
Sbjct: 26 LRYFIVALTIVYYLIGNGVLGTILALPLKSESTDIKACANTKGIILLGAGINDAFGKLEP 85
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG +S+ + + + + + I +
Sbjct: 86 ALSAYDRILKTAEVYHQHP-QQIIISGGAPFGEKLSEAEIYADLLDKLGIPKSKIILEKN 144
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ N+ + +VT H R + + I +++
Sbjct: 145 SKNTYQNAEFIKKILM-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 203
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + I + ++ EYL I I++ LS+
Sbjct: 204 LPNAYNFYITQNIVHEYLGI----IRIYLSS 230
>gi|332092637|gb|EGI97708.1| sanA [Shigella dysenteriae 155-74]
Length = 235
Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 65 RIQGAINAYNSGKINYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 119
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 120 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 169
>gi|94264714|ref|ZP_01288494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454823|gb|EAT05073.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 78
Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 118 NFHHVLIVTHDYHMPRTFLELQR-------INSTVQFIPYPIISHDLEENSSIFKIKILR 170
VL+VT HMPR+ + + + IP P+ H L +
Sbjct: 3 GQRPVLLVTSAQHMPRSLATFRAVGINAVPAPADFEVIPQPL--HPLRLLPDAHSLHQST 60
Query: 171 VLLIEYLKILLLSIQ 185
L EYL +L+ ++
Sbjct: 61 SALKEYLGLLVYRLR 75
>gi|157158500|ref|YP_001464548.1| putative SanA protein [Escherichia coli E24377A]
gi|193067263|ref|ZP_03048231.1| putative SanA protein [Escherichia coli E110019]
gi|300922298|ref|ZP_07138423.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|301325559|ref|ZP_07219027.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|157080530|gb|ABV20238.1| putative SanA protein [Escherichia coli E24377A]
gi|192959220|gb|EDV89655.1| putative SanA protein [Escherichia coli E110019]
gi|300421360|gb|EFK04671.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|300847610|gb|EFK75370.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|320201996|gb|EFW76571.1| SanA protein [Escherichia coli EC4100B]
Length = 227
Score = 42.5 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +QK I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQKALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|228908043|ref|ZP_04071891.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
gi|228851461|gb|EEM96267.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
Length = 162
Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I I ++ NT
Sbjct: 33 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNT 92
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N H ++V++ YH+ RT
Sbjct: 93 YENLKFSMDL---YNVEHAVVVSNTYHLYRT 120
>gi|160935020|ref|ZP_02082406.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
gi|156866473|gb|EDO59845.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
Length = 262
Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 18/145 (12%)
Query: 8 LFVCLIFFIMGFISF---IRYVKQMHIPDHPSVSAIVVLTG----EPI-------RIERA 53
L + F+ F + + I P + VV+ G R+E A
Sbjct: 77 LLSAASLALGAFLVFGAVMSCLMAAAIHRPPKENGTVVILGCQVKGTQPSLMLTKRLEAA 136
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L+ SG VS+ ++ + + E I ++ +T N + +
Sbjct: 137 KEYLDRNPEAMCIPSGGKGNGELVSEAQAMKAWLVEHGIDENRIYPEAQSRDTVENIRNS 196
Query: 111 SAWAEKNNF-HHVLIVTHDYHMPRT 134
+ +++V+ +H R
Sbjct: 197 KEIMDSKGLPKDMILVSDGFHQYRA 221
>gi|227815532|ref|YP_002815541.1| hypothetical protein BAMEG_2945 [Bacillus anthracis str. CDC 684]
gi|229604535|ref|YP_002866117.1| hypothetical protein BAA_1717 [Bacillus anthracis str. A0248]
gi|227002403|gb|ACP12146.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229268943|gb|ACQ50580.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 178
Score = 42.5 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELL 57
VC+++ MGF+ + Y K + I+VL RI++A E L
Sbjct: 2 VCVVY--MGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYL 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 57 KSHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLI 116
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 117 PDN-MKKGMIVTNDFHMFRA 135
>gi|300722543|ref|YP_003711833.1| hypothetical protein XNC1_1572 [Xenorhabdus nematophila ATCC 19061]
gi|297629050|emb|CBJ89635.1| putative enzyme [Xenorhabdus nematophila ATCC 19061]
Length = 269
Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L G K+ +G V+ S+S + + + L+TE
Sbjct: 113 RVTEGIRLYHLNPGAKMIFTGGKGVN-SISSAEVAAMVAQSMGIPVEDTIALKNPLDTEE 171
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A E K F ++VT HM R ++ ++ I P
Sbjct: 172 EAAEIENVIGKQPF---ILVTSANHMERAVRFFEQ--RGLRPIAAP 212
>gi|82545342|ref|YP_409289.1| hypothetical protein SBO_2947 [Shigella boydii Sb227]
gi|81246753|gb|ABB67461.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 227
Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +QK I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQKALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|295112887|emb|CBL31524.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
Length = 371
Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|90407003|ref|ZP_01215193.1| putative membrane protein [Psychromonas sp. CNPT3]
gi|90311874|gb|EAS39969.1| putative membrane protein [Psychromonas sp. CNPT3]
Length = 267
Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 12/149 (8%)
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R A L + + +SG S LL+++ ++ + I +A +T+
Sbjct: 111 SRFIEALRLYQANPNATLIVSGGSFGDEKSHAQLLEELALQFAIPLNHIIRIDEAKDTDD 170
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYP-IISHDLE 158
+VT HMPR + PY +
Sbjct: 171 EIAAMQKIIRGKK---AALVTSATHMPRALSLFKAQGLSPIPAPAHYLAPYSKTVLPSYR 227
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+ S ++ + EYL L LS++ +
Sbjct: 228 KLPSSLALRHTTIAWHEYLGALQLSLKQT 256
>gi|194431510|ref|ZP_03063802.1| protein SanA [Shigella dysenteriae 1012]
gi|194420335|gb|EDX36412.1| protein SanA [Shigella dysenteriae 1012]
Length = 239
Score = 42.5 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKINYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|229043469|ref|ZP_04191179.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
gi|228725847|gb|EEL77094.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
Length = 196
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 20 VCAIYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 76
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 77 HDKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 136
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 137 N-MKKGMIVTNDFHMFRA 153
>gi|331090798|ref|ZP_08339645.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399906|gb|EGG79565.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 241
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-IRYVKQMHIPDHPSVS---AIVVL---------TGE-P 47
R + I F + F+ F + + SV I++L TG
Sbjct: 50 RMAKWLYLPFQIGFTVAFLVFLAVEILILSGMIPSSVDDFFTIIILGACVKGKRVTGSLR 109
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+++ E L K+ +SG V++ ++ + + + I + K+ +TE
Sbjct: 110 KRLDKGAEYLLGHENTKVIVSGGQGKGEDVTEAFAMKNYLLDKGIDGKRIIMEEKSHSTE 169
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQFIP 149
N + + + V IVT+++H+ R +R+ V IP
Sbjct: 170 ENLKYSLQYITDTK-EKVGIVTNNFHVYRGIKLAKRVGYKDVNGIP 214
>gi|325281519|ref|YP_004254061.1| hypothetical protein Odosp_2910 [Odoribacter splanchnicus DSM
20712]
gi|324313328|gb|ADY33881.1| protein of unknown function DUF218 [Odoribacter splanchnicus DSM
20712]
Length = 227
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A EL + +I +SG + ++ + ++K I + + I + + + T +
Sbjct: 85 RITAAVELFQAGKISRILVSGDNRRMNYNEPVEMRKALIAHGIPDSVIVMDFAGIRTLDS 144
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A ++ F I++ +H R
Sbjct: 145 VIRAKKVFGQDRFT---IISQRFHNERALY 171
>gi|228932998|ref|ZP_04095861.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826599|gb|EEM72370.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 194
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ MGF+ + Y K + I+VL RI++A E L++
Sbjct: 18 VCAVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ ++AE I + + +T+ N + +
Sbjct: 75 HKKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDTSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|255084371|ref|XP_002508760.1| predicted protein [Micromonas sp. RCC299]
gi|226524037|gb|ACO70018.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 30/149 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQ------IGEKI 65
R +P A+VV+ G R++ A + +
Sbjct: 73 SRQFPSTDVPSDAFYDAVVVVAGGMTDSGGLPPWVVSRLDHAVDEYRRHVTATPPKKMYV 132
Query: 66 FISGVHHSVSKDIL------------LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+SG L + + + + + +++T GNA +
Sbjct: 133 VLSGSATPHKPPPLQKGGFMLHESTAMAEYVVAAGVPPQAVLKDTASMDTIGNAYYSLTL 192
Query: 114 -AEKNNFHHVLIVTHDYHMPRTFLELQRI 141
A N+ V +VT ++H RT + +
Sbjct: 193 HAAPRNWRRVQVVTSEFHAGRTRAAFEWV 221
>gi|330467123|ref|YP_004404866.1| hypothetical protein VAB18032_15780 [Verrucosispora maris
AB-18-032]
gi|328810094|gb|AEB44266.1| hypothetical protein VAB18032_15780 [Verrucosispora maris
AB-18-032]
Length = 224
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 9/105 (8%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEG 105
A L + + I +G + + + ++ + + + + +A NT
Sbjct: 53 ATRLFQAGLFPWIVFTGANAPTTIERFPHGEAVHYREYAVEHGVPAESVLVEPRATNTAE 112
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + A + VLI++ Y R + + + V +
Sbjct: 113 NLEYSRALLAERQIPVKSVLIMSRPYQQRRAYATCRLMWPEVDVV 157
>gi|304397472|ref|ZP_07379350.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355090|gb|EFM19459.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 239
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKAGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R + +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALQLGIQAQCYAVPSPK 173
>gi|294672924|ref|YP_003573540.1| hypothetical protein PRU_0141 [Prevotella ruminicola 23]
gi|294472636|gb|ADE82025.1| conserved domain protein [Prevotella ruminicola 23]
Length = 447
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDI---GYKALN 102
RI+ A +L + E+I ISG V++ ++ + + + I + GY+ +N
Sbjct: 58 RIDAAEQLYKAGKIEQILISGDENSLDGVNEPECMRDSLVARGVPSSAIILDGKGYRTIN 117
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A + I++ ++H R + + + V+
Sbjct: 118 SIVDANKV------FGLKSFTIISQEFHNERAIYQAEHLGLDVE 155
>gi|86739984|ref|YP_480384.1| hypothetical protein Francci3_1277 [Frankia sp. CcI3]
gi|86566846|gb|ABD10655.1| protein of unknown function DUF218 [Frankia sp. CcI3]
Length = 245
Score = 42.5 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 26/212 (12%), Positives = 68/212 (32%), Gaps = 22/212 (10%)
Query: 2 RYFWYGLFVCLI-FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
R+ + L+ ++ ++F++ P +VVL G R
Sbjct: 41 RWMMRAVAAVLLGIMVLAVVTFLQVWWVGREDHRPRSDVLVVL-GASQYDGRPSAVLAAR 99
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ EL I ++ G ++ ++ + + + + NT G+
Sbjct: 100 LDHVLELYREGIAPQVITVGGKQPGDRYTEGEASATYLRQRGIPPDRVLVLPEGSNTLGS 159
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ ++H ++VT +H R+ + + + S +
Sbjct: 160 LTAVAGLMNSRHWHTAVLVTDPWHSLRSRTMARDLGVD------AVTSPADRGPAVHGFG 213
Query: 167 KILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
+R ++ E + + S +A+ +
Sbjct: 214 TQVRYIIREGIGYRWYQLFRQASPPSATTRAV 245
>gi|318061872|ref|ZP_07980593.1| hypothetical protein SSA3_28290 [Streptomyces sp. SA3_actG]
gi|318078572|ref|ZP_07985904.1| hypothetical protein SSA3_18119 [Streptomyces sp. SA3_actF]
Length = 227
Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGVHHSVSKDILLQ--KIPIRQDL 89
D + A + L + + A +L + + +G + S + + + +
Sbjct: 33 DPRACDAAIALGCNDLGVSTYAADLYRAGLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHA 92
Query: 90 AECCI-----DIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRIN 142
+ + +A NT N A VL+VT Y R F ++
Sbjct: 93 LALGVPAHAMLLEPRAANTGQNIAFARETLTDAGLRPRSVLLVTMPYMERRAFATFRKQW 152
Query: 143 STVQFI 148
V+ +
Sbjct: 153 PEVEVV 158
>gi|332882613|ref|ZP_08450225.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679413|gb|EGJ52398.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 212
Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RIE A +L E + + I +SG +H ++ ++K +++ + E I + Y T +
Sbjct: 77 RIEAAVQLYEAKKIQYILVSGDNHRNDYNEPEEMKKALMQRGVPEANIILDYAGFRTLDS 136
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A K F LI++ +H R
Sbjct: 137 VVRAKKVFGKERF---LIISQRFHNQRALY 163
>gi|322709982|gb|EFZ01557.1| hypothetical protein MAA_02786 [Metarhizium anisopliae ARSEF 23]
Length = 225
Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 21/144 (14%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGVH-----------HSVS 75
Q+ +P P AI L R+ R A +L + + + SG + +
Sbjct: 19 QLRMPIRP-ADAIFCLCSLDTRVARRAAQLYLDGLAPMLIFSGASGQLTAGRFAKTEAET 77
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPR 133
+ + + + D + + +A NT N + A + +++V Y R
Sbjct: 78 FADVARAMGVPGD----RVVVEPRATNTGENVRFTHALLQGMGLRPESLILVQKPYMERR 133
Query: 134 TFLELQRINSTVQFIPYPIISHDL 157
T+ ++ + + S
Sbjct: 134 TYATFRKQWPGET--SFAVTSPQF 155
>gi|224502681|ref|ZP_03670988.1| hypothetical protein LmonFR_09199 [Listeria monocytogenes FSL
R2-561]
gi|254832250|ref|ZP_05236905.1| hypothetical protein Lmon1_12929 [Listeria monocytogenes 10403S]
Length = 312
Score = 42.5 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 94 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 153
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ I Q + E I + ++
Sbjct: 154 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQS 213
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 214 VNTLQNMKFSKAKMDAIMSNYNSLFS-TNNFHLFRA 248
>gi|323188468|gb|EFZ73753.1| sanA [Escherichia coli RN587/1]
Length = 230
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|296502298|ref|YP_003663998.1| hypothetical protein BMB171_C1462 [Bacillus thuringiensis BMB171]
gi|296323350|gb|ADH06278.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 192
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 16 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 72
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 73 HDKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 132
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 133 N-MKKGMIVTNDFHMFRA 149
>gi|229109172|ref|ZP_04238771.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
gi|228674182|gb|EEL29427.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
Length = 196
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 20 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 76
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 77 HDKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 136
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 137 N-MKKGMIVTNDFHMFRA 153
>gi|153832603|ref|ZP_01985270.1| transporter [Vibrio harveyi HY01]
gi|148871169|gb|EDL70047.1| transporter [Vibrio harveyi HY01]
Length = 365
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIS 309
>gi|30019764|ref|NP_831395.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229127043|ref|ZP_04256042.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
gi|29895309|gb|AAP08596.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228656396|gb|EEL12235.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
Length = 194
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ +GF+ + Y K + I+VL RI++A E L++
Sbjct: 18 VCAVYVGFLQYNIY-KHGQMNATYEADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 74
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 75 HDKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD 134
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 135 N-MKKGMIVTNDFHMFRA 151
>gi|167757485|ref|ZP_02429612.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|237735048|ref|ZP_04565529.1| membrane-spanning protein [Mollicutes bacterium D7]
gi|167702482|gb|EDS17061.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|229381824|gb|EEO31915.1| membrane-spanning protein [Coprobacillus sp. D7]
Length = 351
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 37/222 (16%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGE----------PIRIE 51
W GL V ++F FI + + HP + I+VL RI+
Sbjct: 134 LWSGLIVMILFLTFHIFLFIETLI-LTNLFHPRKNLNYIIVLGSGLINGNVSPLLAKRIQ 192
Query: 52 RAFELLEN-----QIGEKIFISGV--HHSVSKDIL-LQKIPIRQDLAECCIDIGYKALNT 103
A + + + +SG + L +++ I Q +E I K+ NT
Sbjct: 193 AALKFAKKQEKKKGFAPYLLMSGGQGSDETRAEALAMKEYAIEQGYSEELIITEEKSKNT 252
Query: 104 EGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
N Q + A E+ N+ + YH+ R + +++ +I L
Sbjct: 253 LENMQFSKAVMEEKSHGENYKCAY-ASSSYHLMRAGIYARQVG---------LIMSGLGG 302
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
++ + + +L EY+ L ++ +L L + F TL+
Sbjct: 303 KTAFYYLANA--VLREYIAYLAMNKKLYLVVLGSIFMFGTLM 342
>gi|157376071|ref|YP_001474671.1| hypothetical protein Ssed_2936 [Shewanella sediminis HAW-EB3]
gi|157318445|gb|ABV37543.1| protein of unknown function DUF218 [Shewanella sediminis HAW-EB3]
Length = 251
Score = 42.5 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 15/145 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ---DLAECCIDIGYKALNTEG 105
R+ K+ SG + + + + + I A +T
Sbjct: 105 RLSEGMRQFNLGRDCKLVFSGWNGGTGLHSHAEVMAAAAVELGIPKNRIITFPLAKDTIE 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ W + +VT HMPR+ + P + + ++
Sbjct: 165 EAQFM-KW--EIGNVPFRLVTSASHMPRSMSTFA----NIGLTPQAAPTDFITREGYWWR 217
Query: 166 IKILRVL-----LIEYLKILLLSIQ 185
+ + + EY+ L I+
Sbjct: 218 LDAHNLWSSQRAIHEYVGKLWFQIK 242
>gi|309785402|ref|ZP_07680033.1| sanA [Shigella dysenteriae 1617]
gi|308926522|gb|EFP71998.1| sanA [Shigella dysenteriae 1617]
Length = 147
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|297180867|gb|ADI17072.1| uncharacterized conserved protein [uncultured alpha proteobacterium
HF0010_30A23]
Length = 273
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 33/182 (18%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-----DHPSVSAIVVLTGE--------- 46
+++ G + L F +G + ++ + + +++L G
Sbjct: 43 VQFLALGAVLALFFLPLG-SRLLEPLENRFPAYRFQSEAGRLDGVIILGGAVDLRASMDS 101
Query: 47 ---------PIRIERAFELLENQIGEKIFISGVH------HSVSKDILLQKIPIRQDLAE 91
RI A E+L + ++++G V + L+ + +Q
Sbjct: 102 AALIQVGSASDRILTAIEVLAQSNLD-LYLTGGDGALTRRVEVGEAALVAEWLGQQGFDS 160
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
I + ++ NT + Q + +VT +HMPR ++ S + +P P
Sbjct: 161 GRIRVESQSRNTAEHPQALLEEFPELQTGLYGLVTSAFHMPRAVGVFRK--SGIAVVPIP 218
Query: 152 II 153
+
Sbjct: 219 VD 220
>gi|283456241|ref|YP_003360805.1| hypothetical protein BDP_1370 [Bifidobacterium dentium Bd1]
gi|283102875|gb|ADB09981.1| Conserved hypothetical protein [Bifidobacterium dentium Bd1]
Length = 208
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 18/145 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + I + V +M P + ++VL R+++A
Sbjct: 28 ILVALICIAVVAFGTVEGCIVSKMGAQGKPGLDYVIVL--GAQVHRARPSRVLKFRLDKA 85
Query: 54 FELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L + +SG S + +AE I K+ TE N +
Sbjct: 86 IEYLNDNPKTICIVSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINS 145
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTF 135
N V I+T+D+H+ R
Sbjct: 146 KKLIADEN-ASVGIITNDFHVFRAL 169
>gi|168797681|ref|ZP_02822688.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|189379690|gb|EDU98106.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|209759082|gb|ACI77853.1| hypothetical protein ECs3968 [Escherichia coli]
gi|326337790|gb|EGD61624.1| SanA protein [Escherichia coli O157:H7 str. 1125]
Length = 230
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFGENHIT---IISQEFHNQRAI 161
>gi|15803627|ref|NP_289660.1| hypothetical protein Z4439 [Escherichia coli O157:H7 EDL933]
gi|15833222|ref|NP_311995.1| hypothetical protein ECs3968 [Escherichia coli O157:H7 str. Sakai]
gi|168749322|ref|ZP_02774344.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|168754061|ref|ZP_02779068.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|168762043|ref|ZP_02787050.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|168769498|ref|ZP_02794505.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|168773253|ref|ZP_02798260.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|168781224|ref|ZP_02806231.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|168785964|ref|ZP_02810971.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|195937232|ref|ZP_03082614.1| hypothetical protein EscherichcoliO157_12386 [Escherichia coli
O157:H7 str. EC4024]
gi|208808971|ref|ZP_03251308.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208812247|ref|ZP_03253576.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208821014|ref|ZP_03261334.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209400696|ref|YP_002272559.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|217327782|ref|ZP_03443865.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254795037|ref|YP_003079874.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|261228098|ref|ZP_05942379.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254954|ref|ZP_05947487.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK966]
gi|12517673|gb|AAG58219.1|AE005538_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363441|dbj|BAB37391.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187770753|gb|EDU34597.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|188016392|gb|EDU54514.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|189000998|gb|EDU69984.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|189358584|gb|EDU77003.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|189361482|gb|EDU79901.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|189367600|gb|EDU86016.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|189373918|gb|EDU92334.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|208728772|gb|EDZ78373.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208733524|gb|EDZ82211.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208741137|gb|EDZ88819.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209162096|gb|ACI39529.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|209759080|gb|ACI77852.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759086|gb|ACI77855.1| hypothetical protein ECs3968 [Escherichia coli]
gi|217320149|gb|EEC28574.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254594437|gb|ACT73798.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|320189438|gb|EFW64097.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320640159|gb|EFX09731.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
G5101]
gi|326347355|gb|EGD71080.1| SanA protein [Escherichia coli O157:H7 str. 1044]
Length = 230
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFGENHIT---IISQEFHNQRAI 161
>gi|314934418|ref|ZP_07841777.1| putative membrane protein [Staphylococcus caprae C87]
gi|313652348|gb|EFS16111.1| putative membrane protein [Staphylococcus caprae C87]
Length = 320
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 16/118 (13%)
Query: 34 HPSVSAIVVLTGE----------PIRIERAFELLE-NQIGEKIFISGV---HHSVSKDIL 79
+V I+VL R+ A ++ E + + +SG +++ +
Sbjct: 144 SKNVDLIMVLGAGIFTEEVTPMLAERLNCAIKVYESQKHSPYMLVSGGQGPDEPITEALA 203
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTF 135
+++ I + + E I + ++ NT N + E++ L VT +H+ R+
Sbjct: 204 MKRYLIAKGVPEKRILMEAQSTNTYTNFLYSKPIIEEHFGRRAQFLCVTSQFHILRSL 261
>gi|187731370|ref|YP_001881843.1| putative SanA protein [Shigella boydii CDC 3083-94]
gi|187428362|gb|ACD07636.1| putative SanA protein [Shigella boydii CDC 3083-94]
Length = 227
Score = 42.5 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +QK I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQKALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 133 VVRAKKVFGENHIT---IISQEFHNQRAI 158
>gi|16761126|ref|NP_456743.1| hypothetical protein STY2414 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141178|ref|NP_804520.1| hypothetical protein t0671 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052359|ref|ZP_03345237.1| hypothetical protein Salmoneentericaenterica_05146 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419691|ref|ZP_03352757.1| hypothetical protein Salmonentericaenterica_18613 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213428215|ref|ZP_03360965.1| hypothetical protein SentesTyphi_23210 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646119|ref|ZP_03376172.1| hypothetical protein SentesTy_01466 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213854518|ref|ZP_03382758.1| hypothetical protein SentesT_10514 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289811814|ref|ZP_06542443.1| hypothetical protein Salmonellaentericaenterica_48927 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|289824283|ref|ZP_06543878.1| hypothetical protein Salmonellentericaenterica_03714 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25306415|pir||AF0780 vancomycin resistance protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503424|emb|CAD02564.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136804|gb|AAO68369.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 239
Score = 42.5 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 124 RTLDSIVRTRKVFDINDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 173
>gi|238757214|ref|ZP_04618401.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
gi|238704592|gb|EEP97122.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
Length = 257
Score = 42.5 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGALNAYNSGKVSYLLLSGDNALQSYNEPMTMRRDLIAAGVAPSDIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|302333991|gb|ADL24184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 171
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 47 PIRIERAFELLENQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R++RA ++ + Q KI +SG + + + +Q+ I + + I + ++N
Sbjct: 16 AARLDRALDIYQQQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSIN 75
Query: 103 TEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHD 156
T N + + ++ VT +H+ R Q++ ++ + PY H
Sbjct: 76 TYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHV 135
Query: 157 LEENSSIFKIKILRVLLIEYL 177
L ++ + + R+LL Y
Sbjct: 136 LIKD-YLGVMYQYRLLLTLYC 155
>gi|300117365|ref|ZP_07055155.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
gi|298725200|gb|EFI65852.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
Length = 192
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ MGF+ + Y K + I+VL RI++A E L++
Sbjct: 16 VCAVYMGFLQYNIY-KHGKMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 72
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 73 HEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPD 132
Query: 117 NNFHHVLIVTHDYHMPRT----------FLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N +IVT+D+HM R L IP I +
Sbjct: 133 N-MKKGMIVTNDFHMFRAKKIAAKQGLQLEGLSAATPKRIVIPSNIREYLAITQYWFMD 190
>gi|171915828|ref|ZP_02931298.1| hypothetical protein VspiD_31695 [Verrucomicrobium spinosum DSM
4136]
Length = 260
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 57/160 (35%), Gaps = 18/160 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A +LLE + + +SG + ++ ++ I + + I Y T +
Sbjct: 105 RVDAAAKLLEAGKVQFLLVSGDNNRDGQNEPQDMKDALIAKGIPADRIYCDYSGFRTLDS 164
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + + I++ ++H R +R +P + + + +
Sbjct: 165 VVRARQIFGQRDMT---IISQNFHNERALYMARRFG-----LPDSVAFNAEDADPQW--- 213
Query: 167 KILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEITV 206
+ YL+ + + L + + L +++ +
Sbjct: 214 -----MFKMYLREIGARVMAVLDVEVLNTKPRELGDKVNI 248
>gi|52143746|ref|YP_083083.1| hypothetical protein BCZK1488 [Bacillus cereus E33L]
gi|51977215|gb|AAU18765.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 192
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLE 58
+ MGF+ + Y K + I+VL RI++A E L+
Sbjct: 15 MVCAVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLK 71
Query: 59 NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 72 SHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIP 131
Query: 116 KNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 132 DN-MKKGMIVTNDFHMFRA 149
>gi|301053252|ref|YP_003791463.1| hypothetical protein BACI_c16640 [Bacillus anthracis CI]
gi|300375421|gb|ADK04325.1| putative membrane protein [Bacillus cereus biovar anthracis str.
CI]
Length = 179
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLEN 59
+ MGF+ + Y K + I+VL RI++A E L++
Sbjct: 16 VCAVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKS 72
Query: 60 QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 73 HEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPD 132
Query: 117 NNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 133 N-MKKGMIVTNDFHMFRA 149
>gi|291284464|ref|YP_003501282.1| putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|209759078|gb|ACI77851.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759084|gb|ACI77854.1| hypothetical protein ECs3968 [Escherichia coli]
gi|290764337|gb|ADD58298.1| Putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|320645456|gb|EFX14465.1| putative SanA protein [Escherichia coli O157:H- str. 493-89]
gi|320650767|gb|EFX19224.1| putative SanA protein [Escherichia coli O157:H- str. H 2687]
gi|320656146|gb|EFX24058.1| putative SanA protein [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666987|gb|EFX33963.1| putative SanA protein [Escherichia coli O157:H7 str. LSU-61]
Length = 230
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFGENHIT---IISQEFHNQRAI 161
>gi|213618662|ref|ZP_03372488.1| hypothetical protein SentesTyp_20225 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 221
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 51 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPAD-----IVLDYAGF 105
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + + N+F +I+T +H R ++ +Q Y + S
Sbjct: 106 RTLDSIVRTRKVFDINDF---IIITQRFHCERAL--FIALHMGIQAQCYAVPSPK 155
>gi|170024788|ref|YP_001721293.1| hypothetical protein YPK_2563 [Yersinia pseudotuberculosis YPIII]
gi|169751322|gb|ACA68840.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
Length = 245
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGAINAYNSGKISYLLLSGDNAQHSYNEPMTMRRDLIAAGVAPADIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|261250945|ref|ZP_05943519.1| hypothetical protein VIA_000963 [Vibrio orientalis CIP 102891]
gi|260937818|gb|EEX93806.1| hypothetical protein VIA_000963 [Vibrio orientalis CIP 102891]
Length = 277
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 18/115 (15%)
Query: 46 EPIRIERAFELLEN---QIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAECCID 95
R+E +LL+ Q +F GV + LL+ +P + L I
Sbjct: 23 GISRVEGLVKLLDQVNDQETAFVFCGGVTDGQTTSEAEAMHQYLLRLLPAYKTLPPH-IL 81
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHH------VLIVTHDYHMPRTFLELQRINST 144
I ++ NT N Q A+ + V+ V++DYH+ R E+Q +
Sbjct: 82 IESQSTNTIENIQNAADKLVDSKLCRVGQKIEVIFVSNDYHLKR-IFEIQSLMDE 135
>gi|195536112|ref|ZP_03079119.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|194372589|gb|EDX27300.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
Length = 241
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 27/211 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF L + G + I + I + I++L
Sbjct: 36 LRYFIVALTIVYYLIGNGVLGTILALPLKSESTDIKACANTKGIILLGAGINDAFGKLEP 95
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG +S+ + + + + + I +
Sbjct: 96 ALSAYDRILKTAEVYHQ-YPQQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKN 154
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ N+ + +VT H R + + I +++
Sbjct: 155 SKNTYQNAEFIKKILI-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 213
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + I + ++ EYL I I++ LS+
Sbjct: 214 LPNAYNFYITQNIVHEYLGI----IRIYLSS 240
>gi|118497421|ref|YP_898471.1| hypothetical protein FTN_0829 [Francisella tularensis subsp.
novicida U112]
gi|118423327|gb|ABK89717.1| conserved hypothetical membrane protein [Francisella novicida U112]
Length = 239
Score = 42.2 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 27/211 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF L + G + I + I + I++L
Sbjct: 34 LRYFIVALTIVYYLIGNGVLGTILALPLKSESTDIKACANTKGIILLGAGINDAFGKLEP 93
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG +S+ + + + + + I +
Sbjct: 94 ALSAYDRILKTAEVYHQ-YPQQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKN 152
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ N+ + +VT H R + + I +++
Sbjct: 153 SKNTYQNAEFIKKILI-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 211
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + I + ++ EYL I I++ LS+
Sbjct: 212 LPNAYNFYITQNIVHEYLGI----IRIYLSS 238
>gi|291084551|ref|ZP_06538762.2| hypothetical protein Salmonellaentericaenterica_28467 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 165
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEPI---------RI 50
+R + + + FI I+ ++ +Q AIV G R+
Sbjct: 38 LRIAAGIILIMAMVFIHNAIAIYQFSQQNQT---RVADCAIVAGAGVSGKTPSPVFQARL 94
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + I + ++G + +VS + ++ + + + I I ++ T N
Sbjct: 95 DHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENI 154
Query: 108 QEASAWAEKNN 118
+ A + +
Sbjct: 155 RYAKQILRQQH 165
>gi|229090673|ref|ZP_04221906.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
gi|228692615|gb|EEL46341.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
Length = 172
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
MGF+ + Y K + I+VL RI++A E L++
Sbjct: 1 MGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKAI 57
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + ++ ++ ++AE I + K+ +T+ N + + N
Sbjct: 58 AIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKK 116
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 117 GMIVTNDFHMFRA 129
>gi|47526931|ref|YP_018280.1| hypothetical protein GBAA_1645 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65318981|ref|ZP_00391940.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|47502079|gb|AAT30755.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
Length = 172
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLENQIGEK 64
MGF+ + Y K + I+VL RI++A E L++
Sbjct: 1 MGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKAI 57
Query: 65 IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+SG +S+ + ++ ++ ++AE I + K+ +T+ N + + N
Sbjct: 58 AIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKK 116
Query: 122 VLIVTHDYHMPRT 134
+IVT+D+HM R
Sbjct: 117 GMIVTNDFHMFRA 129
>gi|315174445|gb|EFU18462.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 401
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|315145674|gb|EFT89690.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315160239|gb|EFU04256.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 401
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|307279173|ref|ZP_07560231.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
gi|306504298|gb|EFM73510.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
Length = 401
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|238749939|ref|ZP_04611443.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
gi|238711868|gb|EEQ04082.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
Length = 259
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGAINAYNSGKVSYLLLSGDNALQSYNEPMTMRRDLIAAGVAPADIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|227518630|ref|ZP_03948679.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553161|ref|ZP_03983210.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545952|ref|ZP_04434677.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229550144|ref|ZP_04438869.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293383072|ref|ZP_06628990.1| putative membrane protein [Enterococcus faecalis R712]
gi|293387775|ref|ZP_06632319.1| putative membrane protein [Enterococcus faecalis S613]
gi|294779558|ref|ZP_06744952.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300860460|ref|ZP_07106547.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307271145|ref|ZP_07552428.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|307288139|ref|ZP_07568149.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|307291350|ref|ZP_07571234.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|312900627|ref|ZP_07759924.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907338|ref|ZP_07766329.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312909955|ref|ZP_07768803.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312952369|ref|ZP_07771244.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|227073925|gb|EEI11888.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177687|gb|EEI58659.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304730|gb|EEN70726.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229308915|gb|EEN74902.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079737|gb|EFE17101.1| putative membrane protein [Enterococcus faecalis R712]
gi|291082845|gb|EFE19808.1| putative membrane protein [Enterococcus faecalis S613]
gi|294453348|gb|EFG21756.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300849499|gb|EFK77249.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306497581|gb|EFM67114.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|306500875|gb|EFM70193.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|306512643|gb|EFM81292.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|310626366|gb|EFQ09649.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310629753|gb|EFQ13036.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289913|gb|EFQ68469.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311292108|gb|EFQ70664.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027393|gb|EFT39325.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315033767|gb|EFT45699.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315036853|gb|EFT48785.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|315147862|gb|EFT91878.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315150660|gb|EFT94676.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|315153332|gb|EFT97348.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315155890|gb|EFT99906.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|315157942|gb|EFU01959.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315164245|gb|EFU08262.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315166661|gb|EFU10678.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315170055|gb|EFU14072.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575579|gb|EFU87770.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315579979|gb|EFU92170.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|323480601|gb|ADX80040.1| conserved hypothetical protein [Enterococcus faecalis 62]
gi|327535007|gb|AEA93841.1| integral membrane protein [Enterococcus faecalis OG1RF]
Length = 401
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|29375933|ref|NP_815087.1| hypothetical protein EF1366 [Enterococcus faecalis V583]
gi|256853003|ref|ZP_05558373.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256958856|ref|ZP_05563027.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256962050|ref|ZP_05566221.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|257078888|ref|ZP_05573249.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257082665|ref|ZP_05577026.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257086869|ref|ZP_05581230.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257415976|ref|ZP_05592970.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257419178|ref|ZP_05596172.1| predicted protein [Enterococcus faecalis T11]
gi|257422744|ref|ZP_05599734.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|29343395|gb|AAO81157.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|256711462|gb|EEU26500.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256949352|gb|EEU65984.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256952546|gb|EEU69178.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256986918|gb|EEU74220.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256990695|gb|EEU77997.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256994899|gb|EEU82201.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257157804|gb|EEU87764.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257161006|gb|EEU90966.1| predicted protein [Enterococcus faecalis T11]
gi|257164568|gb|EEU94528.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 359
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 138 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 197
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 198 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 254
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 255 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 303
>gi|156935632|ref|YP_001439548.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
gi|156533886|gb|ABU78712.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
Length = 215
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RIE A L + +SG + D + + R + I Y +T +
Sbjct: 57 RIEAAAGLYHAGKVSWLLVSGDNSRADYDEPTAMAEALNRHGVPAAAIFCDYAGFSTLDS 116
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A ++N I++ +H R
Sbjct: 117 VVRAREVFQENRIT---IISQAFHNQRAIY 143
>gi|156975997|ref|YP_001446903.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
gi|156527591|gb|ABU72676.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
Length = 365
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 29/136 (21%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL-- 138
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIAS 310
Query: 139 -QRINSTVQF--IPYP 151
Q + F + YP
Sbjct: 311 WQTGPQDITFDTVSYP 326
>gi|134098017|ref|YP_001103678.1| hypothetical protein SACE_1431 [Saccharopolyspora erythraea NRRL
2338]
gi|291007218|ref|ZP_06565191.1| hypothetical protein SeryN2_22077 [Saccharopolyspora erythraea NRRL
2338]
gi|133910640|emb|CAM00753.1| hypothetical protein SACE_1431 [Saccharopolyspora erythraea NRRL
2338]
Length = 222
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNT 103
++ +L I +G + + + ++ + + + I + +A NT
Sbjct: 47 DQVADLYHAGYFPLIVFTGANAPTTVERFPRGEAVHYRERALELGVPDAAIVVEPRATNT 106
Query: 104 EGNAQEASAWA--EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + +L+V Y R + + I V+ +
Sbjct: 107 GENIEYTRQVLAGRRMEVRSLLMVCKPYQQRRAYATAKHIWPEVEIV 153
>gi|110643330|ref|YP_671060.1| hypothetical protein ECP_3177 [Escherichia coli 536]
gi|110344922|gb|ABG71159.1| hypothetical protein YgjQ [Escherichia coli 536]
Length = 227
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 133 VVRANKVFSENHIT---IISQEFHNQRAI 158
>gi|54302669|ref|YP_132662.1| hypothetical protein PBPRB0990 [Photobacterium profundum SS9]
gi|46916093|emb|CAG22862.1| putative exported protein [Photobacterium profundum SS9]
Length = 366
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E + Q I ++G K L+ + + + I A +T
Sbjct: 215 QRLEMTLAFAKKQPKSLIVLTGGVPKNHKTEGKLMADWLVEKGIDRSRIIEDNYARSTVE 274
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S +++ H I++ H+ R T E+
Sbjct: 275 NALYSSYALARHDIDHATIISSASHVRRGQTLFEIA 310
>gi|320661836|gb|EFX29244.1| putative SanA protein [Escherichia coli O55:H7 str. USDA 5905]
Length = 230
Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFGENHIT---IISQEFHNQRAI 161
>gi|169350021|ref|ZP_02866959.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
gi|169293234|gb|EDS75367.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
Length = 426
Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 20/110 (18%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
+ +A +V+TG S S ++ + K I + E
Sbjct: 151 ANRYPNAYIVVTGGGT-------------------SPADPSKTEGEEMAKWLIANGVDEN 191
Query: 93 CIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHMPRTFLELQRI 141
I + KA T GNA ++ + +++ H+ R Q +
Sbjct: 192 RIIVENKAPTTVGNATNTFRLLKEKPEVKSIAMISSSSHIQRAVAIFQAV 241
>gi|22126538|ref|NP_669961.1| hypothetical protein y2659 [Yersinia pestis KIM 10]
gi|45441225|ref|NP_992764.1| hypothetical protein YP_1400 [Yersinia pestis biovar Microtus str.
91001]
gi|51595862|ref|YP_070053.1| hypothetical protein YPTB1525 [Yersinia pseudotuberculosis IP
32953]
gi|108806802|ref|YP_650718.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|108812630|ref|YP_648397.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|145598748|ref|YP_001162824.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149366431|ref|ZP_01888465.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948508|ref|YP_001401433.1| hypothetical protein YpsIP31758_2464 [Yersinia pseudotuberculosis
IP 31758]
gi|162419195|ref|YP_001607389.1| hypothetical protein YpAngola_A3021 [Yersinia pestis Angola]
gi|165924495|ref|ZP_02220327.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939644|ref|ZP_02228188.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009292|ref|ZP_02230190.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211809|ref|ZP_02237844.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400421|ref|ZP_02305934.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421767|ref|ZP_02313520.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424377|ref|ZP_02316130.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186894949|ref|YP_001872061.1| hypothetical protein YPTS_1635 [Yersinia pseudotuberculosis PB1/+]
gi|218928651|ref|YP_002346526.1| hypothetical protein YPO1510 [Yersinia pestis CO92]
gi|229841490|ref|ZP_04461649.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843602|ref|ZP_04463745.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229894294|ref|ZP_04509477.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|229903025|ref|ZP_04518141.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|270486819|ref|ZP_06203893.1| protein SanA [Yersinia pestis KIM D27]
gi|294503487|ref|YP_003567549.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|21959539|gb|AAM86212.1|AE013868_6 putative oxidoreductase [Yersinia pestis KIM 10]
gi|45436085|gb|AAS61641.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589144|emb|CAH20764.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108776278|gb|ABG18797.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|108778715|gb|ABG12773.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|115347262|emb|CAL20156.1| putative exported protein [Yersinia pestis CO92]
gi|145210444|gb|ABP39851.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149290805|gb|EDM40880.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152960003|gb|ABS47464.1| putative sanA protein [Yersinia pseudotuberculosis IP 31758]
gi|162352010|gb|ABX85958.1| putative sanA protein [Yersinia pestis Angola]
gi|165912441|gb|EDR31074.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923555|gb|EDR40687.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991847|gb|EDR44148.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207580|gb|EDR52060.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960252|gb|EDR56273.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050370|gb|EDR61778.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057226|gb|EDR66989.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186697975|gb|ACC88604.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229679935|gb|EEO76035.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|229689210|gb|EEO81273.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697856|gb|EEO87903.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229703692|gb|EEO90708.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|262361530|gb|ACY58251.1| hypothetical protein YPD4_1343 [Yersinia pestis D106004]
gi|262365731|gb|ACY62288.1| hypothetical protein YPD8_1605 [Yersinia pestis D182038]
gi|270335323|gb|EFA46100.1| protein SanA [Yersinia pestis KIM D27]
gi|294353946|gb|ADE64287.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|320015619|gb|ADV99190.1| hypothetical protein YPC_2643 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 245
Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 10/100 (10%)
Query: 44 TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDI 96
TG RI+ A + + +SG + S + +++ I +A I +
Sbjct: 59 TGGINQFYQYRIQGAINAYNSGKISYLLLSGDNAQHSYNEPMTMRRDLIAAGVAPADIVL 118
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + + N+F +I+T +H R
Sbjct: 119 DYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|323173666|gb|EFZ59295.1| hypothetical protein ECLT68_1983 [Escherichia coli LT-68]
Length = 230
Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +QK I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQKALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|217959196|ref|YP_002337744.1| hypothetical protein BCAH187_A1788 [Bacillus cereus AH187]
gi|229138411|ref|ZP_04267001.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
gi|217065300|gb|ACJ79550.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645043|gb|EEL01285.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
Length = 159
Score = 42.2 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKAHEKAIAIVSGGKGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ +AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|323497618|ref|ZP_08102635.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
gi|323317367|gb|EGA70361.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
Length = 258
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A EL + +SG H S ++ +++ ++ ++ E I + Y T
Sbjct: 82 SHRIEAAIELYNEGKIDNFLLSGDNAHRSYNEPWTMKRDLLKAEVPEENIFLDYAGFRTL 141
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI++ +H R
Sbjct: 142 DSIVRAKEIFDTDNF---LIISQKFHCERALF 170
>gi|91223050|ref|ZP_01258316.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
gi|91191863|gb|EAS78126.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
Length = 365
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 29/136 (21%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL-- 138
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIAS 310
Query: 139 -QRINSTVQF--IPYP 151
Q + F + YP
Sbjct: 311 WQTGPQDITFDTVSYP 326
>gi|255026242|ref|ZP_05298228.1| hypothetical protein LmonocytFSL_07670 [Listeria monocytogenes FSL
J2-003]
Length = 284
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 66 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 125
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ I + + E I + ++
Sbjct: 126 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQS 185
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 186 VNTLQNMKFSKAKMDAIMSNYNSLFS-TNNFHLFRA 220
>gi|90414191|ref|ZP_01222172.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
gi|90324741|gb|EAS41279.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
Length = 367
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E + Q I ++G K L+ + + + I A +T
Sbjct: 216 QRLEMTLAFAKEQPKSLIVLTGGVPKNHKTEGKLMADWLVEKGIDRSRIIEDNYARSTVE 275
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S +++ H I++ H+ R T E+
Sbjct: 276 NALYSSYALARHDIDHATIISSASHVRRGQTLFEIA 311
>gi|332184005|gb|AEE26259.1| putative exported protein [Francisella cf. novicida 3523]
Length = 228
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 23/205 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF + + G + I + I + I++L
Sbjct: 26 LRYFIVAITIIYYLIGNGILGSILAIPLKSESTDIKACANTKGIILLGAGINQAFGKLQP 85
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG S+ + + + + + I +
Sbjct: 86 ALSAYDRILKTAEVYHQ-YPQQIIISGGAPFGEKSSEAEIYADVLYKLGIPKSKIILEKN 144
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ + +VT H R + + I +++
Sbjct: 145 SKNTYQNAEFIKKMLVDDKI-TYCLVTSGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 203
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
+ + I + ++ EYL I+ + +
Sbjct: 204 LPNAYNFYITQNIIHEYLGIVKIYL 228
>gi|315187347|gb|EFU21103.1| hypothetical protein SpithDRAFT_0100 [Spirochaeta thermophila DSM
6578]
Length = 195
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 13 IFFIMGFIS--FIRYVKQ-----MHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEK 64
+ +GF+ F + + A+V L GE R ++ E+ E +
Sbjct: 9 VLLYVGFVLIPFALRMPLRLEDFAVTARVEAPQAVVALEGEIIRRFKKGVEIAEKEGISL 68
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+FI V ++ L+ + I A +T +A+ ++ + +LI
Sbjct: 69 VFIPCVLLEDNR-EYLEDVSASNPPFSIVIGAEGSA-STYEDARITKSFLSERGLSKILI 126
Query: 125 VTHDYHMPRTFLELQRIN 142
VT YH RT L +R+
Sbjct: 127 VTDWYHAWRTLLVFERVL 144
>gi|160885715|ref|ZP_02066718.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
gi|156108528|gb|EDO10273.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
Length = 211
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI EL + + I ISG + ++ ++K +++ + E I + Y T +
Sbjct: 69 RILATVELYKAGKIKYILISGDNRKEDYNEPEEMKKALMQKGIPEKSIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A +N I++ +H R
Sbjct: 129 VVRAKEVFGQNRLT---IISQRFHNERAIY 155
>gi|323979003|gb|EGB74082.1| hypothetical protein ERFG_00182 [Escherichia coli TW10509]
Length = 230
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +++ I++ ++H R
Sbjct: 136 VVRAKKVFGESHIT---IISQEFHNQRAI 161
>gi|255972921|ref|ZP_05423507.1| predicted protein [Enterococcus faecalis T1]
gi|256762373|ref|ZP_05502953.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|255963939|gb|EET96415.1| predicted protein [Enterococcus faecalis T1]
gi|256683624|gb|EEU23319.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|315030014|gb|EFT41946.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 366
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 145 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 204
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 205 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 261
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 262 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 310
>gi|170682034|ref|YP_001745356.1| putative SanA protein [Escherichia coli SMS-3-5]
gi|170519752|gb|ACB17930.1| putative SanA protein [Escherichia coli SMS-3-5]
Length = 227
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 73 RIDSAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 133 VVRANKVFSENHIT---IISQEFHNQRAI 158
>gi|145300590|ref|YP_001143431.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853362|gb|ABO91683.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 299
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 43 LTGEPI------RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCI 94
L G RI+ A EL N + I +SG + +V + +++ I+ + I
Sbjct: 59 LIGGSSNHYFKYRIKAAAELYNNGKVDYILVSGDNATVQYNEPRQMRRALIQAGIPAKVI 118
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y T + A + +F +V+ +H R
Sbjct: 119 YSDYAGFRTLDSIVRAKEVFGQAHFT---VVSQAFHNERAIF 157
>gi|307273352|ref|ZP_07554597.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
gi|306509879|gb|EFM78904.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
Length = 401
Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPRYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|261212370|ref|ZP_05926655.1| conserved hypothetical protein [Vibrio sp. RC341]
gi|260838301|gb|EEX64957.1| conserved hypothetical protein [Vibrio sp. RC341]
Length = 287
Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQKI--------PIRQDLAECCI 94
R+E A + ENQ +F GV S + + L +
Sbjct: 24 GKSRVEGLISALQCHENQTALVVFCGGVTQRQSASEAQRMYEYFQTRCQQLALSLPHVQV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + + + +V++DYH+ R E+Q++
Sbjct: 84 LLEQQSTSTVENIEHVAQLLLTSGHLRVGDTLTLTLVSNDYHLKR-IFEIQQLMNEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
+ V+ +PYP S + ++ RV L
Sbjct: 143 RTLDERCQQAGVRLNISRDINAHISVPYPHRSQQGVRFLWVDELTTYRVFL 193
>gi|255975975|ref|ZP_05426561.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968847|gb|EET99469.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 366
Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 145 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 204
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 205 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 261
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 262 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 310
>gi|117625394|ref|YP_858717.1| hypothetical protein APECO1_3333 [Escherichia coli APEC O1]
gi|218560170|ref|YP_002393083.1| thioredoxin-like [Escherichia coli S88]
gi|237706153|ref|ZP_04536634.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|115514518|gb|ABJ02593.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218366939|emb|CAR04710.1| putative thioredoxin-like [Escherichia coli S88]
gi|226899193|gb|EEH85452.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294491677|gb|ADE90433.1| putative SanA protein [Escherichia coli IHE3034]
gi|307625302|gb|ADN69606.1| putative thioredoxin-like protein [Escherichia coli UM146]
gi|315288869|gb|EFU48267.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|323951383|gb|EGB47258.1| hypothetical protein ERKG_02026 [Escherichia coli H252]
gi|323957755|gb|EGB53469.1| hypothetical protein ERLG_01081 [Escherichia coli H263]
Length = 230
Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|91212515|ref|YP_542501.1| hypothetical protein UTI89_C3524 [Escherichia coli UTI89]
gi|91074089|gb|ABE08970.1| hypothetical protein YgjQ [Escherichia coli UTI89]
Length = 233
Score = 42.2 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 79 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 138
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 139 VVRANKVFSENHIT---IISQEFHNQRAI 164
>gi|242239729|ref|YP_002987910.1| hypothetical protein Dd703_2304 [Dickeya dadantii Ech703]
gi|242131786|gb|ACS86088.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 250
Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 50/139 (35%), Gaps = 13/139 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 69 RIQGALNAYNSGKISYLLLSGDNSLQSYNEPMTMRRDLIAAGVQPVDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ N+F I+T +H R ++ +Q + + S + ++
Sbjct: 129 IVRTRKVFDTNDFT---IITQRFHCERAL--FIALHKGIQAQCFAVPSPK---DIWPVRM 180
Query: 167 K--ILRVLLIEYLKILLLS 183
+ R+ ++ Y +L
Sbjct: 181 REFGARLAML-YDLYVLKR 198
>gi|323966614|gb|EGB62047.1| hypothetical protein ERJG_02203 [Escherichia coli M863]
gi|327251872|gb|EGE63558.1| hypothetical protein ECSTEC7V_3725 [Escherichia coli STEC_7v]
Length = 230
Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +++ I++ ++H R
Sbjct: 136 VVRAKKVFGESHIT---IISQEFHNQRAI 161
>gi|260854211|ref|YP_003228102.1| hypothetical protein ECO26_1046 [Escherichia coli O26:H11 str.
11368]
gi|257752860|dbj|BAI24362.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|323157193|gb|EFZ43316.1| hypothetical protein ECEPECA14_0984 [Escherichia coli EPECa14]
Length = 259
Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 44/157 (28%), Gaps = 25/157 (15%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VH 71
+ V IVVL R+ L G K+ +G +
Sbjct: 75 NSQKVDYIVVLGDGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTN 134
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ ++ + E I + +TE A F L+VT H+
Sbjct: 135 TVSTAEVGARVAQSLGVPREQIITLD-LPKDTEEEAAAVKQAIGDAPF---LLVTSASHL 190
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
PR + Q+ P ++ D N I
Sbjct: 191 PRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPS 227
>gi|126728434|ref|ZP_01744250.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
gi|126711399|gb|EBA10449.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
Length = 156
Score = 42.2 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 56 LLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L + + + +G S+ ++ ++ + E + + A NT N +
Sbjct: 33 LYRSGAVDALLATGGALWGGPSEAEVIARLCAEAGVPETALVLEEAARNTRENIALSLPL 92
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+ V+IVT H PR L +R + P+ + + + R ++
Sbjct: 93 LARMEARRVVIVTDRAHAPRARLVARRHGLEAA-VSCPVPAP--------WSLGRARGVM 143
Query: 174 IEYLKILLLSIQ 185
E + ++
Sbjct: 144 REKVAYGWYWLR 155
>gi|312904109|ref|ZP_07763277.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310632585|gb|EFQ15868.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315578454|gb|EFU90645.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 401
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPRYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|256618946|ref|ZP_05475792.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256965248|ref|ZP_05569419.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256598473|gb|EEU17649.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256955744|gb|EEU72376.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
Length = 359
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 138 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPRYTQDYIVVLGSGLINGEIVPPLLQ 197
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 198 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 254
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 255 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 303
>gi|241896247|ref|ZP_04783543.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
gi|241870488|gb|EER74239.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
Length = 359
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 23/148 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFEL 56
+ + L+F+ + FI+ + +++ P + I+VL RI+ A +
Sbjct: 149 VILYLVFWFLAFIT-SFILTRLYRPKYNQ-DYIIVLGAGLLNGKDVSPLLASRIQIALDF 206
Query: 57 L-----ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ + SG + + + + + + + I ++ T N
Sbjct: 207 ANKQFEKTGYYPWLIFSGGQGGDEKLPEGVAMAEYAKQHGAQSSHVLIEDQSKTTYENML 266
Query: 109 EASAWAEKNNFH--HVLIVTHDYHMPRT 134
+ + + + + L T DYH R
Sbjct: 267 FSKKILQARDLNLANGLFATSDYHTFRA 294
>gi|228914293|ref|ZP_04077908.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926749|ref|ZP_04089817.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121266|ref|ZP_04250497.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228662111|gb|EEL17720.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228832862|gb|EEM78431.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845287|gb|EEM90323.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 159
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L++ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKAIAIVSGGKGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ ++AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|229183906|ref|ZP_04311122.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
gi|228599558|gb|EEK57162.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
Length = 159
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L++ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKSHEKAIAIVSGGKGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ ++AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|291246382|ref|YP_003505768.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
gi|290463913|gb|ADD24900.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
Length = 304
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 21/144 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFE 55
Y + + F + F++F + ++ IVVL RI++A
Sbjct: 111 YIMIIASAFTLSSFLNFFNWKRRDLKY-------IVVLGSGLRGDQVTPLLKSRIDKAIN 163
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ Q K+ +SG + + + + + +++ I ++ NT N Q +
Sbjct: 164 IYRGQKKCKMIMSGGQGEDELIPESVAMLNYAVNSGVSKEDIITETQSKNTRENIQLSYN 223
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFL 136
+ IVT+ YH+ R L
Sbjct: 224 LMMGKP-ERIAIVTNYYHLFRALL 246
>gi|229195925|ref|ZP_04322679.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
gi|228587567|gb|EEK45631.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
Length = 159
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKAHEKAIAIVSGGKGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ +AE I + ++ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NGLMKLKIAEDRIIMEDRSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|297587158|ref|ZP_06945803.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575139|gb|EFH93858.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 308
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 19/129 (14%)
Query: 38 SAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIP 84
IVVL G R+ +F + SG + + + + ++
Sbjct: 140 DYIVVL-GGSMKGIELSDPIKQRMLTSFSYYRTDK-SIMIFSGGKSNGDIEESVAMKNFA 197
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAE----KNNFHHVLIVTHDYHMPRTFLELQR 140
++ ++ + I + A+NT N + + +++ V ++T+++H RT L +
Sbjct: 198 VQNNIQDTDILLEKLAMNTMQNIEYVKTLIQQQDAEHDRKKVCVITNNFHAFRTKLICNK 257
Query: 141 INSTVQFIP 149
+ IP
Sbjct: 258 MKVNWTVIP 266
>gi|32034567|ref|ZP_00134723.1| COG2949: Uncharacterized membrane protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207926|ref|YP_001053151.1| SanA protein [Actinobacillus pleuropneumoniae L20]
gi|126096718|gb|ABN73546.1| SanA protein [Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 229
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 6 YGLFVCLIFFIMGFISFI-RYVKQMHIPDHPSVS---------AIVVLT------GEPI- 48
L I F++ F+ Y +++ D+ A+V+ T G P
Sbjct: 26 IALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGTPNL 85
Query: 49 ----RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIG 97
R+E A +L+ +K+ +SG + V + L + I +++ E G
Sbjct: 86 YYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF-AG 143
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
Y+ L++ A + +IV+ +H R
Sbjct: 144 YRTLDSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|325000419|ref|ZP_08121531.1| hypothetical protein PseP1_16707 [Pseudonocardia sp. P1]
Length = 334
Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 21/166 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVLTGE----------PIRIERAF 54
L + ++ F SF+ Y V + P V +VVL R++RA
Sbjct: 127 IALLLLTVYVAFLFCSFLTYAVVYGRLAARPGVDFVVVLGAGLIRGKVTPLLRSRLDRAI 186
Query: 55 ELLENQIG----EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
L ++G + SG +++ + + Q + E + ++ T N
Sbjct: 187 ALRRREMGMGNDPVLVTSGGRGPDEPLAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENL 246
Query: 108 QEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + V +VT+++H+ RT L ++ Q + P
Sbjct: 247 TFSDRLMAGRVPRYRCV-VVTNNFHVFRTALLARQAGVDAQVLGSP 291
>gi|257089760|ref|ZP_05584121.1| predicted protein [Enterococcus faecalis CH188]
gi|256998572|gb|EEU85092.1| predicted protein [Enterococcus faecalis CH188]
Length = 359
Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P IVVL
Sbjct: 138 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPRYTQDYIVVLGSGLINGEIVPPLLQ 197
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 198 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 254
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 255 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 303
>gi|37679548|ref|NP_934157.1| hypothetical protein VV1364 [Vibrio vulnificus YJ016]
gi|37198292|dbj|BAC94128.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 212
Score = 42.2 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 18/122 (14%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVH-----------HSVSKDILL 80
V ++V+ +R+ E A L + I SG + + L
Sbjct: 19 RLTPVDCLLVMCSNDLRVAEHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELA 78
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLEL 138
+ + + I + K+ NT N + + + F ++V + R
Sbjct: 79 KASGVPAEA----ILLETKSSNTGENVRFSEQLLLEKGLAFESFILVQKPFMERRALATF 134
Query: 139 QR 140
++
Sbjct: 135 EK 136
>gi|74313520|ref|YP_311939.1| hypothetical protein SSON_3119 [Shigella sonnei Ss046]
gi|73856997|gb|AAZ89704.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 191
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 37 RIDTAAALYHVGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 96
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 97 VVRAKKVFGENHIT---IISQEFHNQRAI 122
>gi|16803044|ref|NP_464529.1| hypothetical protein lmo1004 [Listeria monocytogenes EGD-e]
gi|47096336|ref|ZP_00233932.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|224500750|ref|ZP_03669099.1| hypothetical protein LmonF1_14176 [Listeria monocytogenes Finland
1988]
gi|254898822|ref|ZP_05258746.1| hypothetical protein LmonJ_03375 [Listeria monocytogenes J0161]
gi|254911689|ref|ZP_05261701.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936015|ref|ZP_05267712.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284801336|ref|YP_003413201.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284994478|ref|YP_003416246.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|16410406|emb|CAC99082.1| lmo1004 [Listeria monocytogenes EGD-e]
gi|47015294|gb|EAL06231.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258608603|gb|EEW21211.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284056898|gb|ADB67839.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284059945|gb|ADB70884.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|293589638|gb|EFF97972.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 344
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 126 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ I Q + E I + ++
Sbjct: 186 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 246 VNTLQNMKFSKAKMDAIMSNYNSLFS-TNNFHLFRA 280
>gi|311899501|dbj|BAJ31909.1| hypothetical protein KSE_61430 [Kitasatospora setae KM-6054]
Length = 330
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 34/195 (17%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLEN- 59
L F F+ + ++ + V +VVL R++R L E
Sbjct: 135 LSFLFACFVGYAYLYGRLIPRED--VDYVVVLGAGLLDGSRVPPLLASRLDRGRRLYERQ 192
Query: 60 ---QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ +SG + + + + + I ++ TE N + + A
Sbjct: 193 VDRGRSPLLLVSGGKGGDEQLPEADAMAGYLVERGFPADRIVREDRSATTEENLRFSHAI 252
Query: 114 AEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS---------- 161
+ + V +VT+++H R + +R + P ++ +
Sbjct: 253 MAAADPDYRCV-VVTNNFHAFRAAVFARREGVRGHVVGSPTAAYFWPSATIREFVALIVV 311
Query: 162 -SIFKIKILRVLLIE 175
+ ++ +L+ E
Sbjct: 312 YRWANLAVIALLVAE 326
>gi|229058345|ref|ZP_04196730.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
gi|228720019|gb|EEL71608.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
Length = 159
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +++ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKLHDKTIAIVSGGQGKGEDITEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++Q++AE I + K+ +T+ N + N +IVT+D+HM R
Sbjct: 65 QGLMKQNIAEDRIIMEDKSTSTDENIKFLKPLIPAN-MKKGMIVTNDFHMFRA 116
>gi|85058944|ref|YP_454646.1| hypothetical protein SG0966 [Sodalis glossinidius str. 'morsitans']
gi|84779464|dbj|BAE74241.1| vancomycin resistance protein [Sodalis glossinidius str.
'morsitans']
Length = 262
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I Q + + + T +
Sbjct: 69 RIQGALNAYNSGKVSYLLLSGDNALQSYNEPVTMRRDLIAQGMPAADTVLDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R +N +Q Y + S
Sbjct: 129 IIRTRKVFDTNDFT---IITQRFHCERAL--FIALNMGIQAQCYAVPSPK 173
>gi|315037077|gb|EFT49009.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 344
Score = 42.2 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|329571598|gb|EGG53279.1| hypothetical protein HMPREF9520_02582 [Enterococcus faecalis
TX1467]
Length = 344
Score = 42.2 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|218902828|ref|YP_002450662.1| hypothetical protein BCAH820_1711 [Bacillus cereus AH820]
gi|218538682|gb|ACK91080.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 192
Score = 42.2 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 19/139 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFELLE 58
+ MGF+ + Y K + I+VL RI++A E L+
Sbjct: 15 MVCAVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLK 71
Query: 59 NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ +SG +S+ + ++ ++ +AE I + K+ +T+ N + +
Sbjct: 72 SHEKAIAIVSGGKGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIP 131
Query: 116 KNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 132 DN-MKKGMIVTNDFHMFRA 149
>gi|37676157|ref|NP_936553.1| hypothetical protein VVA0497 [Vibrio vulnificus YJ016]
gi|37200698|dbj|BAC96523.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 285
Score = 42.2 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 19/117 (16%)
Query: 46 EPIRIERAFELLENQI---GEKI-FISGVHHSVSKDI-------LLQKIPIRQDLAE-CC 93
R++ + + + G +I F G+ ++ Q+
Sbjct: 23 GVSRVDALVDAMASGKIEPGSRIAFCGGITQGQTRSEAIAMFDYFQQRCHANNLTFSAQN 82
Query: 94 IDIGYKALNTEGNAQEASAWAEKNN---FHHVLIVT---HDYHMPRTFLELQRINST 144
I + ++ +T N E S ++ VL VT +DYH+ R E+Q++
Sbjct: 83 ILLEERSTSTVENIFEVSRLLNQSGQCSAGSVLKVTFVSNDYHLKR-IFEIQQLMDE 138
>gi|152975455|ref|YP_001374972.1| hypothetical protein Bcer98_1670 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024207|gb|ABS21977.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 185
Score = 42.2 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + L K +SG + + ++ + + I I ++ +T
Sbjct: 56 QNRLDVALKYLNENPKTKAIVSGGQGEDEDIPEAHSMRNYLVAHGINANRILIEDRSTST 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H +IV++ YH+ RT
Sbjct: 116 YENLKFSKDLF---HITHAIIVSNTYHLYRT 143
>gi|238895711|ref|YP_002920446.1| hypothetical protein KP1_3812 [Klebsiella pneumoniae NTUH-K2044]
gi|238548028|dbj|BAH64379.1| vancomycin resistance protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 238
Score = 42.2 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I+ + I + Y T +
Sbjct: 69 RIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKGGVDPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q Y + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCYVVPSPK 173
>gi|328676916|gb|AEB27786.1| putative exported protein [Francisella cf. novicida Fx1]
Length = 231
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 27/211 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTGE---------- 46
+RYF L + G + I + +I + I++L
Sbjct: 26 LRYFIVALTIVYYLIANGVLGTILALPLKSESTNIKACENTKGIILLGAGINDAFGKLEP 85
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RI + E+ ++I ISG +S+ + + + + + I +
Sbjct: 86 ALSAYDRILKTAEVYHQ-YPQQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKN 144
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA+ N+ + +VT H R + + I +++
Sbjct: 145 SKNTYQNAEFIKKILM-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKI 203
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + I + ++ EYL I I++ LS+
Sbjct: 204 LPNSYNFYITQNIVHEYLGI----IRIYLSS 230
>gi|24114381|ref|NP_708891.1| hypothetical protein SF3126 [Shigella flexneri 2a str. 301]
gi|30064429|ref|NP_838600.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|24053550|gb|AAN44598.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042688|gb|AAP18411.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|281602471|gb|ADA75455.1| putative membrane protein [Shigella flexneri 2002017]
gi|313648419|gb|EFS12862.1| hypothetical protein SF2457T_3144 [Shigella flexneri 2a str. 2457T]
gi|332754353|gb|EGJ84719.1| hypothetical protein SF274771_3702 [Shigella flexneri 2747-71]
gi|333014857|gb|EGK34202.1| hypothetical protein SFK304_3931 [Shigella flexneri K-304]
Length = 230
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H RT
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRTI 161
>gi|290959775|ref|YP_003490957.1| hypothetical protein SCAB_53771 [Streptomyces scabiei 87.22]
gi|260649301|emb|CBG72416.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 183
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKD-------ILLQKIPIRQDLAECCIDIGYKALNT 103
+ EL + + +G ++D + + + I + A NT
Sbjct: 3 DATAELFHRGMAPAVLFTGATSRTTRDRMPRGEAEHYRDRAVELGVPASVILVEPNARNT 62
Query: 104 EGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + A E L+V+ Y R + +++ ++++
Sbjct: 63 GENIRFSRALLEARRIPVSSALLVSKPYEERRAYATARKLWPEIEWV 109
>gi|307717731|ref|YP_003873263.1| hypothetical protein STHERM_c00140 [Spirochaeta thermophila DSM
6192]
gi|306531456|gb|ADN00990.1| hypothetical protein STHERM_c00140 [Spirochaeta thermophila DSM
6192]
Length = 195
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 5 WYGLFVCLIFFIMGFIS-FIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQI 61
+ GL + + F ++ F ++ + +VV R ++ E+ E +
Sbjct: 6 FLGLLLYVGFVLIPFALRMPLRLEDFAVSARVEAPQVVVALEGEIIRRFKKGVEIAEKEG 65
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+FI V ++ L+ + I A +T +A+ ++ +
Sbjct: 66 IPLVFIPCVLLEDNR-EYLEDVSASNPPFSIVIGAEGSA-STYEDARITKSFLSERGLSK 123
Query: 122 VLIVTHDYHMPRTFLELQRIN 142
+LIVT YH RT L +R+
Sbjct: 124 ILIVTDWYHAWRTLLVFERVL 144
>gi|54309183|ref|YP_130203.1| putative SanA protein [Photobacterium profundum SS9]
gi|46913615|emb|CAG20401.1| Putative SanA protein [Photobacterium profundum SS9]
Length = 233
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A EL + +SG H S ++ +++ ++ + + I + Y T +
Sbjct: 69 RMEAALELYKQGKINVFLLSGDNAHRSYNEPWTMKRDLLKSGIPDSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A E ++F +I+T +H R
Sbjct: 129 VVRAKEVFEADHF---VIITQKFHCERALF 155
>gi|330829063|ref|YP_004392015.1| transporter [Aeromonas veronii B565]
gi|328804199|gb|AEB49398.1| Transporter [Aeromonas veronii B565]
Length = 367
Score = 41.8 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ EL + I ++G K L+ + + A +T
Sbjct: 216 GRLQTTLELAKADPEALIILTGGVPQNRKTEGKLMADWLANHGIDRSRLIEENYATSTVD 275
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA ++ ++ + ++V+ H+ R T LE+
Sbjct: 276 NALYSAYALARHQIDYAVLVSSASHVRRGQTVLEIA 311
>gi|171742688|ref|ZP_02918495.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
gi|171278302|gb|EDT45963.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
Length = 236
Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 18/145 (12%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
+ + I + V +M P + ++VL R+++A
Sbjct: 56 ILVALICIAVVAFGTVEGCIVSKMGAQGKPGLDYVIVL--GAQVHRARPSRVLKFRLDKA 113
Query: 54 FELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
E L + +SG S + +AE I K+ TE N +
Sbjct: 114 IEYLNDNPKTICIVSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINS 173
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTF 135
N V I+T+D+H+ R
Sbjct: 174 KKLIADEN-ASVGIITNDFHVFRAL 197
>gi|300769627|ref|ZP_07079511.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179587|ref|YP_003923715.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|300492780|gb|EFK27964.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045078|gb|ADN97621.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 340
Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQ 60
+F FI+++ + H + ++VL R++ A + Q
Sbjct: 137 TAYFAFSFIAYLLACVMTRLGRHRQIDYMIVLGAGLMPNGQPTRTLAYRLQTAAKYYRVQ 196
Query: 61 IGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-S 111
I +SG +++ +++ + Q + I ++ +T N + + +
Sbjct: 197 RARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHA 256
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ F+ +IVT YH+ R + ++++ +
Sbjct: 257 LIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLT 291
>gi|121605279|ref|YP_982608.1| hypothetical protein Pnap_2380 [Polaromonas naphthalenivorans CJ2]
gi|120594248|gb|ABM37687.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 253
Score = 41.8 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 21/147 (14%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERA 53
FW L + F + +Q IVVL R+ A
Sbjct: 68 FWLWLVS-----LGAFFGLLALRQQGQNLQGLRPEVIVVLGSSTPNAQPSPTLAERLNLA 122
Query: 54 FELLENQIGEKIFISG-VH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+ L + ++ +SG V +VS+ ++ + L + I + ++ +T N +
Sbjct: 123 YTLAQQHPKARVIVSGGVDFRQTVSEASVMATYLEAKGLDKSRILVEDRSTSTHENLVYS 182
Query: 111 SAWAEKNNFH---HVLIVTHDYHMPRT 134
+ ++VT D+H R
Sbjct: 183 LRLLQAGGQTPQAATVLVTSDFHTLRA 209
>gi|326333158|ref|ZP_08199406.1| oxidoreductase, short-chain dehydrogenase/reductase family
[Nocardioidaceae bacterium Broad-1]
gi|325949049|gb|EGD41141.1| oxidoreductase, short-chain dehydrogenase/reductase family
[Nocardioidaceae bacterium Broad-1]
Length = 279
Score = 41.8 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCID 95
+VVLTG I RA L G ++ +S V+ + L ++ R+ A+
Sbjct: 6 DKVVVLTGAGSGIGRALALNLAGRGARLALSDVNEAGLAETVELAKQAGAREIKADKLDV 65
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+A A+ +F V +V ++
Sbjct: 66 ADREAFT-----AYAADVIA--HFGTVNVVINN 91
>gi|218709993|ref|YP_002417614.1| hypothetical protein VS_2012 [Vibrio splendidus LGP32]
gi|218323012|emb|CAV19189.1| hypothetical protein VS_2012 [Vibrio splendidus LGP32]
Length = 225
Score = 41.8 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 34/122 (27%), Gaps = 10/122 (8%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGV-------HHSVSKDILLQKIP 84
D I VL R+ A EL + I SG S+ I
Sbjct: 35 DITPSDCIFVLCSNDTRVAEYAAELYHQGVAPYIVFSGGLGRFTEGSFERSEAETFAAIA 94
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRIN 142
+ + I I A NT N + + + +V + RT+ +
Sbjct: 95 RDAGVPDSDIIIEKHATNTGENVRFTHKLLTERGLSPKRLTLVQKPFMEKRTYATFAKQW 154
Query: 143 ST 144
Sbjct: 155 PD 156
>gi|328469464|gb|EGF40410.1| hypothetical protein VP10329_11286 [Vibrio parahaemolyticus 10329]
Length = 365
Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + AI++LTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDAIIILTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIA 309
>gi|323165039|gb|EFZ50829.1| hypothetical protein SS53G_4502 [Shigella sonnei 53G]
Length = 203
Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 49 RIDTAAALYHVGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 108
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 109 VVRAKKVFGENHIT---IISQEFHNQRAI 134
>gi|297623587|ref|YP_003705021.1| hypothetical protein Trad_1356 [Truepera radiovictrix DSM 17093]
gi|297164767|gb|ADI14478.1| protein of unknown function DUF218 [Truepera radiovictrix DSM
17093]
Length = 176
Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++RAFEL E EKI ++G ++ + + + E + K+ ++
Sbjct: 48 ARRLDRAFELYEAGCAEKILVTGGKRPGDRFTEGEAGVRYLAARGVPETALLKETKSRSS 107
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
N + + VLIVT D H RT Q + P L
Sbjct: 108 LQNLRYSLPLVRGE---RVLIVTDDLHTYRTGFLAQELGLDATVTGVPTKGPRLP 159
>gi|90410373|ref|ZP_01218389.1| Putative SanA protein [Photobacterium profundum 3TCK]
gi|90328614|gb|EAS44898.1| Putative SanA protein [Photobacterium profundum 3TCK]
Length = 226
Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A EL + +SG H S ++ +++ ++ + + I + Y T +
Sbjct: 69 RMEAALELYQQGKINVFLLSGDNAHRSYNEPWTMKRDLLKSGIPDSDIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A E ++F +I+T +H R
Sbjct: 129 VVRAKEVFEADHF---VIITQKFHCERALF 155
>gi|311280166|ref|YP_003942397.1| hypothetical protein Entcl_2865 [Enterobacter cloacae SCF1]
gi|308749361|gb|ADO49113.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 259
Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 49 RIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ L + G ++ +G + + + + I + +TE
Sbjct: 108 RLTEGVRLWQANPGARLIFTGAAARTNPVSTAEAGARVAESLGVPRSAIIVLE-TPKDTE 166
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
EA+A L+VT H+PR + + P ++ + N
Sbjct: 167 E---EAAAVKATVGDAPFLLVTSASHLPRAMIFFRHAGLNPLPAPANQLAIESPLNPW 221
>gi|294781623|ref|ZP_06746959.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|307269476|ref|ZP_07550815.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|294451319|gb|EFG19785.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|306514096|gb|EFM82672.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|323480825|gb|ADX80264.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 344
Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 160 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 219
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 220 FAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 279
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 280 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 325
>gi|257085087|ref|ZP_05579448.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993117|gb|EEU80419.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 337
Score = 41.8 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|295096380|emb|CBK85470.1| Uncharacterized conserved protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 259
Score = 41.8 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 29/143 (20%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + +
Sbjct: 82 IVVLGGGYTWDPNWAPSSNLINNSLPRLNEGIRLWLANPGSKMIFTGAAAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +TE A F L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSAIITLDSP-KDTEEEAAAVKQAIGDVPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENS 161
++ P P ++ + ++
Sbjct: 198 EKQG----LHPLPAPANQMAIDA 216
>gi|251778604|ref|ZP_04821524.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082919|gb|EES48809.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 357
Score = 41.8 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 21/117 (17%)
Query: 38 SAIVVLTGE----------PIRIERAFELLENQIG----EKIFISGV---HHSVSKDILL 80
I+VL RIE+A + Q KI SG VS+ +
Sbjct: 175 DFIIVLGSGLIGDRVPPLLGSRIEKAIKFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFTM 234
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE---KNNFHHVLIVTHDYHMPRT 134
QK + + + + +++T N + + + E + + T++YH+ R
Sbjct: 235 QKYAVNKGIPIEDTILEDNSVSTLENMKFSKSIMENLMPEGYRSIFT-TNNYHLFRA 290
>gi|331659378|ref|ZP_08360320.1| conserved hypothetical protein [Escherichia coli TA206]
gi|315297783|gb|EFU57057.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|331053960|gb|EGI25989.1| conserved hypothetical protein [Escherichia coli TA206]
Length = 230
Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|306816561|ref|ZP_07450693.1| putative thioredoxin-like protein [Escherichia coli NC101]
gi|305850126|gb|EFM50585.1| putative thioredoxin-like protein [Escherichia coli NC101]
Length = 230
Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|262164189|ref|ZP_06031927.1| hypothetical protein VMA_000631 [Vibrio mimicus VM223]
gi|262026569|gb|EEY45236.1| hypothetical protein VMA_000631 [Vibrio mimicus VM223]
Length = 287
Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 18/116 (15%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--------CI 94
R++ A + EN +F GV + + Q + +
Sbjct: 24 GKSRVDGLLSALQCHENSSALIVFCGGVTVGQTVSEAQRMHEYFQQQVQQKGLLLQHVDV 83
Query: 95 DIGYKALNTEGNAQEASA-WAEKNNFH-----HVLIVTHDYHMPRTFLELQRINST 144
+ ++ +T N + + H + +V+ DYH+ R E+Q +
Sbjct: 84 LLEQQSTSTVENIEHLAHVLLASQRLHAGETLSLTLVSSDYHLKR-IFEIQDLMDE 138
>gi|120403947|ref|YP_953776.1| hypothetical protein Mvan_2964 [Mycobacterium vanbaalenii PYR-1]
gi|119956765|gb|ABM13770.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 233
Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIGYKALNTEGN 106
R+ + I ++G + K Q + + + + I + +A +T N
Sbjct: 105 RVLAGMAVGHMFPQSPIIVTGGNPRNGKTEARQMRNMLRLYGIPDERIIVEDRANSTVQN 164
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A + A++ +++VT H R V
Sbjct: 165 AAFSVPLAKQAGTTGIILVTSSSHQDRADGNFADAGGNV 203
>gi|307277497|ref|ZP_07558589.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
gi|306505762|gb|EFM74940.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
Length = 401
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +FI Y V ++ + P IVVL
Sbjct: 180 WLSLPLTIAPFILTYFAFIFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|296393440|ref|YP_003658324.1| hypothetical protein Srot_1020 [Segniliparus rotundus DSM 44985]
gi|296180587|gb|ADG97493.1| protein of unknown function DUF218 [Segniliparus rotundus DSM
44985]
Length = 344
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+++ +L I ++G ++ + + Q + + ++ +T
Sbjct: 199 ERLKKTLDLALADPEASIIVTGGKPQNGLTEADAMADWLVGQGVDPARVHKEDRSASTVQ 258
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---QRINSTVQFIPYPIISHD 156
NA +++ +++VT H R LEL ++ I +
Sbjct: 259 NALNSASILRSLKPSQLVVVTSANHARRASALLELVAQTALDPGFDLISVASVDPA 314
>gi|256959075|ref|ZP_05563246.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|257079106|ref|ZP_05573467.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256949571|gb|EEU66203.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256987136|gb|EEU74438.1| conserved hypothetical protein [Enterococcus faecalis JH1]
Length = 337
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 31 IPDHPSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGV---HHSVSKD 77
IP +V I+VL R+++ E E K +SG V++
Sbjct: 153 IPLKKAVDYIIVLGSGIRSEEVPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEA 212
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGN-----AQEASAWAE---KNNFHHVLIVTHDY 129
++K + Q++ I + ++ T N A + W + + V+ T++Y
Sbjct: 213 FAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNY 272
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
H+ R + R+ + + P + L L+ EY+ +L+ ++
Sbjct: 273 HVLRGAMYAHRVGLKAEGVGAPTALYFLPTA-----------LIREYIALLVHDKRI 318
>gi|191172218|ref|ZP_03033761.1| putative SanA protein [Escherichia coli F11]
gi|300977564|ref|ZP_07173964.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|190907528|gb|EDV67124.1| putative SanA protein [Escherichia coli F11]
gi|300308254|gb|EFJ62774.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|324008841|gb|EGB78060.1| hypothetical protein HMPREF9532_01443 [Escherichia coli MS 57-2]
gi|324012056|gb|EGB81275.1| hypothetical protein HMPREF9533_03948 [Escherichia coli MS 60-1]
Length = 230
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|126650479|ref|ZP_01722702.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
gi|126592635|gb|EAZ86634.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
Length = 191
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 59/162 (36%), Gaps = 16/162 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVL-----TGE------PIR 49
++ V + I+ +I + +++ + S + +++L G R
Sbjct: 3 KWLIRVGVVLIFIAIVLYIWLGKEIERGVEANADGSANYMIILGAKVKPGGVPSLSLKSR 62
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+E A L K+ +SG ++ +++ + + I ++ +T N
Sbjct: 63 LEEAVPYLVKYPQVKVIVSGGQGPDEDRTESSVMRDYLEQNGIDATRIIEEDQSTSTYEN 122
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ + IV++D+H+ R + ++ V +
Sbjct: 123 LVFSKELI-PKETKKITIVSNDFHLKRAKYLAESLDFEVDVV 163
>gi|60682122|ref|YP_212266.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|253567093|ref|ZP_04844544.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764260|ref|ZP_06092828.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|60493556|emb|CAH08343.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251944217|gb|EES84726.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263256868|gb|EEZ28214.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 212
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I +SG + S + ++K I + + I + Y L T +
Sbjct: 69 RIKAATELYNAGKVKYILVSGDNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGLRTLDS 128
Query: 107 AQEASAWAEKN---NFHHVLIVTHDYHMPRTFL 136
+ +++ +H R
Sbjct: 129 V------VRAHLIFGLERFTLISQQFHNERAIY 155
>gi|238799250|ref|ZP_04642697.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
gi|238716915|gb|EEQ08784.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
Length = 253
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVSYLLLSGDNALQSYNEPMTMRRDLIAAGVAPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|269959273|ref|ZP_06173657.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835975|gb|EEZ90050.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 365
Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIA 309
>gi|237719439|ref|ZP_04549920.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293370232|ref|ZP_06616792.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|299146199|ref|ZP_07039267.1| SanA protein [Bacteroides sp. 3_1_23]
gi|229451299|gb|EEO57090.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292634729|gb|EFF53258.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|298516690|gb|EFI40571.1| SanA protein [Bacteroides sp. 3_1_23]
Length = 214
Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI EL + + I ISG + ++ ++K I++ + E I + Y T +
Sbjct: 69 RILATVELYKAGKIKYILISGDNRKEDYNEPEEMKKALIQKGIPEKFIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A +N I++ +H R
Sbjct: 129 VVRAKEVFGQNRLT---IISQRFHNERAIY 155
>gi|258622659|ref|ZP_05717679.1| hypothetical protein VMD_27250 [Vibrio mimicus VM573]
gi|258585036|gb|EEW09765.1| hypothetical protein VMD_27250 [Vibrio mimicus VM573]
Length = 294
Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 18/116 (15%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--------CI 94
R++ A + EN +F GV + + Q + +
Sbjct: 31 GKSRVDGLLSALQCHENSSALIVFCGGVTAGQTVSEAQRMHEYFQQQVQQKGLVLQHVDV 90
Query: 95 DIGYKALNTEGNAQEASA-WAEKNNFH-----HVLIVTHDYHMPRTFLELQRINST 144
+ ++ +T N + + H + +V+ DYH+ R +E+Q +
Sbjct: 91 LLEQQSTSTVENIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR-IIEIQDLMDE 145
>gi|213053169|ref|ZP_03346047.1| hypothetical protein Salmoneentericaenterica_09720 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419445|ref|ZP_03352511.1| hypothetical protein Salmonentericaenterica_17201 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427543|ref|ZP_03360293.1| hypothetical protein SentesTyphi_19281 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582272|ref|ZP_03364098.1| hypothetical protein SentesTyph_14144 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213646888|ref|ZP_03376941.1| hypothetical protein SentesTy_06019 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857319|ref|ZP_03384290.1| hypothetical protein SentesT_19260 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289826173|ref|ZP_06545285.1| hypothetical protein Salmonellentericaenterica_12365 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 134
Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEPI---------RI 50
+R + + + FI I+ ++ +Q AIV G R+
Sbjct: 7 LRIAAGIILIMAMVFIHNAIAIYQFSQQNQT---RVADCAIVAGAGVSGKTPSPVFQARL 63
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + I + ++G + +VS + ++ + + + I I ++ T N
Sbjct: 64 DHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENI 123
Query: 108 QEASAWAEKNN 118
+ A + +
Sbjct: 124 RYAKQILRQQH 134
>gi|207858479|ref|YP_002245130.1| hypothetical protein SEN3064 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206710282|emb|CAR34640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 230
Score = 41.8 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAI---------VVLTGEPI------RIERA 53
C + G F ++ H + + I +VL +P RI A
Sbjct: 21 VACFLLVAAGVALFYSNWLIVNASQHLTWNGIQTVPARNVGLVLGAKPGNRYFTRRINTA 80
Query: 54 FELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L + + +SG + + +Q+ I + + E I Y +T + A
Sbjct: 81 AALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDSVVRAR 140
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
+ + I++ +H R
Sbjct: 141 ---KVFGESRITIISQAFHNQRAI 161
>gi|301163592|emb|CBW23143.1| putative transport-related membrane protein [Bacteroides fragilis
638R]
Length = 212
Score = 41.8 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I +SG + S + ++K I + + I + Y L T +
Sbjct: 69 RIKAATELYNAGKVKYILVSGDNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGLRTLDS 128
Query: 107 AQEASAWAEKN---NFHHVLIVTHDYHMPRTFL 136
+ +++ +H R
Sbjct: 129 V------VRAHLIFGLERFTLISQQFHNERAIY 155
>gi|261414470|ref|YP_003248153.1| hypothetical protein Fisuc_0056 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370926|gb|ACX73671.1| hypothetical protein Fisuc_0056 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 329
Score = 41.8 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 10/114 (8%)
Query: 40 IVVLTGEP---IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAE--C 92
+ +L G+ R + A LL + + I G V+ S ++ +
Sbjct: 56 VAILDGQSADLERSDFAANLLNEGQADSVLILGRRVYRDRSNSEYYADDFMKLGAFDSNA 115
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD---YHMPRTFLELQRINS 143
+ + +T A W +K+N VL++T Y + R F +L +
Sbjct: 116 VFLVPHNDPSTISEAYSLVPWLKKHNADTVLLLTSAASTYRVKRIFQKLSGNSP 169
>gi|294635520|ref|ZP_06714000.1| protein SanA [Edwardsiella tarda ATCC 23685]
gi|291091089|gb|EFE23650.1| protein SanA [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 41.8 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 70 RIQGALNAYNSGKVSYLLLSGDNALQSYNEPVTMRRDLIAAGVPSSDIVLDYAGFRTLDS 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ N+F I+T +H R
Sbjct: 130 IVRTRRVFDTNDFT---IITQRFHCERALF 156
>gi|289549962|ref|YP_003470866.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
gi|289179494|gb|ADC86739.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
Length = 334
Score = 41.8 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 47 PIRIERAFELLENQIGEK--IFISGV--HHSVSKDIL-LQKIPIRQDLAECCIDIGYKAL 101
RI E+ + Q ++ +SG + + + +++ + + + E I ++
Sbjct: 179 ASRINAGLEIYQKQNNKQHLFLVSGGQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSK 238
Query: 102 NTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFL 136
T N + E + ++LI T+D+H+ R
Sbjct: 239 TTYENLYFSKKMIENLPLNKPNILICTNDFHILRAMF 275
>gi|156741130|ref|YP_001431259.1| hypothetical protein Rcas_1144 [Roseiflexus castenholzii DSM 13941]
gi|156232458|gb|ABU57241.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 196
Score = 41.8 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 19/138 (13%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT--EGNAQ 108
+ A L + ++ ++G L + I Q L + + + A NT G +
Sbjct: 74 DHAINLYRRGMVSRMILTG---DSMFVALARPYLIDQGLPQQALLL---AENTSLVGGIR 127
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DLEENSSIFKI 166
A+ A V+IV P L ++ Y + E
Sbjct: 128 AAANLARIQGISSVVIVAE----PPMMLTALKVARDEGLTGYGSSPGVVSVVEKPYAVAD 183
Query: 167 KILRVLLIEYLKILLLSI 184
R YLK + I
Sbjct: 184 GTWR-----YLKYVFAGI 196
>gi|53713914|ref|YP_099906.1| hypothetical protein BF2622 [Bacteroides fragilis YCH46]
gi|52216779|dbj|BAD49372.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 212
Score = 41.8 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I +SG + S + ++K I + + I + Y L T +
Sbjct: 69 RIKAATELYNAGKVKYILVSGDNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGLRTLDS 128
Query: 107 AQEASAWAEKN---NFHHVLIVTHDYHMPRTFL 136
+ +++ +H R
Sbjct: 129 V------VRAHLIFGLERFTLISQQFHNERAIY 155
>gi|225027612|ref|ZP_03716804.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
gi|224955068|gb|EEG36277.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
Length = 250
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A LE + +SG +S+ + + ++ + I K+ +T
Sbjct: 120 RERLDAALIYLEENPNSQCIVSGGMGEGEKISEAECMYRYLTKKGINSSRIIKEDKSTST 179
Query: 104 EGNAQEASAWAEKNNFHH-VLIVTHDYHMPRT 134
N + + E+ + + I T +YH R
Sbjct: 180 RENLRFSKKIMEEKGLGNNIAIATSEYHQYRA 211
>gi|157273409|gb|ABV27308.1| conserved hypothetical protein [Candidatus Chloracidobacterium
thermophilum]
Length = 256
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 16/148 (10%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ L ++ SG V +++ ++ I + NT
Sbjct: 114 RLVEGIRLHRLLPSARLVTSGGAVFTMRPAGEVMRDAACALGVSADRIVVQPIGRNTVEE 173
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF-- 164
+ E+ F L+VT HMPR ++ ++ +P P E +
Sbjct: 174 VAAVARLVEQEPF---LLVTSAVHMPRALEACRK--QGLRPLPAPTDFQATEPDGVWTPG 228
Query: 165 ----KIKILR---VLLIEYLKILLLSIQ 185
LR + EYL L ++
Sbjct: 229 DLYPSGAGLRQSERAMYEYLGHLRQRLR 256
>gi|148979911|ref|ZP_01815769.1| SanA protein [Vibrionales bacterium SWAT-3]
gi|145961515|gb|EDK26817.1| SanA protein [Vibrionales bacterium SWAT-3]
Length = 253
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A EL + + ++ +SG H S ++ +++ ++ + + I++ Y T
Sbjct: 86 KHRIEAAIELFDREKVDQFLLSGDNAHRSYNEPWTMKRDLLKAGVPDERINLDYAGFRTL 145
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 146 DSIVRAKKIFDTDNF---LIITQKFHCERALF 174
>gi|81429248|ref|YP_396249.1| hypothetical protein LSA1636 [Lactobacillus sakei subsp. sakei 23K]
gi|78610891|emb|CAI55943.1| Hypothetical protein LCA_1636 [Lactobacillus sakei subsp. sakei
23K]
Length = 277
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 29/217 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS--VSAIVVLTGE-----------P 47
+R F + + +I F +++ + P I+VL
Sbjct: 57 LRIFIGTISTVFLLYIPLFFYLYLSSLIIYLFNRPRYNQDYIIVLGSGLIDGQYVPPLLA 116
Query: 48 IRIERAFELL----ENQI-GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RIERA + K+ SG + + + +Q+ I + K
Sbjct: 117 SRIERAMTFYHRQVKKGRPAPKLVFSGGQGGDEKLPESVAMQRYAIDHGIPVEQTLTEEK 176
Query: 100 ALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP-----YP 151
++NT N Q + E + ++ T++YH R L ++ + I Y
Sbjct: 177 SVNTLQNMQFSKQIIEADTDKDKPRIIFSTNNYHTFRAGLFAKQAHLKADGIGAKTSKYF 236
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ + + E +I +K ++L + +L + + L
Sbjct: 237 LPNATIREFIAILSMKRHQLLFVTICSLLFAILAVLL 273
>gi|89074929|ref|ZP_01161379.1| Putative SanA protein [Photobacterium sp. SKA34]
gi|89049326|gb|EAR54889.1| Putative SanA protein [Photobacterium sp. SKA34]
Length = 248
Score = 41.8 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A +L + + +SG H S ++ +++ ++ + + I + Y T +
Sbjct: 69 RITAALDLYKQGKIDYFLLSGDNAHRSYNEPWTMKRDLLKAGVPDDKIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A E +NF I+T +H R
Sbjct: 129 IVRAKEVFEADNFT---IITQQFHCERALF 155
>gi|315503734|ref|YP_004082621.1| hypothetical protein ML5_2953 [Micromonospora sp. L5]
gi|315410353|gb|ADU08470.1| protein of unknown function DUF218 [Micromonospora sp. L5]
Length = 211
Score = 41.8 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E A +L + + +SG H + +++ + + + + + +T
Sbjct: 59 AARLEIARQLYAAGKVQVLLLSGDHMDWDYDEPDAMRRWLVERGVPAEKTVLDHAGFDTY 118
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +VT +H+PR
Sbjct: 119 DSCVRAH---RVFGVRRATVVTQSFHLPRAVA 147
>gi|302520985|ref|ZP_07273327.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429880|gb|EFL01696.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 223
Score = 41.4 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGVHHSVSKDILLQ--KIPIRQDL 89
+ + A + L + + A +L + + +G + S + + + +
Sbjct: 29 EPRACDAAIALGCNDLGVSTYAADLYRAGLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHA 88
Query: 90 AECCI-----DIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRIN 142
+ + +A NT N A VL+VT Y R F ++
Sbjct: 89 LALGVPAHAMLLEPRAANTGQNIAFARETLAAAGVRPRSVLLVTMPYMERRAFATFRKQW 148
Query: 143 STVQFI 148
V+ +
Sbjct: 149 PEVEVV 154
>gi|257789846|ref|YP_003180452.1| hypothetical protein Elen_0069 [Eggerthella lenta DSM 2243]
gi|257473743|gb|ACV54063.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 333
Score = 41.4 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Query: 29 MHIPDHPSVSAIVV----LTGE------PIRIERAFELLENQIGEKIFIS----GVHHSV 74
+P IVV L+G R+++A EL E + I+ G V
Sbjct: 150 RRLPKRRDYDYIVVHGAGLSGTKPTPLLAARLDKAVELWEADHRRAVIIASGGQGADEEV 209
Query: 75 SKDILLQKIPIRQD-LAECCIDIGYKALNTEGNAQEASAWAEKN---NFHHVLIVTHDYH 130
S+ ++ + + + + ++ T N + + A + + +VT DYH
Sbjct: 210 SEAEAMRTYLVEERGVPADAVIEENRSTTTMENLRNSKAIMDARSGAGAYRAAVVTSDYH 269
Query: 131 MPRT 134
+ RT
Sbjct: 270 VFRT 273
>gi|190149786|ref|YP_001968311.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256494|ref|ZP_07538275.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|189914917|gb|ACE61169.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864904|gb|EFM96806.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 229
Score = 41.4 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 37/162 (22%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS---------AIVVLT------GE 46
R + L I FI I Y +++ D+ A+V+ T G
Sbjct: 25 RIALVSFAIVLFLSIAIFI--IDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGT 82
Query: 47 PI-----RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCI 94
P R+E A +L+ +K+ +SG + V + L + I +++ E
Sbjct: 83 PNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
GY+ L++ A + +IV+ +H R
Sbjct: 142 -AGYRTLDSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|89893171|ref|YP_516658.1| hypothetical protein DSY0425 [Desulfitobacterium hafniense Y51]
gi|89332619|dbj|BAE82214.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 22/139 (15%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++ +L K+ +SG + + + + I Q +A I ++ +T
Sbjct: 121 RERVDKGVGILAENPQMKVVVSGGQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTST 180
Query: 104 EGNAQEASAWAEK-NNFHH---VLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDL 157
N + + ++ F VL++T D+HM R+ E +N + P +
Sbjct: 181 MENFRFSRVLLDQLEGFDPAEPVLVITSDFHMFRSKILAERNGLNP----VGVPCSTP-- 234
Query: 158 EENSSIFKIKILRVLLIEY 176
+ L EY
Sbjct: 235 ----WYIRPNAY---LREY 246
>gi|296103078|ref|YP_003613224.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057537|gb|ADF62275.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 259
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 29/143 (20%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + +
Sbjct: 82 IVVLGGGYTWDPNWAPSSNLINNSLPRLNEGIRLWLANPGSKMIFTGAPAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +TE A F L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSAIITLDSP-KDTEEEAAAVKQAIGDVPF---LLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDLEENS 161
++ P P ++ + N+
Sbjct: 198 EKQG----LHPLPAPANQMAINA 216
>gi|224585025|ref|YP_002638824.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224469553|gb|ACN47383.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 230
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N I++ +H R
Sbjct: 136 VVRARKVFGENRIT---IISQAFHNQRAI 161
>gi|196033543|ref|ZP_03100955.1| conserved hypothetical protein [Bacillus cereus W]
gi|195993977|gb|EDX57933.1| conserved hypothetical protein [Bacillus cereus W]
Length = 192
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+ + MGF+ + Y K + I+VL R+++A E
Sbjct: 13 IIMVCVVYMGFLQYNIY-KHGQMNATYDADYIIVL--GSKVNGTKPSYSLQYRMDKAAEY 69
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L++ +SG +S+ + ++ ++ ++AE I + K+ +T+ N + +
Sbjct: 70 LKSHEKAIAIVSGGKGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPL 129
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
N +IVT+D+HM R
Sbjct: 130 IPDN-MKKGMIVTNDFHMFRA 149
>gi|165975902|ref|YP_001651495.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|303252686|ref|ZP_07338849.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|165876003|gb|ABY69051.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|302648654|gb|EFL78847.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
Length = 229
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 37/162 (22%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS---------AIVVLT------GE 46
R + L I FI I Y +++ D+ A+V+ T G
Sbjct: 25 RIALVSFAIVLFLSIAIFI--IDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAKGT 82
Query: 47 PI-----RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCI 94
P R+E A +L+ +K+ +SG + V + L + I +++ E
Sbjct: 83 PNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
GY+ L++ A + +IV+ +H R
Sbjct: 142 -AGYRTLDSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|90579756|ref|ZP_01235565.1| Putative SanA protein [Vibrio angustum S14]
gi|90439330|gb|EAS64512.1| Putative SanA protein [Vibrio angustum S14]
Length = 248
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A +L + + +SG H S ++ +++ ++ + + I + Y T +
Sbjct: 69 RITAALDLFKQGKIDYFLLSGDNAHRSYNEPWTMKRDLLKAGVPDDKIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A E +NF I+T +H R
Sbjct: 129 IVRAKEVFETDNFT---IITQQFHCERALF 155
>gi|27368018|ref|NP_763545.1| hypothetical protein VV2_1678 [Vibrio vulnificus CMCP6]
gi|27359591|gb|AAO08535.1| hypothetical protein VV2_1678 [Vibrio vulnificus CMCP6]
Length = 285
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 38/190 (20%)
Query: 46 EPIRIERAFELLENQI---GEKI-FISGVHHSVSKDI-------LLQKIPIRQDLAE-CC 93
R++ + + + G +I F G+ ++ Q+
Sbjct: 23 GVSRVDALVDAMASGKIEPGSRIAFCGGITQGQTRSEAIAMFDYFQQRCHANNLTFSAQN 82
Query: 94 IDIGYKALNTEGNAQEASAWAEKNN---FHHVLIVT---HDYHMPRTFLELQRINSTVQF 147
I + ++ +T N E S ++ VL VT +DYH+ R E+Q++
Sbjct: 83 ILLEERSTSTVENIFEVSRLLIQSGQCSTGSVLKVTFVSNDYHLKR-IFEIQQLMDEQGL 141
Query: 148 I--------PYPI---ISHDLEENSSIFKIK-----ILRVLLIE---YLKILLLSIQLSL 188
+ + + I HDLE + S+ L +L+ E Y L +
Sbjct: 142 LRVLRERCAQHGVHLDIHHDLEAHVSVPYPNVGGEAQLFLLIDELTTYRVYLEGVARGVF 201
Query: 189 STQTASQFFI 198
I
Sbjct: 202 QRPLKEVRRI 211
>gi|315302477|ref|ZP_07873325.1| integral membrane protein [Listeria ivanovii FSL F6-596]
gi|313629156|gb|EFR97441.1| integral membrane protein [Listeria ivanovii FSL F6-596]
Length = 344
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 6 YGLFVCLIFFIMGFISFIR-------YVKQMHIPDHPSVSAIVV---LTGE-------PI 48
G+ + I ++G+ SF+ ++ Q P + IV+ L G
Sbjct: 126 LGILIVFIMTVVGYFSFLFLSFLLSTFIYQYSFPRYNQDFLIVLGSGLIGGDRVSPLLAS 185
Query: 49 RIERAF-----ELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R++RA +L++ +SG + ++S+ ++ I + + E I + K+
Sbjct: 186 RLDRAISFYQKQLMKKGKRATFIVSGGQGTNETISEAEAMRGYLISKGIDETFIIMENKS 245
Query: 101 LNTEGNAQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRIN 142
+NT N Q + + +++ + T+++H+ R L ++
Sbjct: 246 VNTLQNMQFSKKKMDVIMPDYNSLFS-TNNFHLFRASLYARKAG 288
>gi|167770124|ref|ZP_02442177.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
gi|167667756|gb|EDS11886.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
Length = 396
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 21/151 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMH-----IPDHPSVSAIVVLTGEPI--------- 48
+ W L V + + V + P +VVL G
Sbjct: 199 WRWLRLAVSFVLAAAVLTGAVLSVLMIRYAWFMPPRAGESYTVVVL-GSQSVNGKPSQIL 257
Query: 49 --RIERAFELLENQIGEKIFISG-VHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNT 103
R++ A+ L + ++G V + ++ I + L I + ++ NT
Sbjct: 258 RLRLDAAYTYLAAHSDTPVVVTGGVDRGETISEAVAMRDYLIARGLPADRIYMEDQSRNT 317
Query: 104 EGNAQEASAWAEKNNF-HHVLIVTHDYHMPR 133
N + A + +LIVT +H R
Sbjct: 318 LENLRFAGELITHEDLPRQLLIVTDGFHQLR 348
>gi|198242619|ref|YP_002217203.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|197937135|gb|ACH74468.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 230
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGERRITIISQAFHNQRAI 161
>gi|86147499|ref|ZP_01065810.1| SanA protein [Vibrio sp. MED222]
gi|85834667|gb|EAQ52814.1| SanA protein [Vibrio sp. MED222]
Length = 278
Score = 41.4 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A EL + + ++ +SG H S ++ +++ ++ + + I++ Y T
Sbjct: 83 KHRIEAAIELFDREKVDQFLLSGDNAHRSYNEPWTMKRDLLKAGVPDERINLDYAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 143 DSIVRAKKIFDTDNF---LIITQKFHCERALF 171
>gi|320158291|ref|YP_004190669.1| hypothetical protein VVM_00951 [Vibrio vulnificus MO6-24/O]
gi|319933603|gb|ADV88466.1| hypothetical protein VVMO6_03444 [Vibrio vulnificus MO6-24/O]
Length = 285
Score = 41.4 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 38/190 (20%)
Query: 46 EPIRIERAFELLENQI---GEKI-FISGVHHSVSKDI-------LLQKIPIRQDLAE-CC 93
R++ E + + G +I F G+ ++ Q+
Sbjct: 23 GVSRVDALVEAMASGKIEPGSRIAFCGGITQGQTRSEAIAMFDYFQQRCHANNLTFSAQN 82
Query: 94 IDIGYKALNTEGNAQEASAWAEKNN---FHHVLIVT---HDYHMPRTFLELQRINSTVQF 147
I + ++ +T N E S ++ VL VT +DYH+ R E+Q++
Sbjct: 83 ILLEERSTSTVENIFEVSRLLIQSGQCSTGSVLKVTFVSNDYHLKR-IFEIQQLMDEQGL 141
Query: 148 I--------PYPI---ISHDLEENSSIFKIK-----ILRVLLIE---YLKILLLSIQLSL 188
+ + + I HDLE + S+ L +L+ E Y L +
Sbjct: 142 LRVLRERCAQHGVHLDIHHDLEAHVSVPYPNVGGEAQLFLLIDELTTYRVYLEGVARGVF 201
Query: 189 STQTASQFFI 198
I
Sbjct: 202 QRPLKEVRRI 211
>gi|160894200|ref|ZP_02074978.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
gi|156864233|gb|EDO57664.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
Length = 255
Score = 41.4 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 58/175 (33%), Gaps = 23/175 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAI-VVLTGE----------PIRIERAFE 55
G+ + ++ +GF + P + +VL R++ A++
Sbjct: 73 GIVLLIVLVAVGFAAAGTICMVRASKTAPKDETVMIVLGCGVNGDRPSLMLTERLDAAYD 132
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L +SG ++S+ + + + +A+ + ++ +T N +
Sbjct: 133 YLNTHEEVVGILSGGQGKGENISEAECMYRYLTEKGIAKERLYKEERSTSTRENLLYSKK 192
Query: 113 WAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
E+ + V+IVT+++H R I P + +
Sbjct: 193 IMEEEHLDFRVIIVTNEFHEYRA----SVIAEHTGITPSAVCGK----TAWWLLP 239
>gi|28377368|ref|NP_784260.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270200|emb|CAD63099.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 340
Score = 41.4 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQ 60
+F FI+++ + H + ++VL R++ A + Q
Sbjct: 137 TAYFAFSFIAYLLACVMTRLGRHRQIDYMIVLGAGLMPNGQPTRTLAYRLQAAAKYYRVQ 196
Query: 61 IGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-S 111
I +SG +++ +++ + Q + I ++ +T N + + +
Sbjct: 197 RARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHA 256
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ F+ +IVT YH+ R + ++++ +
Sbjct: 257 LIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLT 291
>gi|188590697|ref|YP_001920933.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188500978|gb|ACD54114.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 357
Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 21/117 (17%)
Query: 38 SAIVVLTGE----------PIRIERAFELLENQIG----EKIFISGV---HHSVSKDILL 80
I+VL RI++A E Q KI SG VS+ +
Sbjct: 175 DFIIVLGSGLIGDRVPPLLASRIDKAIEFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFAM 234
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE---KNNFHHVLIVTHDYHMPRT 134
QK + + + I +++T N + + E + + T++YH+ R
Sbjct: 235 QKYAVNKGITIEDTIIEDNSVSTLENMKFSKNIMENLMPEGYRSIFT-TNNYHLFRA 290
>gi|154488709|ref|ZP_02029558.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
gi|154082846|gb|EDN81891.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
Length = 250
Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 16/145 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVL-----TGEPI-----RIERA 53
G+ + ++ + + + MH + +VVL P R++ A
Sbjct: 67 RGVIIAVVCIGIAIFGTVEGCIISNMHARGDQHLDYVVVLGAQVRKSGPSKALRYRLDTA 126
Query: 54 FELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+ L N +SG + + + E I K+ T+ N +
Sbjct: 127 ADYLRNSPDTICIVSGGKGANEPFPEAQGMADYLKAHGIEEGRILQESKSKTTQENIVNS 186
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTF 135
+N V I+T+D+HM R
Sbjct: 187 KKLIAGDN-ASVGIITNDFHMFRAL 210
>gi|84385174|ref|ZP_00988206.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
gi|84379771|gb|EAP96622.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
Length = 365
Score = 41.4 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 30/162 (18%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I ++ + A++VLTG + +H + L+
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL-- 138
I + +++ I A +T GNA +S +++ H I++ H+ R T E+
Sbjct: 251 WLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIAS 310
Query: 139 -QRINSTVQF--IPYPIIS-HDLEENSSIFKIKILRVLLIEY 176
Q + F + YP DL++ SS + I R L Y
Sbjct: 311 WQTGPQGITFDTVSYPDKPLEDLKKASSGELLGIYRDALRTY 352
>gi|254226453|ref|ZP_04920039.1| hypothetical protein VCV51_A0448 [Vibrio cholerae V51]
gi|125621015|gb|EAZ49363.1| hypothetical protein VCV51_A0448 [Vibrio cholerae V51]
Length = 317
Score = 41.4 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN+ +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENKAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLVDRCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|153876561|ref|ZP_02003819.1| sanA protein [Beggiatoa sp. PS]
gi|152066975|gb|EDN66181.1| sanA protein [Beggiatoa sp. PS]
Length = 169
Score = 41.4 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ +L + + I SG +H+ + + + + + Q + I + Y T
Sbjct: 23 RIDATVQLYKAGKIKHILASGTNHTKYYNEPNEMRKAL-MAQGVPREAITLDYAGFRTLD 81
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + +++++ +H R
Sbjct: 82 SVIRCKKIFSQ---TDIVVISQSFHNKRALF 109
>gi|46907236|ref|YP_013625.1| hypothetical protein LMOf2365_1025 [Listeria monocytogenes serotype
4b str. F2365]
gi|47094138|ref|ZP_00231859.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|226223622|ref|YP_002757729.1| hypothetical protein Lm4b_01024 [Listeria monocytogenes Clip81459]
gi|254823724|ref|ZP_05228725.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827949|ref|ZP_05232636.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254994315|ref|ZP_05276505.1| hypothetical protein LmonocytoFSL_16035 [Listeria monocytogenes FSL
J2-064]
gi|255521903|ref|ZP_05389140.1| hypothetical protein LmonocFSL_11877 [Listeria monocytogenes FSL
J1-175]
gi|46880503|gb|AAT03802.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017485|gb|EAL08297.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|225876084|emb|CAS04790.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600331|gb|EEW13656.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|293592945|gb|EFG00706.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 344
Score = 41.4 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 126 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ I + + E I + ++
Sbjct: 186 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 246 VNTLQNMKFSKAKMDAIMSNYNSLFS-TNNFHLFRA 280
>gi|56412371|ref|YP_149446.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56126628|gb|AAV76134.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 165
Score = 41.4 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEPI---------RI 50
+R + + + FI I+ ++ +Q AIV G R+
Sbjct: 38 LRIAAGIILIMAMVFIHNVIAIYQFSQQNQT---RVADCAIVAGAGVSGKTPSPVFQARL 94
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + I + ++G + +VS + ++ + + + I I ++ T N
Sbjct: 95 DHAIWLYQQHIIRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENI 154
Query: 108 QEASAWAEKNN 118
+ A + +
Sbjct: 155 RYAKQILRQQH 165
>gi|303235087|ref|ZP_07321710.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302493791|gb|EFL53574.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length = 308
Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 38 SAIVVLTGEPIRIERAFELLENQ----------IGEKIFISGV--HHSVSKDILLQKIPI 85
IVVL G ++ EL++ + + SG + + + + ++ I
Sbjct: 140 DYIVVL-GGSMKGIELSELIKQRMLTSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAI 198
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLELQRI 141
+ + I + A+NT N + ++ + + ++T+++H RT L ++
Sbjct: 199 ENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFVDKKICVITNNFHAFRTKLICNKM 258
Query: 142 NSTVQFIP 149
IP
Sbjct: 259 KVNWTVIP 266
>gi|238916610|ref|YP_002930127.1| hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
gi|238871970|gb|ACR71680.1| Hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
Length = 258
Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 9 FVCLIFFIMGFISFIRYVK--QMHIPDHPSVSAIVVL----TGE------PIRIERAFEL 56
F+ ++ FI + M + I+VL G+ R++ A
Sbjct: 75 FIVIMATGASLFIFIEALIIKGMMAKPKDNCDYIIVLGCQIRGDHITRSLKNRLDVAVSY 134
Query: 57 LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ I +SG + ++ + + + + I + +T N + + +
Sbjct: 135 AIDNPDTTIIVSGGRGKGENTTEAFAMYNYLVSKGIDGSRIIQEDNSTDTSENMKYSVQY 194
Query: 114 AEKNNFHHVL-IVTHDYHMPRTFLELQRINST 144
E N ++ IVT+++H+ R+ L +
Sbjct: 195 IE--NTDSLVGIVTNNFHIARSRLLARHAGLN 224
>gi|169823893|ref|YP_001691504.1| hypothetical protein FMG_0196 [Finegoldia magna ATCC 29328]
gi|167830698|dbj|BAG07614.1| putative membrane protein [Finegoldia magna ATCC 29328]
Length = 308
Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 38 SAIVVLTGEPIRIERAFELLENQ----------IGEKIFISGV--HHSVSKDILLQKIPI 85
IVVL G ++ EL++ + + SG + + + + ++ I
Sbjct: 140 DYIVVL-GGSMKGIELSELIKQRMLTSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAI 198
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLELQRI 141
+ + I + A+NT N + ++ + + ++T+++H RT L ++
Sbjct: 199 ENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFVDKKICVITNNFHAFRTKLICNKM 258
Query: 142 NSTVQFIP 149
IP
Sbjct: 259 KVNWTVIP 266
>gi|86145789|ref|ZP_01064118.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
gi|85836488|gb|EAQ54617.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
Length = 365
Score = 41.4 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 30/162 (18%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I ++ + A++VLTG + +H + L+
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL-- 138
I + +++ I A +T GNA +S +++ H I++ H+ R T E+
Sbjct: 251 WLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIAS 310
Query: 139 -QRINSTVQF--IPYPIIS-HDLEENSSIFKIKILRVLLIEY 176
Q + F + YP DL++ SS + I R L Y
Sbjct: 311 WQTGPQGITFDTVSYPDKPLEDLKKASSGELLGIYRDALRTY 352
>gi|290956634|ref|YP_003487816.1| hypothetical protein SCAB_21381 [Streptomyces scabiei 87.22]
gi|260646160|emb|CBG69253.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 221
Score = 41.4 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQDLAECCIDIGYKALNT 103
+ +L + I +G ++ + + + I + KA NT
Sbjct: 41 DTTADLYHRGMAPLIVFTGATSRTTRERMPRGEAEHYRDRAVELGVPASAIIVEPKARNT 100
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + A E+ VL+V+ Y R + +++ V+++
Sbjct: 101 GENIRLSRALLEEQRVPVSSVLLVSKPYEERRAYATARKLWPDVEWV 147
>gi|218691389|ref|YP_002399601.1| putative thioredoxin-like [Escherichia coli ED1a]
gi|218428953|emb|CAR09902.2| putative thioredoxin-like [Escherichia coli ED1a]
Length = 230
Score = 41.4 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + D +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAELYHAGKVKWLLVSGDNGRKNYDEAPGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|218676855|ref|YP_002395674.1| hypothetical protein VS_II1096 [Vibrio splendidus LGP32]
gi|218325123|emb|CAV26988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 365
Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 30/162 (18%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I ++ + A++VLTG + +H + L+
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL-- 138
I + +++ I A +T GNA +S +++ H I++ H+ R T E+
Sbjct: 251 WLISKGVSKDRIIEENYATSTVGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIAS 310
Query: 139 -QRINSTVQF--IPYPIIS-HDLEENSSIFKIKILRVLLIEY 176
Q + F + YP DL++ SS + I R L Y
Sbjct: 311 WQTGPQGITFDTVSYPDKPLEDLKKASSGELLGIYRDALRTY 352
>gi|213419370|ref|ZP_03352436.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 249
Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 56 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 115
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 116 VVRAR---KVFGESRITIISQAFHNQRAI 141
>gi|219666444|ref|YP_002456879.1| hypothetical protein Dhaf_0376 [Desulfitobacterium hafniense DCB-2]
gi|219536704|gb|ACL18443.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 258
Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 22/139 (15%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++ +L K+ +SG + + + + I Q +A I ++ +T
Sbjct: 122 RERVDKGVGILAENPQMKVVVSGGQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTST 181
Query: 104 EGNAQEASAWAEK-NNFHH---VLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDL 157
N + + ++ F VL++T D+HM R+ E +N + P +
Sbjct: 182 MENFRFSRVLLDQLEGFDPAEPVLVITSDFHMFRSKILAERNGLNP----VGVPCSTP-- 235
Query: 158 EENSSIFKIKILRVLLIEY 176
+ L EY
Sbjct: 236 ----WYIRPNAY---LREY 247
>gi|269102596|ref|ZP_06155293.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162494|gb|EEZ40990.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 224
Score = 41.4 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + +SG + S + +++ ++ + + I + Y T +
Sbjct: 69 RIQAALELYKQDKINVFLLSGDNRHRSYNEPWTMKRDLLKAGVPDNEIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A E N+F +I+T +H R
Sbjct: 129 IVRAKKVFEANHF---VIITQKFHCERALF 155
>gi|255531612|ref|YP_003091984.1| hypothetical protein Phep_1711 [Pedobacter heparinus DSM 2366]
gi|255344596|gb|ACU03922.1| protein of unknown function DUF218 [Pedobacter heparinus DSM 2366]
Length = 232
Score = 41.4 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 6/98 (6%)
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF--IPYP 151
I K+ N N EA N + + H Y R L L+R +V IP P
Sbjct: 108 IYTENKSKNIIENIVEAQKVYSFKNIRSMTFLAHSYATTRAALSLKRFFPSVMLHCIPLP 167
Query: 152 IISHDLE----ENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + L+ ++ EYL++ +
Sbjct: 168 LPTDYLKYPISRQMWWRTAYGRGLVWGEYLRLQTYGQR 205
>gi|254852499|ref|ZP_05241847.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300764214|ref|ZP_07074209.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
gi|258605808|gb|EEW18416.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300515204|gb|EFK42256.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
Length = 344
Score = 41.4 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 126 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ I + + E I + ++
Sbjct: 186 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 246 VNTLQNMKFSKAKMDAILSNYNSLFS-TNNFHLFRA 280
>gi|260900089|ref|ZP_05908484.1| transporter [Vibrio parahaemolyticus AQ4037]
gi|308110058|gb|EFO47598.1| transporter [Vibrio parahaemolyticus AQ4037]
Length = 365
Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + AI++LTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDAIIILTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIA 309
>gi|302520680|ref|ZP_07273022.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429575|gb|EFL01391.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 222
Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEG 105
+ EL + + +G + + + ++ I + I + +A NT
Sbjct: 49 SVELYRAGLFPTLVFTGGNSPTTAKVFPRGEAVHFREHAIDLGVPAEAILLEPEAGNTGQ 108
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N + V++V+ Y R+F +++ V+ + S LE + +
Sbjct: 109 NVTLSREVLAAAGITPTTVMLVSKPYMERRSFATARKLWPDVEIL---CASEPLEFDDYV 165
Query: 164 FKIKILRVLL----------IEYLKILLL 182
I +++L IEY K+
Sbjct: 166 KSIGDEKLVLDMLVGDLQRVIEYPKLGFA 194
>gi|28901535|ref|NP_801190.1| hypothetical protein VPA1680 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363086|ref|ZP_05775955.1| transporter [Vibrio parahaemolyticus K5030]
gi|260880373|ref|ZP_05892728.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|260894740|ref|ZP_05903236.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|28810082|dbj|BAC63023.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089437|gb|EFO39132.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|308092057|gb|EFO41752.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|308112354|gb|EFO49894.1| transporter [Vibrio parahaemolyticus K5030]
Length = 365
Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + AI++LTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDAIIILTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIA 309
>gi|163801450|ref|ZP_02195349.1| hypothetical protein 1103602000598_AND4_11294 [Vibrio sp. AND4]
gi|159174939|gb|EDP59739.1| hypothetical protein AND4_11294 [Vibrio sp. AND4]
Length = 365
Score = 41.4 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 22/111 (19%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I ++ + A++VLTG + +H + L+
Sbjct: 213 IERLETTLAMAQANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
I + +++ I A +T GNA +S ++N H I++ H+ R
Sbjct: 251 WLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRR 301
>gi|114765476|ref|ZP_01444586.1| hypothetical protein 1100011001321_R2601_10319 [Pelagibaca
bermudensis HTCC2601]
gi|114542186|gb|EAU45217.1| hypothetical protein R2601_10319 [Roseovarius sp. HTCC2601]
Length = 156
Score = 41.4 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 16/155 (10%)
Query: 39 AIVVLTGE------PIRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLA 90
V G R +RA L ++ I G H+ S+ ++ ++ +
Sbjct: 6 GAAVWPGGEPSPTLRRRAKRAVALWQSGEVGAILGCGGEGAHAPSEAEVICRLAREAGVP 65
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
E + ++ TE N + A E+ H V+IV+ YH+PR L +R+ +
Sbjct: 66 EEALFREDRSTTTEENLRFALPVLEEMGAHDVVIVSEAYHLPRALLVARRLGLRAR---- 121
Query: 151 PIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
R +L E + ++
Sbjct: 122 ----GAAPGLGGARMGAQARAMLREIPAFVWYWLR 152
>gi|300869552|ref|ZP_07114133.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332420|emb|CBN59331.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 351
Score = 41.4 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHH-----SVSKDILLQKIPIRQDLAECCIDIG 97
LT RI A L + + + +S + V + ++++ ++ + I +
Sbjct: 188 LTDAGDRIAYAARLYRHGLAPYLIVSAGYRPDLEGHVLEAADVKRLLVKMGVLPEDIILE 247
Query: 98 YKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRT 134
K+ N +A + +++VT M R
Sbjct: 248 TKSKNLHESAIQTRIILNNKGLGDRIILVTSAIQMGRA 285
>gi|318040918|ref|ZP_07972874.1| hypothetical protein SCB01_04389 [Synechococcus sp. CB0101]
Length = 183
Score = 41.4 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+Q +++SG + + + L ++ +A A T NA +AW +
Sbjct: 67 RDQDAAAVYVSG-DATSTAEALERQGVASDQIAG-----DSCARTTWENATHTAAWLRIH 120
Query: 118 N-FHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ VL++T + +PR +R VQ +
Sbjct: 121 HPLAPVLLITDPWQLPRATAAFRRQGLEVQPMA 153
>gi|39942836|ref|XP_360955.1| hypothetical protein MGG_03498 [Magnaporthe oryzae 70-15]
gi|145009948|gb|EDJ94604.1| hypothetical protein MGG_03498 [Magnaporthe oryzae 70-15]
Length = 260
Score = 41.4 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRI-ERAFELLENQIG--EKIFI----SGVHHSVS----K 76
+M++P H AI L R+ ERA +LL + + + I SG +
Sbjct: 21 RMNMPLHQPADAIFCLCSLDTRVAERAAQLLLDGFAGADGVLIFSGGSGKLTETRFSEPE 80
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRT 134
+ + R + I + ++ NT N + A ++V Y RT
Sbjct: 81 AEVFAAVARRMGVPPARILVEPRSSNTGENVRFTRALLRDRGLSPRSFILVQKPYMERRT 140
Query: 135 FLEL 138
+
Sbjct: 141 YATF 144
>gi|300722464|ref|YP_003711752.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
gi|297628969|emb|CBJ89554.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
Length = 240
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + + + ++K I+ + I + + T +
Sbjct: 69 RIQGAVNAYNSGKVKYLLLSGDNAQHNYNEPITMRKDLIKAGIPASNIVMDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ ++F I+T +H R L I+ ++ Y + S
Sbjct: 129 IIRTRKVFDTDDFT---IITQRFHCERAL--LIAIHFGIEAQCYAVPSPK 173
>gi|302869784|ref|YP_003838421.1| hypothetical protein Micau_5339 [Micromonospora aurantiaca ATCC
27029]
gi|302572643|gb|ADL48845.1| protein of unknown function DUF218 [Micromonospora aurantiaca ATCC
27029]
Length = 237
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E A +L + + +SG H + +++ + + + + + +T
Sbjct: 85 AARLEIARQLYAAGKVQVLLLSGDHMDWDYDEPDAMRRWLVERGVPAEKTVLDHAGFDTY 144
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +VT +H+PR
Sbjct: 145 DSCVRAH---RVFGVRRATVVTQSFHLPRAVA 173
>gi|153825737|ref|ZP_01978404.1| transporter [Vibrio cholerae MZO-2]
gi|149740576|gb|EDM54687.1| transporter [Vibrio cholerae MZO-2]
Length = 363
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E ++ + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLDMAKANPEAMIVLTGGVPQNHKTEGKLMADWLIERGVSAARIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
A +S ++ H I++ H+ R T E+
Sbjct: 273 ALYSSYALARHGIKHATIISSASHVRRGQTLFEIA 307
>gi|84391224|ref|ZP_00991555.1| sanA protein [Vibrio splendidus 12B01]
gi|84376513|gb|EAP93391.1| sanA protein [Vibrio splendidus 12B01]
Length = 266
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A EL + + ++ +SG H S ++ +++ ++ + + I++ Y T
Sbjct: 83 KHRIEAAIELFDREKVDQFLLSGDNAHRSYNEPWTMKRDLLKAGVPDERINLDYAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 143 DSIVRAKKIFDTDNF---LIITQKFHCERALF 171
>gi|229526278|ref|ZP_04415682.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297579775|ref|ZP_06941702.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|229336436|gb|EEO01454.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297535421|gb|EFH74255.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 363
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E ++ + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLDMAKANPEAMIVLTGGVPQNHKTEGKLMADWLIERGVSAARIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
A +S ++ H I++ H+ R T E+
Sbjct: 273 ALYSSYALARHGIKHATIISSASHVRRGQTLFEIA 307
>gi|113970950|ref|YP_734743.1| hypothetical protein Shewmr4_2615 [Shewanella sp. MR-4]
gi|113885634|gb|ABI39686.1| protein of unknown function DUF218 [Shewanella sp. MR-4]
Length = 244
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L+ + +SG ++ ++ K + + I +T
Sbjct: 105 RLTEGLRQLQLGQDCTLVVSGWEGELTQHPHAEVMAKAAVELGVDASRIVQLPLPRDTIE 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD-LEENSSIF 164
A + E V +VT HMPR+ T P + D +
Sbjct: 165 EAHY---FKEHFGNQAVRLVTSASHMPRSMAIFSGQGLTASAAPTDFRARDGFYWRLTAD 221
Query: 165 KIKILRVLLIEYLKILLLSIQ 185
+ + + EY+ L L I+
Sbjct: 222 NLLASQRAIHEYIGRLWLWIK 242
>gi|228997359|ref|ZP_04156981.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
gi|229004990|ref|ZP_04162717.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228756338|gb|EEM05656.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228762451|gb|EEM11376.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
Length = 168
Score = 41.4 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L + K+ +SG + + ++ I+ + E I I ++ +T
Sbjct: 39 QNRLDVALMYLNSHPETKVIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDRSTST 98
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 99 YENLKFSMDL---YHVMHAVVVSNTYHLYRT 126
>gi|205359861|ref|ZP_02832915.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205342506|gb|EDZ29270.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 178
Score = 41.4 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 87 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 146
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ + I I ++ T N + A + +
Sbjct: 147 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 178
>gi|54302701|ref|YP_132694.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
gi|46916125|emb|CAG22894.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
Length = 358
Score = 41.4 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 27/116 (23%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
A++++TG L + ++ ++ + Q ++E I
Sbjct: 217 ALIIVTGG---------LAKAGR-------------TESSAMKAWLVEQGISEDRIIEEN 254
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT-----FLELQRINSTVQFIP 149
KA NT NA+ + A K N +V+ H+ R+ L Q + P
Sbjct: 255 KATNTIDNARLSLALLAKYNIQTATLVSASIHVHRSHILFDILHWQNRLHNNKITP 310
>gi|229527925|ref|ZP_04417316.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
gi|229334287|gb|EEN99772.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
Length = 363
Score = 41.4 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E ++ + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLDMAKANPEAMIVLTGGVPQNHKTEGKLMADWLIERGVSAARIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
A +S ++ H I++ H+ R T E+
Sbjct: 273 ALYSSYALARHGIKHATIISSASHVRRGQTLFEIA 307
>gi|297559450|ref|YP_003678424.1| hypothetical protein Ndas_0471 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843898|gb|ADH65918.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 216
Score = 41.4 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R++ A +L + + ++G + + ++ + + I Y +T
Sbjct: 55 ARRLDTAADLYFAGKVDVVLVTGDNSVEHYNETDTMRAYLVDAGVPGEHIVGDYAGFSTW 114
Query: 105 GNAQEASAWAEKN---NFHHVLIVTHDYHMPRTF 135
+ + V +VT D+H+PR
Sbjct: 115 DSC------VRAHEVFGVREVTVVTQDFHLPRAV 142
>gi|218709194|ref|YP_002416815.1| hypothetical protein VS_1201 [Vibrio splendidus LGP32]
gi|218322213|emb|CAV18327.1| Protein sanA [Vibrio splendidus LGP32]
Length = 296
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RIE A EL + + ++ +SG H S ++ +++ ++ + + I++ Y T
Sbjct: 101 KHRIEAAIELFDREKVDQFLLSGDNAHRSYNEPWTMKRDLLKAGVPDERINLDYAGFRTL 160
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + +NF LI+T +H R
Sbjct: 161 DSIVRAKKIFDTDNF---LIITQKFHCERALF 189
>gi|302379893|ref|ZP_07268373.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302312282|gb|EFK94283.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
Length = 308
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 38 SAIVVLTGEPIRIERAFELLENQ----------IGEKIFISGV--HHSVSKDILLQKIPI 85
IVVL G ++ EL++ + + SG + + + + ++ I
Sbjct: 140 DYIVVL-GGSMKGIELSELIKQRMLTSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAI 198
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLELQRI 141
+ + I + A+NT N + ++ + + ++T+++H RT L ++
Sbjct: 199 ENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFEDKKICVITNNFHAFRTKLICNKM 258
Query: 142 NSTVQFIP 149
IP
Sbjct: 259 KVNWSVIP 266
>gi|153828978|ref|ZP_01981645.1| transporter [Vibrio cholerae 623-39]
gi|148875509|gb|EDL73644.1| transporter [Vibrio cholerae 623-39]
Length = 363
Score = 41.4 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E ++ + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLDMAKANPEAMIVLTGGVPQNHKTEGKLMADWLIERGVSAARIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
A +S ++ H I++ H+ R T E+
Sbjct: 273 ALYSSYALARHGIKHATIISSASHVRRGQTLFEIA 307
>gi|320084338|emb|CBY94131.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 118
Score = 41.0 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 27 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 86
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ + I I ++ T N + A + +
Sbjct: 87 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 118
>gi|260590748|ref|ZP_05856206.1| SanA protein [Prevotella veroralis F0319]
gi|260537234|gb|EEX19851.1| SanA protein [Prevotella veroralis F0319]
Length = 197
Score = 41.0 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH-SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL +N +++ ISG + ++K I + + I + T
Sbjct: 68 QARINAAVELYKNHKYKQLIISGEKRKGYDEPSAMKKNLIVRGIPANIIHMDGSGHRTF- 126
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
E+ + ++I++ +H R+ + Y + + + + +
Sbjct: 127 --LSMRNIQEEYHADSIIIISQKWHNQRSIYLADHLG------IYAVGYNAEDVHDFFAQ 178
Query: 166 IKILRVLL 173
+ +R LL
Sbjct: 179 LTHIRELL 186
>gi|332710420|ref|ZP_08430367.1| hypothetical protein LYNGBM3L_50940 [Lyngbya majuscula 3L]
gi|332350751|gb|EGJ30344.1| hypothetical protein LYNGBM3L_50940 [Lyngbya majuscula 3L]
Length = 239
Score = 41.0 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 12/123 (9%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAF-ELLENQIGEKIFISGV--H 71
F+ G++ ++ V VL G IR E EL + ++I IS
Sbjct: 2 FLCGWLL--INTLRLQAAASAPVDTFFVL-GGSIRREIHVAELAKQYPDKRILISHGSPD 58
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ + Q E C A +T GN + ++ V ++T H+
Sbjct: 59 PCIWLIFKREMASSEQVWLEKC------ANSTFGNFFFSIPIFQRWGVRKVKLITSGTHV 112
Query: 132 PRT 134
PR
Sbjct: 113 PRA 115
>gi|187736193|ref|YP_001878305.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426245|gb|ACD05524.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
Length = 217
Score = 41.0 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A EL ++ +SG + S ++ +++ + + + E I + L T
Sbjct: 66 NRMDTASELWKDGKATVFIVSGDNSSHAYNEPEWMKQALVERGVPEERIVCDFAGLRTLD 125
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ E +++V+ ++H R + P + + S F+
Sbjct: 126 S---VVRMKEIFGVSTMIVVSQEFHNERALAIAAHEGMAAWAVSAPDVPNRRSRMKSWFR 182
Query: 166 IKILRVLLI 174
+ RV ++
Sbjct: 183 ERAARVWMM 191
>gi|297580399|ref|ZP_06942326.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536045|gb|EFH74879.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 317
Score = 41.0 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN+ +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENKAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|111219782|ref|YP_710576.1| hypothetical protein FRAAL0286 [Frankia alni ACN14a]
gi|111147314|emb|CAJ58963.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 219
Score = 41.0 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 56 LLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L ++ +I +G + + ++ + ++ + I + A NT N
Sbjct: 50 LYHRRMFPRIVFTGANAPTTIATFPRGEAVHYREHALTLNVPDTAILVEPTARNTGENIT 109
Query: 109 EASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ V +++ Y R + +++ V
Sbjct: 110 RTRELLTAHGITPRSVTLISRPYQQRRAYATCRKLWPDVDV 150
>gi|238753400|ref|ZP_04614763.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
gi|238708353|gb|EEQ00708.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
Length = 244
Score = 41.0 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I +A I + Y T +
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIAAGVAPADIVLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F +I+T +H R ++ +Q + + S
Sbjct: 129 IVRTRKVFDTNDF---IIITQRFHCERAL--FIALHMGIQAQCFAVPSPK 173
>gi|312883604|ref|ZP_07743329.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368827|gb|EFP96354.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 242
Score = 41.0 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 19/140 (13%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RIE A +L + E +SG H S ++ +++ ++ ++ + I + Y T
Sbjct: 83 HRIEAAIQLYQKHKVENFLLSGDNAHRSYNEPWTMKRDLLKANIPKDKIFLDYAGFRTLD 142
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + +NF LI++ +H R + + + + +
Sbjct: 143 SIVRAKEIFDTDNF---LIISQKFHCERAI--FIANSHNIDAKCFAVPGP--------SR 189
Query: 166 IKILRVLLIEYLKILLLSIQ 185
LRV L E + +
Sbjct: 190 HSGLRVRLRE----VFARAR 205
>gi|54302360|ref|YP_132353.1| hypothetical protein PBPRB0680 [Photobacterium profundum SS9]
gi|46915782|emb|CAG22553.1| hypothetical protein PBPRB0680 [Photobacterium profundum SS9]
Length = 217
Score = 41.0 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 19/135 (14%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQ 87
I VL +R+ E A ++ I SG ++K +
Sbjct: 24 KSDCIFVLCSNDVRVAEHAAKIYLAGYAPYIVFSGGEGELTKGLFGCSEAEYFAHVAADM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR----- 140
+ I I ++ NT N Q E + +++V + RTF R
Sbjct: 84 GVPLEKILIEPQSTNTGENVQFTRELLESKDLTPNKMILVQKPFMERRTFATFVRQWPGK 143
Query: 141 ----INSTVQFIPYP 151
+ + F YP
Sbjct: 144 EVIVTSPDISFDEYP 158
>gi|307263104|ref|ZP_07544726.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306871730|gb|EFN03452.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 196
Score = 41.0 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ +K+ +SG + V + L + I +++ E GY+ L
Sbjct: 57 RLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF-AGYRTL 114
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 115 DSIVRASKV------YKLEPFIIVSQQFHCERALF 143
>gi|307249667|ref|ZP_07531652.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858300|gb|EFM90371.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 196
Score = 41.0 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ +K+ +SG + V + L + I +++ E GY+ L
Sbjct: 57 RLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF-AGYRTL 114
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 115 DSIVRASKV------YKLEPFIIVSQQFHCERALF 143
>gi|307247447|ref|ZP_07529493.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856063|gb|EFM88220.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 196
Score = 41.0 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ +K+ +SG + V + L + I +++ E GY+ L
Sbjct: 57 RLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF-AGYRTL 114
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 115 DSIVRASKV------YKLEPFIIVSQQFHCERALF 143
>gi|261251880|ref|ZP_05944454.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
gi|260938753|gb|EEX94741.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
Length = 365
Score = 41.0 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 24/154 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLQMAKDNPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQR 140
I + + + I A +T GNA +S ++N H I++ H+ R T E+
Sbjct: 251 WLIEKGIKKERIIEENYATSTVGNALFSSYALARHNIQHATIISSASHVRRGQTLFEIAS 310
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+ Q I + +S+ + + K +L I
Sbjct: 311 WQTGPQDITFDTVSYPDKPLKELTKASASELLGI 344
>gi|260557220|ref|ZP_05829436.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
gi|260409326|gb|EEX02628.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
Length = 178
Score = 41.0 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIERAFEL-LENQIGEKIFI 67
F +FI+ K + P+V AI+VL R++ A + L + I
Sbjct: 3 FFNFIKENKDAS-QNLPAVKAIIVLGSGVENGEPSAILAKRLDTAAPVALSQPQAKVILT 61
Query: 68 SGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF---HH 121
G+ S + + + + + + + + K+ +TE N + + E+ +
Sbjct: 62 GGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVNQP 121
Query: 122 VLIVTHDYHMPRTFL 136
+ IVT D+H PR
Sbjct: 122 IAIVTSDFHTPRAAA 136
>gi|254931387|ref|ZP_05264746.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293582938|gb|EFF94970.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328475355|gb|EGF46128.1| hypothetical protein LM220_00285 [Listeria monocytogenes 220]
gi|332311412|gb|EGJ24507.1| Integral membrane protein [Listeria monocytogenes str. Scott A]
Length = 344
Score = 41.0 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 126 LGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ + + + E I + ++
Sbjct: 186 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLLEKGIDENFIIMEDQS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +N++ + T+++H+ R
Sbjct: 246 VNTLQNMKFSKAKMDAIMSNYNSLFS-TNNFHLFRA 280
>gi|183221618|ref|YP_001839614.1| hypothetical protein LEPBI_I2242 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911697|ref|YP_001963252.1| hypothetical protein LBF_2177 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776373|gb|ABZ94674.1| conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780040|gb|ABZ98338.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 225
Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 36 SVSAIVVLTGEPIRIER-AFELLENQIGEKIFISG--------VHHSVSKDILLQKIPIR 86
I+VL +RI + A +L + + + I SG + S+ + I
Sbjct: 32 KSDLIIVLCSHDLRIAKYAVDLYKQGLAKYILFSGGLNFFTKHIFP-NSEAEAFANLAIS 90
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+++ + I I K+ NT N Q + N
Sbjct: 91 ENIPKEFIIIENKSSNTGENIQFSKQLLYSLNLK 124
>gi|298527828|ref|ZP_07015232.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511480|gb|EFI35382.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 256
Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 28/154 (18%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
+ +V TG R A L + + E I +
Sbjct: 123 PDSTLVFTGGRFRYPVAS----------------------SELAALASVELGIDENDILV 160
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+A +TE A A +F ++VT HM R+ + + P + D
Sbjct: 161 VAEAKDTEDEASLARDIVGDESF---VLVTSASHMHRSMIIFKSEGMDPIPSPTDFRAPD 217
Query: 157 LEENSSIFKIKILRVLLIE---YLKILLLSIQLS 187
N + + E Y ++ L +
Sbjct: 218 KLYNLWDYFPSAGALAKTERVFYERLGLAWAMIR 251
>gi|213865184|ref|ZP_03387303.1| hypothetical protein SentesT_35716 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 169
Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 15 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 74
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 75 VVRAR---KVFGESRITIISQAFHNQRAI 100
>gi|307260919|ref|ZP_07542605.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869486|gb|EFN01277.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 229
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ +K+ +SG + V + L + I +++ E GY+ L
Sbjct: 90 RLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLY-NMGIPKNMIEQDF-AGYRTL 147
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 148 DSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|291618091|ref|YP_003520833.1| SanA [Pantoea ananatis LMG 20103]
gi|291153121|gb|ADD77705.1| SanA [Pantoea ananatis LMG 20103]
Length = 252
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-------------MHIPDHPSVSAIVVL---- 43
+R +F+ L+F I+ ++ + + + H V VVL
Sbjct: 11 LRRMLKRVFIALLFIILTMVATALGLDRWISWKTAPYIYDNLASLPHRQVG--VVLGTAK 68
Query: 44 ---TGEPI-----RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECC 93
TG R++ A + + +SG + S + +++ I+ +
Sbjct: 69 YYRTGVINQYYLYRMQGALNAYNSGKVNYLLLSGDNAQQSYNEPMTMRRDLIKGGVDPAD 128
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I + Y T + + N+F +I+T +H R ++ +Q Y +
Sbjct: 129 IVLDYAGFRTLDSIVRTRKVFDTNDF---IIITQRFHCERAL--FIALHLGIQAQCYAVP 183
Query: 154 SHD 156
S
Sbjct: 184 SPK 186
>gi|300937981|ref|ZP_07152763.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300457022|gb|EFK20515.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 230
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDSAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|261253221|ref|ZP_05945794.1| SanA protein [Vibrio orientalis CIP 102891]
gi|260936612|gb|EEX92601.1| SanA protein [Vibrio orientalis CIP 102891]
Length = 253
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 8/118 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL +SG H S ++ +++ +R ++ E I + Y T
Sbjct: 82 SHRMDAAIELYNEGKVAHFLLSGDNAHRSYNEPWTMKRDLLRAEVPEEKIFLDYAGFRTL 141
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
+ A + +NF LI++ +H R + + + + +
Sbjct: 142 DSVVRAKEIFDTDNF---LIISQKFHCERAL--FIAKSHNINASCFAVPGPS-RHSGW 193
>gi|228991260|ref|ZP_04151218.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
gi|228768484|gb|EEM17089.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
Length = 185
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L + K+ +SG + + ++ I+ + E I I ++ +T
Sbjct: 56 QNRLDVALMYLNSHPETKVIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDRSTST 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YHVMHAVVVSNTYHLYRT 143
>gi|310287895|ref|YP_003939153.1| hypothetical protein [Bifidobacterium bifidum S17]
gi|309251831|gb|ADO53579.1| conserved hypothetical protein, domain DUF218 [Bifidobacterium
bifidum S17]
Length = 200
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 20/128 (15%)
Query: 47 PIRIERAFELLENQIGEKIFIS----GVHHSVSKDILLQKI-PIRQDLAECCIDIGYKAL 101
R+++ L E Q +F++ G VS+ +++ + + + + ++
Sbjct: 47 RGRVDKGVALWEKQGKTGVFVASGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRST 106
Query: 102 NTEGNAQEASAWAEKN-NFHHV----------LIVTHDYHMPRTFLELQRINSTVQFIPY 150
T N + + + V +VT DYH+ R +
Sbjct: 107 TTMENLRFSKEIMDARSGVQSVPGRRGLAYRCALVTSDYHVFRA----SEYAHHIGLKAD 162
Query: 151 PIISHDLE 158
+
Sbjct: 163 GVRQPYAW 170
>gi|253990372|ref|YP_003041728.1| hypothetical protein PAU_02897 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781822|emb|CAQ84985.1| sana protein [Photorhabdus asymbiotica]
Length = 258
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ +R + I + + T +
Sbjct: 81 RIQGAVNAYNSDKIKYLLLSGDNAQQSYNEPITMRRDLVRAGIPATNIVLDFAGFRTLDS 140
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ N+F I+T +H R ++ + Y + +
Sbjct: 141 IVRTRKVFDTNDFT---IITQRFHCERAL--FIAMHMGITAQCYAVSTPK 185
>gi|298491733|ref|YP_003721910.1| hypothetical protein Aazo_2992 ['Nostoc azollae' 0708]
gi|298233651|gb|ADI64787.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 232
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 28/187 (14%)
Query: 2 RYFWYGL---FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R W L L F + +++F + V +VL G R A +L +
Sbjct: 18 RKLWRLLQNIVFGLCFILFSWLTFT--TITLVSASSKPVDGFLVLGGSIRREIHAAQLAK 75
Query: 59 NQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
I IS I+ + + + E C A +T N
Sbjct: 76 QYPQIPILISQGSPDPCIWIIFQREAAHLEKVWLENC------AHSTFENFYNGVPILRN 129
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP--IISHDLEE-------NSSI-FKI 166
V ++T H R ++ + + + + + ++E S I ++
Sbjct: 130 WRVRKVKLITSGTHFFRA-----KLMAQIILGAHGIWVETETVKEIGIPGNRESWIKTEL 184
Query: 167 KILRVLL 173
I+R LL
Sbjct: 185 DIIRSLL 191
>gi|188589627|ref|YP_001922120.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188499908|gb|ACD53044.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 348
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PI 48
++ G+ L++++ +F I ++ Q + P I+VL
Sbjct: 127 VKVLLGGINFILLYYLFDVFNFLMISFLYQFNKPKLCQ-DFIIVLGSGLIGERVPPLLAS 185
Query: 49 RIERAFELLENQIG----EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI++A E Q KI SG +S+ + +Q+ ++ + + K++
Sbjct: 186 RIDKAIEFYNKQSTVTNPPKIIFSGGQGSDEKISEALAMQRYATQKGIPIEDTILEDKSV 245
Query: 102 NTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRIN 142
NT N + + N H + VT+++H+ R + ++
Sbjct: 246 NTLQNMIFSKKIMDNLIPNTHASIFVTNNFHLFRAGIFARKAG 288
>gi|145223836|ref|YP_001134514.1| hypothetical protein Mflv_3249 [Mycobacterium gilvum PYR-GCK]
gi|145216322|gb|ABP45726.1| protein of unknown function DUF218 [Mycobacterium gilvum PYR-GCK]
Length = 202
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV------SKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ + + I ++G + +L+ ++ I + +A +
Sbjct: 74 RVLAGLAVAQMFPQAPIIVTGGNPRNGNTEAEQMGKMLRLYGTPRE----RIILEERANS 129
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T NA + AE+ +++VT H R
Sbjct: 130 TVQNAAFSVPLAEQAGASGIILVTSSSHQDRA 161
>gi|291302129|ref|YP_003513407.1| hypothetical protein Snas_4671 [Stackebrandtia nassauensis DSM
44728]
gi|290571349|gb|ADD44314.1| protein of unknown function DUF218 [Stackebrandtia nassauensis DSM
44728]
Length = 225
Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 9/127 (7%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A L E E + +SG + + + +++ I + + + Y +T +
Sbjct: 74 RLELARRLYEAGKAEVVLVSGDNGQEEYNEVDPMREWLIERGVPGERVVGDYAGFDTYDS 133
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + +VT +H+ R ++ + + +K+
Sbjct: 134 CVRARE---VFGVEALTVVTQGFHVERAVTLCRQAG----IEANGVGDDSVRRYPRPWKV 186
Query: 167 KILRVLL 173
+R
Sbjct: 187 GTVREWA 193
>gi|317491318|ref|ZP_07949754.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920865|gb|EFV42188.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 248
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 24/156 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIP-------DHPSVSAIVVL-------TG-- 45
R YG+ I + I R++ P D P VVL TG
Sbjct: 3 RRLIYGILTVAILLAVTAIGLDRWISWKTAPYIYEEVQDLPHRQVGVVLGTAKYVSTGTI 62
Query: 46 ---EPIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKA 100
RI+ A + + +SG + S + +++ I + I + Y
Sbjct: 63 NQYYRYRIQGALNAYNSNKVNYLLLSGDNALESYNEPVTMRRDLITAGVPSGDIVLDYAG 122
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T + + N+F I+T +H R
Sbjct: 123 FRTLDSIVRTRKVFDTNDFT---IITQRFHCERALF 155
>gi|239630407|ref|ZP_04673438.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301067561|ref|YP_003789584.1| hypothetical protein LCAZH_2543 [Lactobacillus casei str. Zhang]
gi|239526690|gb|EEQ65691.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439968|gb|ADK19734.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 352
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 29/156 (18%)
Query: 8 LFVCLIFFIMGF--------ISFIRYVKQMHIPDHPSVSAIVV----LTGE------PIR 49
+ + F + GF + + H IV+ L G+ R
Sbjct: 133 FSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPHNRTFLIVLGAGLLNGDQVSPLLASR 192
Query: 50 IERAFELLENQI-----GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
I+ A + QI +I SG ++S+ + +Q+ + + + E + ++
Sbjct: 193 IDAAIKFYRKQIKKGRPAPRIIFSGGKGSDEAISEAMAMQRYALGKGIPEGDTLLEDQST 252
Query: 102 NTEGNAQEASAWAEKNNFHHVL---IVTHDYHMPRT 134
T N Q + + T++YH+ R
Sbjct: 253 TTLENMQFSKRLITQEIGESPYKASFFTNNYHLFRA 288
>gi|89072860|ref|ZP_01159417.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
gi|89051382|gb|EAR56837.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
Length = 365
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 24/154 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGG---VPM------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQR 140
I + + + I A +T NA +S +++ H I++ H+ R T E+
Sbjct: 251 WLIEKGINKNRIIEENYATSTVDNALFSSYALARHHIKHATIISSASHVRRGQTLFEIAS 310
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+ Q I + +S+ + + +L I
Sbjct: 311 WQTGPQNITFDTVSYPDKPLKELTTPNDDELLGI 344
>gi|331674630|ref|ZP_08375389.1| conserved hypothetical protein [Escherichia coli TA280]
gi|331068069|gb|EGI39465.1| conserved hypothetical protein [Escherichia coli TA280]
Length = 230
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N I++ ++H R
Sbjct: 136 VVRAKKVFGENYIT---IISQEFHNQRAI 161
>gi|260777035|ref|ZP_05885929.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606701|gb|EEX32975.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 365
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 22/111 (19%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I+ ++ + A++VLTG + +H + L+
Sbjct: 213 IQRLETTLAMAKANPDALIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
I + +++ I A +T GNA +S ++ H I++ H+ R
Sbjct: 251 WLISKGVSKDRIIEENYATSTVGNALFSSYALARHGIKHATIISSASHVRR 301
>gi|309802755|ref|ZP_07696859.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
gi|308220819|gb|EFO77127.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
Length = 346
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRIERA 53
+ + V I + + F + P I+VL G R++ A
Sbjct: 135 FVSMMVNYIPIALFGVWFSNDIC-YKSGKTPETEYIIVLGCSILDDGTVTPLLRGRLDAA 193
Query: 54 FELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E I+ G +S+ + + Q + E I + K+ TE N +
Sbjct: 194 IAAWEQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKF 253
Query: 110 ASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRIN 142
+ A + H I T YH R + +R+
Sbjct: 254 SHAIMDARGGAAHCTIATSSYHCLRAAMFARRLG 287
>gi|306823505|ref|ZP_07456880.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304553212|gb|EFM41124.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 348
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRIERA 53
+ + V I + + F + P I+VL G R++ A
Sbjct: 137 FVSMMVNYIPIALFGVWFSNDIC-YKSGKTPETEYIIVLGCSILDDGTVTPLLRGRLDAA 195
Query: 54 FELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E I+ G +S+ + + Q + E I + K+ TE N +
Sbjct: 196 IAAWEQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKF 255
Query: 110 ASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRIN 142
+ A + H I T YH R + +R+
Sbjct: 256 SHAIMDARGGAAHCTIATSSYHCLRAAMFARRLG 289
>gi|255009581|ref|ZP_05281707.1| putative transport-related membrane protein [Bacteroides fragilis
3_1_12]
gi|313147358|ref|ZP_07809551.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136125|gb|EFR53485.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 212
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 11/93 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + I +SG + ++ +++ I + E I + Y L T +
Sbjct: 69 RIKAATELYNAGKIKYILVSGDNRRNDYNEPEEMKQALIATGIPEQQIILDYAGLRTLDS 128
Query: 107 AQEASAWAEKN---NFHHVLIVTHDYHMPRTFL 136
+ +++ ++H R
Sbjct: 129 V------IRAHLIFGLERFTLISQEFHNERAIF 155
>gi|27468856|ref|NP_765493.1| membrane protein [Staphylococcus epidermidis ATCC 12228]
gi|27316404|gb|AAO05579.1|AE016750_184 membrane protein [Staphylococcus epidermidis ATCC 12228]
Length = 318
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPTSNHMLCVTSQFHVLRALKFAKKAH 268
>gi|261367379|ref|ZP_05980262.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282570140|gb|EFB75675.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 272
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 2 RYFWYGLFV--CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIR 49
R W+GL V L ++GF++ Y P ++VL R
Sbjct: 61 RVVWWGLVVGGILYALLIGFVAVSGYTN----PPTGQEKVVIVLGAGLRRDKPSTLLRYR 116
Query: 50 IERAFELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+++A+ + + I+ G + + +++ I + L I + +TE
Sbjct: 117 LDKAYA-YAAAHPDVLVITSGGQGRDEWIPEGQAMREYLIAKGLDPEQIVAENASTSTEE 175
Query: 106 NAQEASAWAEKNNFHH---VLIVTHDYHMPRT 134
N + + + ++ V++ +H R
Sbjct: 176 NFAFSLEILRQRGYDESTPIVYVSNAFHCYRA 207
>gi|329726589|gb|EGG63052.1| hypothetical protein SEVCU144_2221 [Staphylococcus epidermidis
VCU144]
Length = 318
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSHMLCVTSQFHVLRALKFAKKAH 268
>gi|254975478|ref|ZP_05271950.1| hypothetical protein CdifQC_09212 [Clostridium difficile QCD-66c26]
gi|255092865|ref|ZP_05322343.1| hypothetical protein CdifC_09464 [Clostridium difficile CIP 107932]
gi|255314608|ref|ZP_05356191.1| hypothetical protein CdifQCD-7_09675 [Clostridium difficile
QCD-76w55]
gi|255517281|ref|ZP_05384957.1| hypothetical protein CdifQCD-_09254 [Clostridium difficile
QCD-97b34]
gi|255650388|ref|ZP_05397290.1| hypothetical protein CdifQCD_09414 [Clostridium difficile
QCD-37x79]
gi|260683502|ref|YP_003214787.1| hypothetical protein CD196_1762 [Clostridium difficile CD196]
gi|260687098|ref|YP_003218231.1| hypothetical protein CDR20291_1737 [Clostridium difficile R20291]
gi|306520344|ref|ZP_07406691.1| hypothetical protein CdifQ_10684 [Clostridium difficile QCD-32g58]
gi|260209665|emb|CBA63373.1| putative membrane protein [Clostridium difficile CD196]
gi|260213114|emb|CBE04521.1| putative membrane protein [Clostridium difficile R20291]
Length = 248
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + L+ + +SG +++ ++ I+ + + I K+ NT
Sbjct: 110 KGRLDTALKYLKINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNSIDKNRIIEEDKSTNT 169
Query: 104 EGNAQEASAWAEKNNFHHV-----LIVTHDYHMPRT-FLELQRINSTVQFIP 149
N + + E+++ + IVT D+H+ R+ L + F
Sbjct: 170 YENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYA 221
>gi|57865386|ref|YP_189508.1| hypothetical protein SERP1950 [Staphylococcus epidermidis RP62A]
gi|251811935|ref|ZP_04826408.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875226|ref|ZP_06284099.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|57636044|gb|AAW52832.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
gi|251804534|gb|EES57191.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295991|gb|EFA88512.1| putative membrane protein [Staphylococcus epidermidis SK135]
Length = 318
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAH 268
>gi|331648889|ref|ZP_08349977.1| conserved hypothetical protein [Escherichia coli M605]
gi|330909152|gb|EGH37666.1| SanA protein [Escherichia coli AA86]
gi|331042636|gb|EGI14778.1| conserved hypothetical protein [Escherichia coli M605]
Length = 230
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDSAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|293376843|ref|ZP_06623062.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325837249|ref|ZP_08166327.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
gi|292644537|gb|EFF62628.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325491023|gb|EGC93318.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
Length = 184
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQ-DLAECCIDIGYKALN 102
R+E+ LL ++ ++G + + + + +++ + I + ++E I + A N
Sbjct: 51 RSRLEKGALLLHENPQLRVIVTGGNGTDLKLPEAHIMKNVLIEEFGISEDRIIVEDLARN 110
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
T N ++ V IVT ++H RT L R++ Q I
Sbjct: 111 TFENLLFCKPLIKEE---RVAIVTSEFHSIRTRLLAHRLHLNCQLI 153
>gi|171741210|ref|ZP_02917017.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
gi|171276824|gb|EDT44485.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
Length = 348
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRIERA 53
+ + V I + + F + P I+VL G R++ A
Sbjct: 137 FVSMMVNYIPIALFGVWFSNDIC-YKSGKAPETEYIIVLGCSILDDGTVTPLLRGRLDAA 195
Query: 54 FELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E I+ G +S+ + + Q + E I + K+ TE N +
Sbjct: 196 IAAWEQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKF 255
Query: 110 ASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRIN 142
+ A + H I T YH R + +R+
Sbjct: 256 SHAIMDARGGAAHCTIATSSYHCLRAAMFARRLG 289
>gi|283455426|ref|YP_003359990.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
gi|283102060|gb|ADB09166.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
Length = 346
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIRIERA 53
+ + V I + + F + P I+VL G R++ A
Sbjct: 135 FVSMMVNYIPIALFGVWFSNDIC-YKSGKAPETEYIIVLGCSILDDGTVTPLLRGRLDAA 193
Query: 54 FELLENQIGEKIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
E I+ G +S+ + + Q + E I + K+ TE N +
Sbjct: 194 IAAWEQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKF 253
Query: 110 ASAWAEKNN-FHHVLIVTHDYHMPRTFLELQRIN 142
+ A + H I T YH R + +R+
Sbjct: 254 SHAIMDARGGAAHCTIATSSYHCLRAAMFARRLG 287
>gi|303249806|ref|ZP_07336010.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251995|ref|ZP_07533896.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651373|gb|EFL81525.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860687|gb|EFM92699.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 229
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ + + +SG + V + L + I +++ E GY+ L
Sbjct: 90 RLEAAVQLINKGKAKTLLVSGDNKTPYYNEPKVMLNDLYKM-GIPKNIIEQDF-AGYRTL 147
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 148 DSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|126699451|ref|YP_001088348.1| hypothetical protein CD1842 [Clostridium difficile 630]
gi|255101014|ref|ZP_05329991.1| hypothetical protein CdifQCD-6_09404 [Clostridium difficile
QCD-63q42]
gi|255306869|ref|ZP_05351040.1| hypothetical protein CdifA_09792 [Clostridium difficile ATCC 43255]
gi|115250888|emb|CAJ68713.1| conserved hypothetical protein, DUF218 family [Clostridium
difficile]
Length = 248
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + L+ + +SG +++ ++ I+ + + I K+ NT
Sbjct: 110 KGRLDTALKYLKINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNT 169
Query: 104 EGNAQEASAWAEKNNFHHV-----LIVTHDYHMPRT-FLELQRINSTVQFIP 149
N + + E+++ + IVT D+H+ R+ L + F
Sbjct: 170 YENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYA 221
>gi|229102877|ref|ZP_04233571.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
gi|228680550|gb|EEL34733.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
Length = 166
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I + ++ NT
Sbjct: 37 QNRLDVALEYLFSHPEAKVIVSGGQGEDEDIPEAHSMRIYLMVHGIDESRILMEDRSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + + + H ++V++ YH+ RT + +R+
Sbjct: 97 YENLKFSMDLF---DVKHAVVVSNTYHLYRTKIIARRLG 132
>gi|167628013|ref|YP_001678513.1| hypothetical protein Fphi_1785 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598014|gb|ABZ88012.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 231
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 31/205 (15%)
Query: 1 MRYFWYGLFVCLIFFIMG------FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAF 54
+RYF + V +I++++G ++ ++ I + AI++L I +AF
Sbjct: 26 LRYF--VIIVTIIYYLVGNGVIGNILAKPIRLESTDIKQCANTKAIILL--GAG-INQAF 80
Query: 55 ELLE----------------NQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCID 95
+ LE NQ + I ISG S +S+ + I + + + I
Sbjct: 81 DKLEPSLSAYDRILKTAEVYNQYPQDIIISGGSPSGYKLSEAEVYADILYKLGIPKSKIR 140
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++ NT NAQ +N + ++T H R L N I ++
Sbjct: 141 LEKQSKNTYENAQFTKNILSDHN-NTYCLITGGIHYQRAKLIFDSFNINTINIASSKLAP 199
Query: 156 DLEENSSIFKIKILRVLLIEYLKIL 180
++ S + I + ++ EYL I+
Sbjct: 200 EISFLPSAYNFYITQAIIHEYLGIV 224
>gi|117618144|ref|YP_857439.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559551|gb|ABK36499.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 320
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+E L + I ++G + L+ +++ + I A +T
Sbjct: 169 GRLETTRALAKANPAALIILTGGVPQNRQTEGKLMADWLVKKGIDRSRIIEENYATSTVE 228
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA + ++ + +V+ H+ R T LE+
Sbjct: 229 NALYSGYALARHQIEYATLVSSASHVRRGQTLLEIA 264
>gi|117921230|ref|YP_870422.1| hypothetical protein Shewana3_2789 [Shewanella sp. ANA-3]
gi|117613562|gb|ABK49016.1| protein of unknown function DUF218 [Shewanella sp. ANA-3]
Length = 244
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 7/143 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ L+ + +SG ++ ++ K + + I +T
Sbjct: 105 RLTEGLRQLKLGQDCTLVVSGWEGELTQHPHAEVMAKAAVELGVDATRIVQLPLPRDTIE 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD-LEENSSIF 164
A + E V +VT HMPR+ T P + D +
Sbjct: 165 EAHY---FKEHFGDQAVRLVTSASHMPRSMAIFSGQGLTASAAPTDFRARDGFYWRLTAD 221
Query: 165 KIKILRVLLIEYLKILLLSIQLS 187
+ + + EY+ L L I+
Sbjct: 222 NLLASQRAIHEYIGRLWLWIKQG 244
>gi|309799013|ref|ZP_07693269.1| integral membrane protein [Streptococcus infantis SK1302]
gi|308117363|gb|EFO54783.1| integral membrane protein [Streptococcus infantis SK1302]
Length = 313
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 18/122 (14%)
Query: 31 IPDHPSVSAIVV----LTGEPI-------RIERAFELLENQIGEKIFIS-----GVHHSV 74
IP I++ L G RI++A E I I G +
Sbjct: 130 IPKKKPYDFIIIHGAGLLGGEKVTPLLKRRIDKAVEAYHQSKNPHIKIIASGGQGTDEKI 189
Query: 75 SKDILLQKIPIRQ-DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMP 132
S+ + + + D+ + I + Y++ T N + EK L VT+DYH+
Sbjct: 190 SEAQAIANYLVTETDVPQDVIILEYQSRTTYENLLYSKEIGEKMVADPQFLFVTNDYHVF 249
Query: 133 RT 134
RT
Sbjct: 250 RT 251
>gi|315444167|ref|YP_004077046.1| hypothetical protein Mspyr1_25770 [Mycobacterium sp. Spyr1]
gi|315262470|gb|ADT99211.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 185
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV------SKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ + + I ++G + +L+ ++ I + +A +
Sbjct: 57 RVLAGLAVAQMFPQAPIIVTGGNPRNGNTEAEQMGKMLRLYGTPRE----RIILEERANS 112
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T NA + AE+ +++VT H R
Sbjct: 113 TVQNAAFSVPLAEQAGASGIILVTSSSHQDRA 144
>gi|281180139|dbj|BAI56469.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 230
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDSAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+ +N+ I++ ++H R
Sbjct: 136 VVRANKVFSENHIT---IISQEFHNQRAI 161
>gi|145346673|ref|XP_001417809.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578037|gb|ABO96102.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 228
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 44/150 (29%)
Query: 38 SAIVVLTGEPIRIERAFELLE-----------------NQIGEKIFISG----------- 69
AIVV+ G IE L +I +SG
Sbjct: 12 DAIVVVAGG---IEDDGTLPAWVTPRLDYAATAYANATADAKPRILLSGSMTPHKPPPMA 68
Query: 70 -----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW-AEKNNFHHVL 123
+H S S + + + + + +++T GNA + A + V
Sbjct: 69 KGGFNLHESTS----MASYLMDKGVPADSMLKDTASMDTIGNAYYSLCLHAIPRAWTRVE 124
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+VT +HM RT + + P+ ++
Sbjct: 125 VVTSAFHMERTRAAFEWVW---GLAPHGVV 151
>gi|295093712|emb|CBK82803.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
Length = 282
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 15/115 (13%)
Query: 35 PSVSA-IVVLT-----GEPI-----RIERAFELLENQIGEKIFISG---VHHSVSKDILL 80
P A +VVL G P R+ A + L+ +SG S+S+ +
Sbjct: 127 PKQDATVVVLGCAVRGGGPSLMLRERLIAAQDYLDETPEAVCVVSGGQGADESMSEAQCM 186
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRT 134
+ +A I + K+ +T N + ++ +N + IVT+++H R
Sbjct: 187 YEYLTEHGIAPERIYMEDKSTSTRENIKFSAEIIRQNGLPDKMNIVTNEFHEYRA 241
>gi|229160681|ref|ZP_04288673.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
gi|228622696|gb|EEK79530.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
Length = 159
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL RI++A E L+ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRIDKAAEYLKLHEKTIAIVSGGQGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ +AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|303270951|ref|XP_003054837.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462811|gb|EEH60089.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 366
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 47/182 (25%), Gaps = 63/182 (34%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDI------------------------- 78
R++ +L + + SG + +
Sbjct: 144 AARVDAGVKLFCEGTAKNLLFSGASGGDPAATISEANAMMNHALRRAKALKCERPTTPAF 203
Query: 79 ------------LLQKIPIR-------------QDLAECCI----DIGYKALNTEGNAQE 109
LL+ QDL C + + +T NA
Sbjct: 204 KVDTRLYTRGSFLLRDSKGNELRMSERHGGCEGQDLDSGCAPFRWVMEESSTSTRENAIY 263
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
A K N+ V +VT+ +H R + + I +E + I + +
Sbjct: 264 ALTECGKRNWTKVAVVTNRFHQWRADGAFHVVRVEISPIA-----SGMENDPWIRT-RTI 317
Query: 170 RV 171
R+
Sbjct: 318 RI 319
>gi|255036407|ref|YP_003087028.1| hypothetical protein Dfer_2646 [Dyadobacter fermentans DSM 18053]
gi|254949163|gb|ACT93863.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 201
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 60/186 (32%), Gaps = 31/186 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ +C + + + + + P+ A+V+ T + R+E
Sbjct: 2 VFILLCNFWVVYCTRQYSYFSIESLPPNDV---ALVLGTSKKSEKGTENLFFKYRMEATA 58
Query: 55 ELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L + + I +SG + S + + + + + E + + Y T +
Sbjct: 59 RLFKEGKIKYIILSGNNDSQYYNEPLDMQRAL-LNLGIPENVMTLDYAGFRTFDSIVRCK 117
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
++NF +++ ++H R I + D+ R
Sbjct: 118 QVFNQDNFT---VISQNFHNARAL----YIAHNEGINAISFAAQDVP------DGYSFRT 164
Query: 172 LLIEYL 177
L+ EYL
Sbjct: 165 LVREYL 170
>gi|197286351|ref|YP_002152223.1| hypothetical protein PMI2504 [Proteus mirabilis HI4320]
gi|227357403|ref|ZP_03841758.1| transporter [Proteus mirabilis ATCC 29906]
gi|194683838|emb|CAR44949.1| putative exported protein [Proteus mirabilis HI4320]
gi|227162408|gb|EEI47405.1| transporter [Proteus mirabilis ATCC 29906]
Length = 379
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 22/98 (22%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
A++V+TG + +A + ++ L+ +++ + I
Sbjct: 241 PDAMIVVTGG---VPKAHQ-------------------TEGKLMADWLVKKGIPAERIFQ 278
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A +T NA + K+ +I++ H+ R
Sbjct: 279 DNYARSTVENALFSRYALTKHRIKTAVIISSGSHVRRA 316
>gi|251779225|ref|ZP_04822145.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083540|gb|EES49430.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 348
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 65/164 (39%), Gaps = 24/164 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PI 48
++ G+ L++++ +F I ++ Q + P I+VL
Sbjct: 127 VKVLLGGINFILLYYLFDVFNFLMISFLYQFNKPKLCQ-DFIIVLGSGLIGERVPPLLAS 185
Query: 49 RIERAFELL-ENQIG---EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI++A E + KI SG +S+ + +Q+ ++ + + K++
Sbjct: 186 RIDKAIEFYNKQGTVTNPPKIIFSGGQGSDEKISEALAMQRYATQKGIPIEDTILEDKSV 245
Query: 102 NTEGNAQEASAWAE---KNNFHHVLIVTHDYHMPRTFLELQRIN 142
NT N + + N + + VT+++H+ R + ++
Sbjct: 246 NTLQNMIFSKKIMDNSTPNTYASIF-VTNNFHLFRAGIFARKAG 288
>gi|62181739|ref|YP_218156.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129372|gb|AAX67075.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716225|gb|EFZ07796.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 230
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAIQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N I++ +H R
Sbjct: 136 VVRARKVFGENRIT---IISQAFHNQRAI 161
>gi|325676983|ref|ZP_08156654.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
gi|325552145|gb|EGD21836.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
Length = 231
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 17/143 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
G + + + G + V ++ D AIVVL G R+++A
Sbjct: 35 LGALLIGVVLVGGTALRVWQVARVT--DTTPADAIVVL-GAAQYDGTPSSVFEARLDQAH 91
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+L E + I G ++ + + Q + I + +T + + S
Sbjct: 92 KLYEQGVAATIVTVGGKQEGDEYTEAASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVS 151
Query: 112 AWAEKNNFHHVLIVTHDYHMPRT 134
H ++V+ +H RT
Sbjct: 152 REMGARGLHSAVLVSDPWHSLRT 174
>gi|293367067|ref|ZP_06613739.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318797|gb|EFE59171.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733884|gb|EGG70208.1| putative membrane protein [Staphylococcus epidermidis VCU028]
gi|329735064|gb|EGG71360.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 318
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAH 268
>gi|195873578|ref|ZP_02697480.2| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|200387035|ref|ZP_03213647.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928020|ref|ZP_03219220.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205358504|ref|ZP_03224049.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205359734|ref|ZP_02831710.2| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360583|ref|ZP_02684746.2| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|195633348|gb|EDX51762.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|199604133|gb|EDZ02678.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322342|gb|EDZ07539.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205333860|gb|EDZ20624.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205343456|gb|EDZ30220.1| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205348359|gb|EDZ34990.1| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 210
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 56 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 115
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 116 VVRAR---KVFGESRITIISQAFHNQRAI 141
>gi|49186304|ref|YP_029556.1| hypothetical protein BAS3299 [Bacillus anthracis str. Sterne]
gi|49180231|gb|AAT55607.1| conserved domain protein [Bacillus anthracis str. Sterne]
Length = 251
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
I V G P + E +G +I ++G H S + L + I
Sbjct: 57 PQKCDVIFVFGGSHPGNWQAPLETYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 116
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V + R + L++
Sbjct: 117 VNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKINRLLFVCKNLGAGRQYRVLKK 176
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 177 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 233
>gi|30263455|ref|NP_845832.1| hypothetical protein BA_3559 [Bacillus anthracis str. Ames]
gi|47528843|ref|YP_020192.1| hypothetical protein GBAA_3559 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65320783|ref|ZP_00393742.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|165872367|ref|ZP_02217003.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167637273|ref|ZP_02395553.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170708528|ref|ZP_02898969.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177654643|ref|ZP_02936467.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190565091|ref|ZP_03018012.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227813668|ref|YP_002813677.1| hypothetical protein BAMEG_1072 [Bacillus anthracis str. CDC 684]
gi|229600735|ref|YP_002867703.1| hypothetical protein BAA_3589 [Bacillus anthracis str. A0248]
gi|254738542|ref|ZP_05196245.1| hypothetical protein BantWNA_25554 [Bacillus anthracis str. Western
North America USA6153]
gi|254752860|ref|ZP_05204896.1| hypothetical protein BantV_10331 [Bacillus anthracis str. Vollum]
gi|254759132|ref|ZP_05211158.1| hypothetical protein BantA9_12571 [Bacillus anthracis str.
Australia 94]
gi|30258090|gb|AAP27318.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47503991|gb|AAT32667.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|164711920|gb|EDR17461.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167514780|gb|EDR90146.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170126530|gb|EDS95416.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|172080608|gb|EDT65692.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190564408|gb|EDV18372.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227007595|gb|ACP17338.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229265143|gb|ACQ46780.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 225
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
I V G P + E +G +I ++G H S + L + I
Sbjct: 31 PQKCDVIFVFGGSHPGNWQAPLETYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 90
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V + R + L++
Sbjct: 91 VNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKINRLLFVCKNLGAGRQYRVLKK 150
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 151 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 207
>gi|229074933|ref|ZP_04207940.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
gi|228708161|gb|EEL60327.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
Length = 166
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I + ++ NT
Sbjct: 37 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + + + H ++V++ YH+ RT + +R+
Sbjct: 97 YENLKFSMDLF---DVKHAVVVSNTYHLYRTKIIARRLG 132
>gi|229096776|ref|ZP_04227746.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
gi|229115758|ref|ZP_04245160.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228667641|gb|EEL23081.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228686618|gb|EEL40526.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
Length = 166
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I + ++ NT
Sbjct: 37 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + + + H ++V++ YH+ RT + +R+
Sbjct: 97 YENLKFSMDLF---DVKHAVVVSNTYHLYRTKIIARRLG 132
>gi|229017592|ref|ZP_04174486.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
gi|229023809|ref|ZP_04180294.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228737494|gb|EEL88004.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228743661|gb|EEL93767.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
Length = 166
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A E L + K+ +SG + + ++ + + E I + ++ NT
Sbjct: 37 QNRLDVALEYLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNT 96
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + + + H ++V++ YH+ RT + +R+
Sbjct: 97 YENLKFSMDLF---DVKHAVVVSNTYHLYRTKIIARRLG 132
>gi|218670399|ref|ZP_03520070.1| hypothetical protein RetlG_01442 [Rhizobium etli GR56]
Length = 90
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ H L++T +HMPR+ +++ + +P+P
Sbjct: 1 TKEFLAGQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 40
>gi|204927133|ref|ZP_03218335.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204323798|gb|EDZ08993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 134
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 43 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ + I I ++ T N + A + +
Sbjct: 103 KGIPAKAIFIEERSTVTRENIRYAKQILRQQH 134
>gi|183602024|ref|ZP_02963393.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219682933|ref|YP_002469316.1| hypothetical protein BLA_0439 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190510|ref|YP_002967904.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195916|ref|YP_002969471.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218909|gb|EDT89551.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620583|gb|ACL28740.1| putative membrane protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248902|gb|ACS45842.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250470|gb|ACS47409.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178239|gb|ADC85485.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793497|gb|ADG33032.1| hypothetical protein BalV_0444 [Bifidobacterium animalis subsp.
lactis V9]
Length = 355
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 63/193 (32%), Gaps = 27/193 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
+ + L C +F + + +H +++ I+VL RI
Sbjct: 141 WVFGVLSACTFYFSAQLAIYCLSSALNLIHFGKARNIAQILVLGSGLFGETVPPLLQKRI 200
Query: 51 ERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ E+ ++ +SG V + + ++ + ++ NT N
Sbjct: 201 AKGIEIQRQDPHARLILSGGQGAGEDVPEGVAMKAWALAHGADPANTVCEERSRNTRENL 260
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ N + V+ YH+ R L ++++ + Y + F +
Sbjct: 261 LFSRNLFADPNGKTAI-VSTGYHVFRALLLSKQLHMNA--VGYGSKTP------WYFSLN 311
Query: 168 ILRVLLIEYLKIL 180
LL E++ +
Sbjct: 312 A---LLREFIAYV 321
>gi|328883409|emb|CCA56648.1| hypothetical protein SVEN_3362 [Streptomyces venezuelae ATCC 10712]
Length = 340
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 29/175 (16%)
Query: 6 YGLFVCLIFFIMG-----FISFIRYVKQMHIPDHPSVSAIVV-----LTGE-------PI 48
G V ++G F+ F+ Y +A VV L G
Sbjct: 123 LGTIVGTTLLVLGYVSFLFLCFVGYAFLYGRLRLRRDAAYVVVLGSGLIGGRRVSPLLAS 182
Query: 49 RIERAFELLENQIGEK-------IFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIG 97
R++R E+ E K + I+ G ++ + + + + +
Sbjct: 183 RLDRGREVYEKLAARKRRDGTAPLLITSGGQGPDETLPESHAMADYLVARGFPPDALVRE 242
Query: 98 YKALNTEGNAQEASAWAEKNNFHHV-LIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ TE N + E++ +IVT+++H R + +R Q + P
Sbjct: 243 DRSRTTEENLLFSKELMERDRPGSACVIVTNNFHAFRAAILARRAGVDGQVVGSP 297
>gi|312140270|ref|YP_004007606.1| membrane protein [Rhodococcus equi 103S]
gi|311889609|emb|CBH48926.1| putative membrane protein [Rhodococcus equi 103S]
Length = 231
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 17/143 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
G + + + G + V ++ D AIVVL G R+++A
Sbjct: 35 LGALLIGVVLVGGTALRVWQVARVT--DTTPADAIVVL-GAAQYDGTPSSVFEARLDQAH 91
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+L E + I G ++ + + Q + I + +T + + S
Sbjct: 92 KLYEQGVAATIVTVGGKQEGDEYTEAASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVS 151
Query: 112 AWAEKNNFHHVLIVTHDYHMPRT 134
++V+ +H RT
Sbjct: 152 REMGARGLRSAVLVSDPWHSLRT 174
>gi|299538217|ref|ZP_07051502.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
gi|298726419|gb|EFI67009.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
Length = 186
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 19/143 (13%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA-----IV----VLTGE------PIRIERAF 54
V +I G + + K++ P I+ V G R+E A
Sbjct: 3 VGVILIGSGIVLYTWLGKEIDQGMEPKADGSADYMIILGAKVRPGGVPSLSLKSRLEVAV 62
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L K+ +SG ++ ++Q + + I I ++ +T N +
Sbjct: 63 PYLTKYPHVKVIVSGGQGPDEDRTEASVMQDYLEQYGIDATRIIIEDQSTSTYENLVFSK 122
Query: 112 AWAEKNNFHHVLIVTHDYHMPRT 134
+ IV++D+H+ R
Sbjct: 123 DLL-PKETKKITIVSNDFHLKRA 144
>gi|295838336|ref|ZP_06825269.1| SanA protein [Streptomyces sp. SPB74]
gi|197695869|gb|EDY42802.1| SanA protein [Streptomyces sp. SPB74]
Length = 229
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 48/173 (27%), Gaps = 20/173 (11%)
Query: 4 FWYGLFVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
W + +C++ + +I D VV R++
Sbjct: 23 LWAVMALCVLALLPSAWIRVASGGAVRDEADVDPAPVAVVFGAGLRDGRPSPYLAHRLDV 82
Query: 53 AFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
A L + ++G H D ++ R + + + +T + A
Sbjct: 83 AARLYAAGRVSAVLVTGDHGRAGYDEPTAMRDYLARAGVPGRQVVWDHAGFDTWDSCVRA 142
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
++V+ +H+ R + Q + + D + +
Sbjct: 143 R---RVFGVDRAVLVSQGFHIRRAVALCRAAGVEAQ----GVAARDPRDVTWY 188
>gi|317489297|ref|ZP_07947813.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325832335|ref|ZP_08165334.1| putative membrane protein [Eggerthella sp. HGA1]
gi|316911603|gb|EFV33196.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486171|gb|EGC88625.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 333
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Query: 29 MHIPDHPSVSAIVV----LTGE------PIRIERAFELLENQIGEKIFIS----GVHHSV 74
+P IVV L+G R+++A EL E + I+ G +V
Sbjct: 150 RRLPKRRDYDYIVVHGAGLSGTKPTPLLAARLDKAVELWEADHRRAVIIASGGQGADEAV 209
Query: 75 SKDILLQKIPIRQDLAECCIDIGY-KALNTEGNAQEASAWAEKN---NFHHVLIVTHDYH 130
S+ ++ + + I ++ T N + + A + + +VT DYH
Sbjct: 210 SEAEAMRTYLVEERGVPADAVIEEDRSTTTMENLRNSKAIMDARSGAGAYRAAVVTSDYH 269
Query: 131 MPRT 134
+ RT
Sbjct: 270 VFRT 273
>gi|261339254|ref|ZP_05967112.1| hypothetical protein ENTCAN_05490 [Enterobacter cancerogenus ATCC
35316]
gi|288319111|gb|EFC58049.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316]
Length = 259
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 29/139 (20%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G K+ +G + + +
Sbjct: 82 IVVLGGGYTWDPDWAPSSNLINNSLPRLNEGIRLWLANPGAKLIFTGAAAKTNPVSTAEA 141
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ I + +TE EA+A + L+VT H+PR +
Sbjct: 142 GARVAESLGVPRSSIITLDSP-KDTEE---EAAAVKKAIGDVPFLLVTSASHLPRAMIFF 197
Query: 139 QRINSTVQFIPYPIISHDL 157
+ P P ++ L
Sbjct: 198 ESQG----LHPLPAPANQL 212
>gi|229824294|ref|ZP_04450363.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
gi|229786267|gb|EEP22381.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
Length = 229
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYK 99
VL G R+ A L + + + +SG H + + + ++ ++ +A I + +
Sbjct: 69 VLAG---RLNSALTLAQTFPNKALIMSGDHTNQYYNEVAVMKDYLVQHGVASERIYLDHA 125
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+T + +N V+IVT YH+ R +
Sbjct: 126 GYSTYDSLYRLKHVLGQN---RVIIVTQGYHLSRALM 159
>gi|319945126|ref|ZP_08019388.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
gi|319741696|gb|EFV94121.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
Length = 335
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 17/127 (13%)
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN-----FHHVLIVT 126
S ++++ I + I + T + A+ + V++VT
Sbjct: 210 PEYSLAADMRRLAIGLGVPPEAIRTVRSSWTTFQDISGAARLIREEGGQDDSRQAVILVT 269
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISH--DLEENSSIFK------IKILRVLLIEYLK 178
HM R+ + P P+ S L + R +L E +
Sbjct: 270 SALHMQRSL----AVAHQAGLDPIPVRSDYRQLASPTWAAWFPNNGAPWNARAMLHELIG 325
Query: 179 ILLLSIQ 185
+ ++
Sbjct: 326 VWYYRLR 332
>gi|228947123|ref|ZP_04109417.1| hypothetical protein bthur0007_32530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123023|ref|ZP_04252230.1| hypothetical protein bcere0016_33140 [Bacillus cereus 95/8201]
gi|228660317|gb|EEL15950.1| hypothetical protein bcere0016_33140 [Bacillus cereus 95/8201]
gi|228812370|gb|EEM58697.1| hypothetical protein bthur0007_32530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 225
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
I V G P + E +G +I ++G H S + L + I
Sbjct: 31 PQKCDVIFVFGGSHPGNWQAPLEAYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 90
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V + R + L++
Sbjct: 91 VNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKINRLLFVCKNLGAGRQYRVLKK 150
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 151 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 207
>gi|167632450|ref|ZP_02390777.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170689062|ref|ZP_02880261.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|254686070|ref|ZP_05149929.1| hypothetical protein BantC_19740 [Bacillus anthracis str.
CNEVA-9066]
gi|254723471|ref|ZP_05185259.1| hypothetical protein BantA1_13469 [Bacillus anthracis str. A1055]
gi|254740707|ref|ZP_05198398.1| hypothetical protein BantKB_06757 [Bacillus anthracis str. Kruger
B]
gi|167532748|gb|EDR95384.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170666929|gb|EDT17693.1| conserved domain protein [Bacillus anthracis str. A0465]
Length = 225
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
I V G P + E +G +I ++G H S + L + I
Sbjct: 31 PQKCDVIFVFGGSHPGNWQAPLEAYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 90
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V + R + L++
Sbjct: 91 VNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKINRLLFVCKNLGAGRQYRVLKK 150
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 151 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 207
>gi|90577511|ref|ZP_01233322.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
gi|90440597|gb|EAS65777.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
Length = 365
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 24/154 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGG---VPM------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQR 140
I + +++ I A +T NA +S +++ H I++ H+ R T E+
Sbjct: 251 WLIEKGISKDRIIEENYATSTVDNALFSSYALARHHIKHATIISSASHVRRGQTLFEIAS 310
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+ Q I + +S+ + + +L I
Sbjct: 311 WQTGPQSITFDTVSYPDKPLKELATPNDGELLGI 344
>gi|295106342|emb|CBL03885.1| Uncharacterized conserved protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 333
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
Query: 29 MHIPDHPSVSAIVV----LTGE------PIRIERAFELLENQIGEKIFIS----GVHHSV 74
+P IVV L+G R+++ EL E I I+ G V
Sbjct: 150 RRLPKRRDYDYIVVHGAGLSGTKPTPLLAARLDKGVELWEAGARRAIIIASGGQGADEEV 209
Query: 75 SKDILLQKIPIRQDLAECCIDIGY-KALNTEGNAQEASAWAEKN---NFHHVLIVTHDYH 130
+ ++ + + I ++ T N + + A + + +VT DYH
Sbjct: 210 PEAQAMRAYLMEERGVPVDAIIEEDRSTTTMENLRNSKAIMDARSGAGQYRAAVVTSDYH 269
Query: 131 MPRT 134
+ RT
Sbjct: 270 VFRT 273
>gi|242243837|ref|ZP_04798281.1| membrane protein [Staphylococcus epidermidis W23144]
gi|242232681|gb|EES34993.1| membrane protein [Staphylococcus epidermidis W23144]
Length = 318
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENYIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAH 268
>gi|116496009|ref|YP_807743.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|191639488|ref|YP_001988654.1| hypothetical protein LCABL_27450 [Lactobacillus casei BL23]
gi|116106159|gb|ABJ71301.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|190713790|emb|CAQ67796.1| Putative uncharacterized protein precursor [Lactobacillus casei
BL23]
gi|327383585|gb|AEA55061.1| Conserved domain protein [Lactobacillus casei LC2W]
gi|327386777|gb|AEA58251.1| Conserved domain protein [Lactobacillus casei BD-II]
Length = 352
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 29/156 (18%)
Query: 8 LFVCLIFFIMGF--------ISFIRYVKQMHIPDHPSVSAIVVLTG---E-------PIR 49
+ + F + GF + + H IV+ G R
Sbjct: 133 FSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPHNRTFLIVLGAGLLHGDQVSPLLASR 192
Query: 50 IERAFELLENQI-----GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
I+ A + QI +I SG ++S+ + +Q+ + + + E + ++
Sbjct: 193 IDAAIKFYRKQIKKGRPAPRIIFSGGKGSDEAISEAMAMQRYALGKGIPEGDTLLEDQST 252
Query: 102 NTEGNAQEASAWAEKNNFHHVL---IVTHDYHMPRT 134
T N Q + + T++YH+ R
Sbjct: 253 TTLENMQFSKRLITQEIGESPYKASFFTNNYHLFRA 288
>gi|160946740|ref|ZP_02093943.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
gi|158447124|gb|EDP24119.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
Length = 200
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQI-GEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ E L + + G ++ +S+ +Q+ I + +++ + + NT
Sbjct: 56 NRLDTTVEYLNKHKNAKAVLCGGKENNNELSQAEYMQRYLIEKGISKERLIAETNSKNTY 115
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + A +K +++++ DYH+ R L L R
Sbjct: 116 ENIKFALEKLDKKP-SEIMVISSDYHLFRAKLILYR 150
>gi|1161522|emb|CAA87766.1| SanA [Escherichia coli K-12]
Length = 180
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T + + N+F +I+T +H R
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|304397080|ref|ZP_07378959.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355229|gb|EFM19597.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 260
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 23/127 (18%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDI 78
V IVVL G R+ + +G +
Sbjct: 78 KVDYIVVLGGGYTFNPGWAPSSNLLNNSLPRVAEGVRQWRRNPQSTLIFTGAAGGTNPKS 137
Query: 79 ---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ ++ + I I + +T A EA A +++VT HMPR
Sbjct: 138 SAWVAAQVAESLGVPHEHIQILDQPRDT---ADEAQAVKTVAGNRPLMLVTSANHMPRAI 194
Query: 136 LELQRIN 142
+
Sbjct: 195 RFFHAVG 201
>gi|228472898|ref|ZP_04057655.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275480|gb|EEK14257.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
Length = 206
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A L + Q + I ISG + D +++ + + E I + Y T +
Sbjct: 64 RVEAAAALFKAQKVDFILISGDNSRQGYDEPTDMKEALVAMGIPEGKIYLDYAGFRTLDS 123
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + + +V+ +H R
Sbjct: 124 VVRAKEIF---DLTALTVVSQAFHDERAIY 150
>gi|194738259|ref|YP_002116179.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197301016|ref|ZP_02662980.2| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194713761|gb|ACF92982.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289096|gb|EDY28465.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 210
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 56 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 115
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 116 VVRAR---KVFGESRITIISQAFHNQRAI 141
>gi|213025781|ref|ZP_03340228.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 172
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 39 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 98
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 99 VVRAR---KVFGESRITIISQAFHNQRAI 124
>gi|148974941|ref|ZP_01811921.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
gi|145965450|gb|EDK30699.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
Length = 365
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 22/111 (19%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
I ++ + A++VLTG + +H + L+
Sbjct: 213 IERLETTLAMAKANPDAMIVLTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
I + +++ I A +T GNA +S ++N H I++ H+ R
Sbjct: 251 WLIEKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRR 301
>gi|313633948|gb|EFS00656.1| integral membrane protein [Listeria seeligeri FSL N1-067]
Length = 344
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 6 YGLFVCLIFFIMGFISFIR-------YVKQMHIPDHPSVSAIVV---LTGE-------PI 48
G+ + I ++G+ SF+ ++ Q + P + IV+ L G
Sbjct: 126 LGIVIVFIVTLVGYFSFLFLSFLLSTFIYQYNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFELLENQIGEK-----IFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R++RA E Q+ +K +SG + +S+ ++ I + + E I + K+
Sbjct: 186 RLDRAIAFYEKQLAKKGKRATFIVSGGQGDNEIISEAEAMRGYLISKGIDETFIIMENKS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
+NT N Q + + ++ + T+++H+ R L ++
Sbjct: 246 VNTLQNMQFSKKKMDAIMPEYNSLFS-TNNFHLFRASLYARKAG 288
>gi|330470019|ref|YP_004407762.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
gi|328812990|gb|AEB47162.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
Length = 242
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A EL + I +SG ++ ++ +Q+ + + + + Y +T +
Sbjct: 91 RLEIARELYATGKVQAILVSGDNMNADYNEPEAMQRWLVEHGVPADKVVLDYAGFDTYDS 150
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
A +VT +H+ R + +
Sbjct: 151 CARAKRIF---GVERATVVTQQFHLARAVTVCRHLGVDA 186
>gi|205354136|ref|YP_002227937.1| hypothetical protein SG3118 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273917|emb|CAR38919.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629256|gb|EGE35599.1| hypothetical protein SG9_3160 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 230
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|197265831|ref|ZP_03165905.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205357549|ref|ZP_02571321.2| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|197244086|gb|EDY26706.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205331121|gb|EDZ17885.1| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|321225905|gb|EFX50959.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 210
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ + + + E I Y +T +
Sbjct: 56 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPEAAIFCDYAGFSTLDS 115
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 116 VVRAR---KVFGESRITIISQAFHNQRAI 141
>gi|163816062|ref|ZP_02207432.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
gi|158448872|gb|EDP25867.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
Length = 282
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA-IVVLT-----GEPI-----RIERAF 54
+ + L+ + + I Y P A +VVL G P R+ A
Sbjct: 98 LSIVLALVTIALALVVVITYHMVYAAHVKPKQDATVVVLGCAVRGGGPSLMLRERLIAAQ 157
Query: 55 ELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ L+ +SG S+S+ + + ++ I + K+ +T N + ++
Sbjct: 158 DYLDENPEAVCVVSGGQGADESMSEAQCMYEYLTEHGISPERIYMEDKSTSTRENIKFSA 217
Query: 112 AWAEKNNF-HHVLIVTHDYHMPRT 134
E+N+ + IVT+++H R
Sbjct: 218 QIIEQNDLPDGMNIVTNEFHEYRA 241
>gi|332534944|ref|ZP_08410763.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035617|gb|EGI72108.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 254
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 23/150 (15%)
Query: 34 HPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGV-HHSVS 75
HP + IVVL + R+ L ++ ++ +SG + +++
Sbjct: 75 HPKIDKIVVLGCDINPNPALSANNQLGNCALTRLVEGVRLAKHYPNAELIVSGGGYKNIT 134
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
L+ + I + + I KA++T +EA A K V +VT HMPR
Sbjct: 135 NSGLMYQTAISLGVNKSRIFQNPKAMDT---GEEAKLLASKLVDFKVALVTSVLHMPRAK 191
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFK 165
++ I H+ +
Sbjct: 192 DLFNA--QGIEVITAATDYHNFAALPWSKQ 219
>gi|291459679|ref|ZP_06599069.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417711|gb|EFE91430.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 260
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFI------RYVKQMHIPDHPSVSAIVVLTGEPIRIERAF 54
+ F LF+ + + ++G F Y+ + PS A V+ +R++RAF
Sbjct: 79 LGIFTGLLFLLVSWCLIGTEFFSRGEEKLDYLVVLGAQVRPSGPAAVL----RLRLDRAF 134
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +SG + S+ ++ +R+ ++ I + ++ NT N ++
Sbjct: 135 AYLSENPETLCIVSGGKGQNEPCSEAEAMRDYLLRRGISAERILLEDQSKNTRENIANSA 194
Query: 112 AWAEKNNFHHVLIVTHDYHMPR 133
V I++ D+H+ R
Sbjct: 195 RLLNPER-DRVGILSSDFHVYR 215
>gi|322613625|gb|EFY10566.1| hypothetical protein SEEM315_07855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621218|gb|EFY18076.1| hypothetical protein SEEM971_20584 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624281|gb|EFY21115.1| hypothetical protein SEEM973_20700 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627981|gb|EFY24770.1| hypothetical protein SEEM974_20590 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633099|gb|EFY29841.1| hypothetical protein SEEM201_11685 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636324|gb|EFY33032.1| hypothetical protein SEEM202_14388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643499|gb|EFY40061.1| hypothetical protein SEEM954_04770 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647610|gb|EFY44098.1| hypothetical protein SEEM054_00615 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648592|gb|EFY45039.1| hypothetical protein SEEM675_03746 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653644|gb|EFY49970.1| hypothetical protein SEEM965_21391 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657752|gb|EFY54020.1| hypothetical protein SEEM19N_17516 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663853|gb|EFY60052.1| hypothetical protein SEEM801_03806 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669136|gb|EFY65287.1| hypothetical protein SEEM507_10771 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672871|gb|EFY68978.1| hypothetical protein SEEM877_00015 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678139|gb|EFY74202.1| hypothetical protein SEEM867_02802 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681315|gb|EFY77348.1| hypothetical protein SEEM180_21294 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687755|gb|EFY83722.1| hypothetical protein SEEM600_15091 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195567|gb|EFZ80744.1| hypothetical protein SEEM581_10355 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199752|gb|EFZ84842.1| hypothetical protein SEEM501_16935 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202500|gb|EFZ87540.1| hypothetical protein SEEM460_17505 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208012|gb|EFZ92958.1| hypothetical protein SEEM020_19130 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212436|gb|EFZ97253.1| hypothetical protein SEEM6152_09408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215082|gb|EFZ99830.1| hypothetical protein SEEM0077_03989 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222812|gb|EGA07177.1| hypothetical protein SEEM0047_10245 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224107|gb|EGA08400.1| hypothetical protein SEEM0055_22220 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230431|gb|EGA14549.1| hypothetical protein SEEM0052_19224 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235217|gb|EGA19303.1| hypothetical protein SEEM3312_06763 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239258|gb|EGA23308.1| hypothetical protein SEEM5258_06650 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244384|gb|EGA28390.1| hypothetical protein SEEM1156_00557 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247001|gb|EGA30967.1| hypothetical protein SEEM9199_20625 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254066|gb|EGA37886.1| hypothetical protein SEEM8282_00135 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256177|gb|EGA39913.1| hypothetical protein SEEM8283_11271 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262647|gb|EGA46203.1| hypothetical protein SEEM8284_02776 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267257|gb|EGA50741.1| hypothetical protein SEEM8285_20762 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269341|gb|EGA52796.1| hypothetical protein SEEM8287_11652 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 230
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|300362750|ref|ZP_07058925.1| integral membrane protein [Lactobacillus gasseri JV-V03]
gi|300353178|gb|EFJ69051.1| integral membrane protein [Lactobacillus gasseri JV-V03]
Length = 373
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 28/158 (17%)
Query: 5 WYGLFVCLIFFIMGFISFIRY------VKQMHIPDHPSVSAIVVLTGE-----------P 47
W V I ++ F+ Y V +P ++VL
Sbjct: 146 WLHSLVAGAALIAFYLLFVMYNFLLNLVLYQIVPRRYKQDYLIVLGAGLIDGKKVSRLLG 205
Query: 48 IRIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RI+RA Q + K+ +SG +S+ ++ +++ I + K
Sbjct: 206 SRIDRAIAFSNKQYDKGHKRPKLIMSGGQGKDEDLSEAEAMKDYAVKRGYDPDLILLEDK 265
Query: 100 ALNTEGNAQEA-SAWAEKNNFHHVLI--VTHDYHMPRT 134
+ NT N + + + + T++YH+ R
Sbjct: 266 STNTYQNMVYSKAVAIKDYGNEKFKVKFFTNNYHLFRA 303
>gi|290558802|gb|EFD92195.1| protein of unknown function DUF218 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 193
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 39 AIVVLTGEPI--RIERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCID 95
AIVVL G R+E+A + ISG K K +
Sbjct: 33 AIVVLGGPKQDKRLEKALYEYNKDKSAALIISGFGKDFEKKTEYTAKGKGLDSILN---- 88
Query: 96 IGYKALNTEGNAQEASAWAEKN--NFHHVLIVTHDY-HMPRTFLELQR 140
+++NTE NA+ + +N N + + IV DY PR + +
Sbjct: 89 -ENESINTEDNARNSLYLIRENLPNINEITIV-SDYAQQPRAEMLFNK 134
>gi|194471333|ref|ZP_03077317.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197248296|ref|YP_002148153.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|194457697|gb|EDX46536.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197211999|gb|ACH49396.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 230
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|116265981|gb|ABJ91238.1| ACC deaminase [Pseudomonas plecoglossicida]
Length = 336
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ GV S
Sbjct: 169 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRAQRVI--GVDASA 225
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
+ +I +D+G +
Sbjct: 226 KPEQTKAQILRIARHTAKLVDLGREIT 252
>gi|16761994|ref|NP_457611.1| hypothetical protein STY3402 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143481|ref|NP_806823.1| hypothetical protein t3142 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|167553271|ref|ZP_02347021.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168243055|ref|ZP_02667987.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194442486|ref|YP_002042489.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194450555|ref|YP_002047259.1| hypothetical protein SeHA_C3517 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|213053187|ref|ZP_03346065.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213427203|ref|ZP_03359953.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213583081|ref|ZP_03364907.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213621929|ref|ZP_03374712.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213646097|ref|ZP_03376150.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|238910024|ref|ZP_04653861.1| SanA protein [Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|25306413|pir||AD0894 conserved hypothetical protein STY3402 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504297|emb|CAD07746.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139115|gb|AAO70683.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194401149|gb|ACF61371.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194408859|gb|ACF69078.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205322260|gb|EDZ10099.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205337915|gb|EDZ24679.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|320087676|emb|CBY97440.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|326624979|gb|EGE31324.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 230
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|289808951|ref|ZP_06539580.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 203
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 56 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 115
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 116 VVRAR---KVFGESRITIISQAFHNQRAI 141
>gi|154502819|ref|ZP_02039879.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
gi|153796702|gb|EDN79122.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
Length = 264
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 17/145 (11%)
Query: 7 GLFVCLI-FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF C+ +I+ V+ M + ++VL G +R ER + L+ ++ +
Sbjct: 76 LLFFCVAGIWILFLAVEFFIVRAMRPGRKKNCRYLIVL-GAQVRGERITDSLKRRLDAAL 134
Query: 66 F-----------ISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+SG VS+ + + ++ + I + ++ T N + +
Sbjct: 135 LYHQVCPSVKIIVSGGQGKGEDVSEAYAMAQYLREHEVKDEQIMLEDQSRTTRENLRFSK 194
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
A+ E+ V IVT+++H+ R L
Sbjct: 195 AYLEELK-TPVGIVTNNFHLFRALL 218
>gi|152993110|ref|YP_001358831.1| hypothetical protein SUN_1523 [Sulfurovum sp. NBC37-1]
gi|151424971|dbj|BAF72474.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 201
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEK--I 65
F C++F +G +++ P I+ L G RI++A L K +
Sbjct: 16 FFCIVFANLG-----KWLDVTDKPVES--DIIICLGGGDYHRIDKAIALYRAGYSMKHLL 68
Query: 66 FISGVHHS-VSKDILLQKIPIRQDLAECCIDIGYK----ALNTEGNAQEASAWAEKNNFH 120
++G + V K + +R L + I Y L+T + +
Sbjct: 69 VLTGDDVTPVRKRAGYKDFRVRL-LEKKYTTIPYSHVPGLLSTREEVLFIKRYMLSRGYR 127
Query: 121 HVLIVTHDYHMPR 133
LIV+ H+ R
Sbjct: 128 SALIVSDPPHLGR 140
>gi|153214581|ref|ZP_01949468.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115279|gb|EAY34099.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 312
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP S + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQSPQGLRFLWVDELTTYRVFL 193
>gi|312881337|ref|ZP_07741134.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370977|gb|EFP98432.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 365
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ +L + I ++G +K L+ + + + I A +T G
Sbjct: 214 ERLMTTLKLAKENPDALIILTGGVPKNNKTEGKLMADWLVGKGINPNRIIEENYATSTVG 273
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S ++ H I++ H+ R T E+
Sbjct: 274 NALFSSYALARHKIKHATIISSASHVRRGQTLFEIA 309
>gi|262164725|ref|ZP_06032463.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
gi|262027105|gb|EEY45772.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
Length = 363
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E E+ + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLEMAKANPDAMIILTGGVPQNHKTEGKLMADWLIERGVSATRIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---QRINSTVQF--IPYP 151
A +S ++ H I++ H+ R T E+ Q + F + YP
Sbjct: 273 ALFSSYALARHGIKHATIISSASHVRRGQTLFEVASWQTGPKGITFDTVSYP 324
>gi|333025430|ref|ZP_08453494.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
gi|332745282|gb|EGJ75723.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
Length = 198
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 22/150 (14%)
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTE 104
RA EL + + +G + + + ++ I D+ I + A NT
Sbjct: 24 RAAELYHAGLFPTLVFTGGNSPTTAKVFPRGEAVHFREHAIDLDVPASAILLEPHAANTG 83
Query: 105 GNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
N A VL+V+ Y R++ +++ + + S LE +
Sbjct: 84 QNITLAREVLADAGITPEKVLLVSKPYMERRSYATARKLWPEAEMV---CASETLEFDDY 140
Query: 163 IFKIKILRVL----------LIEYLKILLL 182
+ I +++ +IEY K+
Sbjct: 141 LKSIGDEKLVVDMLVGDLQRVIEYPKLGFA 170
>gi|212634481|ref|YP_002311006.1| hypothetical protein swp_1641 [Shewanella piezotolerans WP3]
gi|212555965|gb|ACJ28419.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 280
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 13/142 (9%)
Query: 46 EPIRIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ L ++ +SG ++ D++ I A
Sbjct: 137 GLARLSEGIRQLSLGQDCQLVVSGWSGGLNTRAHADVMFDAAVELGVNPNAIIKFP-LAK 195
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+T AQ F +VT HMPR+ + S + P +
Sbjct: 196 DTIEEAQFMQWEVADAPFR---LVTSASHMPRSMAIFEN--SGLNATAAPTDFAQRKTYW 250
Query: 162 SIFKIKIL---RVLLIEYLKIL 180
F + L + + EYL +L
Sbjct: 251 WYFDAQSLLSSQRAIHEYLGLL 272
>gi|225568301|ref|ZP_03777326.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
gi|225163020|gb|EEG75639.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
Length = 242
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++R+ L G K+ +SG +++ + + I + ++ +TE
Sbjct: 113 RLKRSAAYLSENPGTKVIVSGGQGPGEDIAEAEAMADFLADCGIKRSRILLEDRSKSTEE 172
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + ++A+ V IV++++HM R
Sbjct: 173 NLRFSAAYLPDMTVK-VGIVSNNFHMYRA 200
>gi|56415161|ref|YP_152236.1| hypothetical protein SPA3090 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364091|ref|YP_002143728.1| hypothetical protein SSPA2886 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129418|gb|AAV78924.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095568|emb|CAR61133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 230
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ I + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALIAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|2570211|emb|CAA05289.1| Sfi protein [Salmonella typhimurium]
Length = 187
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 11/93 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID-----IGYKALNT 103
RI+ A + + +SG + + I +R+DL +D + Y T
Sbjct: 69 RIQGALNAYNSGKVNYLLLSG---DNALQSYYEPITMRKDLIAAGVDPADIVLDYAGFRT 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + N+F +I+T +H R
Sbjct: 126 LDSIVRTRKVFDTNDF---IIITQRFHCERALF 155
>gi|325284148|ref|YP_004256689.1| hypothetical protein Deipr_1940 [Deinococcus proteolyticus MRP]
gi|324315957|gb|ADY27072.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 212
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 7/132 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL I ++G + + R+ + + ++ T
Sbjct: 54 RLDHALELYRAGGVHTIVVTGGRQAGDPYTEGGVGV-SYLQRRGVPAEVLKAEERSRTTA 112
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
N A+ + V +VT H PR + I P P+ H
Sbjct: 113 QNLNYAAELLPPHA--AVTVVTDRAHAPRALAMARDIGFNANASPSPLWPHASLRYRLRE 170
Query: 165 KIKILRVLLIEY 176
++ +L++Y
Sbjct: 171 RLAWAAYMLLDY 182
>gi|213966359|ref|ZP_03394540.1| transporter [Corynebacterium amycolatum SK46]
gi|213951008|gb|EEB62409.1| transporter [Corynebacterium amycolatum SK46]
Length = 202
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLA 90
+P SA VLT R+E A L + ++G ++ ++ +
Sbjct: 79 NPDCSAPAVLT---SRLETARSLALRHPLNPVIVTGGRTQPGCQTEAEYMRDALASMGVW 135
Query: 91 ECCIDIGYKALNTEGNAQEASAWAE--KNNFHHVLIVTHDYHMPRT 134
+ I + + +T NA + AE + +IVT H PR
Sbjct: 136 KRRITMETNSDSTVENAAGTAYLAESGTSGVRAAVIVTSPTHTPRA 181
>gi|157963152|ref|YP_001503186.1| hypothetical protein Spea_3336 [Shewanella pealeana ATCC 700345]
gi|157848152|gb|ABV88651.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 165
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
T +A + E++ F + +VT ++H+PR L +I
Sbjct: 85 TFEDAILSKPIVEEHGFRELCLVTSEFHLPRARLIFSQI 123
>gi|262403290|ref|ZP_06079850.1| TPR repeat-containing protein [Vibrio sp. RC586]
gi|262350789|gb|EEY99922.1| TPR repeat-containing protein [Vibrio sp. RC586]
Length = 363
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E + + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLAMAKANPDAVIILTGGVPQNHKTEGKLMADWLIERGVSTTRIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---QRINSTVQF--IPYP 151
A +S ++ H I++ H+ R T E+ Q + F + YP
Sbjct: 273 ALFSSYALARHGIKHATIISSASHVRRGQTLFEIASWQTGPKGITFDTVSYP 324
>gi|93006297|ref|YP_580734.1| hypothetical protein Pcryo_1471 [Psychrobacter cryohalolentis K5]
gi|92393975|gb|ABE75250.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 257
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI--PYPIIS 154
++NT NA+ + ++ HHV ++T YHM R + I P P+I
Sbjct: 144 ENASMNTCENARFTA---KRIPLHHVYLITDSYHMARARRQFALNGINSTAINAPLPVIR 200
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+E + R + E L I+
Sbjct: 201 DWMEPA---QNLSHSRRAVYEVAAYLRDVIR 228
>gi|72161268|ref|YP_288925.1| hypothetical protein Tfu_0864 [Thermobifida fusca YX]
gi|71915000|gb|AAZ54902.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 315
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 21/150 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
+R L + +I +++ Y + + P AIVVL G R
Sbjct: 115 VRRTVALLVLTVILLPCATWAWVWYTARQD--ERPPSDAIVVL-GASQYNGRPSPVFEAR 171
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY-----KALNTE 104
+ A L E + + G + D + + L E + K +T
Sbjct: 172 LRHAAHLYEEGVAPTVVTVGGNQ--PGDNFTEGGSGARWLVEQGVPADSVIPIGKGSDTL 229
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + E+ + +IV+ +H R+
Sbjct: 230 ESLELVAQVFEERGWRTAVIVSDPWHSLRS 259
>gi|330448460|ref|ZP_08312108.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492651|dbj|GAA06605.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 365
Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 24/154 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + A++VLTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDALIVLTGG---VPM------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQR 140
I + + + I A +T NA +S +++ H I++ H+ R T E+
Sbjct: 251 WLIEKGINKDRIIEENYATSTVDNALFSSYALARHHIKHATIISSASHVRRGQTLFEIAS 310
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+ Q I + +S+ + + +L I
Sbjct: 311 WQTGPQNITFDTVSYPDKPLKELTTPSDSELLGI 344
>gi|308275076|emb|CBX31675.1| hypothetical protein N47_E51870 [uncultured Desulfobacterium sp.]
Length = 243
Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--PIRIERAFELLENQ 60
Y + + + ++F ++ F + Y + AI++ G R + A++LLE
Sbjct: 7 YMAFIIGLSIVFLVLFFPQILVYTNR-----PVKSDAIILFAGPDFKNRQQEAYQLLEEG 61
Query: 61 IGEKIFI 67
+ I
Sbjct: 62 YARFLLI 68
>gi|119487320|ref|ZP_01621071.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
gi|119455875|gb|EAW37010.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
Length = 328
Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVHHS-----VSKDILLQKIPIRQDLAECCID 95
V LT RI A +L ++ + + +S + V + + ++ + + I
Sbjct: 160 VQLTRIGDRIPYAAKLYKDGLAPLMIVSAGSRNEYLQPVVEADYIARLLVGMGVPSRSIL 219
Query: 96 IGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+A A+K + +++VT M R L + + IP P
Sbjct: 220 KDTSEGTLYDSAVSIQQIAKKQDLGRAIILVTSGLEMRRASLTFASV--GFKVIPAP 274
>gi|117618289|ref|YP_855049.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559696|gb|ABK36644.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 341
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A EL N + I +SG + +V + +++ I+ + I Y T +
Sbjct: 86 RIKAAAELYNNGKVDYILVSGDNATVQYNEPRQMRRALIQAGIPANAIYSDYAGFRTLDS 145
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + +F +V+ +H R
Sbjct: 146 IVRAKEVFGQAHFT---VVSQAFHNERAIF 172
>gi|227533012|ref|ZP_03963061.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227189413|gb|EEI69480.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 352
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 29/156 (18%)
Query: 8 LFVCLIFFIMGF--------ISFIRYVKQMHIPDHPSVSAIVVLTG---E-------PIR 49
+ + F + GF + + H IV+ G R
Sbjct: 133 FSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPHNRTFLIVLGAGLLHGDQVSPLLASR 192
Query: 50 IERAFELLENQI-----GEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
I+ A + QI +I SG ++S+ + +Q+ + + +AE + ++
Sbjct: 193 IDAAIKFYRKQIKKGRPAPRIIFSGGKGSDEAISEAMAMQRYALGKGIAEGDTLLEDQST 252
Query: 102 NTEGNAQEASAWAEKNNFHHVL---IVTHDYHMPRT 134
T N Q + + T++YH+ R
Sbjct: 253 TTLENMQFSKRLITQEIGESPYKASFFTNNYHLFRA 288
>gi|188534261|ref|YP_001908058.1| hypothetical protein ETA_21340 [Erwinia tasmaniensis Et1/99]
gi|188029303|emb|CAO97180.1| Conserved hypothetical protein YcbC [Erwinia tasmaniensis Et1/99]
Length = 262
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 27/173 (15%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---------------- 48
W L + + + + + + + IVVL G
Sbjct: 47 WLVLLLISLQPVADRLLAPLENRYPSWHNQQPLDYIVVLGGGYTWNPQWAPSSNMLNNSL 106
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ + K+ +G + + + + + I + +TE
Sbjct: 107 PRLAEGIRIWHENPRAKLIFTGGKAQGNPLSSAAVTANTARSLGIPDGAMIILDRPRDTE 166
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
A E + F +VT H+PR L Q+ P+P ++ L
Sbjct: 167 QEAHEVAKIVTNRPF---ALVTSANHLPRAMLYFQQEG----LQPWPAPANQL 212
>gi|16766521|ref|NP_462136.1| integral membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161616217|ref|YP_001590182.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|16421779|gb|AAL22095.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161365581|gb|ABX69349.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|261248389|emb|CBG26226.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995419|gb|ACY90304.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159774|emb|CBW19293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914249|dbj|BAJ38223.1| hypothetical protein STMDT12_C32800 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323131582|gb|ADX19012.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990087|gb|AEF09070.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 230
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A L + + +SG + + +Q+ + + + E I Y +T +
Sbjct: 76 RINTAAALYHAGKVKWLLVSGDNGKKEYDEPSAMQQALMAKGVPEAAIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + I++ +H R
Sbjct: 136 VVRAR---KVFGESRITIISQAFHNQRAI 161
>gi|229528571|ref|ZP_04417962.1| hypothetical protein VCG_001658 [Vibrio cholerae 12129(1)]
gi|229334933|gb|EEO00419.1| hypothetical protein VCG_001658 [Vibrio cholerae 12129(1)]
Length = 314
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLADRCVQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|308048831|ref|YP_003912397.1| hypothetical protein Fbal_1114 [Ferrimonas balearica DSM 9799]
gi|307631021|gb|ADN75323.1| protein of unknown function DUF218 [Ferrimonas balearica DSM 9799]
Length = 243
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 10/143 (6%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + + +SG L++ I Q + E I +A +TE
Sbjct: 105 GRLMEGIRVWRANPDATLVLSGFAGSDPTPHAELMKCAAIEQGVPESHIHTFPQARDTEQ 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
A+ + ++VT HM R Q + P + F
Sbjct: 165 EARLTAPLV---GAAPAVLVTSASHMDRALSLYQA--QGLSVTPAATDFIAQPTRAWYFS 219
Query: 166 IKILR---VLLIEYLKILLLSIQ 185
+ L ++ EYL L L+I+
Sbjct: 220 ARNLWTSQRVIHEYLGQLWLAIK 242
>gi|116630379|ref|YP_819532.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238852784|ref|ZP_04643190.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282850700|ref|ZP_06260075.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311111615|ref|ZP_07713012.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095961|gb|ABJ61113.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238834634|gb|EEQ26865.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282558108|gb|EFB63695.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311066769|gb|EFQ47109.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 373
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 30/159 (18%)
Query: 5 WYGLFVCLIFFIMGFISFIRY------VKQMHIPDHPSVSAIVVLTGE-----------P 47
W V I ++ F+ Y V +P ++VL
Sbjct: 146 WLHSLVAGAALIAFYLLFVMYNFLLNLVLYQIVPRRYKQDYLIVLGAGLINGKKVSRLLG 205
Query: 48 IRIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RI+RA Q + K+ +SG +S+ ++ +++ I + K
Sbjct: 206 SRIDRAIAFSNKQYDKGHKRPKLIMSGGQGKDEDLSEAEAMKNYAVKRGYDPDLILLEDK 265
Query: 100 ALNTEGNAQEASAWAEKNNFHH----VLIVTHDYHMPRT 134
+ NT N + A ++ T++YH+ R
Sbjct: 266 STNTYQNMIYSKA-VAIKDYGSDKFKAKFFTNNYHLFRA 303
>gi|77360123|ref|YP_339698.1| enzyme [Pseudoalteromonas haloplanktis TAC125]
gi|76875034|emb|CAI86255.1| conserved protein of unknown function ; putative enzyme
[Pseudoalteromonas haloplanktis TAC125]
Length = 242
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 49/151 (32%), Gaps = 11/151 (7%)
Query: 49 RIERAFELLENQIGEKIFISGV-HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
R+ +L + ++ +SG + V+ L+ I + + + A++T A
Sbjct: 95 RLVEGIKLAKLYPNAQLIVSGGGYQKVTNSSLMYNTAINLGINKNRLVQNPAAMDTPAEA 154
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI- 166
+ + V +VT HMPR V+ I H+ ++
Sbjct: 155 RLLAPTLVDYK---VALVTSVLHMPRAKDLFNA--QGVEVITAATDYHNFAVLPWHKQLV 209
Query: 167 --KILRVLLIEYLKILL--LSIQLSLSTQTA 193
++ +Y ++ I +
Sbjct: 210 PNAQALHVVTQYSHEVVGKAWISMRRWIDPE 240
>gi|261344282|ref|ZP_05971926.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282567885|gb|EFB73420.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 268
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 45/148 (30%), Gaps = 28/148 (18%)
Query: 31 IPDHPSVSA--IVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVH 71
I D+P IVVL G R+ L G K+ +G
Sbjct: 77 ITDNPPSDVKYIVVLGGGFTYNPDWSPSSNLLSNSLPRVTEGVRLYLQHPGSKLIFTGGK 136
Query: 72 HSVSKD--ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
S SK + + + + +T+ A E K F L+VT
Sbjct: 137 ASSSKSSAEVAAMVAQSLGVPAQDTLPLTEPKDTQEEAFEVEKIIGKQPF---LLVTSAN 193
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDL 157
H+PR PYP ++ L
Sbjct: 194 HLPRALKMFTSRG----MQPYPAPANQL 217
>gi|258652152|ref|YP_003201308.1| hypothetical protein Namu_1930 [Nakamurella multipartita DSM 44233]
gi|258555377|gb|ACV78319.1| protein of unknown function DUF218 [Nakamurella multipartita DSM
44233]
Length = 203
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 58/165 (35%), Gaps = 20/165 (12%)
Query: 33 DHPSVSAIVVL-----TGEPI-----RIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
+ + AIVVL G+P R++ A EL + +I G V + ++
Sbjct: 34 ERAAADAIVVLGAAQYNGDPSPVFQARLDHAAELYRAGVAPRIVTVGGGQVDDATTEGAA 93
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + + +T + + A+ + V++VT H R+ L +
Sbjct: 94 GAAYLQAAGIDRAALTAVGEGGDTLASLRAAAPVLAELGVSSVVLVTDPAHSARSALMAR 153
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ + + + + + ++ L E L +L +
Sbjct: 154 DLG-------WTVQTSPVRQGPAVRDSVHAEYQLRETLGLLYYRV 191
>gi|145299864|ref|YP_001142705.1| hypothetical protein ASA_2954 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852636|gb|ABO90957.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 367
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 28/120 (23%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE--PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ 81
++ + +A+++LTG R +L+ + + GV S
Sbjct: 216 GRLETTRSLAQANPAALIILTGGVPQNRQTEG-KLMAD----WLVKKGVDRS-------- 262
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I A +T NA + ++ + +V+ H+ R T LE+
Sbjct: 263 -----------RIIEENYATSTVENALYSGYALARHQIQYATLVSSASHVRRGQTLLEIA 311
>gi|153828762|ref|ZP_01981429.1| hypothetical protein A59_1503 [Vibrio cholerae 623-39]
gi|148875809|gb|EDL73944.1| hypothetical protein A59_1503 [Vibrio cholerae 623-39]
Length = 317
Score = 39.8 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|228945317|ref|ZP_04107672.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228814289|gb|EEM60555.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 159
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 37 VSAIVVLTGEPI------------RIERAFELLENQIGEKIFISGV---HHSVSKDILLQ 81
I+VL R+++A E L++ +SG +S+ + ++
Sbjct: 7 ADYIIVL--GSKVNGTKPSYSLQYRMDKAAEYLKSHEKAIAIVSGGKGKGEDISEALAMK 64
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ ++AE I + K+ +T+ N + + N +IVT+D+HM R
Sbjct: 65 NELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDN-MKKGMIVTNDFHMFRA 116
>gi|15601354|ref|NP_232985.1| hypothetical protein VCA0595 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121587472|ref|ZP_01677240.1| hypothetical protein VC274080_A0643 [Vibrio cholerae 2740-80]
gi|121725901|ref|ZP_01679201.1| hypothetical protein VCV52_A0551 [Vibrio cholerae V52]
gi|147671424|ref|YP_001215378.1| hypothetical protein VC0395_0539 [Vibrio cholerae O395]
gi|153817945|ref|ZP_01970612.1| hypothetical protein A5C_A0776 [Vibrio cholerae NCTC 8457]
gi|227812163|ref|YP_002812173.1| hypothetical protein VCM66_A0554 [Vibrio cholerae M66-2]
gi|229506234|ref|ZP_04395743.1| hypothetical protein VCF_001450 [Vibrio cholerae BX 330286]
gi|229509907|ref|ZP_04399387.1| hypothetical protein VCE_001308 [Vibrio cholerae B33]
gi|229516532|ref|ZP_04405979.1| hypothetical protein VCC_000547 [Vibrio cholerae RC9]
gi|229605774|ref|YP_002876478.1| hypothetical protein VCD_000722 [Vibrio cholerae MJ-1236]
gi|254849755|ref|ZP_05239105.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255746627|ref|ZP_05420574.1| hypothetical protein VCH_003020 [Vibrio cholera CIRS 101]
gi|262158781|ref|ZP_06029894.1| hypothetical protein VIG_002019 [Vibrio cholerae INDRE 91/1]
gi|262168448|ref|ZP_06036144.1| hypothetical protein VIJ_001634 [Vibrio cholerae RC27]
gi|298499406|ref|ZP_07009212.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9658007|gb|AAF96497.1| hypothetical protein VC_A0595 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548307|gb|EAX58373.1| hypothetical protein VC274080_A0643 [Vibrio cholerae 2740-80]
gi|121631666|gb|EAX64034.1| hypothetical protein VCV52_A0551 [Vibrio cholerae V52]
gi|126511483|gb|EAZ74077.1| hypothetical protein A5C_A0776 [Vibrio cholerae NCTC 8457]
gi|146313807|gb|ABQ18347.1| hypothetical protein VC0395_0539 [Vibrio cholerae O395]
gi|227011305|gb|ACP07516.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227015344|gb|ACP11553.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229346413|gb|EEO11384.1| hypothetical protein VCC_000547 [Vibrio cholerae RC9]
gi|229352352|gb|EEO17292.1| hypothetical protein VCE_001308 [Vibrio cholerae B33]
gi|229356585|gb|EEO21503.1| hypothetical protein VCF_001450 [Vibrio cholerae BX 330286]
gi|229372260|gb|ACQ62682.1| hypothetical protein VCD_000722 [Vibrio cholerae MJ-1236]
gi|254845460|gb|EET23874.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736381|gb|EET91779.1| hypothetical protein VCH_003020 [Vibrio cholera CIRS 101]
gi|262022977|gb|EEY41682.1| hypothetical protein VIJ_001634 [Vibrio cholerae RC27]
gi|262029354|gb|EEY48005.1| hypothetical protein VIG_002019 [Vibrio cholerae INDRE 91/1]
gi|297541387|gb|EFH77438.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 317
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|301025123|ref|ZP_07188716.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299880175|gb|EFI88386.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 230
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ L + + +SG + + + +Q+ I + + I Y +T +
Sbjct: 76 RIDTVAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDS 135
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A +N+ I++ ++H R
Sbjct: 136 VVRAKKVFGENHIT---IISQEFHNQRAI 161
>gi|326789428|ref|YP_004307249.1| hypothetical protein Clole_0304 [Clostridium lentocellum DSM 5427]
gi|326540192|gb|ADZ82051.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 239
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAF 54
F I +G SFI + +P + I+VL R+E A+
Sbjct: 59 AFFAIGILVFVGVESFIVWSGVKSVPGE-ACDFIIVL--GAQVRGDTPSVTLQYRLESAY 115
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+ L K +SG ++ +++ + + + E + + ++ +T N + +
Sbjct: 116 DYLMVNPQTKAVLSGGQGPDEITTEAEAMRRYLVEKGIEEERLILEEQSTSTYENLKYSF 175
Query: 112 AWAEK-NNFHHVLIVTHDYHMPRTFL 136
A ++ +V IVT+ +H+ R +
Sbjct: 176 AIIDEIKANSNVSIVTNRFHVLRARM 201
>gi|310826960|ref|YP_003959317.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
gi|308738694|gb|ADO36354.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
Length = 346
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 22/168 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS--VSAIVVL-----TGE-----PIRI 50
+ L + ++FF FISF ++ + PS I++L G+ R+
Sbjct: 129 LIYSMLAIVVLFFGFLFISFAN-ASALYYFNKPSYNEDFILILGCRVIDGKVTPLLAKRL 187
Query: 51 ERAFELLEN-----QIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
RA E K +SG SVS+ ++++ + + + I + + N
Sbjct: 188 NRAIAFYEKQMEMTGKKAKFVVSGGKGMDESVSEALVMKDYLLSKGYHKSDILVEEHSRN 247
Query: 103 TEGNAQEASAWAEK-NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
T N + A ++ + VT +H+ R L + +P
Sbjct: 248 TRENMLFSKAIIDRLKPNARGIFVTSSFHVLRASLYARDAELDFTGVP 295
>gi|197248860|ref|YP_002145083.1| hypothetical protein SeAg_B0110 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212563|gb|ACH49960.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 165
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 39 AIVVLTGEPI---------RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIR 86
AIV G R++ A L + I + ++G + +VS + ++ +
Sbjct: 74 AIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLE 133
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ + I I ++ T N + A + +
Sbjct: 134 KGIPVKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|229085219|ref|ZP_04217462.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
gi|228698086|gb|EEL50828.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
Length = 185
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A + + K+ +SG + + ++ I+ + E I I ++ +T
Sbjct: 56 QNRLDVALMYVNSHPEAKVIVSGGQGEDEDIPEAHSMRNYLIQHGIEEGRIFIEDRSTST 115
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + + H ++V++ YH+ RT
Sbjct: 116 YENLKFSMDL---YHVKHAVVVSNTYHLYRT 143
>gi|148980444|ref|ZP_01816066.1| hypothetical protein VSWAT3_04886 [Vibrionales bacterium SWAT-3]
gi|145961247|gb|EDK26560.1| hypothetical protein VSWAT3_04886 [Vibrionales bacterium SWAT-3]
Length = 215
Score = 39.8 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 10/119 (8%)
Query: 36 SVSAIVVLTGEPIRIER-AFELLENQIGEKIFISG-VHHSV------SKDILLQKIPIRQ 87
I VL R+ A EL +I I SG V S+ I
Sbjct: 28 PSDCIFVLCSNDTRVAEYAAELYHQKIAPYIVFSGGVGRFTEGNFDRSEAETFAAIARDS 87
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINST 144
+ E I I +A NT N + + + +V + RT+ +
Sbjct: 88 GVPESDIIIEKQATNTGENVRFTYELLTECGLSPKKLTLVQKPFMEKRTYATFSKQWPE 146
>gi|256375417|ref|YP_003099077.1| hypothetical protein Amir_1279 [Actinosynnema mirum DSM 43827]
gi|255919720|gb|ACU35231.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 215
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 46 EPIRIERAFE---LLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCID 95
I A L + ++ +G + + ++ + + + I
Sbjct: 32 GSHDIGVAVRVTELYHQGVFPRVLFTGANAPTTVKRFPRGEAVHYREHALEHGVPDAAIL 91
Query: 96 IGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQF 147
I +A NT N + + A E ++++ Y R++ +++ +
Sbjct: 92 IETEATNTAENFKLSRALLEVEGVEVGSAVLISRPYQERRSYATCRKLWPELDI 145
>gi|261212701|ref|ZP_05926985.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
gi|260837766|gb|EEX64443.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
Length = 335
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E + + I ++G K L+ + D++ I A +T N
Sbjct: 185 RLETTLAMAKANPDAVIILTGGVPQNHKTEGKLMADWLVEHDVSATRIIEENYATSTVDN 244
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---QRINSTVQF--IPYP 151
A +S ++ H I++ H+ R T E+ Q + F + YP
Sbjct: 245 ALFSSYALARHGIKHATIISSASHVRRGQTLFEIASWQTGPRGITFDTVSYP 296
>gi|325263793|ref|ZP_08130526.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
gi|324030831|gb|EGB92113.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
Length = 239
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A E LE K+ +SG + +++ + + + I + +T
Sbjct: 110 RLDAACEYLEQHTDTKVIVSGGQGIGEDITEAAAMADYLEIRGIDSSRIYKEDTSTSTWE 169
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + +S +VT+++H+ R L
Sbjct: 170 NMKNSSRIIGDPR-QPCAVVTNNFHLYRALL 199
>gi|254369442|ref|ZP_04985454.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122392|gb|EDO66532.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 158
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 9/147 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI + E+ + ++I ISG +S+ + + + + + I + + NT
Sbjct: 17 YDRILKTAEVYHQHL-QQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNT 75
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
NA+ N+ + +VT H R + + I +++ +
Sbjct: 76 YQNAEFIKKILM-NDKNTYCLVTGGIHYKRAKIIFDKFAINTISIASSKFVPNIKILPNA 134
Query: 164 FKIKILRVLLIEYLKILLLSIQLSLST 190
+ I + ++ EYL I I++ LS+
Sbjct: 135 YNFYITQNIVHEYLGI----IRIYLSS 157
>gi|71065507|ref|YP_264234.1| hypothetical protein Psyc_0947 [Psychrobacter arcticus 273-4]
gi|71038492|gb|AAZ18800.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 265
Score = 39.8 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++NT NA+ + ++ HHV ++T YHM R + + + I+
Sbjct: 152 ENASMNTCENARFTA---KRIPLHHVYLITDSYHMARARRQF--ALNGINSTA---INAP 203
Query: 157 LEENSSIFKIKI----LRVLLIEYLKILLLSIQ 185
L + R + E L I+
Sbjct: 204 LPVRRDWMEPAQNLSHSRRAVYEVAAYLRDVIR 236
>gi|217964896|ref|YP_002350574.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|217334166|gb|ACK39960.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|307570545|emb|CAR83724.1| membrane protein, putative [Listeria monocytogenes L99]
Length = 344
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 69/165 (41%), Gaps = 31/165 (18%)
Query: 8 LFVCLIFFIMGFISFIRYVK----------QMHIPDHPSVSAIVV---LTGE-------P 47
+ ++ F+M F+ + ++ Q + P + IV+ L G
Sbjct: 125 ILGVVVLFVMAFVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLA 184
Query: 48 IRIERAFELLENQI---GEK--IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ RA E Q G++ +SG + +VS+ ++ I + + E I + +
Sbjct: 185 SRLNRAIAFYEKQYSKTGKRATFIVSGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQ 244
Query: 100 ALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
++NT N Q + A + +++ + T+++H+ R L ++
Sbjct: 245 SVNTLQNMQFSKAKMDAIMPDYNSLFS-TNNFHLFRAGLYARKAG 288
>gi|167758901|ref|ZP_02431028.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
gi|167663641|gb|EDS07771.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
Length = 235
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ +A L+ G + +SG V++ ++ I Q +A I + T+
Sbjct: 106 RLNKALIYLKAHPGTRAVVSGGQGTGEDVTEAQAMEDYLIAQGIASYRIIKEEASTTTQE 165
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
N + + + V IV++++H+ R +R+ PYP+ +
Sbjct: 166 NLKFSKRYMNC-GEADVGIVSNNFHLYRACAYARRLGYG---HPYPLAAS 211
>gi|163816551|ref|ZP_02207915.1| hypothetical protein COPEUT_02741 [Coprococcus eutactus ATCC 27759]
gi|158448251|gb|EDP25246.1| hypothetical protein COPEUT_02741 [Coprococcus eutactus ATCC 27759]
Length = 218
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 14/127 (11%)
Query: 33 DHPSVSAIVVLTGEPIRI---ERAFELLENQIGEKIFISGVHHSVS-------KDILLQK 82
D I+ + ERA EL + G I +G ++ + +
Sbjct: 19 DVVPADGIIAF--GSHDLHVAERAAELYLSGHGRYIIFTGGLGRITQKIWHKPEANKFAE 76
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQR 140
+ I + + I I + NT N Q + V++V + R F L++
Sbjct: 77 VAIEKGVPRDVIFIENVSSNTGENIQFTKKMISDETISIDSVIVVDKPFKERRLFATLKK 136
Query: 141 INSTVQF 147
+ F
Sbjct: 137 QWPELNF 143
>gi|221195587|ref|ZP_03568642.1| integral membrane protein [Atopobium rimae ATCC 49626]
gi|221184774|gb|EEE17166.1| integral membrane protein [Atopobium rimae ATCC 49626]
Length = 346
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 30/186 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVV----LTGE------PIRIER 52
+F+ GL+ F + F ++ ++ +P H I++ L GE RI R
Sbjct: 141 FFFEGLWFSFTFVA---LLFYSWLYRI-LPRHRRYDYIIIHGAGLDGEKPTPLLAGRINR 196
Query: 53 AFELLENQIG-EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A EL + Q K SG V++ ++ + +++ I + ++ T N +
Sbjct: 197 ALELWKRQDCCGKFVASGGQGDDEVVTEAQAMRGYLMEHGVSQETILMEDRSRTTWENLK 256
Query: 109 EASAWAEK----NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ ++ +VT D+H+ R + + SH +
Sbjct: 257 YSQMLMNADAQYQDYTA-AMVTSDFHVFRC----AEYAHNLGLKADGVGSH---TGGWYW 308
Query: 165 KIKILR 170
+R
Sbjct: 309 PTAFIR 314
>gi|91793951|ref|YP_563602.1| hypothetical protein Sden_2600 [Shewanella denitrificans OS217]
gi|91715953|gb|ABE55879.1| protein of unknown function DUF218 [Shewanella denitrificans OS217]
Length = 264
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 64 KIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ +SG + S ++ +++ I +A +T + F
Sbjct: 137 RLVVSGWNGGREGASHAEVMALAAQELGVSKAQITTFPEARDTIEELMSMKQIMGEAPFR 196
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL-----LIE 175
+VT HM R RI ++ P S+ L + +++ ++ L E
Sbjct: 197 ---LVTSATHMSRAM----RIARSLGLNPEAAPSNFLAGDGYWWRLSADNLILSQASLHE 249
Query: 176 YLKILLLSIQLS 187
Y+ +L L ++
Sbjct: 250 YVGMLWLDVKRG 261
>gi|290893441|ref|ZP_06556425.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556942|gb|EFD90472.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 344
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 11 CLIFFIMGFISFIRYVK----------QMHIPDHPSVSAIVV---LTGE-------PIRI 50
++ F+M F+ + ++ Q + P + IV+ L G R+
Sbjct: 128 VVVLFVMAFVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRL 187
Query: 51 ERAFELLENQI---GEK--IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
RA E Q G++ +SG + +VS+ ++ I + + E I + +++N
Sbjct: 188 NRAIAFYEKQYSKTGKRATFIVSGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVN 247
Query: 103 TEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
T N Q + A + +++ + T+++H+ R L ++
Sbjct: 248 TLQNMQFSKAKMDAIMPDYNSLFS-TNNFHLFRAGLYARKAG 288
>gi|49478260|ref|YP_037591.1| hypothetical protein BT9727_3269 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329816|gb|AAT60462.1| hypothetical protein BT9727_3269 [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 251
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
I V G P + E +G +I ++G H S + L + I
Sbjct: 57 PQKCDVIFVFGGSHPSNWQAPLEAYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 116
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V + R + L++
Sbjct: 117 VNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKINRLLFVCKNLGAGRQYRVLKK 176
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 177 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 233
>gi|320093548|ref|ZP_08025440.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319979504|gb|EFW10974.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 338
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 49/151 (32%), Gaps = 22/151 (14%)
Query: 6 YGLFVCLIFFIM-GFISFIRYVKQMH----IPDHPSVSAIVV----LTGE------PIRI 50
G + L + F+SF + +P I++ L GE RI
Sbjct: 120 LGAAMLLTAWGAWFFMSFTALLLYSTFYRLLPRKRVYDYIIIHGAGLNGEEPTPLLRGRI 179
Query: 51 ERAFELL-ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
E A L + SG VS+ + + + E I ++ T N
Sbjct: 180 ETAIRLWDRQGRRAVLVPSGGQGPDEVVSEAEAMHRFLRTNGVGEESILDEDRSTTTMEN 239
Query: 107 AQEASAWAEKNNFH---HVLIVTHDYHMPRT 134
A E+ +VT DYH+ RT
Sbjct: 240 LVFAKQLIEERQRGFPYRCAMVTSDYHVFRT 270
>gi|187250824|ref|YP_001875306.1| chromosome segregation ATPase [Elusimicrobium minutum Pei191]
gi|186970984|gb|ACC97969.1| Chromosome segregation ATPase [Elusimicrobium minutum Pei191]
Length = 1148
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIF----ISGVHHSVSKDILLQKIPIRQDLAECCIDIG 97
VLT +E E+ G+K+ +SG +++ LL C +D
Sbjct: 1017 VLTDPENLLETGIEIYAQPPGKKLLNLSAMSGGEKTLTALSLLFAFFTHNPAPFCVLDEA 1076
Query: 98 YKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
AL+ E N + ++ + ++VTH+
Sbjct: 1077 DAALD-EANVERYVNLIKEFSNTTQFIVVTHN 1107
>gi|238757630|ref|ZP_04618814.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
gi|238704135|gb|EEP96668.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
Length = 266
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 49/198 (24%), Gaps = 31/198 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------- 48
W L + + + + + V IVVL G
Sbjct: 55 ALSWLTLLLISLQPVADRLLLPLEKHYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFA 114
Query: 49 ----RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ L K+ +G +S S + + I + +
Sbjct: 115 NSLPRVTEGIRLYRAHPNAKMVFTGSAGPNSQSSAKTAALVAESLGVPAADIIALEQPKD 174
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----E 158
T A + F L+VT H+ R P P ++ L
Sbjct: 175 TVEEAAAVATLVGDKPF---LLVTSASHLHRAIKFFTAKG----LHPIPAPANQLAITTP 227
Query: 159 ENSSIFK-IKILRVLLIE 175
++ ++ E
Sbjct: 228 LHNWERTIPAATWLVHTE 245
>gi|262191555|ref|ZP_06049737.1| hypothetical protein VIH_001923 [Vibrio cholerae CT 5369-93]
gi|262032563|gb|EEY51119.1| hypothetical protein VIH_001923 [Vibrio cholerae CT 5369-93]
Length = 317
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 55/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQK--------IPIRQDLAECCI 94
R++ A + EN +F G+ + + + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRCQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|330445903|ref|ZP_08309555.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490094|dbj|GAA04052.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 250
Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI A +L + + +SG H S ++ +++ ++ + + I + Y T +
Sbjct: 69 RITAALDLYKQGKIDYFLLSGDNAHRSYNEPWTMKRDLLKAGVPDDKIALDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + +NF I+T +H R
Sbjct: 129 VVRAKEVFDADNFT---IITQQFHCERALF 155
>gi|213027677|ref|ZP_03342124.1| hypothetical protein Salmonelentericaenterica_37123 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 175
Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 35/118 (29%), Gaps = 25/118 (21%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG----VHHSVSKDI 78
IVVL G R+ L G ++ +G + + ++
Sbjct: 61 IVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEV 120
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ I + K +TE A F L+VT H+PR +
Sbjct: 121 GARVAQSLGVPRSDIITLD-KPKDTEEEAAAVKQAIGDAPF---LLVTSASHLPRAMI 174
>gi|307254226|ref|ZP_07536069.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862816|gb|EFM94767.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 193
Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ + + +SG + V + L + I +++ E GY+ L
Sbjct: 54 RLEAAVQLINKGKVKTLLVSGDNKTPYYNEPKVMLNDLYKM-GIPKNIIEQDF-AGYRTL 111
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 112 DSIVRASKV------YKLEPFIIVSQQFHCERALF 140
>gi|292670946|ref|ZP_06604372.1| MiaB family RNA modification enzyme [Selenomonas noxia ATCC 43541]
gi|292647567|gb|EFF65539.1| MiaB family RNA modification enzyme [Selenomonas noxia ATCC 43541]
Length = 442
Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 32/182 (17%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ-----DL 89
P +AI+ TG RI E E G ++ ISG ++ + +
Sbjct: 94 PEANAIIG-TGAWSRIMEVIE--ETLKGRRLLISGKDDTIYDAKTPRLRTTPNYTAYVKI 150
Query: 90 AECC-----------IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
AE C I +++ E EA A ++++ D
Sbjct: 151 AEGCDHRCAFCAIPLIRGSFRSRVMEDVVAEAEHLA-AQGVRELVLIAQD---------- 199
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
N + P++ L + I I +RVL Y K + +T+ ++
Sbjct: 200 -SANYGLDLYEKPMLPALLRALTKIKDIAWIRVLYS-YPKYFSDELIEVFATEPKVVKYV 257
Query: 199 TL 200
L
Sbjct: 258 DL 259
>gi|254285215|ref|ZP_04960181.1| hypothetical protein A33_A0882 [Vibrio cholerae AM-19226]
gi|150425218|gb|EDN16995.1| hypothetical protein A33_A0882 [Vibrio cholerae AM-19226]
Length = 312
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 55/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQK--------IPIRQDLAECCI 94
R++ A + EN +F G+ + + + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQHRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLIERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|116872406|ref|YP_849187.1| hypothetical protein lwe0988 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741284|emb|CAK20406.1| putative membrane protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 344
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
GL + + ++G+ SF+ Q + P + IV+ L G
Sbjct: 126 LGLAIVFVVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 185
Query: 49 RIERAFEL-----LENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + L+ +SG + ++S+ ++ I + + E I + K+
Sbjct: 186 RLNRAIKFHEKQYLKKGKRATFIVSGGQGANETISEAEAMRAYLIEKGIDENFIIMEDKS 245
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + + ++ + T+++H+ R
Sbjct: 246 VNTLQNMKFSKEKMDAIMPTYNSLF-ATNNFHLFRA 280
>gi|269104576|ref|ZP_06157272.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161216|gb|EEZ39713.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 363
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ ++ + Q I ++G ++ L+ I+Q + + A +T
Sbjct: 212 ERLNMTLKIAKEQPNSLIILTGGVPQNNQTEGRLMADWLIKQGINPNRLIEDNYARSTVE 271
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
NA +S ++ H I++ H+ R T E+
Sbjct: 272 NALYSSYALARHKIEHATIISSASHVRRGQTLFEIA 307
>gi|229523089|ref|ZP_04412501.1| hypothetical protein VIF_003661 [Vibrio cholerae TM 11079-80]
gi|229339939|gb|EEO04949.1| hypothetical protein VIF_003661 [Vibrio cholerae TM 11079-80]
Length = 317
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 53/171 (30%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTEARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRINSTVQF- 147
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 148 -------------------------IPYPIISHDLEENSSIFKIKILRVLL 173
+PYP + + ++ RV L
Sbjct: 143 RKLVDRCAQSGVLLDIARDFKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|229525956|ref|ZP_04415360.1| hypothetical protein VCA_000062 [Vibrio cholerae bv. albensis
VL426]
gi|229336114|gb|EEO01132.1| hypothetical protein VCA_000062 [Vibrio cholerae bv. albensis
VL426]
Length = 312
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A + EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALQCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQQLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLVDRCAQSGVRLEIARDLKVHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|227524764|ref|ZP_03954813.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227088071|gb|EEI23383.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 351
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 26/151 (17%)
Query: 8 LFVCLIFFIMGFIS---FIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA 53
IF+I+ + V ++ P + I+VL RI +
Sbjct: 137 FLTLFIFYILLTVWNTMVSMIVYNLYFPKYDK-DYIIVLGSGLIDGYKVGRLLGNRINKG 195
Query: 54 FELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
E Q+ + K+ SG + + + ++K + Q + E + K++NT
Sbjct: 196 IEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKSINTRQ 255
Query: 106 NAQEASAWAEK---NNFHHVLIVTHDYHMPR 133
N + + + ++ VT+++H R
Sbjct: 256 NLIFSDRIIKNDSGRDDSKIVFVTNNFHTLR 286
>gi|227513619|ref|ZP_03943668.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227083135|gb|EEI18447.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 351
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 26/151 (17%)
Query: 8 LFVCLIFFIMGFIS---FIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA 53
IF+I+ + V ++ P + I+VL RI +
Sbjct: 137 FLTLFIFYILLTVWNTMVSMIVYNLYFPKYDK-DYIIVLGSGLIDGYKVGRLLGNRINKG 195
Query: 54 FELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
E Q+ + K+ SG + + + ++K + Q + E + K++NT
Sbjct: 196 IEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKSINTRQ 255
Query: 106 NAQEASAWAEK---NNFHHVLIVTHDYHMPR 133
N + + + ++ VT+++H R
Sbjct: 256 NLIFSDRIIKNDSGRDDSKIVFVTNNFHTLR 286
>gi|302529517|ref|ZP_07281859.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438412|gb|EFL10228.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 221
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 55 ELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEGNA 107
EL + +I +G + + D ++ + + + I + A NT N
Sbjct: 51 ELYQQGCFRQIVFTGANAPTTVDRFPRGEAVHYREHALELGVPDDAILVEPTARNTGDNI 110
Query: 108 QEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ E V +++ Y R + +++ V+
Sbjct: 111 ARSRELLEARGTKVDSVTLISRPYQQRRAYATCRKLWPEVKV 152
>gi|313624306|gb|EFR94349.1| integral membrane protein [Listeria innocua FSL J1-023]
Length = 344
Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 3 YFWYGLFV--------CLIFFIMGFISFIRYVK----------QMHIPDHPSVSAIVV-- 42
FW+G + ++ F+M F+ + ++ Q + P + IV+
Sbjct: 112 IFWFGSILKNGSPILGMVVVFLMAFVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGS 171
Query: 43 -LTGE-------PIRIERAFELLENQI---GEK--IFISG---VHHSVSKDILLQKIPIR 86
L G R+ RA E Q G++ +SG + +VS+ ++ I
Sbjct: 172 GLIGGDRVPPLLASRLNRAIAFYEKQYDKKGKRATFIVSGGQGANETVSEAKAMRDYLIS 231
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + E I + K++NT N Q + A + ++ + T+++H+ R L ++
Sbjct: 232 KGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTYNSLFS-TNNFHLFRAGLYARKAG 288
>gi|307245277|ref|ZP_07527367.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307258689|ref|ZP_07540423.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853818|gb|EFM86033.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306867242|gb|EFM99096.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 229
Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 15/95 (15%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E A +L+ + + +SG + V + L + I +++ E GY+ L
Sbjct: 90 RLEAAVQLINKGKVKTLLVSGDNKTPYYNEPKVMLNDLYKM-GIPKNIIEQDF-AGYRTL 147
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++ A + +IV+ +H R
Sbjct: 148 DSIVRASKV------YKLEPFIIVSQQFHCERALF 176
>gi|254453829|ref|ZP_05067266.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268235|gb|EDY92505.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 158
Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 14/144 (9%)
Query: 49 RIERAFELLENQIGEKI-FISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R A L ++ + GV H ++ + + + + + T
Sbjct: 23 RTLHAAALYQSGHITSLVLCGGVGQHPPSEAAVMQDILLGAGVPMDAMVLEDH-STTTGE 81
Query: 106 NAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N + A + + V+I+T YH PR L +R S L
Sbjct: 82 NIRFARDLIHETDVAIIEVVIITDWYHAPRAKLIARRAGLHAT-----SSSPSLRGAKFW 136
Query: 164 FKIKILRVLLIEYLKILLLSIQLS 187
+ K L E + +I+L
Sbjct: 137 PQTKSA---LREIPAYIAYAIRLR 157
>gi|332711560|ref|ZP_08431491.1| hypothetical protein LYNGBM3L_64260 [Lyngbya majuscula 3L]
gi|332349538|gb|EGJ29147.1| hypothetical protein LYNGBM3L_64260 [Lyngbya majuscula 3L]
Length = 185
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 34/181 (18%)
Query: 29 MHIPDHPSVSAIVV--------LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILL 80
+ I + A+VV L G A E +K+ +G + K L
Sbjct: 9 LSIKSPINADALVVEGWLPDYALKG-------AIEEFYRGNYQKLITTG--PPLRKGYYL 59
Query: 81 QKIPIRQDL-AECCIDIGYK--------ALN-----TEGNAQEASAWA--EKNNFHHVLI 124
+ +L A CI +G + A + T +AQ W + + +
Sbjct: 60 SEYKTYAELTAATCIALGVEPDKLVAVPAPDVNVNRTLASAQALREWLLTSDKSIKSINL 119
Query: 125 VTHDYHMPRTFLELQRIN-STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ D H R+++ +++ V+ S D E + +R ++ E + L
Sbjct: 120 YSFDVHTRRSWMLFKQVLAPEVKVGAIAANSLDYEAKQWWVSSQGVRSIMSETIAYLYAQ 179
Query: 184 I 184
+
Sbjct: 180 V 180
>gi|153824499|ref|ZP_01977166.1| hypothetical protein A5A_1366 [Vibrio cholerae MZO-2]
gi|149742053|gb|EDM56082.1| hypothetical protein A5A_1366 [Vibrio cholerae MZO-2]
Length = 317
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 41/116 (35%), Gaps = 18/116 (15%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ A EN +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISALRCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHH------VLIVTHDYHMPRTFLELQRINST 144
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLVLTLVSNDYHLKR-IFEIQQLMDE 138
>gi|27366184|ref|NP_761712.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
gi|27362384|gb|AAO11239.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
Length = 212
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 10/118 (8%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVHH-------SVSKDILLQKIP 84
V ++V+ +R+ E A L + I SG S+ ++
Sbjct: 19 RLTPVDCLLVMCSNDLRVAEHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELA 78
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQR 140
+ E I + K+ N+ N + + F ++V + R ++
Sbjct: 79 KASGVPEEAILLETKSSNSGENVRFSEQLLIDKGLVFESFILVQKPFMERRALATFEK 136
>gi|317047567|ref|YP_004115215.1| hypothetical protein Pat9b_1338 [Pantoea sp. At-9b]
gi|316949184|gb|ADU68659.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 261
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 23/156 (14%)
Query: 33 DHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVS 75
+ SV IVVL G R+ K+ +G +
Sbjct: 75 RNVSVDYIVVLGGGYTFNPDWAPSSNLIGNSLPRVAEGVRQWRRYPQAKMIFTGAAAGNN 134
Query: 76 K---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+ ++ + E I + + +T AQ ++ F L+VT H+P
Sbjct: 135 PMSNARVAAQVAESLGVPESVIIVLDQPKDTREEAQAVKIAVGQHPF---LLVTSANHLP 191
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
R Q P ++ N +
Sbjct: 192 RAMQFFQGAGLNPLPAPANQMAITSPLNGWERALPS 227
>gi|302520649|ref|ZP_07272991.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429544|gb|EFL01360.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 220
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 9/105 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQDLAECCIDIGYKALNT 103
+ A L + +G + ++ ++ + + I + +A NT
Sbjct: 41 DVAARLYLAGTVPLLVFTGATSATTRERMPRGEAEHYRQRAVALGVPPRVILVEPEARNT 100
Query: 104 EGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N + + A E+ L+V Y R + Q++ VQ
Sbjct: 101 GENIRLSRALLEREGVDVRSALLVCKPYEERRAYATAQKLWPEVQ 145
>gi|255994503|ref|ZP_05427638.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
gi|255993216|gb|EEU03305.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
Length = 243
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L +N+I +KI ++G + + D ++ I++ + + I ++T
Sbjct: 102 KDRLNIAASLYKNKIVKKILLTGDGRNKNHDETQVMYDYIIKKRIPPEALQIDPYGISTY 161
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A++ +I+T YH+ R+
Sbjct: 162 ESMARAASI---YKIKRPVIITQRYHLYRSLY 190
>gi|315281729|ref|ZP_07870291.1| integral membrane protein [Listeria marthii FSL S4-120]
gi|313614619|gb|EFR88201.1| integral membrane protein [Listeria marthii FSL S4-120]
Length = 356
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 28/156 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVK-------QMHIPDHPSVSAIVV---LTGE-------PI 48
G+ V I ++G+ SF+ Q + P + IV+ L G
Sbjct: 138 LGIAVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLAS 197
Query: 49 RIERAFELLENQIGEK-----IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ RA + + Q +K +SG + ++S+ ++ + Q + E I + K+
Sbjct: 198 RLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLLNQGIDENFIIMEDKS 257
Query: 101 LNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRT 134
+NT N + + A + +++ + T+++H+ R
Sbjct: 258 VNTLQNMKFSKAKMDAIMPSYNSLFS-TNNFHLFRA 292
>gi|254469488|ref|ZP_05082893.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211961323|gb|EEA96518.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 205
Score = 39.5 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 18/153 (11%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDL 89
H S A R++ A +L +++ E++ +SG ++ + + + + Q +
Sbjct: 41 HKSADA---------RVQVAAQLWRDRLVERVLVSGGEYAEIGQCEAHDMCKAL-VAQGV 90
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLELQRINSTV 145
+ I + +A NT N + ++ V+ V R + L+R V
Sbjct: 91 PKSHIILETRAANTGENVVFSMELLKELGIYKAVQSVIAVGSVSASRRYLMTLERYWPEV 150
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ P + + + +L E+ K
Sbjct: 151 IKMLAPANKYPVSVADWPLHPEFACEVLDEWGK 183
>gi|258622260|ref|ZP_05717286.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624327|ref|ZP_05719276.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262173068|ref|ZP_06040745.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
gi|258583478|gb|EEW08278.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258585584|gb|EEW10307.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261890426|gb|EEY36413.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
Length = 363
Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E + + I ++G K L+ I + ++ I A +T N
Sbjct: 213 RLETTLAMAKANPEAMIILTGGVPQNHKTEGKLMADWLIERGVSATRIIEENYATSTVDN 272
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPR--TFLEL---QRINSTVQF--IPYP 151
A +S ++ H I++ H+ R T E+ Q + F + YP
Sbjct: 273 ALFSSYALARHGIKHATIISSASHVRRGQTLFEVASWQTGPKGITFDTVSYP 324
>gi|251797475|ref|YP_003012206.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2]
gi|247545101|gb|ACT02120.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2]
Length = 1195
Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLA 90
++V +P R+ + +++ G+K+ +SG +++ LL I + +
Sbjct: 1063 RADLVLV---DPERVLDTGIDIVAQPPGKKLQNLQLLSGGERALTAIALLFAILQVKPVP 1119
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
C +D AL+ A+ A E + ++VTH
Sbjct: 1120 FCVLDEVEAALDEANVARFAQYLREFSGLTQFIVVTHR 1157
>gi|116334676|ref|YP_796203.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
gi|116100023|gb|ABJ65172.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
Length = 357
Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 32/157 (20%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVK-----QMHIPDHPSVSAIVVLTGE-----------P 47
+ L + + F F Y+ Q + P + ++VL
Sbjct: 143 LFPSLVITYVLF-----WFYNYLTMLVLYQFNRPRYNQ-DFLIVLGAGLLNGNEVSPLLG 196
Query: 48 IRIERAF-----ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
RI+RA +L + + SG +V + ++ I L + +
Sbjct: 197 RRIDRALTFYRKQLAKTGQAPMVIFSGGQGGDETVPEGRAMRDYAIAHGLPAEQALVEDQ 256
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLI--VTHDYHMPRT 134
+ T N + + VT+ YH R
Sbjct: 257 SKTTYENMVFSKQLIAATGQQRPRVTFVTNGYHTFRA 293
>gi|256831370|ref|YP_003160097.1| hypothetical protein Jden_0119 [Jonesia denitrificans DSM 20603]
gi|256684901|gb|ACV07794.1| protein of unknown function DUF218 [Jonesia denitrificans DSM
20603]
Length = 348
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 63/188 (33%), Gaps = 41/188 (21%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQ----MHIPDHPSVSAIVVL----TGE------PI 48
W L++ +I +GF +F Y+ +P+ S IVVL G+
Sbjct: 117 RIWASLWLVMIIGYLGF-AFTCYLAYTFLYAAVPERFISSYIVVLGSELDGDQVTPVLAS 175
Query: 49 RIERAFELLENQIG----EKIFISGVHHS---------------------VSKDILLQKI 83
R+ A L N I +SG V++ ++
Sbjct: 176 RLNYAITLYANYSAFHGETAIVVSGGTPEPPTDAPAQSPESAPVAPGPASVAEAHAMRDY 235
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ I + AL TE N ++ + + + +VT +YH+ RT +++
Sbjct: 236 LTNHGIPARDIVVEDTALTTEDNLIQSRLLIPEPD-APLAVVTSNYHVYRTTTLARQLGV 294
Query: 144 TVQFIPYP 151
P
Sbjct: 295 RAHVYGAP 302
>gi|227510603|ref|ZP_03940652.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190255|gb|EEI70322.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 351
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 26/151 (17%)
Query: 8 LFVCLIFFIMGFIS---FIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERA 53
IF+I+ + V ++ P + I+VL RI +
Sbjct: 137 FLTLFIFYILLTVWNTMVSMIVYNLYFPKYDK-DYIIVLGSGLIDGYKVGRLLGNRINKG 195
Query: 54 FELLE---NQIGE--KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
E + + K+ SG + + + ++K + Q + E + K++NT
Sbjct: 196 IEFYHLQLKKTAKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDTLVEDKSINTRQ 255
Query: 106 NAQEASAWAEK---NNFHHVLIVTHDYHMPR 133
N + + + + ++ VT+++H R
Sbjct: 256 NLIFSDRIIKNDSGRDDNKIVFVTNNFHTLR 286
>gi|183219644|ref|YP_001837640.1| putative vancomycin sensitivity protein SanA [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909782|ref|YP_001961337.1| SanA-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774458|gb|ABZ92759.1| SanA-related protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778066|gb|ABZ96364.1| Putative vancomycin sensitivity protein SanA; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 59/166 (35%), Gaps = 41/166 (24%)
Query: 2 RYFWYGLFV--CLIFFIMGFISFI----------RYVKQMHIPDHPSVSAIVVLTGEP-- 47
R W LF+ L+F I+GF+S + + + P +V G
Sbjct: 17 RVKWKSLFLGFILVFGILGFVSLASNLGFWIVYQNSIHTNNPSEIPEAEVAIVP-GAAVY 75
Query: 48 ---------IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP-------IRQDLAE 91
R+ +L + +KI +SG + + L + +D+
Sbjct: 76 GKIPSPILMDRLVCGLDLYKQGKVKKILLSGDNGKSDYNELRPMLEYMLSHEVRPEDIF- 134
Query: 92 CCID-IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+D G++ L+T A+E + K + V+ + +PR
Sbjct: 135 --VDHAGFRTLDTLIRAKEV--FLVKKA----IFVSQSFFLPRAIY 172
>gi|258626686|ref|ZP_05721511.1| hypothetical protein VMB_28120 [Vibrio mimicus VM603]
gi|258581037|gb|EEW05961.1| hypothetical protein VMB_28120 [Vibrio mimicus VM603]
Length = 287
Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 49/171 (28%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQD--------LAECCI 94
R++ A + EN +F G+ + + Q L +
Sbjct: 24 GKSRVDGLLSALQCHENSSALIVFCGGITAGQTVSEAQRMHEYFQQQVHQKGLVLQHVDV 83
Query: 95 DIGYKALNTEGNAQEASA-WAEKNNFH-----HVLIVTHDYHMPRTFLELQRINSTVQF- 147
+ ++ +T N + + H + +V+ DYH+ R LE+Q +
Sbjct: 84 LLEQQSTSTVENIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR-ILEIQDLMDEQGLL 142
Query: 148 -------------------------IPYPIISHDLEENSSIFKIKILRVLL 173
+PYP + ++ RV L
Sbjct: 143 RTLDERCLQAGVKLDISRDLNAHVCVPYPYSCERGRRFLWVDELTTYRVFL 193
>gi|262275794|ref|ZP_06053603.1| putative SanA protein [Grimontia hollisae CIP 101886]
gi|262219602|gb|EEY70918.1| putative SanA protein [Grimontia hollisae CIP 101886]
Length = 219
Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A +L N+ + + +SG H S ++ +++ ++ + + I + Y T
Sbjct: 68 HRIDAAQDLYLNKKVDVLLLSGDNAHRSYNEPWTMKRDMLKAGIPDEKIFLDYAGFRTLD 127
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + + F +VT +H R
Sbjct: 128 SIIRAKKVFDADEFT---LVTQAFHCERALF 155
>gi|115315002|ref|YP_763725.1| hypothetical protein FTH_1231 [Francisella tularensis subsp.
holarctica OSU18]
gi|167010037|ref|ZP_02274968.1| hypothetical protein Ftulh_04754 [Francisella tularensis subsp.
holarctica FSC200]
gi|115129901|gb|ABI83088.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 158
Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 9/147 (6%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI + E+ + ++I ISG +S+ + + + + + I + + NT
Sbjct: 17 YDRILKTAEVYHQHL-QQIIISGGAPFGEKLSEAEIYADVLDKLGIPKSKIILEKNSKNT 75
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
NA+ N+ + +VT H R + + I +++ +
Sbjct: 76 YQNAEFIKKILM-NDKNTYCLVTGGIHYKRAKIIFDKFTINTISIASSKFVPNIKILPNA 134
Query: 164 FKIKILRVLLIEYLKILLLSIQLSLST 190
+ I + ++ EYL I I++ LS+
Sbjct: 135 YNFYITQNIVHEYLGI----IRIYLSS 157
>gi|312196065|ref|YP_004016126.1| hypothetical protein FraEuI1c_2217 [Frankia sp. EuI1c]
gi|311227401|gb|ADP80256.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 267
Score = 39.1 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 21/132 (15%)
Query: 35 PSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
P A+VVL G R++ A EL + + G ++ +
Sbjct: 97 PRSDALVVL-GASQYNGRPSEVFQARLDHAAELYRAGVAPLVITVGGKIPGDHYTEAGVG 155
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH------MPRT 134
+Q + + + +T + + +IVT +H M R
Sbjct: 156 ATYLEKQGVPTSAVLAVPEGRDTLESLIGVAGEMNTRGLRRAVIVTDRWHSLRSVAMARD 215
Query: 135 FLELQRINSTVQ 146
+ TV
Sbjct: 216 LGLTAHSSPTVT 227
>gi|153838447|ref|ZP_01991114.1| transporter [Vibrio parahaemolyticus AQ3810]
gi|149748167|gb|EDM59026.1| transporter [Vibrio parahaemolyticus AQ3810]
Length = 365
Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 24/119 (20%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ + AI++LTG + +H + L+
Sbjct: 213 VERLETTLAMAKANPDAIIILTGGVPK---------------------NHKT-EGKLMAD 250
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQ 139
I + +++ I A +T GNA +S ++ H I++ H+ R T E+
Sbjct: 251 WLIGKGVSKDRIIEENYATSTVGNALFSSYALARHYIKHATIISSASHVRRGQTLFEIA 309
>gi|167464933|ref|ZP_02330022.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382670|ref|ZP_08056534.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153368|gb|EFX45791.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 365
Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 59/155 (38%), Gaps = 24/155 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PIR 49
+ + G+ L++ M +F + Q + P + ++V R
Sbjct: 145 KILFTGVSAILLYMFMDIANFLTASILYQFNKPKYNQ-DFVIVHGSGLIHDKVPPLLASR 203
Query: 50 IERAFELL--ENQIG--EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
I++A E ++++ K+ SG +VS+ +Q I + + ++ +
Sbjct: 204 IDKAIEFYWMQSKVASPPKLIFSGGKGSDENVSEAEAMQIYAIEKGIPIEDTIQENQSRS 263
Query: 103 TEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRT 134
T N + E ++ + V++++H+ R
Sbjct: 264 TYENLLYSKRIMESINGEKYNSIF-VSNNFHIFRA 297
>gi|291616915|ref|YP_003519657.1| YcbC [Pantoea ananatis LMG 20103]
gi|291151945|gb|ADD76529.1| YcbC [Pantoea ananatis LMG 20103]
Length = 308
Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 28/152 (18%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFE-LLENQIGEKIFISGVHHSVSKD 77
V IVVL G R+ L N +F +G +
Sbjct: 112 KVDYIVVLGGGYTYNPAWAPSSNLLNNSLPRVTEGVRQWLRNPQATMVF-TGAAAGHNPK 170
Query: 78 I---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++ + + I I + +TE QEA A + H L+VT HMPR
Sbjct: 171 SNAWVAAQVAESLGVPDAHIHILDQPKDTE---QEARAVSAVIGHHSFLLVTSANHMPRA 227
Query: 135 FLELQRINSTVQFIPYPIISHDLEEN-SSIFK 165
Q+ + I P + + +
Sbjct: 228 MRFFQQA--GLNPIAAPANQLAITSPLNWWER 257
>gi|111018227|ref|YP_701199.1| hypothetical protein RHA1_ro01217 [Rhodococcus jostii RHA1]
gi|110817757|gb|ABG93041.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 230
Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHSV 74
I D + AIVVL G R+E+A++L E + ++ G
Sbjct: 55 ARIDDTSAADAIVVL-GAAQYSGTPSSVFEARLEQAYKLYERGVAPEVITVGGKQEGDEY 113
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ + I + + I + +T + + S ++V+ +H RT
Sbjct: 114 TEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMAAQGIDSAVLVSDPWHSLRT 173
>gi|308186266|ref|YP_003930397.1| hypothetical protein Pvag_0746 [Pantoea vagans C9-1]
gi|308056776|gb|ADO08948.1| Uncharacterized protein ycbC [Pantoea vagans C9-1]
Length = 261
Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 23/127 (18%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISGVHHSVSKDI 78
V IVVL G R+ + + +G +
Sbjct: 78 KVDYIVVLGGGYTFNPVWAPSSNLLNNSLPRVAEGIRQWQRNPQSTLIFTGAAGGTNPKS 137
Query: 79 ---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ ++ + I I + +T AQ +L+VT HMPR
Sbjct: 138 SAWVAAQVAESLGVPREHIQILDQPRDTADEAQAVKTVV---GDRPMLLVTSANHMPRAI 194
Query: 136 LELQRIN 142
+
Sbjct: 195 RFFHAVG 201
>gi|170766004|ref|ZP_02900815.1| putative SanA protein [Escherichia albertii TW07627]
gi|170125150|gb|EDS94081.1| putative SanA protein [Escherichia albertii TW07627]
Length = 230
Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 20/144 (13%)
Query: 9 FVCLIFFIMGFISFIRY---VKQMHIPDHPSVSAI----VVLTGEPI--------RIERA 53
C + G + FI VK V A+ V L R+ A
Sbjct: 21 IACFLLLAAGAMIFIADRTMVKASQQLTWSDVDAVPARNVGLLLGAKPGNNYFTRRVNSA 80
Query: 54 FELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L + + +SG + S + D +Q+ I + + I Y +T + A+
Sbjct: 81 AALYHAGKVKWLLVSGDNGSKNYDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRAN 140
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
+N+ I++ ++H R
Sbjct: 141 KVFGENHIT---IISQEFHNQRAI 161
>gi|299534489|ref|ZP_07047822.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
gi|298730117|gb|EFI70659.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
Length = 338
Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 27/169 (15%)
Query: 3 YFWYGLFVCLIFFIMGFISF------IRYVKQMHIPDHPSVSAIVVLTGE---------- 46
FW+ LF F I G+ F + + P + I+ L
Sbjct: 123 VFWHILFF-YAFLIFGYTMFLYTSVLAYSILYLLTPIRYEPNYIIALGSGLIGDTVPPLL 181
Query: 47 PIRIERAFELLENQIGE-KIFISGV---HHSVSKDILLQKIPIR-QDLAECCIDIGYKAL 101
R++ A + + I +SG VS+ +++ I + I + ++
Sbjct: 182 ASRLDEAVKQYIKYEMKPYIIVSGGQGNDEKVSEAYAMKQYLIEVHHIPTDKIVMEDRSA 241
Query: 102 NTEGNAQEASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
NTE N + + + N+ + VT+++H+ R + ++ +
Sbjct: 242 NTEQNMIFSKQIMDHHSHGENYRSIF-VTNNFHVFRASIYARKAALDAE 289
>gi|290473867|ref|YP_003466741.1| hypothetical protein XBJ1_0806 [Xenorhabdus bovienii SS-2004]
gi|289173174|emb|CBJ79947.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 268
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 24/121 (19%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
IVVL G R+ L G K+ +G V+ S+S +
Sbjct: 87 IVVLGGGFTYNPQWAPSANLISNSLPRVTEGIRLYHLNPGTKMIFTGGKGVN-SISSAEI 145
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + + L+TE A E + F ++VT HM R+ +
Sbjct: 146 AAMVAQSLGIPVEDTIALREPLDTEEEAAEVEKVLGQQPF---ILVTSANHMERSLKFFE 202
Query: 140 R 140
R
Sbjct: 203 R 203
>gi|229829927|ref|ZP_04455996.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
gi|229791225|gb|EEP27339.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
Length = 342
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
F+ + F F F+ Y + + IP I++ L GE RI
Sbjct: 130 IFFIFFVYSYLIFGFAFAGFMLYSILYLLIPKRKHYDFIIIHGAGLLDGERVTPLLKRRI 189
Query: 51 ERAFELLENQIGE--KIFISGV---HHSVSKDI-LLQKIPIRQDLAECCIDIGYKALNTE 104
++A E + K+ SG +S+ +L + D+ + + + ++ T
Sbjct: 190 DKAVEAYKKSNNPNMKLIASGGQGPDEKISEAQAILNYLLEETDIPKEAVLLEDQSKTTY 249
Query: 105 GNAQEASAWAEKN-NFHHVLIVTHDYHMPRT 134
N + EK + L VT+DYH+ RT
Sbjct: 250 ENLLFSKRIGEKLVDQPRFLFVTNDYHVFRT 280
>gi|199597870|ref|ZP_03211296.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|258509552|ref|YP_003172303.1| hypothetical protein LGG_02557 [Lactobacillus rhamnosus GG]
gi|199591306|gb|EDY99386.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|257149479|emb|CAR88452.1| Conserved domain protein [Lactobacillus rhamnosus GG]
gi|259650819|dbj|BAI42981.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
Length = 352
Score = 38.7 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 23/152 (15%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG---E-------PIRIERAF 54
++GL + + + + H IV+ G RI+ A
Sbjct: 138 FFGLGGLYVLLTLYNFLTALILYNLRPQPHNRTFLIVLGAGLLHGDQVSPLLASRIDTAI 197
Query: 55 EL----LENQI-GEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ L+ KI SG ++S+ + +Q+ + + + E + ++ T N
Sbjct: 198 KFYHKQLKKGRPAPKIIFSGGKGADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLEN 257
Query: 107 AQEASAWA----EKNNFHHVLIVTHDYHMPRT 134
+ + + + T++YH+ R
Sbjct: 258 MRFSKRLIIQEIGEAPYKASFF-TNNYHLLRA 288
>gi|325066422|ref|ZP_08125095.1| hypothetical protein AoriK_01317 [Actinomyces oris K20]
Length = 117
Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQR 140
I + + I + ++ T N + VL+VT +H RT +
Sbjct: 1 YAIARGVPPERILLEDRSTTTRTNISYTRDLLAERGMADPQVLLVTSSFHAVRTAILASD 60
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITL 200
+ +P+ + + + + L EY+ +L + +L+ + F L
Sbjct: 61 MG-----VPWAVAPAR---TAWFYIVNAW---LREYVAVLTYRRRPALACAGIAGVFAVL 109
>gi|260584774|ref|ZP_05852519.1| membrane protein [Granulicatella elegans ATCC 700633]
gi|260157431|gb|EEW92502.1| membrane protein [Granulicatella elegans ATCC 700633]
Length = 342
Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVV-----LTGEP------IRI 50
+ + I F F+ F+ Y + +P I++ L GE RI
Sbjct: 130 ILFMFIIYSYIIFGFAFVGFMMYSFVYLWVPKKQHYDFIIIHGAGLLDGERVTPLLKKRI 189
Query: 51 ERAFELLENQIGEKI-FIS----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A + + I I+ G +S+ + + Q D+ + I + K+ T
Sbjct: 190 DKAVQAFQQSKNPHIQLIASGGQGSDEKISEAQAMYNYLVEQTDVPKEAILLEDKSTTTY 249
Query: 105 GNAQEASAWAEKN-NFHHVLIVTHDYHMPRT 134
N + E+ L VT+DYH+ RT
Sbjct: 250 ENLLFSKELGEQLVENPRFLFVTNDYHVFRT 280
>gi|319401654|gb|EFV89863.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 318
Score = 38.7 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 47 PIRIERAFELLENQIGEKIFI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+++A + +Q + I I SG +S+ + +++ I ++ E I + ++ N
Sbjct: 167 AARLDKALSVYHSQRTKPIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 103 TEGNAQEASAWAEKNNFHH--VLIVTHDYHMPRTFLELQRIN 142
T N + + +L VT +H+ R ++ +
Sbjct: 227 TRTNFLYSKSIIHSMMPASSQMLCVTSQFHVLRALKFAKKAH 268
>gi|270293195|ref|ZP_06199406.1| integral membrane protein [Streptococcus sp. M143]
gi|270279174|gb|EFA25020.1| integral membrane protein [Streptococcus sp. M143]
Length = 340
Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
F++ L + F F F+ Y + + IP I++ L GE RI
Sbjct: 128 IFFFFLIYSYLIFGFAFAGFLLYSILYLFIPKKKHYDFIIIHGAGLLNGEKVTPLLKNRI 187
Query: 51 ERAFELLENQIGE--KIFISGV---HHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A E K+ SG +S+ + + + D+ I + + T
Sbjct: 188 DKAVEAYRQSSNPNVKLIASGGRGGDEKISEAQAICNYLLEETDVPREAILLEESSTTTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + EK L VT+DYH+ RT
Sbjct: 248 ENLLFSKEMGEKLVASPRFLFVTNDYHVFRT 278
>gi|239941429|ref|ZP_04693366.1| hypothetical protein SrosN15_10566 [Streptomyces roseosporus NRRL
15998]
gi|239987894|ref|ZP_04708558.1| hypothetical protein SrosN1_11350 [Streptomyces roseosporus NRRL
11379]
gi|291444872|ref|ZP_06584262.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291347819|gb|EFE74723.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 215
Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNT 103
+ A + I +G +++ + ++ + + E + + KA NT
Sbjct: 41 DAAAGFYLRGLAPVIVFTGSTSPTTREHMPRGEAVHYRERAVELGVPESAVLVEPKARNT 100
Query: 104 EGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + + A E+ VL+V+ Y R + +++ V +
Sbjct: 101 GENIRFSRALLEEAGVDVSSVLLVSKPYEERRAYATARKLWPGVDVV 147
>gi|329113437|ref|ZP_08242218.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
gi|326697262|gb|EGE48922.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
Length = 171
Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 48 IRIERAFELLENQIGEKIFI-SGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A + G ++I +G ++ ++ ++ +A CI A +T
Sbjct: 25 NRVHSAL-MFGAAHGPVMYIPTGGVPQNGQTEADVMAACLLKAGIAPKCILPEPTAGDTF 83
Query: 105 GNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+A + + + + +V+ H+PR L ++ VQ +P+
Sbjct: 84 DSAVACTHLLRRAGYLTAQPIAVVSSPLHLPRCVLLMRLAGWKVQPVPF 132
>gi|326335887|ref|ZP_08202064.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691851|gb|EGD33813.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 223
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A L + + I ISG + + D +K I + I + Y T +
Sbjct: 81 RVEAAVALFKAGKIDFILISGDNSTKENDEPTDFKKALIALGIPADRIYLDYAGFRTLDS 140
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + I++ +H R
Sbjct: 141 VIRARE---VFGLTQMAIISQAFHNERAIY 167
>gi|312140170|ref|YP_004007506.1| hypothetical protein REQ_28070 [Rhodococcus equi 103S]
gi|311889509|emb|CBH48826.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 172
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 9/126 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ--KIPIRQDLAECCIDIGYKALNTE 104
R++ L+ + + +SG H S D + + + I L+T
Sbjct: 16 QGRLDTTARLVRDGKVAVVLVSGDAHGRSGDETAAMVEYLVEVGVPRTSIVADPYGLDTY 75
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
A+ + L VT +H+PRT + + + + S
Sbjct: 76 DTCVRAAE---TFGIRNALFVTQPFHLPRTVALARAAG----IEAHGVYAGRAGGRRSTL 128
Query: 165 KIKILR 170
+R
Sbjct: 129 VRNTVR 134
>gi|327393342|dbj|BAK10764.1| uncharacterized conserved protein YcbC [Pantoea ananatis AJ13355]
Length = 342
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 28/152 (18%)
Query: 36 SVSAIVVLTGEPI-----------------RIERAFE-LLENQIGEKIFISGVHHSVSKD 77
V IVVL G R+ L N +F +G +
Sbjct: 162 KVDYIVVLGGGYTYNPAWAPSSNLLNNSLPRVTEGVRQWLRNPQATMVF-TGAAAGHNPK 220
Query: 78 I---LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ ++ + + I I + +TE QEA A + H L+VT HMPR
Sbjct: 221 SNAWVAAQVAESLGVPDAHIHILDQPKDTE---QEARAVSAVIGHHSFLLVTSANHMPRA 277
Query: 135 FLELQRINSTVQFIPYPIISHDLEEN-SSIFK 165
Q+ + I P + + +
Sbjct: 278 MRFFQQA--GLNPIAAPANQLAITSPLNWWER 307
>gi|300784315|ref|YP_003764606.1| hypothetical protein AMED_2408 [Amycolatopsis mediterranei U32]
gi|299793829|gb|ADJ44204.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 223
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 55 ELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEGNA 107
EL I +G + + + ++I + + + I + +A +T N
Sbjct: 45 ELFHAGCFPLIVFTGANAPTTLERFPRGEAVHYREIALDLGVPDEAILVEPEARHTGENI 104
Query: 108 QEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+ V +V+ Y R + +R+ +
Sbjct: 105 AFTRRLLAERGIAVRTVTLVSRPYQQRRAYATAKRLWPEGDLV 147
>gi|258540756|ref|YP_003175255.1| hypothetical protein LC705_02565 [Lactobacillus rhamnosus Lc 705]
gi|257152432|emb|CAR91404.1| Conserved domain protein [Lactobacillus rhamnosus Lc 705]
Length = 352
Score = 38.7 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 23/152 (15%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG---E-------PIRIERAF 54
++GL + + + + H IV+ G RI+ A
Sbjct: 138 FFGLGGLYVLLTLYNFLTALILYNLRPQPHNRTFLIVLGAGLLHGDQVSPLLASRIDTAI 197
Query: 55 EL----LENQI-GEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ L+ KI SG ++S+ + +Q+ + + + E + ++ T N
Sbjct: 198 KFYHKQLKKGRPAPKIIFSGGKGADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLEN 257
Query: 107 AQEASAWA----EKNNFHHVLIVTHDYHMPRT 134
+ + + + T++YH+ R
Sbjct: 258 MRFSKRLIIQEIGEAPYKASFF-TNNYHLLRA 288
>gi|166031681|ref|ZP_02234510.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
gi|166028658|gb|EDR47415.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
Length = 263
Score = 38.7 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGEPI------------RIERA 53
G+ + + F+ + QMH+ ++ ++VL R+++A
Sbjct: 65 GIVIIFAGCLASFLIIEGLIISQMHVAGPDNLDYLIVL--GAQVYKNGPSPVLKFRLDKA 122
Query: 54 FELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+E L + ++G + ++ + +++ + I + K+ T N +
Sbjct: 123 YEYLSANPETRCIVTGGQGSNEPFTEASCMADYLVKRGIDSGRIILEDKSTTTAQNLTNS 182
Query: 111 SAWA---------EKNNFHHVLIVTHDYHMPRTF 135
+ N + V I+T+D+HM R
Sbjct: 183 MKLISADTINHALDSNTTNTVGILTNDFHMFRAM 216
>gi|317403935|gb|EFV84404.1| hypothetical protein HMPREF0005_03307 [Achromobacter xylosoxidans
C54]
Length = 98
Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ I + + + ++ A+ ASA+ + + ++T +H+PRT L L+
Sbjct: 1 MRDYLIARGVPADRVVADRLGNDSWATARHASAYMRERGYASATVITQYFHVPRTMLALR 60
Query: 140 R 140
R
Sbjct: 61 R 61
>gi|295425202|ref|ZP_06817905.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664]
gi|295064978|gb|EFG55883.1| cell division protein Smc [Lactobacillus amylolyticus DSM 11664]
Length = 1188
Score = 38.7 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
+V G R+ E E++ G+K+ +SG +++ LL +
Sbjct: 1051 IVFGGGNARLVLTEPDNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFSMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + +K + H +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFAQFLQKYDMHTQFIVITHR 1151
>gi|37525492|ref|NP_928836.1| hypothetical protein plu1545 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784920|emb|CAE13838.1| SanA protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 246
Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + S + +++ ++ + I + + T +
Sbjct: 69 RIQGAINAYNSDKIKYLLLSGDNAQQSYNEPVTMRRDLVKAGIPAANIVLDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
N+F I+T +H R ++ + Y + +
Sbjct: 129 IVRTRKVFNTNDFT---IITQRFHCERAL--FIAMHMGIDAQCYAVSTPK 173
>gi|307702098|ref|ZP_07639105.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307707431|ref|ZP_07643913.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616383|gb|EFN95574.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616585|gb|EFN95775.1| integral membrane protein [Streptococcus mitis NCTC 12261]
Length = 339
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------I 48
+ + + F F+ F+ Y + + IP I++ L GE
Sbjct: 125 LNILFAFIAYSYFIFGFAFVGFMLYSILYLFIPKKKHYDFIIIHGAGLLDGEKVTPLLKR 184
Query: 49 RIERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALN 102
RI++A E N I I G +S+ + + + D+ + I + ++
Sbjct: 185 RIDKAVEAYHNSKNPHIKIIASGGQGGDEKISEAQAITNYLLEETDVPQDGIILEDQSRT 244
Query: 103 TEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
T N + EK L VT+DYH+ RT
Sbjct: 245 TYENLLFSKELGEKLVAKPQFLFVTNDYHVFRT 277
>gi|331002899|ref|ZP_08326412.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413192|gb|EGG92566.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 268
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 46/177 (25%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVK----QMHIPDHPSVSAIVVLTG-------EPI-- 48
R + + +G + FI + D + ++VL
Sbjct: 52 RIPLWSVVSVYTLATLGVLIFIITSIVIALSLPKEDESGLDFLIVLGSKPDMENEGSQAK 111
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID-----IGYKALN 102
R+++A + ++ I ISG + K+ +++ + + L E +D + ++ N
Sbjct: 112 YRLDKAIDYIDKNPDTTIIISG---GLRKEEIIESLEMADYLIERGVDANNILVETESHN 168
Query: 103 TEGNAQEASAWAEKNNF------------------------HHVLIVTHDYHMPRTF 135
T N + A +K N + I+T+D+H+ R
Sbjct: 169 TRENLIYSKALIDKYNVDMKRNADITIVNDVRSVLEVEDRPQTIGILTNDFHIFRAM 225
>gi|326383401|ref|ZP_08205088.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197807|gb|EGD54994.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
Length = 223
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A + E++ +SG + ++ +++ Q + + +NT N
Sbjct: 74 RLDVAVAAFRSGHVERVIVSGNDADDAGNEVRVMRAYLEAQGIPASALVDDPLGVNT--N 131
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A A +IVT D+H+ R
Sbjct: 132 AT-CRRAATVYGVTSAVIVTQDFHVARAV 159
>gi|238020831|ref|ZP_04601257.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
gi|237867811|gb|EEP68817.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
Length = 212
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 18/150 (12%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A EL I SG + ++ ++ I Q + I Y + T
Sbjct: 67 HRIRAAAELYRAGKVRYIIASGDNRKHGYNEPEAMKAALIAQGVPAERIVPDYAGIRTLD 126
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + + ++ ++V+ +H R L R ++ + Y
Sbjct: 127 SVLRARSVFGQADY---IVVSQKFHNERAVY-LARA-HGIRAVGY-------NAPDVHLY 174
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQ 195
+ + EY +++ L T Q
Sbjct: 175 AGGFKTRVREY----GARMKMYLDLLTGKQ 200
>gi|226360352|ref|YP_002778130.1| hypothetical protein ROP_09380 [Rhodococcus opacus B4]
gi|226238837|dbj|BAH49185.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 230
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHSV 74
I D + AIVVL G R+E+A++L E + ++ G
Sbjct: 55 ARIDDTSTADAIVVL-GAAQYSGTPSSVFEARLEQAYKLYERGVAPEVITVGGKQEGDEY 113
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ + I + + I + +T + + S ++V+ +H RT
Sbjct: 114 TEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMGAQGIDSAVLVSDPWHSLRT 173
>gi|302869208|ref|YP_003837845.1| hypothetical protein Micau_4760 [Micromonospora aurantiaca ATCC
27029]
gi|302572067|gb|ADL48269.1| hypothetical protein Micau_4760 [Micromonospora aurantiaca ATCC
27029]
Length = 230
Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 10/127 (7%)
Query: 36 SVSAIVVLTGEPI--RIERAFELLENQIGEK-IFISGVH---HSVSKDILLQKIPIRQDL 89
V A+VV TG+ R+ A E + + ++ + L + +
Sbjct: 45 RVDALVVPTGQGEDWRLTDAIRAWETGPALRHLLVANTDSAERTYRPLTLDRLRGLGLRR 104
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF-- 147
+ T A + V +V YH+ R +L + R
Sbjct: 105 TGGVVLQAEPVTGTGRQATWIAEQVRALGVGSVALVVSPYHLVRVYLTVLRACDDAGLRI 164
Query: 148 --IPYPI 152
+P P+
Sbjct: 165 PMVPLPV 171
>gi|323494660|ref|ZP_08099763.1| hypothetical protein VIBR0546_02935 [Vibrio brasiliensis LMG 20546]
gi|323311093|gb|EGA64254.1| hypothetical protein VIBR0546_02935 [Vibrio brasiliensis LMG 20546]
Length = 277
Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 16/124 (12%)
Query: 41 VVLTGEPIRIERAFELLENQ-IGEK--IFISGVHHSVSKDILLQKIPIRQDLAECC---- 93
V+ R++ L+ ++ + + IF G+ ++ +
Sbjct: 18 VITAEGRSRVDALINLINDKDLAPEAVIFCGGITQGQTESEARAMYRYFNSRSAQISPFL 77
Query: 94 --IDIGYKALNTEGNAQEAS------AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ + K+ NT N + A+ K V+++++DYH+ R E+Q +
Sbjct: 78 PHVLLEDKSTNTIENIRNAAEKLIESELCRKEQRVKVVLISNDYHLKR-IFEIQTLMDEQ 136
Query: 146 QFIP 149
+
Sbjct: 137 GLLA 140
>gi|304404217|ref|ZP_07385879.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus
YK9]
gi|304347195|gb|EFM13027.1| chromosome segregation protein SMC [Paenibacillus curdlanolyticus
YK9]
Length = 1196
Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLA 90
I+ EP RI + +++ G+K+ +SG +++ LL I + +
Sbjct: 1061 RADLILA---EPDRILDTGIDIVAQPPGKKLQNLQLLSGGERALTAIALLFAILQVKPVP 1117
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
C +D AL+ A+ A E ++ ++VTH
Sbjct: 1118 FCVLDEVEAALDEANVARFAQYLREFSHLTQFIVVTHR 1155
>gi|320156696|ref|YP_004189075.1| hypothetical protein VVM_03432 [Vibrio vulnificus MO6-24/O]
gi|319932008|gb|ADV86872.1| hypothetical protein VVMO6_01850 [Vibrio vulnificus MO6-24/O]
Length = 212
Score = 38.7 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 18/122 (14%)
Query: 33 DHPSVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISGVH-----------HSVSKDILL 80
V ++V+ +R+ E A L + I SG + + L
Sbjct: 19 RLTPVDCLLVMCSNDLRVAEHAANLYKQGYAPYILFSGGEGRFTEGLFEKSEAETFAELA 78
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLEL 138
+ + + I + K+ N+ N + + F ++V + R
Sbjct: 79 KASGVPAEA----ILLETKSSNSGENVRFSEQLLIDKGLVFESFILVQKPFMERRALATF 134
Query: 139 QR 140
++
Sbjct: 135 EK 136
>gi|183598256|ref|ZP_02959749.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
gi|188020426|gb|EDU58466.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
Length = 233
Score = 38.7 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + + +SG + HS ++ I ++K I+ + I + + T +
Sbjct: 69 RIQGAADAYHSGKVKYLLLSGDNGAHSYNEPIAMRKDLIKAGVPASKIVLDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ +NF I+T +H R + Q + P
Sbjct: 129 VVRTRKVFDTDNFT---IITQRFHCERALFIAKHKGIDAQCLAVP 170
>gi|182414370|ref|YP_001819436.1| hypothetical protein Oter_2554 [Opitutus terrae PB90-1]
gi|177841584|gb|ACB75836.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 264
Score = 38.7 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 26/142 (18%)
Query: 31 IPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFIS----G 69
P+ A+VVL G R+ A+ +L E I G
Sbjct: 82 PPNLAGCQAVVVLGGGHSDSPTLSAVNQLSESAQGRLLEAYRILRALPPEARLIVCGRGG 141
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ +L Q + + +TE A + ++ +VT +
Sbjct: 142 PNRPSHASVLAQAATSLGVSPHRIVRLD-TPRDTEDEAAQLRELLGRD--TPFALVTSAW 198
Query: 130 HMPRTFLELQRINSTVQFIPYP 151
H+PR ++ ++ +P P
Sbjct: 199 HLPRATALMRGA--GLRPVPCP 218
>gi|28379589|ref|NP_786481.1| transcription regulator [Lactobacillus plantarum WCFS1]
gi|254557733|ref|YP_003064150.1| transcription regulator [Lactobacillus plantarum JDM1]
gi|300769529|ref|ZP_07079415.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308181819|ref|YP_003925947.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|28272429|emb|CAD65353.1| transcription regulator [Lactobacillus plantarum WCFS1]
gi|254046660|gb|ACT63453.1| transcription regulator [Lactobacillus plantarum JDM1]
gi|300492944|gb|EFK28126.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308047310|gb|ADN99853.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 298
Score = 38.7 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 26/156 (16%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI---SGVHHSVSKDI 78
F V + H A L P + + LE ++G +FI SGV +
Sbjct: 4 FAYEVFSTVVAQHTFYQAAATLNVTPSAVSHSINQLEKELGFPLFIRNRSGVELTSDGRQ 63
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI-----VTHDYHMPR 133
+L + + LNTE N ++ + + + V I V ++ +PR
Sbjct: 64 VLPYVQ--------------EILNTESNLRQVADNIQGLHSGSVRIGGFSSVCINW-LPR 108
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
E ++ ++ + E ++ KI +
Sbjct: 109 IIREFNHKYPDIKI---SVMQGNFNEITNWAKIGTI 141
>gi|327331177|gb|EGE72917.1| hypothetical protein HMPREF9344_01832 [Propionibacterium acnes
HL097PA1]
Length = 349
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%)
Query: 10 VCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
+ L + GF+ ++ V + P IVVL R++R
Sbjct: 131 MALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLLASRLDRGIGQWR 190
Query: 59 ----NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA- 110
I SG ++ + + + + C+ + +A NT+ N +
Sbjct: 191 TDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSR 250
Query: 111 --------------SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + V++ T YH R +R V+ + P ++
Sbjct: 251 QVMPTQVRSVPSRRAEAARERQNPQVVVATSSYHAVRAAELCRRQGLRVRVLGAPTATYF 310
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLS 183
L +L EY+ +L
Sbjct: 311 LPSA-----------MLREYIALLASR 326
>gi|326802974|ref|YP_004320792.1| hypothetical protein HMPREF9243_0445 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651445|gb|AEA01628.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 345
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 63 EKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK-N 117
+ +SG + S+ ++ + Q + E I +A NT GN + E+
Sbjct: 205 PILIVSGAATVENSECSEADVMAQYLKSQGIPEEKIWREDQATNTHGNFAYSKQLIERIQ 264
Query: 118 NFHH--VLIVTHDYHMPRTFL 136
+ +T +H+ R+ L
Sbjct: 265 PVKSAHIAFITSAFHLYRSQL 285
>gi|254507165|ref|ZP_05119302.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219549875|gb|EED26863.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 269
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 14/112 (12%)
Query: 46 EPIRIERAFELLEN---QIGEKIFISGVHHSVSKDILLQKIPIRQDLA----ECCIDIGY 98
R++ + L+ IF GV + Q L + +
Sbjct: 18 GQSRVDYLADYLQRFELAQTALIFCGGVTSGQTDAEAKAMYTRFQQLPIDAKPALVMLEP 77
Query: 99 KALNTEGNAQEAS-AWAEKNNFH-----HVLIVTHDYHMPRTFLELQRINST 144
+ NT N + A+ + N F+ V V++DYH+ R ++Q +
Sbjct: 78 DSTNTVENVENAALKMIDSNRFNLDECLKVFFVSNDYHLER-IFQIQTLMDE 128
>gi|222112319|ref|YP_002554583.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax ebreus
TPSY]
gi|254801232|sp|B9MGI8|1A1D_DIAST RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|221731763|gb|ACM34583.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax ebreus
TPSY]
Length = 338
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + ++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEKELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRARRVI--GIDASA 226
Query: 75 SK----DILLQKIPIRQDLAE--CCIDIGYKALNTE 104
+ +L+ DL E I L+T
Sbjct: 227 TPEKTHAQILRIAQSTADLVELGQDITAEDVVLDTR 262
>gi|328473116|gb|EGF43964.1| hypothetical protein VP10329_20580 [Vibrio parahaemolyticus 10329]
Length = 212
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 37/120 (30%), Gaps = 19/120 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+R + H ++ ++V +G R L E E + + +
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDG--LFEKSEAE-----------TFADIARL 80
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR 140
+ I + ++ N+ N + ++ +++V + R ++
Sbjct: 81 AGVE----SNAILLETRSTNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEK 136
>gi|307707010|ref|ZP_07643807.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307617536|gb|EFN96706.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 339
Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 27/157 (17%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------I 48
+ + + F F++FI Y + + IP I++ L GE
Sbjct: 125 LNILFAFIAYSYFIFGFAFVAFILYSILYLFIPKKKHYDFIIIHGAGLLDGEKVTPLLKR 184
Query: 49 RIERAFELLENQIGEKIFIS-----GVHHSVSKDI-----LLQKIPIRQDLAECCIDIGY 98
RI++A E I I G +S+ LL++ + QD I +
Sbjct: 185 RIDKAVEAYHKSKNPHIKIIASGGQGGDEKISEAQAITNYLLKETDVPQDA----IILED 240
Query: 99 KALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
++ T N + EK L VT+DYH+ RT
Sbjct: 241 QSRTTYENLLFSKELGEKLVAKPQFLFVTNDYHVFRT 277
>gi|209524650|ref|ZP_03273197.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
gi|209494794|gb|EDZ95102.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
Length = 235
Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 9/135 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ ++F +G + ++ M V +VL G IR E L +
Sbjct: 19 VKILLIAACALMLFMSLGLV---NHLLIMRSSAREPVDTFLVL-GGSIRREIYVSQLATE 74
Query: 61 IGEK-IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ I IS +++ R + + A +T GN + +
Sbjct: 75 YPQIPIIIS---KGSDDPCIVKLFE-RNKTPSQGVWLEKCANSTFGNYMFSQPLLTQWGA 130
Query: 120 HHVLIVTHDYHMPRT 134
HV I+T D H+PR
Sbjct: 131 RHVKILTSDTHLPRA 145
>gi|262173788|ref|ZP_06041465.1| hypothetical protein VII_000878 [Vibrio mimicus MB-451]
gi|261891146|gb|EEY37133.1| hypothetical protein VII_000878 [Vibrio mimicus MB-451]
Length = 287
Score = 38.3 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 18/116 (15%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--------CI 94
R++ A + EN +F GV + + Q + +
Sbjct: 24 GKSRVDGLLSALQCHENSSALIVFCGGVTAGQTVSEAQRMHEYFQQQVQQKGLVLQHVDV 83
Query: 95 DIGYKALNTEGNAQEASA-WAEKNNFH-----HVLIVTHDYHMPRTFLELQRINST 144
+ ++ ++ N + + H + +V+ DYH+ R +E+Q +
Sbjct: 84 LLEQQSTSSVENIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR-IIEIQDLMDE 138
>gi|269127423|ref|YP_003300793.1| hypothetical protein Tcur_3216 [Thermomonospora curvata DSM 43183]
gi|268312381|gb|ACY98755.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 244
Score = 38.3 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 22/148 (14%)
Query: 3 YFWYGLFVCLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RI 50
V L +G+ + + Q + P AIVVL G R+
Sbjct: 41 LLGILAVVVLTPLTVGWRVWY-----QARQDETPKSDAIVVL-GAAQYNGVPSPTLRWRL 94
Query: 51 ERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
E A +L + I G + D + + + + +T +
Sbjct: 95 EHAVKLYRRGVAPAIVTVGGKQPGDNYTEADAGRNWLIKERQVPADKVVAVPVGSDTLES 154
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
Q A + +H ++VT +H R+
Sbjct: 155 MQAVGAKFRELKWHSAVLVTDPWHGLRS 182
>gi|291541508|emb|CBL14618.1| Uncharacterized conserved protein [Ruminococcus bromii L2-63]
Length = 256
Score = 38.3 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 29/155 (18%)
Query: 8 LFVCLIFFIM--GFISFIRY---------VKQMHIPDHPSVSAIVVLTGEP--------- 47
LF ++F ++ GFI+F Y P S AIV+ G
Sbjct: 64 LFTKIVFRVVNIGFIAFAVYGAIVTSAMVWATCQAPPENST-AIVL--GAQVKPWGPSVI 120
Query: 48 --IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI+ A L++ +SG +S+ + + + + + K+ N
Sbjct: 121 LRGRIDAAKSYLDDSPNANAVLSGGQGSDEVMSEAQCMYNVLTESKIDSSRLYMEDKSTN 180
Query: 103 TEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFL 136
T N + + E NN + IVT +H R +
Sbjct: 181 TTENIRNSMKIIEDNNLNTDITIVTDGFHQLRARI 215
>gi|121596164|ref|YP_988060.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax sp. JS42]
gi|120608244|gb|ABM43984.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax sp. JS42]
Length = 356
Score = 38.3 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + ++ G+ S
Sbjct: 188 LGFVGFAEEVRQQEKELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRARRVI--GIDASA 244
Query: 75 SK----DILLQKIPIRQDLAE--CCIDIGYKALNTE 104
+ +L+ DL E I L+T
Sbjct: 245 TPEKTHAQILRIAQSTADLVELGQDITAEDVVLDTR 280
>gi|251792634|ref|YP_003007360.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
gi|247534027|gb|ACS97273.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
Length = 237
Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI--RQDLAECCIDIGYKALNTE 104
R+ A L E + + + +SG + ++ + + + + + I + + T
Sbjct: 83 YNRLLAAQRLFEAKKVDYLLLSGDNRTLQYNEPRTMLKDLKKMGVPQEFIYLDFAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSS 162
+ A + + + I++ +H R + I++ YP + +
Sbjct: 143 DSVIRADQVFKAH---SLTIISQKFHCERALFIAKFHNIDAICFVADYPQVYSFVRVREF 199
Query: 163 IFKIKILRVLLIE 175
+++ + L++E
Sbjct: 200 FARLQAVWDLMVE 212
>gi|226492475|ref|NP_001142766.1| hypothetical protein LOC100275122 [Zea mays]
gi|195609338|gb|ACG26499.1| hypothetical protein [Zea mays]
Length = 330
Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 17/93 (18%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVH- 71
+GF+ F V+Q IVV +TG + ++ G+
Sbjct: 173 LGFVGFAEEVRQQEKESGFKFDYIVVCAVTGSTQ---AGMIVGFAADGRARRVI--GIDA 227
Query: 72 ---HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+KD +L+ +L +++G++
Sbjct: 228 SAKPDKTKDQILRIAKNTAEL----VELGHEIT 256
>gi|163787816|ref|ZP_02182263.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
gi|159877704|gb|EDP71761.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
Length = 183
Score = 38.3 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 17/146 (11%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A +L E I +SG + + + I + + E I + Y T +
Sbjct: 43 RIDAAVKLYRAGKIEYILVSGDNGRKGYDEPTDFKSDLIAKGIPEDKIFLDYAGFRTLDS 102
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + I++ ++H R ++ + + + +
Sbjct: 103 VIRAKEIF---GQTSITIISQEFHNQRAVYIANHF--DIKAVAFNAKNP--------RQG 149
Query: 167 KILRVLLIEYLKILLLSIQLSLSTQT 192
KI R EYL SI L + Q
Sbjct: 150 KITR--AREYLARSKASIDLVFNVQP 173
>gi|300932867|ref|ZP_07148123.1| hypothetical protein CresD4_02296 [Corynebacterium resistens DSM
45100]
Length = 341
Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 64/233 (27%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS---VSAIVVLTGE----------PIR 49
W GL F++ ++ + + AI+VL R
Sbjct: 98 LAWLGLANHFSRFVLKGVASTKKLVNESPHSDRQLAAADAIIVLGAGLTGRKPSPVLARR 157
Query: 50 IERAFELLE----------NQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECC-- 93
++RA ++ I +SG + + + + L
Sbjct: 158 LDRAAQVARQLEAIRPAVVAGQQGVIIVSGGQGADEPCSEAEAMARYLRTEAQLGGADSR 217
Query: 94 --IDIGYKALNTEGNAQEASAWAEKNNFH---------------------------HVLI 124
+ +A +TE N ++ ++ +++
Sbjct: 218 WEVLQEDEATSTEENLANSTRILQERRAGTSGTNTGTPGTNTANPGSRTKRDDEMCTIVV 277
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
VT D+H+PRT + + Y ++ + + + EY+
Sbjct: 278 VTSDFHVPRTRWHAKHAERDFPGVAYRVVGAETPAGARPAAY------VREYV 324
>gi|24378805|ref|NP_720760.1| hypothetical protein SMU.302 [Streptococcus mutans UA159]
gi|290581191|ref|YP_003485583.1| hypothetical protein SmuNN2025_1665 [Streptococcus mutans NN2025]
gi|24376679|gb|AAN58066.1|AE014879_3 conserved hypothetical protein; putative membrane protein
[Streptococcus mutans UA159]
gi|254998090|dbj|BAH88691.1| conserved hypothetical protein [Streptococcus mutans NN2025]
Length = 337
Score = 38.3 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 20/159 (12%)
Query: 4 FWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRIE 51
+ L + F + FI+F+ Y + + IP + I++ L G RI+
Sbjct: 128 LYALLSASFLIFSVAFIAFMLYSILYLIIPKNKHYDYIIIHGAGLLHGNQVTPLLKRRID 187
Query: 52 RAFELLENQIGE--KIFISGV-HHSVSKDILLQKI----PIRQDLAECCIDIGYKALNTE 104
+A E K+ SG + D+ + + ++ +T
Sbjct: 188 KALEAFRQSKNSQVKLIASGGLGSGETISEAAAIANYIRKQASDIPNDRLLLEEQSHSTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRIN 142
N + AEK L VT+ YH+ RT + +R++
Sbjct: 248 ENLLFSKQLAEKEMKKPRFLFVTNAYHVFRTSVYARRLH 286
>gi|226327284|ref|ZP_03802802.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
gi|225204502|gb|EEG86856.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
Length = 379
Score = 38.3 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 22/98 (22%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
A++V+TG + +A + ++ L+ ++ +A I
Sbjct: 241 PDAMIVVTGG---VPKAHQ-------------------TEGKLMADWLVKNGIAPERIFQ 278
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A T NA + K+ +I++ H+ R
Sbjct: 279 ENYARTTVENALFSRYALTKHRIKTAVIISSGSHVRRA 316
>gi|332981632|ref|YP_004463073.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON]
gi|332699310|gb|AEE96251.1| chromosome segregation protein SMC [Mahella australiensis 50-1 BON]
Length = 1188
Score = 38.3 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 50 IERAFELLENQIGEKI----FISGVHHSVSK-DILLQKIPIRQDLAECCIDIGYKALNTE 104
+E +++ G+K+ +SG +++ IL + IR C +D AL+
Sbjct: 1073 LEAGIDIIAQPPGKKLQNIMLLSGGERTLTAIAILFALLEIRPSPF-CVLDEIEAALDEV 1131
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
NAQ + + + + + +I+TH R +E+ V + +
Sbjct: 1132 -NAQRFANFIQDYSQNIQFIIITH----RRPTMEVAGALYGVSMVERGV 1175
>gi|332289791|ref|YP_004420643.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
gi|330432687|gb|AEC17746.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
Length = 242
Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTE 104
R+ A L+++ + + +SG + ++ + + ++ + + Y T
Sbjct: 91 YNRLSAAESLIKHHKVDYLLLSGDNRTLQYNEPQRMFKDLLKMGVPSQTMFFDYAGFRTL 150
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + + I+T +H R
Sbjct: 151 DSVVRADKIFKAQ---SLTIITQRFHCERALF 179
>gi|229513224|ref|ZP_04402689.1| hypothetical protein VCB_000869 [Vibrio cholerae TMA 21]
gi|229349634|gb|EEO14589.1| hypothetical protein VCB_000869 [Vibrio cholerae TMA 21]
Length = 317
Score = 38.3 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 53/171 (30%), Gaps = 44/171 (25%)
Query: 46 EPIRIERAFELLENQ---IGEKIFISGVHHSVSKDIL--------LQKIPIRQDLAECCI 94
R++ L +F G+ + ++ + + +
Sbjct: 24 GKSRVDGLISELRCHENTAARVVFCGGITLGQTVSEAKRMHEYFEQRRQQLGLSFPQIDV 83
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH------HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + ++ + +V++DYH+ R E+Q++
Sbjct: 84 LLEQESTSTVENIEHVAQVLLESGVVQRGETLALTLVSNDYHLKR-IFEIQKLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V+ +PYP + + ++ RV L
Sbjct: 143 RKLVERCAQSGVRLEIARDLKAHLCVPYPHQNPQGLRFLWVDELTTYRVFL 193
>gi|325126040|gb|ADY85370.1| Chromosome segregation protein Smc [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 1186
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R+ E E++ G+K+ +SG S++ LL +
Sbjct: 1051 VVFGGGNARLTLTDPDNLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFARFLRQYDSQTQFIVITHR 1151
>gi|319442395|ref|ZP_07991551.1| protein [Corynebacterium variabile DSM 44702]
Length = 196
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A EL + + +SG + + + + + I ++ +T
Sbjct: 90 DRLDAATELSRTHLLNPVIVSGGATQTDCPTEAAAMESGLHERGVTNQVLIEDESDSTVA 149
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
N Q + ++VT H R + ++ + Y
Sbjct: 150 NVQNTKSMISDRG-GLAVVVTSSPHNVRALQNFRDA--GIEAVAY 191
>gi|294010811|ref|YP_003544271.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Sphingobium japonicum UT26S]
gi|292674141|dbj|BAI95659.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family [Sphingobium japonicum UT26S]
Length = 201
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
L F+ FI+F Q P P V L RI A L +
Sbjct: 5 LALFLAAFIAFTPAFAQ-TAPVPPPADVKVALETGSGRIVVAVHLAQA 51
>gi|116514342|ref|YP_813248.1| chromosome segregation ATPase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093657|gb|ABJ58810.1| condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 1186
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R+ E E++ G+K+ +SG S++ LL +
Sbjct: 1051 VVFGGGNARLTLTDPDNLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFARFLRQYDSQTQFIVITHR 1151
>gi|104774252|ref|YP_619232.1| chromosome partition protein SMC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423333|emb|CAI98180.1| Chromosome partition protein SMC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 1181
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIR---------IERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R +E E++ G+K+ +SG S++ LL +
Sbjct: 1046 VVFGGGNARFTLTDPDNLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1105
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1106 PVPFCVLDEVEAALD-DANVARFARFLRQYDSQTQFIVITHR 1146
>gi|127512358|ref|YP_001093555.1| hypothetical protein Shew_1429 [Shewanella loihica PV-4]
gi|126637653|gb|ABO23296.1| protein of unknown function DUF218 [Shewanella loihica PV-4]
Length = 246
Score = 38.3 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 14/148 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ L ++ +SG +V + ++ I + I A +T
Sbjct: 105 RLTEGVRQLSLGQDCQLVVSGWGGSDAVPQAQVMANAAIELGVNPERIIKFPLAKDTLEE 164
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
AQ + F +VT H+PR + + P + + +++
Sbjct: 165 AQFLKWEIGDSPFR---LVTSATHLPRAMMIFHQAG----MHPQGAPADFIARGGYWWQL 217
Query: 167 KILRVL-----LIEYLKILLLSIQLSLS 189
+L + EY+ L I+ +L+
Sbjct: 218 DARNLLASQRSIHEYVGQTWLKIKFALA 245
>gi|254409849|ref|ZP_05023630.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183846|gb|EDX78829.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 325
Score = 38.3 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 14/135 (10%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLEN-QIGEKIFIS--------GVHHSVSKDI 78
+ P V LT RI A +L + +S G + +
Sbjct: 139 TTQPDEPPRTQ--VQLTDTGDRILYAAQLYRQSGNNPLVVVSAGPRPNLQGNQDQIVEAN 196
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFL 136
++ + ++ + + I + +N +A+E + V +VT Y+ R
Sbjct: 197 DIRSLLVQFGVPQSRIVLEPTGINLRTSAEEVEDILRDRGIADNRVFLVTSAYNSRRAQQ 256
Query: 137 ELQRINSTVQFIPYP 151
+ + + P
Sbjct: 257 AFRSVGLN-NVVAKP 270
>gi|297559723|ref|YP_003678697.1| hypothetical protein Ndas_0746 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844171|gb|ADH66191.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 370
Score = 38.3 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 23/160 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIE 51
+ L V + +G +++ YV + + AIVVL G R+
Sbjct: 172 WLVSLLLVTALAVPVGTWAWVWYVARQD--ERTPSDAIVVL-GASQYNGVPSPVFEARLR 228
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY-----KALNTEGN 106
+A L + I V + D + R L E + + +T +
Sbjct: 229 QAQVLYLEGVAP--VIVTVGGKLPGDNFTEAASGRNWLIEVGVPGDQVIAVEEGSDTLQS 286
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + E N++ ++V+ +H R+ E ++
Sbjct: 287 IEAVAGVFEANSWDTAILVSDPWHSLRS--ERMAAAHGIE 324
>gi|299138111|ref|ZP_07031291.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298600041|gb|EFI56199.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 417
Score = 38.3 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSK----DILLQKIPIRQDLAECCIDIGYK 99
R A E I +SG VH S ++ + + + + E I +
Sbjct: 272 GRKRTALAAEAYHAGKAPFILVSGGYVHPSQTRFSEAIEMKKALLSDYHVPEEAILVDPH 331
Query: 100 ALNTEGNAQEASAWAEKNNF 119
A +T N + A+ + N
Sbjct: 332 ARHTTTNMRNAAREIYRYNI 351
>gi|326319165|ref|YP_004236837.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323376001|gb|ADX48270.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 338
Score = 38.3 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF++F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVAFAEEVRQQEKELGFQFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+++ +L+ +L +++G + +
Sbjct: 227 KPEQTREQILRIARNTAEL----VELGREITD 254
>gi|302407508|ref|XP_003001589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359310|gb|EEY21738.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 221
Score = 38.3 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 26/171 (15%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIE-RAFELLENQIGEKIFISGVHHSV--------SKDI 78
M +P P+ A+ L +R+ RA +L N + + SG + +
Sbjct: 23 NMPLPASPAT-AVFCLCSLDVRVAARAAQLFLNGVAPLLIFSG-NTGALTAGLFDKPEAE 80
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFL 136
I + + I + A NT N + E ++V Y RT+
Sbjct: 81 FFADIARSMGVPDASILVEPTATNTGENVRFTRKLLEDRGVKVESFILVQKPYMERRTYA 140
Query: 137 ELQR-----------INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
+ + + F YP ++ +SI ++R+ EY
Sbjct: 141 TFLKQWGDETTGFTVTSPEMSFEEYPDEANPRGLVTSIMVGDLVRI--REY 189
>gi|307705359|ref|ZP_07642221.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307621146|gb|EFO00221.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 259
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------I 48
+ + + F F++FI Y + + IP I++ L GE
Sbjct: 45 LNILFAFIAYSYFIFGFAFVAFILYSILYLFIPKKKHYDFIIIHGAGLLDGEKVTPLLKR 104
Query: 49 RIERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALN 102
RI++A E I I G +S+ + + + D+ + I + ++
Sbjct: 105 RIDKAVEAYYKSKNSNIKIIASGGKGADEKISEAQAITNYLLEETDVPQDAIILEDQSRT 164
Query: 103 TEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
T N + E+ L VT+DYH+ RT
Sbjct: 165 TYENLLFSKELGEELVAKPQFLFVTNDYHVFRT 197
>gi|225865467|ref|YP_002750845.1| hypothetical protein BCA_3578 [Bacillus cereus 03BB102]
gi|229185722|ref|ZP_04312900.1| hypothetical protein bcere0004_32730 [Bacillus cereus BGSC 6E1]
gi|225786481|gb|ACO26698.1| conserved domain protein [Bacillus cereus 03BB102]
gi|228597809|gb|EEK55451.1| hypothetical protein bcere0004_32730 [Bacillus cereus BGSC 6E1]
Length = 225
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
AI V G P + E +G +I ++G H S + L + I
Sbjct: 31 PQKCDAIFVFGGSHPGNWQAPLEAYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 90
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V R + L++
Sbjct: 91 VNKLMEHGVPTDAILFETNSLHSIANVMEAKKIFDFTKVNRLLFVCKSLGAGRQYRVLKK 150
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 151 HLPKTITCIPYTFDTSFDGEFIMNRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 207
>gi|167949218|ref|ZP_02536292.1| hypothetical protein Epers_23051 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 92
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
P P V A++ L G RI LL
Sbjct: 48 NSRPPAWPLVLAVIALAGGAGRIVDGPALLGKG 80
>gi|325686338|gb|EGD28368.1| hypothetical protein HMPREF9381_2259 [Streptococcus sanguinis SK72]
Length = 211
Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 24/181 (13%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSV---- 74
ISF+ I + S + V +G P E+A E + +I ++G
Sbjct: 20 ISFLTKSVFGKIIEPQSCDVLFVFSGTHPGHWEKAIEAYQKGYVRRIIVTGGRSLTGMPH 79
Query: 75 ------SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
++ ++ + + + E I + NT N A + N V+ +
Sbjct: 80 PDWNGHTEAEVIIQHLLAAGIPEKAIKSESSSSNTLENVLFAKEIFDFNTVESVMFICKS 139
Query: 129 YH----MPRTFLELQRINSTVQFIPY---PIISH-DLEENSSI-FKIKILRVLLIEYLKI 179
H RT Q + +++IPY ++ +S + I RV EYL++
Sbjct: 140 -HATGRQWRTLA--QHLPKHLRYIPYTFNAFYKDVEIGRDSWMNTDIGKSRVWG-EYLRL 195
Query: 180 L 180
L
Sbjct: 196 L 196
>gi|296118003|ref|ZP_06836585.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295968889|gb|EFG82132.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 15/116 (12%)
Query: 35 PSVSAIVVLTGE----------PIRIERAFELLENQIGEKIFIS----GVHHSVSKDILL 80
A++VL R++++ E+ + + I+ G + +
Sbjct: 178 TEPEAVIVLGSGLINGEVPPLLAARLDKSLEVQKKFSNHPVIITSGGQGSDEPRPEGEAM 237
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + + + ++ NTE N + + V++ T YH+ R L
Sbjct: 238 RDYLLSKGVEPARVVAETESRNTEENLHFSRKLLTDPS-DQVVVATSSYHVFRAAL 292
>gi|125623301|ref|YP_001031784.1| hypothetical protein llmg_0434 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492109|emb|CAL97038.1| SanA protein homolog [Lactococcus lactis subsp. cremoris MG1363]
gi|300070052|gb|ADJ59452.1| hypothetical protein LLNZ_02260 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 194
Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G VS+ ++K + ++ I KA +T N + + ++VT+D
Sbjct: 87 GADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHGKT----VVVTND 142
Query: 129 YHMPRTFLELQRINSTVQ 146
+H+ R R V+
Sbjct: 143 FHLYRALYLASRQGLKVE 160
>gi|116511272|ref|YP_808488.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
gi|116106926|gb|ABJ72066.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
Length = 178
Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G VS+ ++K + ++ I KA +T N + + ++VT+D
Sbjct: 71 GADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHGKT----VVVTND 126
Query: 129 YHMPRTFLELQRINSTVQ 146
+H+ R R V+
Sbjct: 127 FHLYRALYLASRQGLKVE 144
>gi|317033599|ref|XP_001395185.2| hypothetical protein ANI_1_1366104 [Aspergillus niger CBS 513.88]
Length = 275
Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPR---TFLELQRINSTV 145
C + + K+ N NA E A +N +++V D M R E
Sbjct: 121 CTVLLEDKSTNCGQNATETRALLARNGIPEPKSMIVV-QDPTMARRTVASFEKAYAPRPP 179
Query: 146 QFIPYPIISHDLEENS 161
+ +PII ++
Sbjct: 180 NLLSWPIIVPRVKMEG 195
>gi|153806679|ref|ZP_01959347.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
gi|149131356|gb|EDM22562.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
Length = 212
Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI EL + I ISG + ++ ++K +++ + E I + Y T +
Sbjct: 69 RIFATLELYKAGKINYILISGDNRKENYNEPEEMKKALMQRGVPEKYIYLDYAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + I++ +H R
Sbjct: 129 VVRAKE---VFGQSRLTIISQRFHNERAIY 155
>gi|134079894|emb|CAK41026.1| unnamed protein product [Aspergillus niger]
Length = 282
Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPR---TFLELQRINSTV 145
C + + K+ N NA E A +N +++V D M R E
Sbjct: 128 CTVLLEDKSTNCGQNATETRALLARNGIPEPKSMIVV-QDPTMARRTVASFEKAYAPRPP 186
Query: 146 QFIPYPIISHDLEENS 161
+ +PII ++
Sbjct: 187 NLLSWPIIVPRVKMEG 202
>gi|255655858|ref|ZP_05401267.1| hypothetical protein CdifQCD-2_09204 [Clostridium difficile
QCD-23m63]
gi|296450861|ref|ZP_06892611.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879136|ref|ZP_06903131.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260332|gb|EFH07177.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429679|gb|EFH15531.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 248
Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A + L+ + +SG ++++ ++ I+ + + I K+ NT
Sbjct: 110 KGRLNTALKYLKVNDNCYVVVSGGKGSGENITEAKAMKDYLIKNGIDKNRIIEEDKSTNT 169
Query: 104 EGNAQEASAWAEKNNFHHV-----LIVTHDYHMPRT-FLELQRINSTVQFIP 149
N + + E+ + + IVT D+H+ R+ L + F
Sbjct: 170 YENFKYSKFKIEERSERKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYA 221
>gi|302336857|ref|YP_003802063.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
gi|301634042|gb|ADK79469.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
Length = 240
Score = 37.9 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RIE A L + + +SG + S + +++ + + I + Y T +
Sbjct: 96 RIEAAKALFDAGKVRYLLVSGDNARKSYNEPVEMRQALVEMGVPIDRIVLDYAGFRTLDS 155
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+++F +IV+ +H R
Sbjct: 156 VVRCQEVFGQDHF---IIVSQRFHNERALY 182
>gi|255018888|ref|ZP_05291014.1| hypothetical protein LmonF_16276 [Listeria monocytogenes FSL
F2-515]
Length = 76
Score = 37.9 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
K+ TE N + ++ K N +IVT DYHM R + +R +P
Sbjct: 2 KSKRTEENIKYSN---AKFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 49
>gi|327330943|gb|EGE72687.1| hypothetical protein HMPREF9337_01510 [Propionibacterium acnes
HL096PA3]
Length = 349
Score = 37.9 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%)
Query: 10 VCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
+ L + GF+ ++ V + P IVVL R++R
Sbjct: 131 MALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLLASRLDRGIGQWR 190
Query: 59 ----NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA- 110
I SG ++ + + + + C+ + +A NT+ N +
Sbjct: 191 TDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSR 250
Query: 111 --------------SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + V++ T YH R +R V+ + P ++
Sbjct: 251 QVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLGAPTATYF 310
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLS 183
L +L EY+ +L
Sbjct: 311 LPSA-----------MLREYIALLASR 326
>gi|89054691|ref|YP_510142.1| hypothetical protein Jann_2200 [Jannaschia sp. CCS1]
gi|88864240|gb|ABD55117.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 252
Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 61/202 (30%), Gaps = 19/202 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMH--IPDHPSVSAIVVL------TGEPI----- 48
R+ + + + + Y+ P + AI+ L T P
Sbjct: 32 RFVGRVILAGIAAYALILSGLAVYIAAAPGEPPVPEAHDAIICLGAGLSPTQGPDHAGPA 91
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSK-DILLQKIPIRQDLAECCIDIGYKALNTE 104
R L + + ++G + + ++ + + E I A +T
Sbjct: 92 SRARAVTCAGLYGAAVAPLVVVTGEGIADYPVSTAMARVLMDHGVPEHAIVNEPAAGSTI 151
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
NA + V++VT +H+PR + + Y + +
Sbjct: 152 QNAAFSVPLLPTET-TRVVLVTQRFHLPRAIATFRIFTPW-EVTGYEAPLPGQDAVAVHE 209
Query: 165 KIKILRVLLIEYLKILLLSIQL 186
+ R LL E ++++
Sbjct: 210 RRTPTRWLLREVAAYGSNAVRV 231
>gi|50842156|ref|YP_055383.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289426845|ref|ZP_06428571.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295130244|ref|YP_003580907.1| hypothetical protein HMPREF0675_3738 [Propionibacterium acnes
SK137]
gi|50839758|gb|AAT82425.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289159934|gb|EFD08112.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291375530|gb|ADD99384.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763888|gb|EFS35252.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771407|gb|EFS37373.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313808239|gb|EFS46713.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811298|gb|EFS49012.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313814824|gb|EFS52538.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819005|gb|EFS56719.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313820836|gb|EFS58550.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313822403|gb|EFS60117.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825802|gb|EFS63516.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313828147|gb|EFS65861.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313830950|gb|EFS68664.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313833376|gb|EFS71090.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|314915093|gb|EFS78924.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918753|gb|EFS82584.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920554|gb|EFS84385.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314925593|gb|EFS89424.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932228|gb|EFS96059.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954656|gb|EFS99062.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314958523|gb|EFT02625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314959880|gb|EFT03982.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314968297|gb|EFT12396.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314973834|gb|EFT17930.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976488|gb|EFT20583.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979234|gb|EFT23328.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314983400|gb|EFT27492.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986818|gb|EFT30910.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314989379|gb|EFT33470.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315080102|gb|EFT52078.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083984|gb|EFT55960.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315085185|gb|EFT57161.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089022|gb|EFT60998.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315096455|gb|EFT68431.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099022|gb|EFT70998.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315100897|gb|EFT72873.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315107172|gb|EFT79148.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108116|gb|EFT80092.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326860|gb|EGE68643.1| hypothetical protein HMPREF9338_01734 [Propionibacterium acnes
HL096PA2]
gi|327442936|gb|EGE89590.1| hypothetical protein HMPREF9570_02441 [Propionibacterium acnes
HL043PA1]
gi|327445060|gb|EGE91714.1| hypothetical protein HMPREF9571_02045 [Propionibacterium acnes
HL043PA2]
gi|327447433|gb|EGE94087.1| hypothetical protein HMPREF9568_00729 [Propionibacterium acnes
HL013PA2]
gi|327450039|gb|EGE96693.1| hypothetical protein HMPREF9581_02486 [Propionibacterium acnes
HL087PA3]
gi|327455410|gb|EGF02065.1| hypothetical protein HMPREF9586_01447 [Propionibacterium acnes
HL083PA2]
gi|328752707|gb|EGF66323.1| hypothetical protein HMPREF9579_02249 [Propionibacterium acnes
HL087PA1]
gi|328752927|gb|EGF66543.1| hypothetical protein HMPREF9563_02180 [Propionibacterium acnes
HL020PA1]
gi|328759376|gb|EGF72992.1| hypothetical protein HMPREF9588_00221 [Propionibacterium acnes
HL025PA2]
gi|328760301|gb|EGF73872.1| hypothetical protein HMPREF9343_01965 [Propionibacterium acnes
HL099PA1]
gi|332675082|gb|AEE71898.1| hypothetical protein PAZ_c07120 [Propionibacterium acnes 266]
Length = 349
Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%)
Query: 10 VCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
+ L + GF+ ++ V + P IVVL R++R
Sbjct: 131 MALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLLASRLDRGIGQWR 190
Query: 59 ----NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA- 110
I SG ++ + + + + C+ + +A NT+ N +
Sbjct: 191 TDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSR 250
Query: 111 --------------SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + V++ T YH R +R V+ + P ++
Sbjct: 251 QVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLGAPTATYF 310
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLS 183
L +L EY+ +L
Sbjct: 311 LPSA-----------MLREYIALLASR 326
>gi|325685924|gb|EGD27989.1| cell division protein Smc [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 1186
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R+ E E++ G+K+ +SG S++ LL +
Sbjct: 1051 VVFGGGNARLTLTDPDDLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVVRFARFLRQYDSQTQFIVITHR 1151
>gi|313124069|ref|YP_004034328.1| condensin subunit smc [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280632|gb|ADQ61351.1| Condensin subunit Smc [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 1186
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R+ E E++ G+K+ +SG S++ LL +
Sbjct: 1051 VVFGGGNARLTLTDPDDLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVVRFARFLRQYDSQTQFIVITHR 1151
>gi|300811714|ref|ZP_07092188.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497290|gb|EFK32338.1| chromosome segregation protein SMC [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 1186
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRI---------ERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G R+ E E++ G+K+ +SG S++ LL +
Sbjct: 1051 VVFGGGNARLTLTDPDDLLESGVEIIAQPPGKKLQRLSLLSGGERSLTAITLLFAMLEVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + + + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVVRFARFLRQYDSQTQFIVITHR 1151
>gi|86147081|ref|ZP_01065398.1| hypothetical protein MED222_12213 [Vibrio sp. MED222]
gi|85835146|gb|EAQ53287.1| hypothetical protein MED222_12213 [Vibrio sp. MED222]
Length = 225
Score = 37.9 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 30/103 (29%), Gaps = 10/103 (9%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGV-------HHSVSKDILLQKIP 84
D I VL R+ A EL +I I SG S+ I
Sbjct: 35 DITPSDCIFVLCSNDTRVAEYAAELYHQKIAPYIVFSGGMGRFTEGSFERSEAETFASIA 94
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIV 125
+ + I I A NT N + + + +V
Sbjct: 95 RDSGVPDLDIIIEKHATNTGENVRFTYELLAQRGLSPKRLTLV 137
>gi|332364900|gb|EGJ42668.1| hypothetical protein HMPREF9389_0599 [Streptococcus sanguinis
SK355]
Length = 211
Score = 37.9 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 22/180 (12%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSV---- 74
ISF+ I + + V +G E+A E + +I ++G
Sbjct: 20 ISFLTKSVFGEIIEPQPCDVLFVFSGTHSGHWEKAIEAYQKGYVRRIIVTGGRSLTGTPH 79
Query: 75 ------SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
++ ++ + + + E I + NT N A + N V+ +
Sbjct: 80 PDWNGHTEAEVIIQHLMAGGIPEEVIKFENSSSNTLENVLFAKEIFDFNTVETVMFICKS 139
Query: 129 YH----MPRTFLELQRINSTVQFIPY---PIISH-DLEENSSIFKIKILRVLLIEYLKIL 180
H RT Q + +++IPY ++ +S + + EYL++L
Sbjct: 140 -HATGRQWRTLA--QHLPEHLRYIPYTFNAFYKDVEIGRDSWMSTEIGKSRVWGEYLRLL 196
>gi|329571446|gb|EGG53133.1| hypothetical protein HMPREF9520_02827 [Enterococcus faecalis
TX1467]
Length = 401
Score = 37.9 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 34/169 (20%)
Query: 5 WYGLFVCLIFFIMGFISFIRY----VKQMHIPDHPS--VSAIVVLTGE-----------P 47
W L + + FI+ + +F+ Y V ++ + P I VL
Sbjct: 180 WLSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIDVLGSGLINGEIVPPLLQ 239
Query: 48 IRIERAFELLENQI-----GEKIFISGVHHSVSKDIL------LQKIPIRQDLAECCIDI 96
RI +A + + Q KI +SG D L ++ + Q + + I +
Sbjct: 240 ARINKAIQFYKAQNRATLNPPKIVMSG---GQGPDELLPESVAMKMYALTQGIPDDDILV 296
Query: 97 GYKALNTEGNAQEASA-WAEKNNFHHV--LIVTHDYHMPRTFLELQRIN 142
+ NT N + + E + + T++YH+ R L +
Sbjct: 297 EAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAG 345
>gi|239627755|ref|ZP_04670786.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517901|gb|EEQ57767.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 37.9 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 47/169 (27%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFE 55
G+ + ++ F+ D ++ ++VL G R+++A E
Sbjct: 39 GVVALAVLCVLVFLGAASS-------DKKNLDYVIVL-GARVKEHTVSNSLKKRLDKAIE 90
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
E + +SG VS+ ++++ + + I ++++T N +
Sbjct: 91 YAEENPDTILVLSGGRGPGEDVSEAEVMRQYLEYNGVRPEQLLIEDRSVSTVENIAYSKV 150
Query: 113 WAEKNNFHH-------------------------VLIVTHDYHMPRTFL 136
E++ + ++T ++H+ R L
Sbjct: 151 VIEEHRNRDKKELVPLTRRTTSVPYAIAPDKPLEIGVLTSNFHIYRARL 199
>gi|289426184|ref|ZP_06427930.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289153349|gb|EFD02064.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|313791546|gb|EFS39664.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802367|gb|EFS43593.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313812480|gb|EFS50194.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313838950|gb|EFS76664.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314962443|gb|EFT06544.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|315077359|gb|EFT49419.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|327455232|gb|EGF01887.1| hypothetical protein HMPREF9584_01188 [Propionibacterium acnes
HL092PA1]
Length = 349
Score = 37.9 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%)
Query: 10 VCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVLTGE----------PIRIERAFELLE 58
+ L + GF+ ++ V + P IVVL R++R
Sbjct: 131 MALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLLASRLDRGIGQWR 190
Query: 59 ----NQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA- 110
I SG ++ + + + + C+ + +A NT+ N +
Sbjct: 191 TDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTDENISLSR 250
Query: 111 --------------SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + V++ T YH R +R V+ + P ++
Sbjct: 251 QVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLGAPTATYF 310
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLS 183
L +L EY+ +L
Sbjct: 311 LPSA-----------MLREYIALLASR 326
>gi|291529907|emb|CBK95492.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 262
Score = 37.9 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 18/165 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA---IVVL------TGEP---- 47
+RY + + + + I+ ++ ++ D P ++VL G
Sbjct: 71 VRYIFRAVLIIYGVLAVYAITLSAFMI-ANMNDAPEKDGSRTVIVLGCQVRRDGPSLMLR 129
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L +SG + +S+ + + + ++E I K+ +T
Sbjct: 130 RRLDAACSYLSADTKADCIVSGGKGDNEHISEAEAMYEALVNDGISENRITKEDKSSSTY 189
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + E + + IVT +H R L+ + + V+ +
Sbjct: 190 ENLLFSKQILEDSGKPLRIAIVTDGFHQWRARLQAESLGYDVKCV 234
>gi|153839788|ref|ZP_01992455.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260902700|ref|ZP_05911095.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|149746696|gb|EDM57684.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308108251|gb|EFO45791.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 212
Score = 37.9 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 19/120 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+R + H ++ ++V +G R L E E + + +
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDG--LFEKSEAE-----------TFADIARL 80
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR 140
+ D I + ++ N+ N + ++ +++V + R ++
Sbjct: 81 AGVPSDA----ILVETRSTNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEK 136
>gi|28897926|ref|NP_797531.1| hypothetical protein VP1152 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364389|ref|ZP_05777027.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260877083|ref|ZP_05889438.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260895744|ref|ZP_05904240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|28806140|dbj|BAC59415.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308088298|gb|EFO37993.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308093911|gb|EFO43606.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308115173|gb|EFO52713.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 212
Score = 37.9 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 19/120 (15%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+R + H ++ ++V +G R L E E + + +
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDG--LFEKSEAE-----------TFADIARL 80
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQR 140
+ D I + ++ N+ N + ++ +++V + R ++
Sbjct: 81 AGVPSDA----ILVETRSTNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEK 136
>gi|229032461|ref|ZP_04188429.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
gi|228728830|gb|EEL79838.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
Length = 344
Score = 37.5 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 23/152 (15%)
Query: 5 WYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
+ G+ + ++F + +F ++ Q + P I+VL RI +
Sbjct: 130 FAGISLITVYFFIHLSNFLSAYFLYQFNRPRRNQ-DFIIVLGSGLINDKVPPLLASRIHK 188
Query: 53 AFELLENQIG----EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
A + Q I SG + + +Q + + + +++NT
Sbjct: 189 AIDFYWKQAAVNTAPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQ 248
Query: 106 NAQEASAWA---EKNNFHHVLIVTHDYHMPRT 134
N + + H + T+++H+ R
Sbjct: 249 NMSFSKEIMDSLKPEGKHRSIFTTNNFHLFRA 280
>gi|221210650|ref|ZP_03583630.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD1]
gi|221169606|gb|EEE02073.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD1]
Length = 338
Score = 37.5 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQLGIRFDYIVVCSVTGSTQ-AGMIVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ ++I +D+G +
Sbjct: 227 TPARTREQITRIARHTAKLVDLGRDITD 254
>gi|150016976|ref|YP_001309230.1| hypothetical protein Cbei_2107 [Clostridium beijerinckii NCIMB
8052]
gi|149903441|gb|ABR34274.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 201
Score = 37.5 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 21/146 (14%)
Query: 51 ERAFELLENQIGEKIFISGVHHS-------------------VSKDILLQKIPIRQDLAE 91
E+A +L I SG + ++ ++ I I +
Sbjct: 40 EKASKLWLEGYAPYILPSGKYSMSKGYFPGPITKAEIYNGEYNTEWEFMRDIAISNGVNG 99
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I A T+ NA ++ + N +I +H R + +F
Sbjct: 100 DAILKEDNATWTKENAFKSKEVTDNYNLDIKKAIICCKSFHAKRCLMFYSYAYPKTKFFV 159
Query: 150 YPIISHDLEENSSIFKIKILRVLLIE 175
PI + + + + ++ E
Sbjct: 160 CPIDVDGITKENWFKTESGIDKVMGE 185
>gi|225872632|ref|YP_002754089.1| hypothetical protein ACP_0982 [Acidobacterium capsulatum ATCC
51196]
gi|225793427|gb|ACO33517.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length = 218
Score = 37.5 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFIS 68
++ D + + + G R++ A L + + + I+
Sbjct: 44 AWVYSQIRSYETHDEARPAGAIAVFGAAEYDGTPSPVLRARLDHALALYQEGLAP-LVIT 102
Query: 69 GVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
++ + + + + E I K+ +TE + + KN+ + +
Sbjct: 103 LGGRENGDTHTEGGVGRDYLMAHGVPEASIIAETKSDDTEESVARLAVIVRKNHIETLDV 162
Query: 125 VTHDYHMPR 133
V+ H+ R
Sbjct: 163 VSDGSHLFR 171
>gi|224283840|ref|ZP_03647162.1| hypothetical protein BbifN4_08441 [Bifidobacterium bifidum NCIMB
41171]
gi|313140995|ref|ZP_07803188.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133505|gb|EFR51122.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 145
Score = 37.5 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 14/97 (14%)
Query: 69 GVHHSVSKDILLQKI-PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHV---- 122
G VS+ +++ + + + + ++ T N + + + V
Sbjct: 18 GSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSGVQSVPGRR 77
Query: 123 ------LIVTHDYHMPRTFLELQRINSTVQFI--PYP 151
+VT DYH+ R I + PY
Sbjct: 78 GLAYRCALVTSDYHVFRASEYAHHIGPKADGVRQPYA 114
>gi|146329558|ref|YP_001208972.1| hypothetical protein DNO_0035 [Dichelobacter nodosus VCS1703A]
gi|146233028|gb|ABQ14006.1| conserved hypothetical membrane protein [Dichelobacter nodosus
VCS1703A]
Length = 223
Score = 37.5 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 11/111 (9%)
Query: 43 LTGEPI------RIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCI 94
LT RIE A +L +SG + S ++ ++ + + I
Sbjct: 64 LTDGRHNAFYDARIEAAAQLYHAGKARYFIVSGANPSRYYNEPEQMRLDLLAAGIPPAHI 123
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
Y T + + + LI++ +H R + +
Sbjct: 124 QADYAGFRTLDSILRMKKVFQNQRY---LIISQPFHNARAVFIARWHHHDA 171
>gi|167590630|ref|ZP_02383018.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia ubonensis
Bu]
Length = 338
Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQLGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ ++I +D+G +
Sbjct: 227 KPEQTREQITRIARHTAELVDLGRNITD 254
>gi|300775301|ref|ZP_07085163.1| SanA protein [Chryseobacterium gleum ATCC 35910]
gi|300506041|gb|EFK37177.1| SanA protein [Chryseobacterium gleum ATCC 35910]
Length = 214
Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI+ A +L ++ + I +SG + + ++ +Q I++ + + I + + T
Sbjct: 70 YNRIKAAADLYKSGKIQYIIVSGDNSTKDYNEPEDMQFALIQEGVPKDKIILDHAGFRTL 129
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A + ++I++ +H R
Sbjct: 130 DSVVRAKDIFSQ---TKLIIISQKFHNERAVF 158
>gi|167746797|ref|ZP_02418924.1| hypothetical protein ANACAC_01509 [Anaerostipes caccae DSM 14662]
gi|167653757|gb|EDR97886.1| hypothetical protein ANACAC_01509 [Anaerostipes caccae DSM 14662]
Length = 200
Score = 37.5 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 17/144 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---RIERAFELLENQIGEKIFISGVHHS 73
+ F ++ + +P + I+ R++ A L IG+ I ISG
Sbjct: 40 VFFCEALKKRDGILVPGALVKNGII----GAQLKDRLDGALRLYRASIGKFILISGTRKE 95
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
V ++ + + + + I + L+T + + T ++PR
Sbjct: 96 VK---FMKMYLLFRGIPQENIYEDREGLDTFRTMKNT---CSAFPGKSFYVCTQKLYVPR 149
Query: 134 TFLELQRINSTVQFIPYPIISHDL 157
T + + +IS +
Sbjct: 150 T----DYLAEAAGLNAHAVISDSV 169
>gi|146298194|ref|YP_001192785.1| hypothetical protein Fjoh_0430 [Flavobacterium johnsoniae UW101]
gi|146152612|gb|ABQ03466.1| protein of unknown function DUF218 [Flavobacterium johnsoniae
UW101]
Length = 219
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R++ L + + KI +SG + D L ++ Q + I + Y +T
Sbjct: 64 KDRLDAGIMLWKAKRINKILLSGDNGRDEYDELTVMKNYCYNQGVDTTKIFVDYAGFDTY 123
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + +++ +YH+ R
Sbjct: 124 STMYRAKHIFK---IKKATLISQEYHLNRAVY 152
>gi|300772477|ref|ZP_07082347.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
gi|300760780|gb|EFK57606.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
Length = 112
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+K + + + + I G + NT + + + + N ++++T D+HM R + +R
Sbjct: 11 RKYLVNKGIPDTAILDGPLSTNTVEDFKLSKELTSQLNPDILVVITSDFHMQRAGILYRR 70
Query: 141 INST--VQFIPYP 151
V F+P P
Sbjct: 71 FTDGSKVLFMPAP 83
>gi|405877|gb|AAA60509.1| yeiF [Escherichia coli]
gi|744182|prf||2014253AR yeiF gene
Length = 152
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 15/92 (16%)
Query: 49 RIERAFELLENQIGEKIFISGVH-------HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI+ A + + +SG + + L+ D I + Y
Sbjct: 69 RIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSD-----IVLDYAGF 123
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
T + + N+F +I+T +H R
Sbjct: 124 RTLDSIVRTRKVFDTNDF---IIITQRFHCER 152
>gi|261343423|ref|ZP_05971068.1| protein SanA [Providencia rustigianii DSM 4541]
gi|282568566|gb|EFB74101.1| protein SanA [Providencia rustigianii DSM 4541]
Length = 234
Score = 37.5 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI+ A + + + + +SG + H+ ++ I ++K I+ + I + + T
Sbjct: 68 NRIKGAADAYHSGKVKYLLLSGDNGAHNYNEPIAMRKDLIKAGVPASKIVLDFAGFRTLD 127
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + +NF I+T +H R + Q + P
Sbjct: 128 SVVRTKKVFDTDNFT---IITQRFHCERALFIAKHKGIDAQCLAVP 170
>gi|239980668|ref|ZP_04703192.1| hypothetical protein SalbJ_14585 [Streptomyces albus J1074]
gi|291452528|ref|ZP_06591918.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355477|gb|EFE82379.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 225
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 9/100 (9%)
Query: 55 ELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTEGNA 107
EL + + +G + + ++ + + E I + +A NT N
Sbjct: 54 ELYRAGLFSLLVFTGGNSPTTAARFPRGEAVHYREHALGLGVPEEAILLESRAGNTGHNI 113
Query: 108 QEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTV 145
+ + VL+V+ Y R + +++ V
Sbjct: 114 TYSRKVLAEAGVSPASVLLVSKPYMERRAYATARKLWPEV 153
>gi|114327106|ref|YP_744263.1| hypothetical protein GbCGDNIH1_0442 [Granulibacter bethesdensis
CGDNIH1]
gi|114315280|gb|ABI61340.1| hypothetical protein GbCGDNIH1_0442 [Granulibacter bethesdensis
CGDNIH1]
Length = 183
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 28/157 (17%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKI 83
R V+ H + + TG R H ++ +++++
Sbjct: 33 RRVEAAHALGQTIPDVLFMPTGGVGR----------------------HGPAEAEIMRRL 70
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH--VLIVTHDYHMPR--TFLELQ 139
+ +++ I + +T +A+ +A ++ H V + T YHM R T L L
Sbjct: 71 LLTLGVSDAAILMEPTGTDTLSSAKAVAALLREDGACHAPVFVATSRYHMGRCVTLLRLA 130
Query: 140 RINSTVQFIPYPIISHDLEE--NSSIFKIKILRVLLI 174
I ++ P S + + + + ++ +
Sbjct: 131 GIAASAGIAPDFRASGEWKWWLRDWLAWPYDVMLMTV 167
>gi|328952863|ref|YP_004370197.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
gi|328453187|gb|AEB09016.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
Length = 202
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
E + + +L+T +A+ + ++ +VT + HMPR +R +
Sbjct: 97 LEQRLILEEVSLSTVESARHTAVLLQQRGLMAAGLVTDELHMPRAAYLFRRSFRARRLTI 156
Query: 150 YPIISHDLEENSSIFK--IKILRVLLIEYLKILLLSIQLSLS 189
+ + L + + +++ + +L E + L + L
Sbjct: 157 RLLPARGLLVDYWQRRRYVRLTKFILREGGAWMKLWGRGILG 198
>gi|296110975|ref|YP_003621356.1| hypothetical protein LKI_04225 [Leuconostoc kimchii IMSNU 11154]
gi|295832506|gb|ADG40387.1| hypothetical protein LKI_04225 [Leuconostoc kimchii IMSNU 11154]
Length = 317
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 34/150 (22%)
Query: 11 CLIFFIMGFISFI-RYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFE--- 55
+++F+ FI F + H+ P +VVL G RI+ A +
Sbjct: 118 LMLYFVYQFIRFTMSSMVYKHVTKAPMTGPLVVLGGGLVDGYRVGNIVDQRIQAAVKDAR 177
Query: 56 --------LLENQIGEKIFISGVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTEGN 106
+ GE IS + +++ + + + ++ NT N
Sbjct: 178 RLPDYPIMVFSGGQGEDQLIS-------EAEAMRQWAVTTYGVPVKKTLLENQSHNTYQN 230
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ S + F T +YH+ R L
Sbjct: 231 LKLTSQLLKGKAFT---FYTSNYHVFRGVL 257
>gi|260802380|ref|XP_002596070.1| hypothetical protein BRAFLDRAFT_118064 [Branchiostoma floridae]
gi|229281324|gb|EEN52082.1| hypothetical protein BRAFLDRAFT_118064 [Branchiostoma floridae]
Length = 321
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 10/129 (7%)
Query: 38 SAIVVLTGEPIRIER-AFELLENQIGEKIFISG-VHHSVS------KDILLQKIPIRQDL 89
I+VL R+ A L + E + SG + H + + I + +
Sbjct: 124 DVILVLGCHDTRVAEYAARLWLDGWAEYLLFSGNLGHFTKGVWDRPEAEIFHDIAVSMGV 183
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQF 147
+ I A NT N + + ++ V++V Y RT+ + +
Sbjct: 184 PDDKILREPMATNTGENIKFSHRVLRQHKVKANSVILVQMPYMERRTYATFVKQWPGDKE 243
Query: 148 IPYPIISHD 156
+ +++
Sbjct: 244 NTHVVVTSP 252
>gi|293380584|ref|ZP_06626640.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|290922852|gb|EFD99798.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
Length = 367
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 26/161 (16%)
Query: 2 RYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGE----------- 46
R+ L + I +G + + V + +P ++VL
Sbjct: 139 RWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQDYLIVLGSGLINGDQVSKLL 198
Query: 47 PIRIERAF----ELLENQIGEKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + I I G +S+ + + + R+ ++ I +
Sbjct: 199 AARINRAIQYSNRQYQKGRKRPILIMSGGQGADKKISEALAMSRFAQRRGVSVDRILLED 258
Query: 99 KALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFL 136
++ NT N + A K N+ +++YH+ R L
Sbjct: 259 QSKNTYENMLFSKRIATKDFGNSHFRARFFSNNYHIFRAAL 299
>gi|261867930|ref|YP_003255852.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390202|ref|ZP_06634536.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413262|gb|ACX82633.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290950736|gb|EFE00855.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 237
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI--RQDLAECCIDIGYKALNTE 104
R+ A L E + + + +SG + ++ + + + + + I + + T
Sbjct: 83 YNRLLAAQRLFEARKVDYLLLSGDNRTLQYNEPRTMLQDLKKMGVPQEFIYLDFAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEEN 160
+ A + + + I++ +H R + I YP + +
Sbjct: 143 DSVIRADQVFKAH---SLTIISQKFHCERAL--FIAKFHNIDAICFAADYPQVYSFVRVR 197
Query: 161 SSIFKIKILRVLLIE 175
+++ + LL+E
Sbjct: 198 EFFARLQAVWDLLVE 212
>gi|163753469|ref|ZP_02160593.1| putative transport-related membrane protein [Kordia algicida OT-1]
gi|161327201|gb|EDP98526.1| putative transport-related membrane protein [Kordia algicida OT-1]
Length = 226
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI +L ++ + I +SG + S + D ++ I + E I + Y T +
Sbjct: 84 RINATVKLYKSGKIKYILVSGDNGSKTYDEPTTFKEDLIAAGIPENKIILDYAGFRTLDS 143
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ N I++ +H R
Sbjct: 144 VVRSKEIFQQENIT---IISQQFHNERAIA 170
>gi|317471600|ref|ZP_07930944.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316900915|gb|EFV22885.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 200
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 10/111 (9%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A L IG+ I ISG V ++ + + + + I + L+T
Sbjct: 69 KDRLDGALRLYRASIGKFILISGTRKEVK---FMKMYLLFRGIPQENIYEDREGLDTFRT 125
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
+ + T ++PRT + + +IS +
Sbjct: 126 MKNT---CSAFPGKSFYVCTQKLYVPRT----DYLAEAAGLNAHAVISDSV 169
>gi|256851299|ref|ZP_05556688.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN]
gi|260660723|ref|ZP_05861638.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN]
gi|282933256|ref|ZP_06338643.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1]
gi|256616361|gb|EEU21549.1| chromosome segregation protein SMC [Lactobacillus jensenii 27-2-CHN]
gi|260548445|gb|EEX24420.1| chromosome segregation protein SMC [Lactobacillus jensenii 115-3-CHN]
gi|281302760|gb|EFA94975.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1]
Length = 1189
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLAECC 93
+A +VLT +E E++ G+K+ +SG +++ LL I + C
Sbjct: 1057 NAKLVLTDSDNLLETGIEIIAQPPGKKLQKLSLLSGGERALTAITLLFAILQVNPVPFCI 1116
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+D AL+ + N + + + H +++TH
Sbjct: 1117 LDEVEAALD-DANVTRFAKFLHHYDMHTQFIVITHR 1151
>gi|297206168|ref|ZP_06923563.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16]
gi|297149294|gb|EFH29592.1| chromosome segregation protein Smc [Lactobacillus jensenii JV-V16]
Length = 1189
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLAECC 93
+A +VLT +E E++ G+K+ +SG +++ LL I + C
Sbjct: 1057 NAKLVLTDSDNLLETGIEIIAQPPGKKLQKLSLLSGGERALTAITLLFAILQVNPVPFCI 1116
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+D AL+ + N + + + H +++TH
Sbjct: 1117 LDEVEAALD-DANVTRFAKFLHHYDMHTQFIVITHR 1151
>gi|238854773|ref|ZP_04645103.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3]
gi|260664005|ref|ZP_05864858.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US]
gi|282933851|ref|ZP_06339199.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1]
gi|238832563|gb|EEQ24870.1| chromosome segregation protein SMC [Lactobacillus jensenii 269-3]
gi|260561891|gb|EEX27860.1| chromosome segregation protein SMC [Lactobacillus jensenii SJ-7A-US]
gi|281301940|gb|EFA94194.1| chromosome segregation protein SMC [Lactobacillus jensenii 208-1]
Length = 1189
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLAECC 93
+A +VLT +E E++ G+K+ +SG +++ LL I + C
Sbjct: 1057 NAKLVLTDSDNLLETGIEIIAQPPGKKLQKLSLLSGGERALTAITLLFAILQVNPVPFCI 1116
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+D AL+ + N + + + H +++TH
Sbjct: 1117 LDEVEAALD-DANVTRFAKFLHHYDMHTQFIVITHR 1151
>gi|213027332|ref|ZP_03341779.1| hypothetical protein Salmonelentericaenterica_35039 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 127
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 16/124 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEPI---------RI 50
+R + + + FI I+ ++ +Q AIV G R+
Sbjct: 7 LRIAAGIILIMAMVFIHNAIAIYQFSQQNQT---RVADCAIVAGAGVSGKTPSPVFQARL 63
Query: 51 ERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ A L + I + ++G + +VS + ++ + + + I I ++ T N
Sbjct: 64 DHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENI 123
Query: 108 QEAS 111
+ A
Sbjct: 124 RYAK 127
>gi|228916120|ref|ZP_04079690.1| hypothetical protein bthur0012_33360 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843318|gb|EEM88396.1| hypothetical protein bthur0012_33360 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 225
Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 19/177 (10%)
Query: 34 HPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPI 85
AI V G P + E +G +I ++G H S + L + I
Sbjct: 31 PQKCDAIFVFGGSHPGNWQAPLEAYRQGLGNRIIVTGGTSLHGMKHPSWNYGDLSEAEVI 90
Query: 86 RQDLAECCI-----DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
L E + +L++ N EA + + +L V R + L++
Sbjct: 91 VNKLMEHGVPKDAIMFETNSLHSIANVMEAKKIFDFTKVNRLLFVCKSLGAGRQYRVLKK 150
Query: 141 INS-TVQFIPYPIISH-----DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
T+ IPY + + + + K ++ EYL+ + + +
Sbjct: 151 HLPKTITCIPYTFDTSFDGKFIINRYNWMENEKSRSMIFGEYLRNVCYGRKGGIEPP 207
>gi|227878426|ref|ZP_03996366.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256849554|ref|ZP_05554986.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262046222|ref|ZP_06019185.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
gi|227861955|gb|EEJ69534.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256713670|gb|EEU28659.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573552|gb|EEX30109.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
Length = 361
Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 26/161 (16%)
Query: 2 RYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGE----------- 46
R+ L + I +G + + V + +P ++VL
Sbjct: 139 RWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQDYLIVLGSGLINGDQVSKLL 198
Query: 47 PIRIERAF----ELLENQIGEKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + I I G +S+ + + + R+ ++ I +
Sbjct: 199 AARINRAIQYSNRQYQKGRKRPILIMSGGQGADEKISEALAMSRFAQRRGVSVDRILLED 258
Query: 99 KALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFL 136
++ NT N + A K N+ +++YH+ R L
Sbjct: 259 QSKNTYENMLFSKRIATKDFGNSHFRARFFSNNYHIFRAAL 299
>gi|296110233|ref|YP_003620614.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295831764|gb|ADG39645.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 314
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 64 KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF- 119
K+ +SG + + ++ I +AE I + ++ NT N + EKN F
Sbjct: 179 KLIMSGGQGKDELLPEAEAMKAYAIMHGVAESDILVENQSKNTYQNMLFSKQVVEKNGFN 238
Query: 120 -HHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ T+DYH+ R + ++
Sbjct: 239 LQKGIFATNDYHVFRAAGFAHLVGLNIE 266
>gi|330960215|gb|EGH60475.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 338
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 9/89 (10%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVHH 72
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVRFADEVRQQEEELGFKFDYIVVCSVTGSTH---AGMLVGFAADGRAQRVI--GIDA 224
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
S D +++ +D+G +
Sbjct: 225 SAKPDKTREQVLRIAQNTARLVDLGREIT 253
>gi|256843883|ref|ZP_05549370.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|312984074|ref|ZP_07791422.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613788|gb|EEU18990.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|310894576|gb|EFQ43650.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 367
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 26/161 (16%)
Query: 2 RYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGE----------- 46
R+ L + I +G + + V + +P ++VL
Sbjct: 139 RWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQDYLIVLGSGLINGDQVSKLL 198
Query: 47 PIRIERAF----ELLENQIGEKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + I I G +S+ + + + R+ ++ I +
Sbjct: 199 AARINRAIQYSNRQYQKGRKRPILIMSGGQGADEKISEALAMSRFAQRRGVSVDRILLED 258
Query: 99 KALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFL 136
++ NT N + A K N+ +++YH+ R L
Sbjct: 259 QSKNTYENMLFSKRIATKDFGNSHFRARFFSNNYHIFRAAL 299
>gi|90414649|ref|ZP_01222621.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
gi|90324282|gb|EAS40854.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
Length = 343
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 22/96 (22%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
A++++TG L + ++ ++ + Q + + +
Sbjct: 202 ALIIVTGG---------LAKAGQ-------------TESSAMKTWLVEQGVNKDRVIEEN 239
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
KA NT NA+ + A K N +V+ H+ R+
Sbjct: 240 KATNTIDNARLSLALLNKYNIQAATLVSASIHVHRS 275
>gi|171915393|ref|ZP_02930863.1| predicted thioredoxin-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 263
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 48 IRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A LLE + + +SG ++ + ++ + + + + T
Sbjct: 103 ERVKSAQALLEAGKVQFLLVSG-DPDRDGCNEPLAMKAALVAGGVPADRVYCDFGGGRTL 161
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTF-LELQRINST-VQF-IPYPIISHDLEENS 161
+ A + + IV+H H R + +R V P ++ + S
Sbjct: 162 DSVVRAR---KVFGQRDMTIVSHGLHNERALYMARRRGLPDSVALNTPTDNLAPGWKVGS 218
Query: 162 SIFKIKILRVLLIE 175
+ + ++LIE
Sbjct: 219 YVKEAVARVLMLIE 232
>gi|295837325|ref|ZP_06824258.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826488|gb|EFG64899.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 223
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 14/127 (11%)
Query: 34 HPSVSAIVVLTGEPIRI---ERAFELLENQIGEKIFISGVHHSVSKDILLQ--KIPIRQD 88
+ A + L + A L + + +G + S + + + + +
Sbjct: 30 PRACDAAIAL--GCNDLGVSAHAAHLYRAGLFPVLVFTGGNSSDTLGVFPRGEAVHFHEH 87
Query: 89 LAECCI-----DIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRI 141
+ + KA NT N A + V +VT Y R F ++
Sbjct: 88 ALALGVPAHAMLLEPKAANTGQNIAFARETLTAADVRARSVPLVTMPYMERRAFATFRKQ 147
Query: 142 NSTVQFI 148
V+ +
Sbjct: 148 WPEVEVV 154
>gi|28870830|ref|NP_793449.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. tomato str. DC3000]
gi|301384067|ref|ZP_07232485.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. tomato Max13]
gi|302059856|ref|ZP_07251397.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. tomato K40]
gi|62286561|sp|Q87YW7|1A1D_PSESM RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|28854079|gb|AAO57144.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. tomato str. DC3000]
gi|330879824|gb|EGH13973.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
gi|330963269|gb|EGH63529.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|331015940|gb|EGH95996.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 338
Score = 37.1 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 9/89 (10%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVHH 72
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVRFADEVRQQEEELGFKFDYIVVCSVTGSTH---AGMLVGFAADGRAQRVI--GIDA 224
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
S D +++ +D+G +
Sbjct: 225 SAKPDKTREQVLRIAQNTAKLVDLGREIT 253
>gi|315612721|ref|ZP_07887632.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
gi|315314831|gb|EFU62872.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
Length = 340
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
++ L + F F F+ Y + + IP I++ L GE RI
Sbjct: 128 IIFFFLIYSYLIFGFAFAGFLLYSILYLFIPKKKYYDFIIIHGAGLLNGEKVTPLLKSRI 187
Query: 51 ERAFELLENQIGEKI-FIS----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A E + + IS G +S+ + + + D+ I + + T
Sbjct: 188 DKAVEAYHQSLNPNVKIISSGGQGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + EK L VT+DYH+ RT
Sbjct: 248 ENLLFSKEMGEKLVASPRFLFVTNDYHVFRT 278
>gi|315221559|ref|ZP_07863479.1| conserved hypothetical protein [Streptococcus anginosus F0211]
gi|315189393|gb|EFU23088.1| conserved hypothetical protein [Streptococcus anginosus F0211]
Length = 218
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 11/114 (9%)
Query: 49 RIE-RAFELLENQIGEKIFISGVHHSVSK-------DILLQKIPIRQDLAECCIDIGYKA 100
R+ A L + SG + ++K +I I + + I I K+
Sbjct: 37 RVANHAASLFLQGKAPFLVCSGGYGKITKSLWNNTEAETYAQICIENGVPKDKILIENKS 96
Query: 101 LNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQ-FIPYP 151
N+ N E N IV +Y R ++ V+ FI P
Sbjct: 97 TNSGENFNFTKKLLESRNIKVSTGTIVCKNYLSRRALATAKKQWPEVEWFIETP 150
>gi|162148717|ref|YP_001603178.1| hypothetical protein GDI_2945 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787294|emb|CAP56888.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 170
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 65 IFI-SGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+FI +G L+ + + + I + A +T + +A +
Sbjct: 42 LFIPTGGSPDGRPTEAALMADLLRAAGVPDRAIVVEDTARDTLDSVLACTALLRARGYRG 101
Query: 122 -VLIVTHDYHMPRTFLELQRIN 142
V + + YH+PR + +++
Sbjct: 102 PVAVASSAYHLPRCLVLMRQAG 123
>gi|149197614|ref|ZP_01874664.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
gi|149139184|gb|EDM27587.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
Length = 247
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 35/192 (18%)
Query: 23 IRYVKQMHIPDHPSVSA--IVVLTGEPI------------RIERAFELLENQIGEKI--- 65
R ++ + P + A I VL R R+ L+E +++
Sbjct: 62 ARPLEYQYPPSSNHLDAKYIAVLGSGHSSQKHWPDSLKLSRTARS-RLMEGLRQKQLNPE 120
Query: 66 --FIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
FI GV+ ++ + I + I + +T AQ A
Sbjct: 121 AKFIFFGFGVNGKQPHGEIMTQAAISLGVNPEDISFSVQPRDTNEEAQFAKEVC---GTE 177
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL------LI 174
+L+VT H PR + V P +++ ++ + L +
Sbjct: 178 KLLLVTDATHTPRAMKLFKSYGLNVFATP---ANYESYGDAWFVPMPSAEALELTRKSIY 234
Query: 175 EYLKILLLSIQL 186
EY+ ++ ++++
Sbjct: 235 EYVGLIWVNLKT 246
>gi|255592437|ref|XP_002535694.1| conserved hypothetical protein [Ricinus communis]
gi|223522259|gb|EEF26690.1| conserved hypothetical protein [Ricinus communis]
Length = 194
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 21/146 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGE-----PIR 49
+ + + L + L + I +++ A++V G R
Sbjct: 12 IAFTFIALSITLAALSLSAIGLNDHIE--------PADAVIVPGNTVNPDGTLSERLKGR 63
Query: 50 IERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ A E+ + + IF+SG + + +++ + + + I NT A
Sbjct: 64 LDAALEIFQAGGCKVIFVSGAVGAEGIDEAEAMRRYLLERGVDSQAIIQDSSGFNTAATA 123
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPR 133
A+ + + VL V+ +H+PR
Sbjct: 124 ANAALALHQRGYSKVLAVSQFFHVPR 149
>gi|120613126|ref|YP_972804.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax citrulli
AAC00-1]
gi|158513035|sp|A1TVP2|1A1D_ACIAC RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|120591590|gb|ABM35030.1| 1-aminocyclopropane-1-carboxylate deaminase [Acidovorax citrulli
AAC00-1]
Length = 338
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF++F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVAFAEEVRQQEEELGFQFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+++ +L+ +L +++G + +
Sbjct: 227 KPEQTREQILRIARNTAEL----VELGREITD 254
>gi|197284538|ref|YP_002150410.1| hypothetical protein PMI0641 [Proteus mirabilis HI4320]
gi|227356718|ref|ZP_03841104.1| membrane protein [Proteus mirabilis ATCC 29906]
gi|194682025|emb|CAR41516.1| putative transport protein [Proteus mirabilis HI4320]
gi|227163226|gb|EEI48157.1| membrane protein [Proteus mirabilis ATCC 29906]
Length = 241
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + +SG + HS ++ ++K I+ + I + + T +
Sbjct: 69 RIQGAVNAYNSGKVQYLLLSGDNAQHSYNEPNTMRKDLIKAGIPASRIVMDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ F I+T +H R + + + + S
Sbjct: 129 VVRTKEVFGTDGFT---IITQRFHCERAV--FIALEKGIDAQCFAVASPK 173
>gi|119488940|ref|XP_001262812.1| hypothetical protein NFIA_114480 [Neosartorya fischeri NRRL 181]
gi|119410970|gb|EAW20915.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 266
Score = 37.1 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRT 134
+ + + L+ C + I ++ N NA E E+N +LIV RT
Sbjct: 103 RVFTRCFDAPKILSSCRVLIEDRSTNCGANAIETKRLLEENGIRPESMLIVQDPTMSRRT 162
Query: 135 FLELQRINST---VQFIPYPIISHDLEENS 161
++ S ++F +P +
Sbjct: 163 VASFEKAFSEAGTLRFTSWPTFVPKVRLEG 192
>gi|327460113|gb|EGF06452.1| hypothetical protein HMPREF9378_1681 [Streptococcus sanguinis SK1]
gi|327488705|gb|EGF20505.1| hypothetical protein HMPREF9395_2307 [Streptococcus sanguinis
SK1058]
Length = 211
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 24/181 (13%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSV---- 74
ISF+ I + + V +G ERA E + +I ++G
Sbjct: 20 ISFLTKSVFGEIIEPQPCDVLFVFSGTHSGHWERAIEAYQKGYVRRIIVTGGRSLTGTPH 79
Query: 75 ------SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
++ ++ + + + E I + NT N A + N V+ +
Sbjct: 80 PDWNGHTEAEVIIQHLLAAGIPEEAIKSESSSSNTLENVLFAKEIFDFNTVETVMFICKS 139
Query: 129 YH----MPRTFLELQRINSTVQFIPY---PIISH-DLEENSSI-FKIKILRVLLIEYLKI 179
H RT Q + +++IPY ++ +S + I RV EYL++
Sbjct: 140 -HATGRQWRTLA--QHLPKHLRYIPYTFNAFYKDVEIGRDSWMNTDIGKSRVWG-EYLRL 195
Query: 180 L 180
L
Sbjct: 196 L 196
>gi|220935563|ref|YP_002514462.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996873|gb|ACL73475.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 250
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 35/182 (19%)
Query: 29 MHIPDHPSVSAIVVLTG-EPI----------------RIERAFELLENQIGEKIFISGVH 71
+ P + IVVL R+ A L + ++G
Sbjct: 67 PAPENMPELDHIVVLAAYGAHDPRVSVINQVNSHALIRLVEASLLAREHPEAILTVTGGG 126
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
L+ + I + E I + + NT +A A + F +VT HM
Sbjct: 127 E---VPKLMADVLIVLGVPESRIRVEALSSNTFESALHLQAELKDQRF---ALVTSAGHM 180
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR--------VLLIEYLKILLLS 183
R + + P P + L + + + + EY+ ++
Sbjct: 181 SRAMMVFR----GQGLEPIPAPTDYLSFADIWSAQIMAKPGNLLLSDLAIHEYIALVWYR 236
Query: 184 IQ 185
+
Sbjct: 237 WR 238
>gi|223986622|ref|ZP_03636616.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
gi|223961417|gb|EEF65935.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
Length = 363
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 18/113 (15%)
Query: 47 PIRIERAFELLENQIGEK-----------IFI-SGV---HHSVSKDILLQKIPIRQDLAE 91
R +RA Q +K I I SG ++ +++ + Q + E
Sbjct: 190 KQRCDRALAFYRRQEAKKTRFFPGRKKELILIPSGGQGPDEPRAEAEVMKDYLLEQGVPE 249
Query: 92 CCIDIGYKALNTEGNAQEASAWAE--KNNFHHVLIVTHDYHMPRTFLELQRIN 142
I + +++NT N + + K N+ + T DYH+ R L ++
Sbjct: 250 VRIRVENQSVNTYENMVFSKKIMDSMKKNYKCLFC-TSDYHVFRAGLLSRKAG 301
>gi|134100940|ref|YP_001106601.1| hypothetical protein SACE_4407 [Saccharopolyspora erythraea NRRL
2338]
gi|291003446|ref|ZP_06561419.1| hypothetical protein SeryN2_02872 [Saccharopolyspora erythraea NRRL
2338]
gi|133913563|emb|CAM03676.1| hypothetical membrane spanning protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 331
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 21/144 (14%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGE----------PIRIERAFELLE- 58
L + + F+ F+ Y H V IVVL R++RA E
Sbjct: 131 VLAYVSLLFVCFLLYSFVYGRIRHRRDVDFIVVLGSGLIGSRVPPLLAGRLDRARAAFEA 190
Query: 59 ---NQIGEKIFISGV-HHSVSKDILLQK--IPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ SG I Q + E I + ++ +TE N + + A
Sbjct: 191 EEAKGRRPVLVTSGGQGPGEDLPEARAMADYLIAQGVPEDRILVEDQSRSTEENLRFSKA 250
Query: 113 WAEKN--NFHHVLIVTHDYHMPRT 134
+ ++ + +VT+ +H+ R
Sbjct: 251 IMRERRPDYRCL-VVTNSFHVMRA 273
>gi|309782492|ref|ZP_07677216.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia sp.
5_7_47FAA]
gi|308918829|gb|EFP64502.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia sp.
5_7_47FAA]
Length = 338
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +K+ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADKVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
++ +L+ +L +D+G
Sbjct: 227 KPEQTRAQILRIAQHTAEL----VDLGRNIT 253
>gi|241663292|ref|YP_002981652.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia pickettii
12D]
gi|240865319|gb|ACS62980.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia pickettii
12D]
Length = 338
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +K+ G+
Sbjct: 170 LGFVGFAEEVRQQEAEMGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADKVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
++ +L+ +L +D+G
Sbjct: 227 KPEQTRAQILRIAQHTAEL----VDLGRNIT 253
>gi|312984415|ref|ZP_07791750.1| cell division protein Smc [Lactobacillus crispatus CTV-05]
gi|310894190|gb|EFQ43277.1| cell division protein Smc [Lactobacillus crispatus CTV-05]
Length = 1189
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLEN---QIGEKI-FISGVHHSVSKDILLQKIPIRQ 87
VV G R+E E++ + +++ +SG +++ LL +
Sbjct: 1051 VVFGGGKARLELTEPNNLLETGIEIIAQPPGKKQQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|295693171|ref|YP_003601781.1| chromosome segregation protein smc [Lactobacillus crispatus ST1]
gi|295031277|emb|CBL50756.1| Chromosome segregation protein Smc [Lactobacillus crispatus ST1]
Length = 1189
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLEN---QIGEKI-FISGVHHSVSKDILLQKIPIRQ 87
VV G R+E E++ + +++ +SG +++ LL +
Sbjct: 1051 VVFGGGKARLELTEPNNLLETGIEIIAQPPGKKQQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|293381177|ref|ZP_06627185.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus
214-1]
gi|290922217|gb|EFD99211.1| RecF/RecN/SMC N-terminal domain protein [Lactobacillus crispatus
214-1]
Length = 250
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLEN---QIGEKI-FISGVHHSVSKDILLQKIPIRQ 87
VV G R+E E++ + +++ +SG +++ LL +
Sbjct: 112 VVFGGGKARLELTEPNNLLETGIEIIAQPPGKKQQRLSLLSGGERALTAITLLFAMLQVN 171
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 172 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 212
>gi|227878859|ref|ZP_03996765.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01]
gi|256843376|ref|ZP_05548864.1| chromosome segregation protein SMC [Lactobacillus crispatus
125-2-CHN]
gi|256849802|ref|ZP_05555233.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US]
gi|262046953|ref|ZP_06019913.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US]
gi|227861550|gb|EEJ69163.1| chromosome segregation protein Smc [Lactobacillus crispatus JV-V01]
gi|256614796|gb|EEU19997.1| chromosome segregation protein SMC [Lactobacillus crispatus
125-2-CHN]
gi|256713291|gb|EEU28281.1| chromosome segregation protein Smc [Lactobacillus crispatus MV-1A-US]
gi|260572935|gb|EEX29495.1| chromosome segregation protein SMC [Lactobacillus crispatus MV-3A-US]
Length = 1189
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLEN---QIGEKI-FISGVHHSVSKDILLQKIPIRQ 87
VV G R+E E++ + +++ +SG +++ LL +
Sbjct: 1051 VVFGGGKARLELTEPNNLLETGIEIIAQPPGKKQQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|124006301|ref|ZP_01691136.1| SanA protein [Microscilla marina ATCC 23134]
gi|123988225|gb|EAY27883.1| SanA protein [Microscilla marina ATCC 23134]
Length = 218
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 49 RIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RIE A L + + + I +SG + + + + I + Y T
Sbjct: 74 RIEAAVALYKAKKIKYILVSGDNRFDYYNEPRE-MHNALVASGVPSEVIVLDYAGFRTLD 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + + I++ +H R
Sbjct: 133 SVVRSK---KVFGQQAITIISQPFHNKRALF 160
>gi|187929084|ref|YP_001899571.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia pickettii
12J]
gi|226706768|sp|B2UGM5|1A1D_RALPJ RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|187725974|gb|ACD27139.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia pickettii
12J]
Length = 338
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +K+ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADKVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
++ +L+ +L +D+G
Sbjct: 227 KPEQTRAQILRIAQHTAEL----VDLGRNIT 253
>gi|332525839|ref|ZP_08401980.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
gi|332109390|gb|EGJ10313.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
Length = 267
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 24/131 (18%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKI 65
++ +AIVVL R+ L + G +
Sbjct: 77 ALGADEVRALRDAPGTAIVVLGAGIYPEAPEYGAAVLKPLSAQRLRYGVWL-ARRTGLPL 135
Query: 66 FISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG S+ + ++ +T NA + A +
Sbjct: 136 AFSGGRGHHARSGPSEAEVAAATLAEDHGMVLR-WAETRSRDTHENAVHSVALLHEAGIT 194
Query: 121 HVLIVTHDYHM 131
+++VT+ +HM
Sbjct: 195 RIVLVTNGFHM 205
>gi|209520273|ref|ZP_03269041.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia sp. H160]
gi|209499302|gb|EDZ99389.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia sp. H160]
Length = 338
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
++I +++G
Sbjct: 227 KPAQTREQITRIARRTAGSVELGRDIT 253
>gi|153855830|ref|ZP_01996816.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
gi|149751871|gb|EDM61802.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
Length = 255
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A E L+ + +SG V++ + + + L I ++NT
Sbjct: 125 RLDCASEYLKEHPEVHVIVSGGQGKDEEVTEAYAMARYLECEGLDRRRIVQEDVSVNTLE 184
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + + V IV++++H+ R + +R + P P H L + +
Sbjct: 185 NLKFSRNLIADVD-TPVGIVSNNFHVYRGCVYAKRAGFK-EPFPIPASCHPLLFPNYFVR 242
Query: 166 --IKILRVLLIEY 176
+ ++ L +Y
Sbjct: 243 ECFAVWKLWLKKY 255
>gi|16800072|ref|NP_470340.1| hypothetical protein lin1003 [Listeria innocua Clip11262]
gi|16413462|emb|CAC96234.1| lin1003 [Listeria innocua Clip11262]
gi|313619596|gb|EFR91250.1| integral membrane protein [Listeria innocua FSL S4-378]
Length = 344
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 47 PIRIERAFELLENQI---GEK--IFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ RA E Q G++ +SG + +VS+ ++ I + + E I +
Sbjct: 184 ASRLNRAIAFYEKQYDKKGKRATFIVSGGQGANETVSEARAMRDYLISKGIDENFIIMED 243
Query: 99 KALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRIN 142
K++NT N Q + A + ++ + T+++H+ R L ++
Sbjct: 244 KSVNTLQNMQFSKAKMDAIMPTYNSLFS-TNNFHLFRAGLYARKAG 288
>gi|110638486|ref|YP_678695.1| hypothetical protein CHU_2090 [Cytophaga hutchinsonii ATCC 33406]
gi|110281167|gb|ABG59353.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 241
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A+ L I + + SG V+ + ++ ++ + + +A ++
Sbjct: 80 QHRVCWAWYLYSKGIVKNVIFSGGAVYTPYREAEIMAMYAVQLGIPAEHVFAEVQAEHST 139
Query: 105 GNAQEASAWAEKNNFHHVLIVT 126
N + A+ F+ V + T
Sbjct: 140 ENLYYSYEIAKAKGFNRVAVGT 161
>gi|313884387|ref|ZP_07818148.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620171|gb|EFR31599.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 236
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+++A+++ E K +SG H + + + ++ I + + I + + +T N
Sbjct: 78 RLDKAYQVFEEAPDRKFIMSGDHLQDNYNEVAVMKNYLIDKGIPANQIYLDHVGTSTY-N 136
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ +T +YH+ RT
Sbjct: 137 TIY--RLKHVLKIDKAIFITQNYHLSRTLY 164
>gi|152979392|ref|YP_001345021.1| hypothetical protein Asuc_1734 [Actinobacillus succinogenes 130Z]
gi|150841115|gb|ABR75086.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 247
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 27/97 (27%), Gaps = 15/97 (15%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHS-------VSKDILLQKIPIRQDLAECCIDIGYK 99
RI+ A L + + + +SG + + L + Q L Y
Sbjct: 90 ANRIQAADTLFKQGKIDYLLLSGDNRTLQYNEPRTMTRDLRKLGIADQFLFS-----DYA 144
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
T + A I+T +H R
Sbjct: 145 GFRTLDSIIRAKEVFRAEPMT---IITQRFHCERALF 178
>gi|288553093|ref|YP_003425028.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4]
gi|288544253|gb|ADC48136.1| chromosome segregation SMC protein [Bacillus pseudofirmus OF4]
Length = 1188
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 42 VLTGEPIRIERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLAECCIDIG 97
VLT +E E++ G+K+ +SG +++ LL I + + C +D
Sbjct: 1061 VLTSPENLLETGVEIMVRPPGKKLQHLGLLSGGERALTAIALLFAILKVRPVPFCVLDEV 1120
Query: 98 YKALNTEGNAQEASAWAEK-NNFHHVLIVTHD 128
AL+ E N + + + + +++TH
Sbjct: 1121 EAALD-EANVSRFAHYLKDFSGSTQFIVITHR 1151
>gi|331701646|ref|YP_004398605.1| hypothetical protein Lbuc_1288 [Lactobacillus buchneri NRRL
B-30929]
gi|329128989|gb|AEB73542.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 351
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 26/152 (17%)
Query: 8 LFVCLIFFIMGFISFIRY---VKQMHIPDHPSVSAIVVLTGE-----------PIRIERA 53
LI +I+ + + Q++ P I+VL RI +
Sbjct: 136 FLTMLIAYILLTVWNTLSSMLLYQLYFPRSNK-DYIIVLGAGLVDGHKVGRLLGGRINKG 194
Query: 54 FELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
QI K+ SG + + + ++ + I +++NT
Sbjct: 195 IAFYNQQIHRTNKRAKLVFSGGQGGDELLPESVAMRDYALEHGARGADTLIEDQSVNTFQ 254
Query: 106 NAQEASAWAEK---NNFHHVLIVTHDYHMPRT 134
N + + A +K + H ++ VT +YH R
Sbjct: 255 NMKFSKALIDKDAGSTNHRIVFVTSNYHTLRA 286
>gi|198076083|gb|ACH81537.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
caribensis]
Length = 261
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 11/90 (12%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVHH 72
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 155 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ---AGMIVGFAADGRADRVI--GIDA 209
Query: 73 SVSKDILLQK-IPIRQDLAECCIDIGYKAL 101
S + ++ I + AE +D+G
Sbjct: 210 STKPEHTREQITRIAKRTAEQ-VDLGRDIT 238
>gi|302134377|ref|ZP_07260367.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas syringae
pv. tomato NCPPB 1108]
Length = 338
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVHH 72
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVRFADEVRQQEEELGFKFDYIVVCSVTGSTH---AGMLVGFAADGRAQRVI--GIDA 224
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKA 100
S D +++ +D+G +
Sbjct: 225 SAKPDKTREQVLRIAQNTAKLVDLGREI 252
>gi|184201662|ref|YP_001855869.1| hypothetical protein KRH_20160 [Kocuria rhizophila DC2201]
gi|183581892|dbj|BAG30363.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 232
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 16/140 (11%)
Query: 18 GFISFI---RYVKQMHIPDHPSVSAIVVLTG--EPIRIERAFEL-LENQIGEKIFISGVH 71
G + + + A++VL G +P R+ A +L I + + S
Sbjct: 48 GTLWLAVCHAVLDSPRVDPPRRSDALLVL-GPPDPTRVAFAEDLVYNQHIADTVVFS--T 104
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKAL-------NTEGNAQEASAWAEKNNFHHVLI 124
+ + + C G + L T+G A + AE+ + V
Sbjct: 105 PDAQPFDPPEMVQYYTARSFCAPHEGVEVLCFKPDPSTTQGEAMKLRELAEQRGWKTVTA 164
Query: 125 VTHDYHMPRTFLELQRINST 144
VT H+PR+ L L+R
Sbjct: 165 VTFTQHVPRSRLILERCFPG 184
>gi|68535690|ref|YP_250395.1| putative secreted protein [Corynebacterium jeikeium K411]
gi|68263289|emb|CAI36777.1| putative secreted protein [Corynebacterium jeikeium K411]
Length = 213
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 21/152 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVL-----TGEP-----IR 49
++Y + L + F V D I VL G P R
Sbjct: 16 VKYVFITLLTIFLVAAGVFGVTAFQVWHFARSDDRRPADTIFVLGAAQYAGNPTNWFASR 75
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL-------N 102
+ A EL E + I G ++ L + ++ DI A+ +
Sbjct: 76 LNHAAELYEQGVAPTIVTVG---GKAEGDLYTEAAAGKNYLVENFDIPESAVVPVEEGAD 132
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T +A+ + A+ N + ++VT H R
Sbjct: 133 TLKSAEAFAQVADDNGWRTSVVVTDPAHSLRA 164
>gi|197284617|ref|YP_002150489.1| hypothetical protein PMI0723 [Proteus mirabilis HI4320]
gi|227356800|ref|ZP_03841185.1| integral membrane protein [Proteus mirabilis ATCC 29906]
gi|194682104|emb|CAR41690.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227163090|gb|EEI48025.1| integral membrane protein [Proteus mirabilis ATCC 29906]
Length = 276
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 39/127 (30%), Gaps = 25/127 (19%)
Query: 40 IVVLTGEPI-----------------RIERAFELLENQIGEKIFISG---VHHSVSKDIL 79
IVVL G R+ L + +G V+ S ++
Sbjct: 87 IVVLGGGFTYNPEWAPSANLLNNSLFRVAEGVRLYYRYPNASLIFTGGAGVNKISSAEVA 146
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT-FLEL 138
Q AE I + + +TE A E K F L+VT H+ R L
Sbjct: 147 AQVAQSLGVPAEKTIAL-SQPKDTEEEAYEVDKLIGKQPF---LLVTSANHLARAERFFL 202
Query: 139 QRINSTV 145
R +
Sbjct: 203 ARGMHPI 209
>gi|256830641|ref|YP_003159369.1| hypothetical protein Dbac_2878 [Desulfomicrobium baculatum DSM
4028]
gi|256579817|gb|ACU90953.1| protein of unknown function DUF218 [Desulfomicrobium baculatum DSM
4028]
Length = 260
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 7/141 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G + +SG S ++ + I + +AL+T
Sbjct: 117 RLNEGIRVANRFPGAILVLSGGKFKDEQSNAQVMAAAAVDLGFNPGRIMLSDQALDTHDE 176
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIF 164
A A A + F ++VT HM R E Q + Y
Sbjct: 177 AMRIKALAGSDLF---VLVTSASHMLRAVKLFENQGLKPIPAPTCYQSKGEPEYFLPRAD 233
Query: 165 KIKILRVLLIEYLKILLLSIQ 185
IK + + EYL + ++
Sbjct: 234 NIKTCHMAVHEYLGLAWSFVR 254
>gi|320352842|ref|YP_004194181.1| hypothetical protein Despr_0715 [Desulfobulbus propionicus DSM
2032]
gi|320121344|gb|ADW16890.1| protein of unknown function DUF218 [Desulfobulbus propionicus DSM
2032]
Length = 212
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEG 105
RI A L +KI +SG + + + + ++Q + E I + L T
Sbjct: 69 NRITAAVRLYRAGKCQKIIVSGDNRTHAYNEARDMKNDIVKQGVNERDIVCDFAGLRTLD 128
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + E N ++V+ +H R
Sbjct: 129 SI---VRFKEVFNQQKGIVVSQKFHNSRAIY 156
>gi|299069001|emb|CBJ40249.1| 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD)
[Ralstonia solanacearum CMR15]
Length = 338
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAE--CCIDIGYKALNTE 104
+++ +L+ L E I L+T
Sbjct: 227 KPEQTREQILRIARDTAKLVELGRDITADDVVLDTR 262
>gi|262275212|ref|ZP_06053022.1| hypothetical protein VHA_002194 [Grimontia hollisae CIP 101886]
gi|262220457|gb|EEY71772.1| hypothetical protein VHA_002194 [Grimontia hollisae CIP 101886]
Length = 194
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 21/140 (15%)
Query: 33 DHPSVSAIVVLTGEPIRIER-AFELLENQIGEKIFISGVHHSV-------SKDILLQKIP 84
D + VL +R+ A EL ++ + +SG ++ I
Sbjct: 4 DVKPADCLFVLCSNDLRVAEYAAELYRKELAPYLLVSGGRGRFTEYIFDKTEAETFADIL 63
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRTFLELQR-- 140
+ + I + KA N+ N + + + F ++V + R + +
Sbjct: 64 CDEGVPASAILLETKATNSGQNMTLSYNVMKDHGLVFSRFILVQKPFMERRAYATFMKQW 123
Query: 141 ---------INSTVQFIPYP 151
+ + F+ YP
Sbjct: 124 PGDIESVVCTSPPISFLDYP 143
>gi|113476034|ref|YP_722095.1| hypothetical protein Tery_2404 [Trichodesmium erythraeum IMS101]
gi|110167082|gb|ABG51622.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 226
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK-IFISGVHHSVSKDILLQKIPIR 86
++ V A +VL G I+ E + Q I IS +++
Sbjct: 30 SLNSAAKAPVDAYLVL-GGSIKREIYITQVAKQYPHIPILIS---AGSKDPCIVKLFQRE 85
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + + A +T N E+ H+ +VT H+PR
Sbjct: 86 NVPLDG-VWLEHCAKSTFSNFFFTMPILEEWGVQHIKLVTSPSHLPRA 132
>gi|302529491|ref|ZP_07281833.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438386|gb|EFL10202.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 197
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 19/179 (10%)
Query: 9 FVCLIFFIMGFISF-----IRYVKQMHIPDHPSVSAIVVL---TGEPI-------RIERA 53
F+ L + G+ + R + A+VVL G R+ A
Sbjct: 13 FLLLFVALFGWAEWEHWRSSRREMGGRPGTSGTGEAVVVLGYRNGGSRANFVNRWRVRAA 72
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ G + L R + + ++ +T N A
Sbjct: 73 VRSQAPDRSRLVLCGGAVGGPEPEASLMARYARAHGYRGPLVLETESRSTWENVLHAVPL 132
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
E + + IV+ H + L+R+ + + + + +L V+
Sbjct: 133 IEDAD--RIKIVSDSLHAEKARHYLRRLRPD--LAERLVPAREYRFGEWMAAKPVLAVM 187
>gi|54023435|ref|YP_117677.1| hypothetical protein nfa14680 [Nocardia farcinica IFM 10152]
gi|54014943|dbj|BAD56313.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 231
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 50/148 (33%), Gaps = 17/148 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
+R + + + G + V ++ D+ AIVVL G R
Sbjct: 30 IRRTVAAAVLMSMVLVGGTAVRVWQVARID--DYTPADAIVVL-GAAQYSGTPSSVFEAR 86
Query: 50 IERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+++A++L + ++ G ++ + + + I +T +
Sbjct: 87 LDQAYDLFRAGVAPRVITVGGKQEGDLYTEAASGKIYLEGRGVPTEAILAVETGSDTLRS 146
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + + ++V+ +H RT
Sbjct: 147 VEAVALAMKAREMSSAVLVSDPWHSLRT 174
>gi|198076063|gb|ACH81527.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
silvatlantica]
Length = 338
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 11/99 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH 71
F +GF+ F V+ IVV +TG + +++ G+
Sbjct: 167 FGGLGFVGFAEEVRAQEAQLGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GID 223
Query: 72 HSVSK----DILLQKIPIRQDLAECCIDIGYK--ALNTE 104
S + + + L + DIG K L+T
Sbjct: 224 ASATPQKTHAQITRIARHTAGLVDLNRDIGEKDVILDTR 262
>gi|212712140|ref|ZP_03320268.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
gi|212685187|gb|EEB44715.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
Length = 234
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + + + +SG + H+ ++ I ++K I+ + I + + T +
Sbjct: 69 RIKGAADAYHSGKVKYLLLSGDNGAHNYNEPIAMRKDLIKAGVPASKIVLDFAGFRTLDS 128
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ +NF I+T +H R + Q + P
Sbjct: 129 VVRTKKVFDTDNFT---IITQRFHCERALFIAKHKGIDAQCLAVP 170
>gi|237785081|ref|YP_002905786.1| iron ABC transporter permease [Corynebacterium kroppenstedtii DSM
44385]
gi|237757993|gb|ACR17243.1| iron ABC transport system, permease protein [Corynebacterium
kroppenstedtii DSM 44385]
Length = 363
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 18/45 (40%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIER 52
L VCL I G F + P P VV TG RIE+
Sbjct: 32 LLVCLALAIAGIFLFAVAIGIGDFPIAPMDVLSVVFTGGGSRIEQ 76
>gi|161521750|ref|YP_001585177.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans ATCC 17616]
gi|189352087|ref|YP_001947714.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans ATCC 17616]
gi|226706765|sp|A9AQJ3|1A1D_BURM1 RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|160345800|gb|ABX18885.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans ATCC 17616]
gi|189336109|dbj|BAG45178.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans ATCC 17616]
Length = 338
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQFGLRFDYIVVCSVTGSTQ-AGMIVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ ++I +D+G +
Sbjct: 227 TPARTREQITRIARHTAELVDLGRDITD 254
>gi|318040905|ref|ZP_07972861.1| hypothetical protein SCB01_04324 [Synechococcus sp. CB0101]
Length = 228
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 16/139 (11%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
A L + +++SG S ++ +L +P + + C A T NA
Sbjct: 105 AEAARQLNSNAVAVVYVSGHQPSTAQRLLRLGVPPERVAGDSC------ARTTWENATHT 158
Query: 111 SAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
S W +++ VL++T + +PR + P + + +
Sbjct: 159 SLWLQRHYPGAAVLLITDPWQLPRAARAFAH--QGLTVWPLAV-------EPRLSARERN 209
Query: 170 RVLLIEYLKILLLSIQLSL 188
R+ L E LL ++Q +
Sbjct: 210 RLALRETAGTLLYALQGRM 228
>gi|198076093|gb|ACH81542.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia unamae
MTI-641]
Length = 338
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + ++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRANRVI--GIDASA 226
Query: 75 SK----DILLQKIPIRQDLAECCIDIGYK--ALNTE 104
+ + + L + DIG + L+T
Sbjct: 227 TPEKTHAQITRIARHTAGLVDLSRDIGEQDVILDTR 262
>gi|227904214|ref|ZP_04022019.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC
4796]
gi|227868233|gb|EEJ75654.1| chromosome segregation protein Smc [Lactobacillus acidophilus ATCC
4796]
Length = 1189
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 VVFGGGKAKLELTEPDNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFAEFLLKYDMKTKFIVITHR 1151
>gi|58337572|ref|YP_194157.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM]
gi|58254889|gb|AAV43126.1| chromosome segregation protein Smc [Lactobacillus acidophilus NCFM]
Length = 1189
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 VVFGGGKAKLELTEPDNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFAEFLLKYDMKTKFIVITHR 1151
>gi|198076065|gb|ACH81528.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
silvatlantica SRMrh-20]
Length = 338
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 11/99 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH 71
F +GF+ F V+ IVV +TG + +++ G+
Sbjct: 167 FGGLGFVGFAEEVRAQEAQLGFKFDYIVVCPVTGSTQ-AGMVVGFAADGRADRVI--GID 223
Query: 72 HSVSK----DILLQKIPIRQDLAECCIDIGYK--ALNTE 104
S + + + L + DIG K L+T
Sbjct: 224 ASATPQKTHAQITRIARHTAGLVDLNRDIGEKDVILDTR 262
>gi|77164187|ref|YP_342712.1| hypothetical protein Noc_0663 [Nitrosococcus oceani ATCC 19707]
gi|76882501|gb|ABA57182.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
Length = 425
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
F+ + + F+ + Y K +P P + +L+G A +L+ +
Sbjct: 110 FLTTDLWALQFVGYGLYPKPSKVPKLPDGDCVTLLSGGLDSFVGAIDLVADGKAP 164
>gi|198076061|gb|ACH81526.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
silvatlantica]
Length = 338
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 11/99 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH 71
F +GF+ F V+ IVV +TG + +++ G+
Sbjct: 167 FGGLGFVGFAEEVRAQEAQLGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GID 223
Query: 72 HSVSK----DILLQKIPIRQDLAECCIDIGYK--ALNTE 104
S + + + L + DIG K L+T
Sbjct: 224 ASATPQKTHAQITRIARHTAGLVDLNRDIGEKDVILDTR 262
>gi|198076053|gb|ACH81522.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
caryophylli]
Length = 338
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDI-LLQKIPIRQDLAECCIDIGYKAL 101
+ + Q I + AE +D+G
Sbjct: 227 TPEKTHAQITRIARHTAE-LVDLGRNIT 253
>gi|323483771|ref|ZP_08089151.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323692744|ref|ZP_08106972.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
gi|323402962|gb|EGA95280.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323503186|gb|EGB19020.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
Length = 269
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 23/109 (21%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+++A E EN + +SG +S+ + + E + + +++NT
Sbjct: 117 RLDKALEYAENNPNTVLVLSGGKGEGEDISEAEAMYDYLQYNGIPESQLLLEEQSVNTVQ 176
Query: 106 N---------------AQEASA-WAEKNNFHH----VLIVTHDYHMPRT 134
N A EA + + ++T +YH+ R
Sbjct: 177 NIVFSKKVIDYQEKYKAMEARESLLDSYKERSDSVKIAVLTSNYHVFRA 225
>gi|237733730|ref|ZP_04564211.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383068|gb|EEO33159.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 255
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A E + I +SG ++++ ++ I + + E I K+ NT
Sbjct: 124 RLDAAVEYHQKFPDVPIIVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNE 183
Query: 106 NAQEASAWAEKNNFHH--VLIVTHDYHMPRTFL 136
N + E + V+I+T+ +H R+ L
Sbjct: 184 NIIYSKKIIETSTTEDYEVVIITNGFHCYRSKL 216
>gi|295693841|ref|YP_003602451.1| integral hypothetical protein [Lactobacillus crispatus ST1]
gi|295031947|emb|CBL51426.1| Integral membrane protein [Lactobacillus crispatus ST1]
Length = 367
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 26/161 (16%)
Query: 2 RYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGE----------- 46
R+ L + I +G + + V + +P ++VL
Sbjct: 139 RWLSLALASIPAIAIYLGLVLYNFLVNLLLYQIYPRTYHQDYLIVLGAGLINGDQVSKLL 198
Query: 47 PIRIERAF----ELLENQIGEKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + I I G +S+ + + + R+ ++ I +
Sbjct: 199 AARINRAIQYSNRQYQKGRKRPILIMSGGQGADEKISEALAMSRFAQRRGVSVDRILLED 258
Query: 99 KALNTEGNAQEASAWAEK---NNFHHVLIVTHDYHMPRTFL 136
++ NT N + A K N+ +++YH+ R L
Sbjct: 259 QSKNTYENMLFSKRIATKDFGNSHFKARFFSNNYHIFRAAL 299
>gi|322374753|ref|ZP_08049267.1| putative membrane protein [Streptococcus sp. C300]
gi|321280253|gb|EFX57292.1| putative membrane protein [Streptococcus sp. C300]
Length = 340
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
++ L + F F F+ Y + + IP I++ L GE RI
Sbjct: 128 IIFFFLIYSYLIFGFAFAGFLLYSILYLFIPKKKYYDFIIIHGAGLLNGEKVTPLLKSRI 187
Query: 51 ERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A E + + I G +S+ + + + D+ I + + T
Sbjct: 188 DKAVEAYHQSLNPNVKIIASGGQGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + EK L VT+DYH+ RT
Sbjct: 248 ENLLFSKEMGEKLVASPRFLFVTNDYHVFRT 278
>gi|311064772|ref|YP_003971497.1| hypothetical protein BBPR_1421 [Bifidobacterium bifidum PRL2010]
gi|310867091|gb|ADP36460.1| Conserved hypothetical membrane protein [Bifidobacterium bifidum
PRL2010]
Length = 93
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 12/78 (15%)
Query: 69 GVHHSVSKDILLQKI-PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHV---- 122
G VS+ +++ + + + + ++ T N + + + V
Sbjct: 9 GSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSGVQSVPGRR 68
Query: 123 ------LIVTHDYHMPRT 134
+VT DYH+ R
Sbjct: 69 GLAYRCALVTSDYHVFRA 86
>gi|213968885|ref|ZP_03397026.1| d cysteine desulfhydrase [Pseudomonas syringae pv. tomato T1]
gi|213926488|gb|EEB60042.1| d cysteine desulfhydrase [Pseudomonas syringae pv. tomato T1]
Length = 343
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ G+ S
Sbjct: 170 LGFVRFADEVRQQEEELGFKFDYIVVCSVTGSTH-AGMLVGFAADGRAQRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
D +++ +D+G +
Sbjct: 227 KPDKTREQVLRIAQNTAKLVDLGREIT 253
>gi|257785029|ref|YP_003180246.1| hypothetical protein Apar_1229 [Atopobium parvulum DSM 20469]
gi|257473536|gb|ACV51655.1| protein of unknown function DUF218 [Atopobium parvulum DSM 20469]
Length = 378
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 43/170 (25%)
Query: 6 YGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVV----LTGE------PIRIER 52
GLF+ + F ++ ++ +P + I++ L G RI +
Sbjct: 144 LGLFMLEGLWFSFTFVALLFYSWIYRI-LPRRRTYDYIIIHGAGLDGPRPTPLLAGRINK 202
Query: 53 AFELL-ENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A EL + K +SG VS+ ++ + +D+ I + K+ T N +
Sbjct: 203 ALELWNKQHQHGKFVVSGGQGADEVVSEAQAMRDYLLEKDVPLDAILMEDKSTTTWENLK 262
Query: 109 EAS-----AWAEKNNFHHV--------------------LIVTHDYHMPR 133
+ W N V +VT D+H+ R
Sbjct: 263 YSIGIINNDWTASANTTSVDTSASSGSFAASTIGTDFTTAVVTSDFHVFR 312
>gi|315185376|gb|EFU19149.1| short-chain dehydrogenase/reductase SDR [Spirochaeta thermophila
DSM 6578]
Length = 272
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECC 93
+VV+TG I +AF + G K+ I G V S + + +++ ++ C
Sbjct: 11 DEVVVITGGTGMIGKAFAVALAGSGAKVAIWGRGKTVPVEASVEEVKERLEGEGEVIGCA 70
Query: 94 IDIG 97
+D G
Sbjct: 71 VDTG 74
>gi|315634363|ref|ZP_07889650.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
gi|315476953|gb|EFU67698.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
Length = 240
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI--RQDLAECCIDIGYKALNTE 104
R+ A L E + + + +SG + ++ + + + + + I + + T
Sbjct: 83 YNRLLTAQRLFEKRKVDYLLLSGDNRTLQYNEPRTMLKDLKKMGVPQEFIYLDFAGFRTL 142
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ---FIP-YPIISHDLEEN 160
+ A + + + I++ +H R + F+ YP +
Sbjct: 143 DSVVRADQVFQAH---SLTIISQKFHCERAL--FIAKFHDIDAICFVADYPQGYTKVRVR 197
Query: 161 SSIFKIKILRVLLIE 175
+++ + LL+E
Sbjct: 198 EFFARLQAVWDLLME 212
>gi|257125972|ref|YP_003164086.1| hypothetical protein Lebu_1204 [Leptotrichia buccalis C-1013-b]
gi|257049911|gb|ACV39095.1| protein of unknown function DUF218 [Leptotrichia buccalis C-1013-b]
Length = 221
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI+ A E L+ K+ +G + +V++ + +++ ++ ++E I + K+ NT
Sbjct: 65 ERIKAATEYLKKNPEVKVIATGGQGKNENVAEGLAIKRELLKNGISEDRIVLEDKSKNTV 124
Query: 105 GNAQEASAWAE-------------KNNFHHVLIVTHDYHMPRT 134
N + + + KN VLIVT+DYH+ R+
Sbjct: 125 ENFRFSLEKIKNIENSKNILNNNKKNQKIKVLIVTNDYHVFRS 167
>gi|307718172|ref|YP_003873704.1| D-mannonate oxidoreductase [Spirochaeta thermophila DSM 6192]
gi|306531897|gb|ADN01431.1| D-mannonate oxidoreductase [Spirochaeta thermophila DSM 6192]
Length = 272
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECC 93
+VV+TG I +AF + G K+ I G V S + + +++ ++ C
Sbjct: 11 DEVVVITGGTGMIGKAFAVALAGSGAKVAIWGRGKTVPVEASVEEVKERLEGEGEVIGCA 70
Query: 94 IDIG 97
+D G
Sbjct: 71 VDTG 74
>gi|281206826|gb|EFA81010.1| putative syntaxin 10 [Polysphondylium pallidum PN500]
Length = 561
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 17/129 (13%)
Query: 6 YGLFVCLIFFIMGFISFI---RYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
GL + F + FI F + Q+ + P I++ TG I R LL G
Sbjct: 18 IGLLLVGAFAHLLFILFSPIFHIIGQLKLKQFPEPKTIII-TGASSGIGRELALLYAAKG 76
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG--NAQEASAWAEKNNFH 120
+ + ++G + + + ++ + E T G N E W + +
Sbjct: 77 KFLALTGRNQE-RLNEVAKQCRAKGATVE---------TTTIGVTNRSELEQWIDMIDKK 126
Query: 121 H-VLIVTHD 128
V +V +
Sbjct: 127 SNVDVVIAN 135
>gi|327183817|gb|AEA32264.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL
1118]
Length = 1189
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 VVFGGGKAKLELTEPNNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|325957094|ref|YP_004292506.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC]
gi|325333659|gb|ADZ07567.1| chromosome segregation protein SMC [Lactobacillus acidophilus 30SC]
Length = 1189
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 VVFGGGKAKLELTEPNNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|315038613|ref|YP_004032181.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL
1112]
gi|312276746|gb|ADQ59386.1| chromosome segregation protein SMC [Lactobacillus amylovorus GRL
1112]
Length = 1189
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
VV G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 VVFGGGKAKLELTEPNNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVTRFAQFLLKYDMKTQFIVITHR 1151
>gi|227892634|ref|ZP_04010439.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM
16047]
gi|227865566|gb|EEJ72987.1| chromosome segregation protein Smc [Lactobacillus ultunensis DSM
16047]
Length = 1189
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 41 VVLTGEPIRIE---------RAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQ 87
+V G ++E E++ G+K+ +SG +++ LL +
Sbjct: 1051 IVFGGGKAKLELTEPNNLLETGIEIIAQPPGKKLQRLSLLSGGERALTAITLLFAMLQVN 1110
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHD 128
+ C +D AL+ + N + + K + +++TH
Sbjct: 1111 PVPFCVLDEVEAALD-DANVARFAQFLLKYDLKTQFIVITHR 1151
>gi|293364947|ref|ZP_06611664.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307703198|ref|ZP_07640144.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316397|gb|EFE56833.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307623273|gb|EFO02264.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 340
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
++ L + F F F+ Y + + IP I++ L GE RI
Sbjct: 128 IIFFFLIYSYLIFGFAFAGFLLYSILYLFIPKKKYYDFIIIHGAGLLNGEKVTPLLKSRI 187
Query: 51 ERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A E + + I G +S+ + + + D+ I + + T
Sbjct: 188 DKAVEAYHQSLNPNVKIIASGGQGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + EK L VT+DYH+ RT
Sbjct: 248 ENLLFSKEMGEKLVASPRFLFVTNDYHVFRT 278
>gi|262403636|ref|ZP_06080194.1| hypothetical protein VOA_001624 [Vibrio sp. RC586]
gi|262350140|gb|EEY99275.1| hypothetical protein VOA_001624 [Vibrio sp. RC586]
Length = 286
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 50/171 (29%), Gaps = 44/171 (25%)
Query: 46 EPIRIE---RAFELLENQIGEKIFISGVHHSVSKDILL--------QKIPIRQDLAECCI 94
R++ A + EN +F G+ S Q + + +
Sbjct: 24 GKSRVDGLLSALQCHENSSALVVFCGGITAGQSVSEAQCMYEYFEQQIQQFGRSFPQVKV 83
Query: 95 DIGYKALNTEGNAQE-ASAWAEKNNFH-----HVLIVTHDYHMPRTFLELQRIN------ 142
+ ++ +T N + + +V++DYH+ R E+Q +
Sbjct: 84 LLEQQSTSTVENIEHVTQVLLASGELKAGAKLTLTLVSNDYHLKR-IFEIQHLMDEQGLL 142
Query: 143 ---------STVQF-----------IPYPIISHDLEENSSIFKIKILRVLL 173
S V +PYP S + ++ RV L
Sbjct: 143 RTLDQRCLRSGVTLDISRDLNHHLTVPYPHHSEQGRRFLWVDELTTYRVFL 193
>gi|238919197|ref|YP_002932712.1| hypothetical protein NT01EI_1280 [Edwardsiella ictaluri 93-146]
gi|238868766|gb|ACR68477.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 244
Score = 36.4 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 70 RIQGALNAYNSNKVSYLLLSGDNALQSYNEPVTMRRDLIAAGVPNGDIVLDYAGFRTLDS 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++F I+T +H R
Sbjct: 130 VVRTRRVFDTDDFT---IITQRFHCERALF 156
>gi|242803744|ref|XP_002484236.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717581|gb|EED17002.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 329
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 20/44 (45%)
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
G +F++G+H +++ + + D+ C I + + G
Sbjct: 71 GSNLFVTGIHPRLTEADISRLFEKYGDVESCSIMLDPHTKESRG 114
>gi|167754637|ref|ZP_02426764.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
gi|167705469|gb|EDS20048.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
Length = 209
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A E + I +SG ++++ ++ I + + E I K+ NT
Sbjct: 78 RLDAAVEYHQKFPDVPIIVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNE 137
Query: 106 NAQEASAWAE---KNNFHHVLIVTHDYHMPRTFL 136
N + E ++ V+I+T+ +H R+ L
Sbjct: 138 NIIYSKKIIETSPTEDYE-VVIITNGFHCYRSKL 170
>gi|238792388|ref|ZP_04636022.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
gi|238728314|gb|EEQ19834.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
Length = 255
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 51/196 (26%), Gaps = 30/196 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------- 48
W L + + + + + V IVVL G
Sbjct: 44 ALSWLVLLLISLQPVADRLLLPLEKPYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFA 103
Query: 49 ----RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG--YKALN 102
R+ L K+ +G + + + L DI + +
Sbjct: 104 NSLPRVTEGVRLYRAHPSAKMVFTGSAGPNKQSSAATAAQVAESLGVPVADIIALEQPKD 163
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----E 158
T A +A F L+VT H+PR + P P ++ L
Sbjct: 164 TVEEAAAVAALVGDKPF---LLVTSANHLPRAIKFFTA----IGLHPIPAPANQLAITTP 216
Query: 159 ENSSIFKIKILRVLLI 174
+S I L
Sbjct: 217 LHSWERAIPAAAWLGH 232
>gi|325528479|gb|EGD05602.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia sp.
TJI49]
Length = 338
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQLGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ + ++I +++G + +
Sbjct: 227 TPERTREQITRIARHTAALVELGREITD 254
>gi|317051465|ref|YP_004112581.1| short-chain dehydrogenase/reductase SDR [Desulfurispirillum indicum
S5]
gi|316946549|gb|ADU66025.1| short-chain dehydrogenase/reductase SDR [Desulfurispirillum indicum
S5]
Length = 246
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
P +AIV TG RI RA L + G ++ I+ +H+ + L + + Q +
Sbjct: 5 PPATAIV--TGASDRIGRAVALHLAKRGYRVAIT--YHTNREGALATQKLLEQYTPCTVL 60
Query: 95 DIGYKALNTEGNAQEASA 112
LN G+ E +
Sbjct: 61 CHDLATLNNPGDILEQAH 78
>gi|91840924|gb|ABE66299.1| 1-aminocyclopropane-1-carboxylic acid deaminase [Burkholderia
cepacia]
Length = 266
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH 71
F +GF+ F V+ IVV +TG + +++ G+
Sbjct: 130 FGGLGFVGFAEEVRAQEAQLGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GID 186
Query: 72 HSVSKD----ILLQKIPIRQDLAECCIDIGYKALN 102
S + D + + +L +++G +
Sbjct: 187 ASATPDKTHEQIARIARHTAEL----VELGRAITD 217
>gi|58039794|ref|YP_191758.1| hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
gi|58002208|gb|AAW61102.1| Hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
Length = 194
Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 47 PIRIERAFELLENQIGEKIFISG-VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNT 103
R+E L I +SG + +D ++ + +++ I + NT
Sbjct: 64 RERLEEGLRLWRAGFVRTIMVSGAIESGNHQDEARIMADWLMARNVPASAIIVDSHGNNT 123
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
A + + ++VT +H+ R+ L+R
Sbjct: 124 WLTALHVARL----HPEGAVVVTQWFHVLRSEWSLRRAG 158
>gi|15805223|ref|NP_293911.1| sanA protein [Deinococcus radiodurans R1]
gi|6457856|gb|AAF09774.1|AE001881_3 sanA protein [Deinococcus radiodurans R1]
Length = 222
Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + SVS D +++ + + + + + Y T +
Sbjct: 79 RIDAAEAAYKAGKVRVLLLSGDNSSVSYDEPTTMKEDLLERGIPAEQLVLDYAGFRTLDS 138
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A+ F +++ +H R
Sbjct: 139 VVRAAEVFGTRQFT---LISQPFHNERAIF 165
>gi|269138516|ref|YP_003295216.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|267984176|gb|ACY84005.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|304558537|gb|ADM41201.1| SanA [Edwardsiella tarda FL6-60]
Length = 244
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGN 106
RI+ A + + +SG + S + +++ I + I + Y T +
Sbjct: 70 RIQGALNAYNSNKVSYLLLSGDNALQSYNEPVTMRRDLIAAGVPNGDIVLDYAGFRTLDS 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
A + ++F I+T +H R
Sbjct: 130 IVRARRVFDTDDFT---IITQRFHCERALF 156
>gi|269793790|ref|YP_003313245.1| hypothetical protein Sked_04460 [Sanguibacter keddieii DSM 10542]
gi|269095975|gb|ACZ20411.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 216
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 50/161 (31%), Gaps = 19/161 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF--IRYVKQMHIPDHPSVSAIVVLTGEP----------- 47
MR + + + G + F R M+ D + + ++ G
Sbjct: 1 MRVGVGVVAGLTLLAVAGPVVFVQARAADHMYTADDVPATPVALVLGARVYDDGTPSQFL 60
Query: 48 -IRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A EL E + + G + +++ + Q + I +T
Sbjct: 61 RARLDLAVELYGAGSVEVLLVPGDGRPDHNDEPAAMRRYLVEQGVPAEAIIQDSAGFDTY 120
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ A + + +VT +H+ R + +
Sbjct: 121 DSCVRAD---KVYGVGALTVVTQSFHLARAVTTCRAVGVDA 158
>gi|306825708|ref|ZP_07459047.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432069|gb|EFM35046.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 340
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 19/151 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVV-----LTGEP------IRI 50
++ L + F F F+ Y + + IP I++ L GE RI
Sbjct: 128 IIFFFLIYSYLIFGFAFAGFLLYSILYLFIPKKKYYDFIIIHGAGLLNGEKVTPLLKSRI 187
Query: 51 ERAFELLENQIGEKIFIS-----GVHHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNTE 104
++A E + + I G +S+ + + + D+ I + + T
Sbjct: 188 DKAVEAYHQSLNPNVKIIASGGRGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTY 247
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRT 134
N + EK L VT+DYH+ RT
Sbjct: 248 ENLLFSKEMGEKLVASPRFLFVTNDYHVFRT 278
>gi|312194084|ref|YP_004014145.1| hypothetical protein FraEuI1c_0187 [Frankia sp. EuI1c]
gi|311225420|gb|ADP78275.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 234
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 6/106 (5%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
AIV+ G R F L + + +S + + +P + C
Sbjct: 96 TKADAIVMFDGIGGRKYTTFWLAGHGYAPVVAVS----TQDLTFCQKSLPTISGVQVFCF 151
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
T G A+ A ++ + V++VT R + ++R
Sbjct: 152 V--PTPATTRGEAEATERLATEHGWKKVIVVTGRPQETRARIRVER 195
>gi|24216823|ref|NP_714304.1| SanA-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45659108|ref|YP_003194.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24198192|gb|AAN51322.1| SanA-related protein [Leptospira interrogans serovar Lai str.
56601]
gi|45602354|gb|AAS71831.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 230
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAECCID-IGY 98
R++ A EL +KI +SG + S+ + +L+ +D+ +D G+
Sbjct: 73 KDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIF---VDHAGF 129
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L+T A+E ++ V+ + PR
Sbjct: 130 RTLDTLVRAKEIFQ------IQDLIFVSQRVYQPRAAF 161
>gi|261194785|ref|XP_002623797.1| beta-lactamase [Ajellomyces dermatitidis SLH14081]
gi|239588335|gb|EEQ70978.1| beta-lactamase [Ajellomyces dermatitidis SLH14081]
Length = 402
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL--- 186
H+P T E T + IP P+ + + + + F L EY+K+L ++
Sbjct: 226 HIPATKAESTARAPTGELIPTPVETQPIFKPADEFGGHGLWSTAAEYIKLLTSVLKDDGK 285
Query: 187 SLSTQTASQFF 197
LS+ T S F
Sbjct: 286 LLSSATLSILF 296
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Penicillium marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Penicillium marneffei
ATCC 18224]
Length = 341
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 20/44 (45%)
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
G +F++G+H +++ + + D+ C I + + G
Sbjct: 69 GSNLFVTGIHPRLTEADISRLFEKYGDVENCSIMLDPHTKESRG 112
>gi|221197442|ref|ZP_03570489.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD2M]
gi|221204115|ref|ZP_03577133.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD2]
gi|221176281|gb|EEE08710.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD2]
gi|221183996|gb|EEE16396.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
multivorans CGD2M]
Length = 338
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQLGIRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ ++I +D+G +
Sbjct: 227 TPARTREQITRIARHTAELVDLGRDMTD 254
>gi|198076091|gb|ACH81541.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia stabilis]
Length = 261
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH 71
F +GF+ F V+ IVV +TG + +++ G+
Sbjct: 152 FGGLGFVGFAEEVRAQEAQLGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GID 208
Query: 72 HSVSKD----ILLQKIPIRQDLAECCIDIGYKALN 102
S + D + + +L +++G +
Sbjct: 209 ASATPDKTHAQIARIARHTAEL----VELGRAITD 239
>gi|239613387|gb|EEQ90374.1| beta-lactamase [Ajellomyces dermatitidis ER-3]
gi|327351888|gb|EGE80745.1| beta-lactamase [Ajellomyces dermatitidis ATCC 18188]
Length = 402
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL--- 186
H+P T E T + IP P+ + + + + F L EY+K+L ++
Sbjct: 226 HIPATKAESTARAPTGELIPTPVETQPIFKPADEFGGHGLWSTAAEYIKLLTSVLKDDGK 285
Query: 187 SLSTQTASQFF 197
LS+ T S F
Sbjct: 286 LLSSATLSILF 296
>gi|258544135|ref|ZP_05704369.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
gi|258520643|gb|EEV89502.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
Length = 211
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
RI+ A L + +SG + S+S + ++ I + I Y L T
Sbjct: 63 RARIDAAAALYRGGKAQFFIVSGDNRSLSYNEPAQMRADLIAAGIPADHIQPDYAGLRTL 122
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ A ++ +IV+ +H R +
Sbjct: 123 DSVLRADKVFRLQDY---IIVSQAFHNARAVFLARH 155
>gi|262204162|ref|YP_003275370.1| hypothetical protein Gbro_4335 [Gordonia bronchialis DSM 43247]
gi|262087509|gb|ACY23477.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 189
Score = 36.0 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ L + +I SG + + D +++ ++ + I L+T+
Sbjct: 57 RGRLDTVLVLYHAKKITRIINSGNGSAEAGDEPAVMRAYLQQRGVPAGDIVDDPAGLDTD 116
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ + A +I+T D+H+ R + + +P
Sbjct: 117 ASCRRAHD---VFGVRRAVIITQDFHLRRAITLCRNLGVDATGVP 158
>gi|332162195|ref|YP_004298772.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666425|gb|ADZ43069.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862909|emb|CBX73045.1| uncharacterized protein ycbC [Yersinia enterocolitica W22703]
Length = 255
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 30/195 (15%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W L + + + + + + V IVVL G
Sbjct: 45 LSWLALLLISLQPVADRLLLPLEKQYATYQGNDPVDYIVVLGGGYTFNPNWAPSANLFAN 104
Query: 49 ---RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ L K+ +G +S S ++ + I + +T
Sbjct: 105 SLPRVTEGIRLYRAHPNAKMVFTGSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----EE 159
A +A F L+VT H+PR P P ++ L
Sbjct: 165 VEEAAAVAALVGDKPF---LLVTSASHLPRAIKFFTAKG----LHPIPAPANQLAITTPL 217
Query: 160 NSSIFKIKILRVLLI 174
+S I L
Sbjct: 218 HSWERTIPAAAYLGH 232
>gi|117619411|ref|YP_856904.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560818|gb|ABK37766.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 259
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 26/137 (18%)
Query: 23 IRYVKQMHIP----DHPSVSAIVVLTGEP-----------------IRIERAFELLENQI 61
R ++Q P HP + AIVVL R L +
Sbjct: 65 ARGLEQTFPPFEVSQHPDIEAIVVLGNGHVSDPAVPERSWQNNIALARTLEGVRLAQAYP 124
Query: 62 GEKIFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ SG +S + ++ + + + + +T EA + +
Sbjct: 125 QAELIFSGYVSGDPLSNAEVNARMAVSLGIPRSRMTLFENNKDTHD---EAVSISRHLKG 181
Query: 120 HHVLIVTHDYHMPRTFL 136
V +V+ H+PR
Sbjct: 182 KRVALVSSATHLPRAMA 198
>gi|319440596|ref|ZP_07989752.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length = 218
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 26/144 (18%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAFEL 56
+ + + G + D I+VL G R++ A +L
Sbjct: 28 VALVITLVTAGHVWAYARQD-----DRSEADTILVL-GAAQYNGTPSNWFAARLDHAADL 81
Query: 57 LENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
+ + +I G V+ + + + I +T +A+
Sbjct: 82 YNDGVAPRIVTVGGKLDGDVYTEAEAGE---RYLEDKGVPASDISTIVHGSDTLESAELF 138
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRT 134
A+K + V++VT H R
Sbjct: 139 GDEADKEGWGSVVVVTDPAHSLRA 162
>gi|295109560|emb|CBL23513.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 160
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ RA LE K +SG +S+ + + +A + ++ NT+
Sbjct: 28 ERVRRALLYLEENPDTKAVLSGGRGDGEQISEAEAMYRYLTEHGIAAERLIREEQSTNTK 87
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
N + H + +VT+++H+ R
Sbjct: 88 ENLDFSLRLIGSME-HSIGVVTNNFHVFR 115
>gi|118588233|ref|ZP_01545642.1| methyl-accepting chemotaxis protein [Stappia aggregata IAM 12614]
gi|118438939|gb|EAV45571.1| methyl-accepting chemotaxis protein [Stappia aggregata IAM 12614]
Length = 810
Score = 35.6 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 30/141 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R GL + ++ +GF + + + P V A+ L G R+E
Sbjct: 349 RMLATGLVLLVVAGAVGFFA----ARTITKPIGKVVDAMNRLAGGDTRVET--------- 395
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEK-- 116
+ D + E I + +A N ++ A+ E
Sbjct: 396 ---------DDAKRGDEIGDMFKAVAIFKENAIQRRHLEDQARNERDKERQRQAFLEGVI 446
Query: 117 NNFHHV---LIVTHDYHMPRT 134
N+F + + T M R
Sbjct: 447 NHFKSIMSERLATVSEQMDRM 467
>gi|239983590|ref|ZP_04706114.1| putative CoA transferase beta subunit [Streptomyces albus J1074]
gi|291455405|ref|ZP_06594795.1| glutaconate CoA-transferase [Streptomyces albus J1074]
gi|291358354|gb|EFE85256.1| glutaconate CoA-transferase [Streptomyces albus J1074]
Length = 270
Score = 35.6 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 22 FIRYVK--QMHIPDHPSVSAIVVLTGEPIRIERAFELLE-NQIGEKIFISGVHHSVSKDI 78
F + PD I L R+ LLE GE++ ++ VH V+ D
Sbjct: 170 FTAELDFCTSPGPDRALADGIRPLGSGVTRVVTDLGLLERAGAGEELRLTAVHPGVTVDQ 229
Query: 79 LLQKIP 84
+ +
Sbjct: 230 VREATG 235
>gi|297160305|gb|ADI10017.1| hypothetical protein SBI_06897 [Streptomyces bingchenggensis BCW-1]
Length = 230
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 32/153 (20%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
V TG R A E VH ++ I + E I + KA
Sbjct: 70 VFTGG--RNPTAPEWFPRGEA-------VH--------FREHAIALGVPEEAILLEPKAR 112
Query: 102 NTEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
NT N + VL+V+ Y R F +++ V+ I +S LE
Sbjct: 113 NTGQNITLSREVLAAAGITPETVLLVSMPYMERRAFATARKVWPEVEVI---CVSEPLEF 169
Query: 160 NSSIFKIKILRVL----------LIEYLKILLL 182
+ + I +++ +IEY K+
Sbjct: 170 DDYLKSIGDEKLVTDQLVGDLQRVIEYPKLGFA 202
>gi|311900820|dbj|BAJ33228.1| hypothetical protein KSE_74730 [Kitasatospora setae KM-6054]
Length = 230
Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 6/102 (5%)
Query: 49 RIERAFE-LLENQI-GEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ + + G ++ +SG H ++ L+ + + + ++ NT
Sbjct: 89 RVRAGIRSVPADGAPGTRLILSGGPTGHGTTEARLMADYATSVLGFDGAVLLEERSTNTW 148
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N E + + +V+ H + L+R +
Sbjct: 149 ENITHVIPLLEDAD--RIKLVSQPAHALKARAYLRRQRPDLA 188
>gi|307105797|gb|EFN54045.1| hypothetical protein CHLNCDRAFT_136117 [Chlorella variabilis]
Length = 363
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEAS-AWAEKNNFHHVLIVTHDYHMPR--TFLE 137
+ + + + ++ +T GN + A + + +VT ++HMPR +
Sbjct: 187 AAYLMGRGVPAGDLLKETQSCDTVGNGYFSLLQHALPAGWRRIAVVTSEFHMPRTQATFD 246
Query: 138 LQRINSTVQFIPYP 151
+ Q P
Sbjct: 247 FVYGLAGRQLHGDP 260
>gi|220923653|ref|YP_002498955.1| alcohol dehydrogenase GroES domain-containing protein
[Methylobacterium nodulans ORS 2060]
gi|219948260|gb|ACL58652.1| Alcohol dehydrogenase GroES domain protein [Methylobacterium
nodulans ORS 2060]
Length = 349
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
+VVL P I + G ++ ++G+ V + C+D+ +
Sbjct: 170 VVVL--GPGPIGLGIAWIAQGRGARVLLAGLDDGVRLATARRMG------IAQCVDLREE 221
Query: 100 AL 101
+L
Sbjct: 222 SL 223
>gi|17548867|ref|NP_522207.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia solanacearum
GMI1000]
gi|62286573|sp|Q8XS35|1A1D_RALSO RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|17431117|emb|CAD17797.1| probable 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase)
(accd) protein [Ralstonia solanacearum GMI1000]
Length = 338
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAEFGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
+ ++I +++G
Sbjct: 227 KPEQTREQILRIARDTAKLVELGRDIT 253
>gi|209545516|ref|YP_002277745.1| hypothetical protein Gdia_3404 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209533193|gb|ACI53130.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 170
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 65 IFI-SGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+FI +G L+ + + + I + A +T + +A
Sbjct: 42 LFIPTGGSPDGRPTEAALMADLLRAAGVPDRAIVVEDTARDTLDSVLACTALLRARGCRG 101
Query: 122 -VLIVTHDYHMPRTFLELQRIN 142
V + + YH+PR + +++
Sbjct: 102 PVAVASSAYHLPRCLVLMRQAG 123
>gi|255931757|ref|XP_002557435.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582054|emb|CAP80218.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 332
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 20/44 (45%)
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
G +F++G+H +++ + + D+ C I + + G
Sbjct: 67 GSNLFVTGIHPRLTESDISRLFEKYGDVENCSIMLDPHTKESRG 110
>gi|119510114|ref|ZP_01629253.1| hypothetical protein N9414_00620 [Nodularia spumigena CCY9414]
gi|119465175|gb|EAW46073.1| hypothetical protein N9414_00620 [Nodularia spumigena CCY9414]
Length = 224
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 25/176 (14%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK-IFI 67
CLI + G++ F + V A VL G IR E + + + I
Sbjct: 8 VFCLI--LAGWLIFT--TITLVWASSEPVDAFFVL-GGSIRREIYVAEATKKYPQIPVLI 62
Query: 68 SGVHHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
S + + ++ E C A +T N + H V
Sbjct: 63 S---SGSQLPCIWLIFQREAAELQNVWVENC------ANSTFENFYYGIPILRQWKVHKV 113
Query: 123 LIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLE---ENSSIFKIKILRVLL 173
++T H+PR ++ + + + E+ + + R L+
Sbjct: 114 TLITSPTHLPRAKWLAQILLGAHGIWVETDIVPEQGIPGNYESGWKTGLDVTRSLI 169
>gi|297154900|gb|ADI04612.1| hypothetical protein SBI_01491 [Streptomyces bingchenggensis
BCW-1]
Length = 121
Score = 35.6 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 19/67 (28%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
M +FW+ V ++F+ GF V+ T R ER +LLE
Sbjct: 1 MDWFWW---VLIVFWTGGFAWAADNVR----------------TALRNRHERKLQLLEAA 41
Query: 61 IGEKIFI 67
E++ I
Sbjct: 42 RQERLAI 48
>gi|198076069|gb|ACH81530.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia unamae]
Length = 338
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + ++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRANRVI--GIDASA 226
Query: 75 SK----DILLQKIPIRQDLAECCIDIGYK--ALNTE 104
+ + + L + DIG + L+T
Sbjct: 227 TPEKTHAQITRIARHTAGLVDLSRDIGEQDVTLDTR 262
>gi|266621742|ref|ZP_06114677.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288866566|gb|EFC98864.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 281
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 28/116 (24%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+++A + LE G + +SG VS+ ++ + ++E + + ++ +T
Sbjct: 122 KSRLDKAIDYLEENPGTVLVLSGGQGEDEPVSEAAAMRDYLVFNGVSERQLILETRSFST 181
Query: 104 EGNAQEASAWAEK-------NNFHH------------------VLIVTHDYHMPRT 134
N + E+ + + ++T D+H+ R
Sbjct: 182 VENIAYSRIAIEEDQAERKARHARSDIIMEPGTYEEISDKPIRIGVLTSDFHVFRA 237
>gi|300697259|ref|YP_003747920.1| 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD)
[Ralstonia solanacearum CFBP2957]
gi|299073983|emb|CBJ53520.1| 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD)
[Ralstonia solanacearum CFBP2957]
Length = 338
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 11/96 (11%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYK--ALNTE 104
+++ +L+ L E DI L+T
Sbjct: 227 KPGKTREQILRIARDTARLVELGRDIEEDDVVLDTR 262
>gi|229270297|gb|ACQ55296.1| ACC deaminase [Pseudomonas entomophila]
Length = 338
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + + + GV
Sbjct: 170 LGFVGFAEEVRQQEKELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRSKNVI--GVDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+K +L+ +L +++G +
Sbjct: 227 KPEQTKAQILRIARHTAEL----VELGREIT 253
>gi|182416855|ref|ZP_02948241.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668114|ref|ZP_04528098.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379317|gb|EDT76816.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656462|gb|EEP54018.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 202
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 23/159 (14%)
Query: 40 IVVLTGE--PIRIERAFELLENQIGEKIFISG-----VHHSVSKD--------------I 78
I+ + G P +E+A +L + I SG + +
Sbjct: 26 IIFVPGGLYPEPMEKACDLYLHGYAPYILPSGKFSMKFNGFTKPESKKDKYKKDYKTEFE 85
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFL 136
L+ + I + E + A T+ NA + +K +I +H R +
Sbjct: 86 FLKDVAIINGVPEEVVLKEDCATWTKQNAFNSKRVTDKLGLNVKKAIICCKSFHAKRCLM 145
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+FI P+ + + + ++ ++ E
Sbjct: 146 FYSWAYQNTKFIVCPVDVDGINKENWFKSEYGIQQVMGE 184
>gi|116265977|gb|ABJ91236.1| ACC deaminase [Pseudomonas putida]
Length = 338
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + + + GV
Sbjct: 170 LGFVGFAEEVRQQEKELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRSKNVI--GVDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+K +L+ +L +++G +
Sbjct: 227 KPEQTKAQILRIARHTAEL----VELGREIT 253
>gi|116265979|gb|ABJ91237.1| ACC deaminase [Pseudomonas sp. AT14]
Length = 338
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + + + GV
Sbjct: 170 LGFVGFAEEVRQQEKELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRSKNVI--GVDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+K +L+ +L +++G +
Sbjct: 227 KPEQTKAQILRIARHTAEL----VELGREIT 253
>gi|62286508|sp|Q5PWZ8|1A1D_PSEPU RecName: Full=1-aminocyclopropane-1-carboxylate deaminase;
Short=ACC deaminase; Short=ACCD
gi|56117728|gb|AAV73804.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas putida]
gi|296840678|gb|ADH59751.1| 1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas putida]
Length = 338
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + + + GV
Sbjct: 170 LGFVGFAEEVRQQEKELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRSKNVI--GVDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+K +L+ +L +++G +
Sbjct: 227 KPEQTKAQILRIARHTAEL----VELGREIT 253
>gi|295701334|ref|YP_003610335.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia sp.
CCGE1002]
gi|295441657|gb|ADG20824.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia sp.
CCGE1002]
Length = 338
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
++I +++G
Sbjct: 227 KPAQTREQITRIAKRTAESVELGRDIT 253
>gi|121533799|ref|ZP_01665626.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1]
gi|121307790|gb|EAX48705.1| chromosome segregation protein SMC [Thermosinus carboxydivorans Nor1]
Length = 1185
Score = 35.6 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 50 IERAFELLENQIGEKI----FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+ +++ G+K+ +SG +++ LL + C +D AL+ E
Sbjct: 1070 LNTGIDVIAQPPGKKLQNLALLSGGERALTVIALLFAFLTYRPSPFCVVDEIDAALD-EA 1128
Query: 106 NAQEASAWAEKN-NFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N Q S + ++VTH + +E I V
Sbjct: 1129 NVQRFSEFLRDYKGKTQFIVVTH----RKGTMEFADIMQGVT 1166
>gi|258655171|ref|YP_003204327.1| hypothetical protein Namu_5067 [Nakamurella multipartita DSM 44233]
gi|258558396|gb|ACV81338.1| hypothetical protein Namu_5067 [Nakamurella multipartita DSM 44233]
Length = 361
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 16/54 (29%)
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
G A T N Q+ E N + + + YH R L Y
Sbjct: 104 GQSAGITYKNKQQTVDIVENNGYDSIYLQDSAYHAQRPTSTLSHETQDQDGYQY 157
>gi|239833152|ref|ZP_04681481.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825419|gb|EEQ96987.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 227
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 9/119 (7%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG--VHHS-----VSKDILLQKIPIRQ 87
+ I+ L R+ ERA +L + + +G H + S+ +I IR+
Sbjct: 39 TADVIIGLGSYDPRVAERAADLFLEGMATWLVFTGKSGHWTEKLYKNSEAEAFAEIAIRR 98
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ E I I A N N + + ++VT R + R +
Sbjct: 99 GVPEKAITIEPNATNIGENIRFSREKLAPGAI-SAILVTKPQTQRRVLATVARQWPEAR 156
>gi|77918821|ref|YP_356636.1| inosine-5'-monophosphate dehydrogenase [Pelobacter carbinolicus DSM
2380]
gi|77544904|gb|ABA88466.1| inosine-5'-monophosphate dehydrogenase [Pelobacter carbinolicus DSM
2380]
Length = 491
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 15/95 (15%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+I +A E++E ISGV SK L+ + R E +D + T+ N
Sbjct: 105 EQKIYQALEVMEKYR-----ISGV-PITSKGKLVGILTNRDLRFETQLDQPIANVMTKEN 158
Query: 107 A---------QEASAWAEKNNFHHVLIVTHDYHMP 132
+EA K+ +L+V YH+
Sbjct: 159 LVTVPPGTTLEEAKYHLHKHRIEKLLVVDAQYHLK 193
>gi|116329953|ref|YP_799671.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123642|gb|ABJ74913.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 230
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAECCID-IGY 98
R++ A EL +KI +SG + S+ + +L+ +D+ +D G+
Sbjct: 73 KDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIF---VDHAGF 129
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L+T A+E ++ V+ + PR
Sbjct: 130 RTLDTLIRAKEIFQ------IKDLIFVSQKVYQPRAAF 161
>gi|116329443|ref|YP_799163.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122187|gb|ABJ80230.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 230
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAECCID-IGY 98
R++ A EL +KI +SG + S+ + +L+ +D+ +D G+
Sbjct: 73 KDRLDCALELYHQGKVKKILLSGDNGSIYYNEVKPMLLYILKNEVNEKDIF---VDHAGF 129
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L+T A+E ++ V+ + PR
Sbjct: 130 RTLDTLIRAKEIFQ------IKDLIFVSQKVYQPRAAF 161
>gi|300693537|ref|YP_003749510.1| 1-aminocyclopropane-1-carboxylate deaminase (acc deaminase) (accd)
[Ralstonia solanacearum PSI07]
gi|299075574|emb|CBJ34867.1| 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD)
[Ralstonia solanacearum PSI07]
Length = 338
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
+++ +L+ L +++G
Sbjct: 227 KPEKTREQILRIARNTAKL----VELGRDIT 253
>gi|189467152|ref|ZP_03015937.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
gi|189435416|gb|EDV04401.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
Length = 220
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI+ +L + E + ISG + ++ ++ + + + E I + Y T
Sbjct: 76 QNRIQATVDLYKAGKIEVVVISGDNSRKGYNEPEDMKSELMLRGIPEDKIYLDYAGFRTL 135
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + I++ +H R
Sbjct: 136 DS---VVRMEKIFGQKSFTIISQKFHNQRAIY 164
>gi|207724378|ref|YP_002254775.1| 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase) (accd)
protein [Ralstonia solanacearum MolK2]
gi|206589596|emb|CAQ36557.1| 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase) (accd)
protein [Ralstonia solanacearum MolK2]
Length = 338
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKA 100
+++ +L+ L +++G
Sbjct: 227 KPGKTREQILRIARDTARL----VELGRDI 252
>gi|83747298|ref|ZP_00944339.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia solanacearum
UW551]
gi|207739089|ref|YP_002257482.1| 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase) (accd)
protein [Ralstonia solanacearum IPO1609]
gi|83725998|gb|EAP73135.1| 1-aminocyclopropane-1-carboxylate deaminase [Ralstonia solanacearum
UW551]
gi|206592462|emb|CAQ59368.1| 1-aminocyclopropane-1-carboxylate deaminase (accdeaminase) (accd)
protein [Ralstonia solanacearum IPO1609]
Length = 338
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVH--- 71
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 72 -HSVSKDILLQKIPIRQDLAECCIDIGYKA 100
+++ +L+ L +++G
Sbjct: 227 KPGKTREQILRIARDTARL----VELGRDI 252
>gi|300865696|ref|ZP_07110462.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336292|emb|CBN55612.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 226
Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 103 TEGNAQEASAWAEKNNFH--HVLIVTHDYHMPRTFLELQRIN-STVQFIPYPIISHDLEE 159
T +A W ++ + I T H R+++ + + V+ + D E
Sbjct: 137 TTASAIALKDWLATSDLKVKSINIYTLGAHARRSWMLFKAVLSPEVEVGVIAGKAEDYEP 196
Query: 160 NSSIFKIKILRVLLIEYLKILLLSIQ 185
R ++ E + + S +
Sbjct: 197 QLWWNSSTGFRTVINEVIAYIYASFR 222
>gi|76667837|dbj|BAE45670.1| maturase K [Phalaenopsis deliciosa]
Length = 517
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 17/134 (12%)
Query: 55 ELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG------NAQ 108
L+ +K IS V+ S LL K + G+ + ++
Sbjct: 67 RLITRMYQQKYLISSVNDSNQNGFLLHKNSFSYHFYSQMVSEGFGVILEISFSSRLVSSF 126
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEE--NSSIFK 165
E + +N + + P +L +N + IPYPI L + I
Sbjct: 127 EEKRIPKSHNLRSIHSI-----FPFLEDKLSHLNYVSDLLIPYPIHMEILVQILQCWIKD 181
Query: 166 IKI---LRVLLIEY 176
+ LR++ EY
Sbjct: 182 VPSLHLLRLIFHEY 195
>gi|39933468|ref|NP_945744.1| alkaline phosphatase [Rhodopseudomonas palustris CGA009]
gi|39647314|emb|CAE25835.1| possible alkaline phosphatase [Rhodopseudomonas palustris CGA009]
Length = 585
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 94 IDIGYKALNTE--GNA-QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+D+ +T NA ++ WA+ +++V D++ P +
Sbjct: 389 LDMERAVYDTIMLDNAVRQTRDWAKARGDDTLILVVADHNHPNALV 434
>gi|192288827|ref|YP_001989432.1| Alkaline phosphatase [Rhodopseudomonas palustris TIE-1]
gi|192282576|gb|ACE98956.1| Alkaline phosphatase [Rhodopseudomonas palustris TIE-1]
Length = 585
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 94 IDIGYKALNTE--GNA-QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+D+ +T NA ++ WA+ +++V D++ P +
Sbjct: 389 LDMERAVYDTIMLDNAVRQTRDWAKARGDDTLILVVADHNHPNALV 434
>gi|198076067|gb|ACH81529.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
terricola]
Length = 338
Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q IVV +TG + E++ G+ S
Sbjct: 170 LGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQ-AGMVVGFAADGRAERVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
++I +++G +
Sbjct: 227 KPAQTREQIIRIAKQTAEKVELGRDITS 254
>gi|218281320|ref|ZP_03487808.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
gi|218217505|gb|EEC91043.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
Length = 179
Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R A + + + + + ISG + Q+ + + A NT N +
Sbjct: 51 RCNLAIKAYQQNLYDTLIISGSNVKNEFIEAKVMHAYIQNKMDIPTILETNARNTFENFK 110
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRT 134
+ +K + VLI+T H R
Sbjct: 111 FSKDIIQKQD---VLILTSQTHAKRA 133
>gi|302385322|ref|YP_003821144.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
gi|302195950|gb|ADL03521.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
Length = 274
Score = 35.2 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 42/162 (25%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL------TGEPI----RIERAFELLENQ 60
L+F ++ F+ F + D ++ ++VL TG R+++A E +
Sbjct: 73 ILVFMVVEFLVFTGVAAR----DASNLDYVIVLGARVKETGISKSLKKRLDKAIEYADEN 128
Query: 61 IGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +SG VS+ ++ + + E + + ++ +T N + E++
Sbjct: 129 PSVILVLSGGQGADEPVSEAAAMRDYLVFNGVNEEQLILETRSTSTVENIAYSRVAIEED 188
Query: 118 NFHH-------------------------VLIVTHDYHMPRT 134
+ ++T D+H+ R
Sbjct: 189 QAERKARRQNNPIFMEPGTFAEVPDKPIKIGVLTSDFHVYRA 230
>gi|332967832|gb|EGK06931.1| Cys regulon transcriptional activator CysB [Kingella kingae ATCC
23330]
Length = 315
Score = 35.2 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 27/138 (19%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI-SG---VHHSVS 75
+ + V + ++ + A+ T +P + + LLE+++G IFI SG V +V+
Sbjct: 6 LRYAVEVYRRNLNVSDAADAL--FTSQPG-VSKQIRLLEDELGVSIFIRSGKRIV--AVT 60
Query: 76 KDILLQKIPIRQ--DLAECCIDIGYKALNTEGNAQEAS---AWAEKNNFHHVLIVTHDYH 130
L Q LA+ +IG++ +T A + WA Y
Sbjct: 61 PAGLAVLEAAEQMLRLAQNIKNIGHEFTDTHSGALTIAATHHWAH-------------YQ 107
Query: 131 MPRTFLELQRINSTVQFI 148
+PR + + V+ I
Sbjct: 108 LPRMMPDFMQHYPDVRLI 125
>gi|295115532|emb|CBL36379.1| Uncharacterized conserved protein [butyrate-producing bacterium
SM4/1]
Length = 275
Score = 35.2 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++RA + EN + +SG +++ ++ + + E + + ++ NT
Sbjct: 117 RLDRAIDYAENNPNTFLVLSGGQGKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRE 176
Query: 106 NAQEASAWAEKN 117
N + +
Sbjct: 177 NIRYSLEVIRSQ 188
>gi|283796161|ref|ZP_06345314.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076380|gb|EFE13744.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|295092203|emb|CBK78310.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum
K10]
Length = 275
Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++RA + EN + +SG +++ ++ + + E + + ++ NT
Sbjct: 117 RLDRAIDYAENNPNTFLVLSGGQGKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRE 176
Query: 106 NAQEASAWAEKN 117
N + +
Sbjct: 177 NIRYSLEVIRSQ 188
>gi|254254879|ref|ZP_04948196.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia dolosa
AUO158]
gi|124899524|gb|EAY71367.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia dolosa
AUO158]
Length = 338
Score = 35.2 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+ IVV +TG + +++ G+ S
Sbjct: 170 LGFVGFAEEVRAQEAQLGFRFDYIVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 226
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALN 102
+ + ++I +D+G +
Sbjct: 227 TPERTREQITRIARHTAELVDLGRDIGD 254
>gi|294813532|ref|ZP_06772175.1| DUF218 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294326131|gb|EFG07774.1| DUF218 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 233
Score = 35.2 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 9/106 (8%)
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTE 104
A L + + SG + + ++ + + I + +A NT
Sbjct: 59 AAAGLYHAGLFPVVVFSGGNSPTTAARFPRGEAVHYREHARALGVPDAAILLEARAANTG 118
Query: 105 GNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + +L++ Y R + +++ +
Sbjct: 119 QNIAFSREVLSTAGTGVDSLLLIAKPYMERRAYATCRKLWPEADVV 164
>gi|254390034|ref|ZP_05005255.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326442061|ref|ZP_08216795.1| hypothetical protein SclaA2_13396 [Streptomyces clavuligerus ATCC
27064]
gi|197703742|gb|EDY49554.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 220
Score = 35.2 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 9/106 (8%)
Query: 52 RAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNTE 104
A L + + SG + + ++ + + I + +A NT
Sbjct: 46 AAAGLYHAGLFPVVVFSGGNSPTTAARFPRGEAVHYREHARALGVPDAAILLEARAANTG 105
Query: 105 GNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + +L++ Y R + +++ +
Sbjct: 106 QNIAFSREVLSTAGTGVDSLLLIAKPYMERRAYATCRKLWPEADVV 151
>gi|226307612|ref|YP_002767572.1| alcohol dehydrogenase [Rhodococcus erythropolis PR4]
gi|226186729|dbj|BAH34833.1| putative alcohol dehydrogenase [Rhodococcus erythropolis PR4]
Length = 276
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
+VV+TG I RA L G K+ IS V +V + +
Sbjct: 8 VVVITGAGSGIGRALALNLAGQGAKLAISDVD-TVGLAETARLVEA 52
>gi|89075875|ref|ZP_01162254.1| Rhs family protein [Photobacterium sp. SKA34]
gi|89048404|gb|EAR53981.1| Rhs family protein [Photobacterium sp. SKA34]
Length = 539
Score = 35.2 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 49 RIERAFELLENQIGEKIFISG-VHHSV-----------SKDILLQKIPIRQDLAECCIDI 96
R +RA+E+ ++ ++G + + L + + + + E I +
Sbjct: 58 RADRAYEVAKSLENPIYLLTGKGNPTTVQTCVIKGKSTEAQALKKILIEKHHVKENQIIL 117
Query: 97 GYKALNTEGNAQEASAWAEKN-----NFHHVLIVTHDYHMPR 133
+ T+ NA EA +K N + +V+ YH+ R
Sbjct: 118 EQNSTTTDENAIEAKIIIDKLKDKGVNINSYQLVSSHYHIFR 159
>gi|318606250|emb|CBY27748.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 255
Score = 34.8 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 52/195 (26%), Gaps = 30/195 (15%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
W L + + + + + + V I+VL G
Sbjct: 45 LSWLALLLISLQPVADRLLLPLEKQYATYQGNDPVDYIIVLGGGYTFNPNWAPSANLFAN 104
Query: 49 ---RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ L K+ +G +S S ++ + I + +T
Sbjct: 105 SLPRVTEGIRLYRAHPNAKMVFTGSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL----EE 159
A +A F L+VT H+PR P P ++ L
Sbjct: 165 VEEAAAVAALVGDKPF---LLVTSASHLPRAIKFFTAKG----LHPIPAPANQLAITTPL 217
Query: 160 NSSIFKIKILRVLLI 174
+S I L
Sbjct: 218 HSWERTIPAAAYLGH 232
>gi|311739886|ref|ZP_07713720.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304959|gb|EFQ81028.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 147
Score = 34.8 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+++A L G++I +SG + + I + + + + +A +T N
Sbjct: 22 RSRLDKALALYS---GQQIIVSG----RGEAGPMATYLIERGVPAERVVVEPEATSTNEN 74
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ A A H +VT+D+H+ RT L + VQ P
Sbjct: 75 LENAHRLAPDAVLH---VVTNDFHILRTALWAWHLGIAVQLHP 114
>gi|239918146|ref|YP_002957704.1| uncharacterized enzyme [Micrococcus luteus NCTC 2665]
gi|259585572|sp|C5CC09|CAAL_MICLC RecName: Full=Carboxylate-amine ligase Mlut_16620
gi|239839353|gb|ACS31150.1| uncharacterized enzyme [Micrococcus luteus NCTC 2665]
Length = 398
Score = 34.8 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
HP AI + R +R +L G ++ I GVH V D + + +P+ L
Sbjct: 105 HPFADAIAQPSTPSERYDRMLDL-TQYWGRQLLIFGVHVHVGLDDVSKAMPVVNGLVNRV 163
>gi|111221457|ref|YP_712251.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
gi|111148989|emb|CAJ60669.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
Length = 228
Score = 34.8 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 35 PSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
P+ +VVL G R++ A EL + + G ++
Sbjct: 58 PTSDTLVVL-GASQYDGRPSAVFAARLDHALELYRQGVAPNVITIGGKQPGDRYTEAEAG 116
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
R+ + + + + +T G+ + ++ ++VT H R+ +
Sbjct: 117 AAYLRRRGVPADRVIVVPEGSDTLGSLTAVAGVMNTRHWRSTVLVTDPPHSLRSRTMARD 176
Query: 141 INSTVQFIP 149
+ P
Sbjct: 177 LGLDATTSP 185
>gi|86144371|ref|ZP_01062703.1| hypothetical protein MED222_08178 [Vibrio sp. MED222]
gi|85837270|gb|EAQ55382.1| hypothetical protein MED222_08178 [Vibrio sp. MED222]
Length = 292
Score = 34.8 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 22/120 (18%)
Query: 46 EPIRIERAFELLENQIGEK-------IFISGV--HHSVSKDILLQKI------PIRQDLA 90
R++ E L + E+ F GV +VS+ ++ + +
Sbjct: 23 GISRVDALVEYLAGPLAEESNQQTAVAFCGGVTQGQTVSEADMMHEYFRELENQLEYPFP 82
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLI--VTHDYHMPRTFLELQRINST 144
+ + + NT N Q ++ ++ V + V++DYH+ R E+Q +
Sbjct: 83 IGAVLLEQHSTNTVENIQNLASEMIESGLFTRGQSVTVTFVSNDYHLQR-IFEIQSLMDE 141
>gi|170736607|ref|YP_001777867.1| Hpt sensor hybrid histidine kinase [Burkholderia cenocepacia MC0-3]
gi|254249296|ref|ZP_04942616.1| Signal transduction histidine kinase [Burkholderia cenocepacia
PC184]
gi|124875797|gb|EAY65787.1| Signal transduction histidine kinase [Burkholderia cenocepacia
PC184]
gi|169818795|gb|ACA93377.1| Hpt sensor hybrid histidine kinase [Burkholderia cenocepacia MC0-3]
Length = 1011
Score = 34.8 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 18/121 (14%)
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP--------RTFLELQRINSTVQ 146
+GY+A + + EA E++++ IV D +MP R E R +
Sbjct: 790 VLGYRA-DVASSVAEALDLVERHDY---AIVMTDLNMPGLDGYALARMLRERGRALPILA 845
Query: 147 FIPYPII-----SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ S + + + K LR L K + + AS +
Sbjct: 846 VTAHAEPDEMRLSKEAGIDEIVTKPTSLRSLEQAIAKYAGPW-RPGRAIPPASASTRGPL 904
Query: 202 E 202
Sbjct: 905 P 905
>gi|289706589|ref|ZP_06502939.1| uncharacterized enzyme [Micrococcus luteus SK58]
gi|289556724|gb|EFD50065.1| uncharacterized enzyme [Micrococcus luteus SK58]
Length = 401
Score = 34.8 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
HP AI + R +R +L G ++ I GVH V D + + +P+ L
Sbjct: 108 HPFADAIAQPSTPSERYDRMLDL-TQYWGRQLLIFGVHVHVGLDDVSKAMPVVNGLVNRV 166
>gi|224001440|ref|XP_002290392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973814|gb|EED92144.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 327
Score = 34.8 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 88 DLAECCIDIGYKALNTEGNAQEAS-AWAEKNNFHHVLIVTHDYHMPRT 134
L E + + + +T NA A ++ + + +L+VT+++H+ R+
Sbjct: 121 PLQEELVFVETTSYDTISNAFFARTSFTDVTGWRRLLVVTNEFHIHRS 168
>gi|198076087|gb|ACH81539.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
kururiensis]
gi|198076089|gb|ACH81540.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia
kururiensis]
Length = 261
Score = 34.8 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+GF+ F V+Q +VV +TG + +++ G+ S
Sbjct: 155 LGFVGFAEEVRQQEAELGFKFDYVVVCSVTGSTQ-AGMVVGFAADGRADRVI--GIDASA 211
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKAL 101
+ ++I +D+G
Sbjct: 212 KPEKTREQITRIAKQTAEAVDLGRDIT 238
>gi|186474772|ref|YP_001863743.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia phymatum
STM815]
gi|184198731|gb|ACC76693.1| 1-aminocyclopropane-1-carboxylate deaminase [Burkholderia phymatum
STM815]
Length = 338
Score = 34.8 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVV--LTGEPIRIERA--FELLENQIGEKIFISGVHH 72
+GF+ F V+Q IVV +TG + +++ G+
Sbjct: 170 LGFVGFAEEVRQQEAELGFRFDYIVVCSVTGSTQ---AGMIVGFAADGRADRVI--GIDA 224
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
S + ++I +D+G
Sbjct: 225 SAKSEQTREQITRIAKHTAERVDLGRDIT 253
>gi|316931622|ref|YP_004106604.1| alkaline phosphatase [Rhodopseudomonas palustris DX-1]
gi|315599336|gb|ADU41871.1| Alkaline phosphatase [Rhodopseudomonas palustris DX-1]
Length = 585
Score = 34.8 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 94 IDIGYKALNTE--GNA-QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+D+ +T NA ++ WA+ +++V D++ P +
Sbjct: 389 LDMERAVYDTIMLDNAVRQTRDWAKARGDDTLILVVADHNHPNALV 434
>gi|17229232|ref|NP_485780.1| hypothetical protein alr1740 [Nostoc sp. PCC 7120]
gi|17130830|dbj|BAB73439.1| alr1740 [Nostoc sp. PCC 7120]
Length = 132
Score = 34.8 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + A +T N ++ H V ++T H+PR
Sbjct: 7 VWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRA 47
>gi|220913850|ref|YP_002489159.1| LacI family transcriptional regulator [Arthrobacter
chlorophenolicus A6]
gi|219860728|gb|ACL41070.1| transcriptional regulator, LacI family [Arthrobacter
chlorophenolicus A6]
Length = 337
Score = 34.8 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--PIRIERAFELLENQIGEKIFI 67
V LI +G F V+ SA+++ R +L + Q + + I
Sbjct: 65 VGLIVLDVGNPFFTSVVRAAEDAASVHGSAVLLGDSGHDAGREANYIDLFQEQRVQGLLI 124
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCID 95
S V + LL++ + L + D
Sbjct: 125 SPVGDVTERLDLLRERGVPTVLVDRLAD 152
>gi|86747216|ref|YP_483712.1| alkaline phosphatase [Rhodopseudomonas palustris HaA2]
gi|86570244|gb|ABD04801.1| Alkaline phosphatase [Rhodopseudomonas palustris HaA2]
Length = 584
Score = 34.8 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 94 IDIGYKALNTE--GNA-QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+D+ +T NA ++ WA+ +++V D++ P +
Sbjct: 387 LDMERAVYDTIMLDNAVRQTRDWAKARGDDTLILVVADHNHPNALV 432
>gi|219120159|ref|XP_002180824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407540|gb|EEC47476.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 34.8 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 92 CCIDIGYKALNTEGNAQEAS----AWAEKNNFHHVLIVTHDYHMPRT 134
+ + + +T GNA A + +L+VT+++HM R+
Sbjct: 169 QNVFVETTSYDTIGNAFYARTSHTDIV---GWRKLLVVTNEFHMDRS 212
>gi|167750336|ref|ZP_02422463.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
gi|167656696|gb|EDS00826.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
Length = 234
Score = 34.8 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 18/165 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA---IVVL------TGEP---- 47
+RY + + + + I+ ++ ++ D P ++VL G
Sbjct: 43 VRYIFRAVLIIYGVLAVYAITLSAFMI-ANMNDAPEKDGSRTVIVLGCQVRRDGPSLMLR 101
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L +SG + +S+ + + + ++E I K+ +T
Sbjct: 102 RRLDAACSYLSTDTKADCIVSGGKGDNEHISEAEAMYEALVNDGISESRISKEDKSSSTY 161
Query: 105 GNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFI 148
N + E + + IVT +H R L+ + + V+ +
Sbjct: 162 ENLLFSKQILEDSGKPLRIAIVTDGFHQWRARLQAESLGYDVKCV 206
>gi|254519553|ref|ZP_05131609.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226913302|gb|EEH98503.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 63 EKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-- 117
KI +SG +S+ ++K + + E I + K+ +T N + A E
Sbjct: 133 SKIIVSGGQGRGEDISEAQAMKKYLVNNGIKEELIIMENKSTSTNENLIFSKAIIESYTK 192
Query: 118 ---NFHHVLIVTHDYHMPRT 134
++ I+T D+H R+
Sbjct: 193 SDIGDINIKIITSDFHAFRS 212
>gi|153008144|ref|YP_001369359.1| hypothetical protein Oant_0808 [Ochrobactrum anthropi ATCC 49188]
gi|151560032|gb|ABS13530.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 212
Score = 34.8 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG-----VHH--SVSKDILLQKIPIRQ 87
+ I+ L R+ ERA +L + + +G S+ +I IR+
Sbjct: 24 TADVIIGLGSYDPRVAERAADLFLAGMATWLVFTGKSGHWTDRLYKASEAEAFAEIAIRR 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ E I I A N N + + ++VT
Sbjct: 84 GVPEEAITIEPNATNIGENIRFSRERLAPGAI-SAILVT 121
>gi|170782607|ref|YP_001710941.1| hypothetical protein CMS_2267 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157177|emb|CAQ02358.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 194
Score = 34.8 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 14/143 (9%)
Query: 30 HIPDHP-SVSAIVVLTGEPI--RIERAFELLENQIGEKIFISGVHHS--VSKDILLQKIP 84
P I V+ G P R + A +L++ + + S V + S L
Sbjct: 44 PPASQPDKADVIYVI-GPPNPTRRDLAAKLVDEGYSDTVVFS-VPPTGPQSAAELAACQG 101
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS- 143
C + T+G A+ +E+N + +++T H+ RT L R +
Sbjct: 102 EFPYPVTCDTPSPF---TTQGEARYLKEKSEENGWKSAIVITWTPHVTRTQLIFSRCFTG 158
Query: 144 TVQFIPYPIISHDLEENSSIFKI 166
+ + P+ D + +
Sbjct: 159 DLMVVEDPV---DFSLRQWVSQY 178
>gi|149911645|ref|ZP_01900255.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
gi|149805269|gb|EDM65284.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
Length = 251
Score = 34.8 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R + + K+ SG S + ++ + + + I + + +T
Sbjct: 106 RTTEGVRIYKLNPTAKLIFSGYSGGDINSNAKMNARLAMALGVPKSAILLLEQPKDTIEE 165
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A + + +++VT HMPR
Sbjct: 166 AIDNKKITQGKQ---LVLVTSATHMPRAM 191
>gi|290954919|ref|YP_003486101.1| GdmH-like transporter [Streptomyces scabiei 87.22]
gi|260644445|emb|CBG67530.1| GdmH-like transport-associated protein [Streptomyces scabiei 87.22]
Length = 202
Score = 34.8 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 53/201 (26%), Gaps = 31/201 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS---FIRYVKQMHIPDHPSVSAIVVLTGEPI--------- 48
MR + + + G + R + A+VVL G
Sbjct: 1 MRRGTGLVTAGVAALVWGEWLNWRWSRTLVGSTGQSGSGTEAVVVL-GYRNPGPTVNPIN 59
Query: 49 --RIERAFELLEN--QIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALN 102
R+ + + SG S + L+ + + + ++
Sbjct: 60 RWRVRAGIRSVAADGGRATVVIFSGGATGSSAAEAELMADYAQSVLGFDGTVLLEGRSTT 119
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T N E + + IV+ H + L+R + + D
Sbjct: 120 TWENITNVIPLLE--DVDRIKIVSQPAHALKARAYLRRQRPD--LAARLVRAEDYRLGEW 175
Query: 163 --------IFKIKILRVLLIE 175
++ + LR L E
Sbjct: 176 TMGKPLLALYGFRTLRRLTAE 196
>gi|313238603|emb|CBY19990.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 34.8 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 94 IDIGYKALNTEGNAQEASAWAE---KNNFHHVL-IVTHDYHMPRTFLELQRINST 144
I + KA NT N Q K+NF V+ IVT DYH RTF +
Sbjct: 16 IVLENKARNTVQNFQYGFEIIAQLCKSNFAVVVTIVTSDYHAARTFYVAHSVLRN 70
>gi|328955453|ref|YP_004372786.1| hypothetical protein Corgl_0858 [Coriobacterium glomerans PW2]
gi|328455777|gb|AEB06971.1| hypothetical protein Corgl_0858 [Coriobacterium glomerans PW2]
Length = 310
Score = 34.8 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
G I + + + AI+V++G +E A ++ I+G V+
Sbjct: 54 GGIVRVARLGDRNAAPRSDTDAIIVVSGGSEGLEDAV--------RRLVITGAPVVVAAR 105
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-SAWAEKN 117
+ IR+D +G A + + E + W +
Sbjct: 106 SASEVPFIREDTPA----LGLVASDDREHLLEGLAHWILER 142
>gi|312198227|ref|YP_004018288.1| thiamine pyrophosphate TPP-binding domain-containing protein
[Frankia sp. EuI1c]
gi|311229563|gb|ADP82418.1| thiamine pyrophosphate TPP-binding domain-containing protein
[Frankia sp. EuI1c]
Length = 568
Score = 34.8 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIR 86
+ PS +V T P RI A L+ + I GVH + ++ +
Sbjct: 172 DVPPALPPSAYRLVDQTAGPDRIAEAVRLIGAATQPVLLIGHGVH-TARAAESVKAL--- 227
Query: 87 QDLAECCI 94
DL C +
Sbjct: 228 ADLMACPV 235
>gi|85859456|ref|YP_461658.1| inosine-5'-monophosphate dehydrogenase [Syntrophus aciditrophicus
SB]
gi|85722547|gb|ABC77490.1| Inosine-5'-monophosphate dehydrogenase [Syntrophus aciditrophicus
SB]
Length = 486
Score = 34.8 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 15/95 (15%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A +L+ ISGV V L+ + R E + + T N
Sbjct: 104 EQKVSEALDLMHRYK-----ISGV-PVVKNKKLVGILTNRDLRFEENLHQPVSNVMTREN 157
Query: 107 A---------QEASAWAEKNNFHHVLIVTHDYHMP 132
+E+ K+ +L+V Y++
Sbjct: 158 LVTVSANISLEESKRLLHKHRIEKLLVVDESYNLK 192
>gi|257069902|ref|YP_003156157.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
gi|256560720|gb|ACU86567.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
Length = 345
Score = 34.8 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 55 ELLENQIGEKIFISGVHHSVSKDILLQKIPI-RQDLAECCIDIGYKALNTEGNAQEASAW 113
LL ++G + +GV + +P+ E D+ + + GNA + +
Sbjct: 125 RLLGMRVGGLLVATGVVRTADIKQFTSVLPVVSVGRPESDPDVYGVSYDEIGNATQLAHA 184
Query: 114 AEKNNFHHVLIVT 126
+ + +V+
Sbjct: 185 VHDHGHRRIAVVS 197
>gi|126436056|ref|YP_001071747.1| acyl transferase domain-containing protein [Mycobacterium sp. JLS]
gi|126235856|gb|ABN99256.1| acyl transferase domain protein [Mycobacterium sp. JLS]
Length = 978
Score = 34.8 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 18 GFISFIRYVKQMHIPDHPSVS-AI---VVLTGEPIRIER--AFELLENQIGEKIFIS--G 69
G + + R V + S+ I VV+TG RI A L E + +S
Sbjct: 627 GPVLYRRTVADAPVAPAWSLDSGILDEVVITGGAGRIGLHYARHLAERGARRIVLLSRRA 686
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
V +V L C + +++ T
Sbjct: 687 VDPAV-LAELTAARGTEVVSVPCDLT-DRESIRT 718
>gi|257055414|ref|YP_003133246.1| hypothetical protein Svir_13720 [Saccharomonospora viridis DSM
43017]
gi|256585286|gb|ACU96419.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
43017]
Length = 210
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISGV---HHSV 74
+ P V AIVVL G R++ A +L E + + I +G +
Sbjct: 35 ARADERPRVDAIVVL-GAAQYNGRPSEIFQARLDHARQLYEEGVADVIVTTGGMRDGDAY 93
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
++ + Q + + +T + + A+ + +++ V++V+ +H R
Sbjct: 94 TEAEAGANWLVSQGVPVEATLPVGEGSDTLRSLRAAAVVLRERDWNDVVLVSDPWHSLRA 153
>gi|213512395|ref|NP_001134830.1| SCO4629 [Salmo salar]
gi|209736410|gb|ACI69074.1| SCO4629 [Salmo salar]
Length = 216
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 10/131 (7%)
Query: 36 SVSAIVVLTGEPIRI-ERAFELLENQIGEKIFISG--VHHSVS-----KDILLQKIPIRQ 87
I+ L +R+ ER+ L + +G + + + + + +R
Sbjct: 24 KSDVIIGLGCHDVRVAERSAALFLEGWAPWLLFTGYQGNQTAGVWSRPEADVFLDVALRM 83
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINSTV 145
+ I + +A NT N + ++ N + V++V + R R
Sbjct: 84 GVPRGNILLETEATNTGDNICFSYRLLKQRNIPANRVILVQQPFMERRVSATFLRQWPDQ 143
Query: 146 QFIPYPIISHD 156
+ I++
Sbjct: 144 GEHTHAIVTSP 154
>gi|323507998|emb|CBQ67869.1| related to antiviral protein SKI3 [Sporisorium reilianum]
Length = 1569
Score = 34.5 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
H+ + EL+ I V I + + +L + L ++ EY
Sbjct: 567 HLEQAKHELEAILERVDPISFAGATAELRAKLWWRLGRCLWLMDGEY 613
>gi|315652504|ref|ZP_07905488.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485220|gb|EFU75618.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 268
Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 42/182 (23%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTG--------EPI- 48
R + + +G + FI Q + D P + +++L G
Sbjct: 52 RIPLWSVVSVYTLATLGILIFIITSIQISLSLPKEDEPGLDFLIIL-GTKPDLEKKGSEC 110
Query: 49 --RIERAFELLENQIGEKIFISG-VHHSVSKDIL-LQKIPIRQDLAECCIDIGYKALNTE 104
R+++A E ++N I ISG + + + + I+ + + I + ++ NT
Sbjct: 111 KYRLDKAIEYIDNNPDTIIVISGGIGRDKKIESMEMADYLIKNGIDKNNILVEIQSHNTR 170
Query: 105 GNAQEASAWAEKNNF------------------------HHVLIVTHDYHMPRTFLELQR 140
N + A ++ N + I+T+D+H+ R+ L +R
Sbjct: 171 QNLIYSKALIDRYNSDIKRRTDITIVNDMGPVLEVEDKPQTIGILTNDFHIFRSMLIAKR 230
Query: 141 IN 142
+
Sbjct: 231 VG 232
>gi|302187398|ref|ZP_07264071.1| sensor histidine kinase [Pseudomonas syringae pv. syringae 642]
Length = 341
Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA 39
R F L ++ ++ FI F +Y M P A
Sbjct: 11 RLFGGALLAIMLAHLLAFIWFTQY--GMRPPPEDRPDA 46
>gi|225619978|ref|YP_002721235.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
gi|225214797|gb|ACN83531.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
Length = 273
Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A+EL ++ + I +SG + S ++ ++ I+ + + I + + T +
Sbjct: 110 RMEAAYELYKSGKVKYILVSGDNRYKSYNEPRQMRLDLIKLGVNKKHIFLDFAGFRTRDS 169
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
A+ E NF IV+ +H R L ++ + I Y
Sbjct: 170 IIRANKVFELTNFT---IVSQPFHNERAILIARQ--KNINAIAY 208
>gi|328884053|emb|CCA57292.1| hypothetical protein SVEN_4006 [Streptomyces venezuelae ATCC 10712]
Length = 127
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDIL-------LQKIPIRQDLAECCIDIGYKALNT 103
+ A +L + + + +G +++ + ++ I + + + +A NT
Sbjct: 41 DVAVDLYKRGMAPLLVFTGATSPTTRERMPRGEAVHYKERAIELGVPASAVMVEPRARNT 100
Query: 104 EGNAQEASAWAEKNNF--HHVLIVT 126
N + + +L+++
Sbjct: 101 GENIRFSQDLLTDAGIAVTSILLIS 125
>gi|229916781|ref|YP_002885427.1| hypothetical protein EAT1b_1054 [Exiguobacterium sp. AT1b]
gi|229468210|gb|ACQ69982.1| protein of unknown function DUF218 [Exiguobacterium sp. AT1b]
Length = 166
Score = 34.5 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 47 PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI+ A + ++ +G +++ ++++ + Q + I + + +T
Sbjct: 29 RHRIDVAAAYAKAHPHVELIATGGQGPDEGMAEARVIERELMAQGIDATRIHVEATSTST 88
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + + + V IVT+D+H+PR L
Sbjct: 89 IENFEHSRLFWD--GASGVTIVTNDFHVPRARL 119
>gi|134098087|ref|YP_001103748.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
gi|291007454|ref|ZP_06565427.1| hypothetical protein SeryN2_23263 [Saccharopolyspora erythraea NRRL
2338]
gi|133910710|emb|CAM00823.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
Length = 204
Score = 34.5 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-----------RIERAFELLENQIGEKIFISG---VHHSV 74
+ V +VVL G R+++A EL + + I G
Sbjct: 29 ARADERRPVDMVVVL-GAAQYHGKPSDVLEARLKQALELYREGMTDHIVTVGGRQTGDKY 87
Query: 75 SKDILLQKIPIRQDLAE---CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++ +K + + + +D+G +T G+ + +A A ++ + LIV+ +H
Sbjct: 88 TEAQAGKKWLVEEGVPADRITDVDVGS---DTLGSVRAVAALAGQHGWSSALIVSDPWHS 144
Query: 132 PRT 134
R
Sbjct: 145 LRA 147
>gi|239944014|ref|ZP_04695951.1| hypothetical protein SrosN15_23646 [Streptomyces roseosporus NRRL
15998]
Length = 357
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 50/145 (34%), Gaps = 22/145 (15%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRIERAFEL---- 56
+ F + F+++ ++ + V +V+L R+ +
Sbjct: 157 VAFLFLCFLAYAFLYGRIRVRGD--VDFVVMLGSGLIGGERVPPLLASRLRSGLRIQERQ 214
Query: 57 -LENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ +SG + + + + + + + ++ T N + + +
Sbjct: 215 IARGGPAPVLLVSGGQGPDEKLPEAEAMGRWLVAEGADPDLVLEENRSRTTTENLRFSRS 274
Query: 113 WAEKNNFHHV-LIVTHDYHMPRTFL 136
E + +V ++VT+++H R +
Sbjct: 275 LMEGADEGYVCVVVTNNFHAFRAAM 299
>gi|330829535|ref|YP_004392487.1| integral membrane protein [Aeromonas veronii B565]
gi|328804671|gb|AEB49870.1| Integral membrane protein [Aeromonas veronii B565]
Length = 256
Score = 34.5 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 30/155 (19%)
Query: 9 FVCLIFFIMGF----ISFIRYVKQMHIP----DHPSVSAIVVLTGEP------------- 47
LI +MG R ++Q P HP++ AIVVL
Sbjct: 44 LSLLIVALMGMRPVSYELARGLEQTFPPFEASQHPNIEAIVVLGNGHVSDPAVPMRSWQN 103
Query: 48 ----IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R L + ++ SG ++S + ++ + + +
Sbjct: 104 NISLARTLEGVRLAQAYPDAELVFSGYVSGDTLSNAEVNARMAESLGIPRSRMTLFENNK 163
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+T EA + + V +V+ H+PR
Sbjct: 164 DTHD---EAVSISRHLKGKEVALVSSATHLPRAMA 195
>gi|104774771|ref|YP_619751.1| hypothetical protein Ldb2161 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514906|ref|YP_813812.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423852|emb|CAI98885.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116094221|gb|ABJ59374.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 366
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 47 PIRIERAFELL--ENQIGEKI--FI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + + + G+ + FI SG + +S+ + I++ + + I +
Sbjct: 203 AARINRAIQFAYHQQEKGQPLPKFIMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLED 262
Query: 99 KALNTEGNAQEASAWAEKNNFHH----VLIVTHDYHMPRTFLELQRINSTVQFI-----P 149
++ NTE N E S N++ + T +YH+ R+ + +R I P
Sbjct: 263 QSRNTEQN-MEFSQIVAYNDYGNDNFKACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP 321
Query: 150 YPIISHDLEENSSIFKIKILR 170
Y + + L E + +F + LR
Sbjct: 322 YYLPNAVLREFAGMFVMNRLR 342
>gi|103487106|ref|YP_616667.1| GTP-dependent nucleic acid-binding protein EngD [Sphingopyxis
alaskensis RB2256]
gi|98977183|gb|ABF53334.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 365
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ +A +LL ++ G Q + + L C +D G A GNA
Sbjct: 166 LGQALDLLREGKPARLVEPGDDEEARVLRTAQLLTSKPVLYVCNVDEGSAAN---GNA 220
>gi|313124735|ref|YP_004034994.1| hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281298|gb|ADQ62017.1| Hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 366
Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 47 PIRIERAFELL--ENQIGEKI--FI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + + + G+ + FI SG + +S+ + I++ + + I +
Sbjct: 203 AARINRAIQFAYHQQEKGQPLPKFIMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLED 262
Query: 99 KALNTEGNAQEASAWAEKNNFHH----VLIVTHDYHMPRTFLELQRINSTVQFI-----P 149
++ NTE N E S N++ + T +YH+ R+ + +R I P
Sbjct: 263 QSRNTEQN-MEFSQIVAYNDYGNDNFKACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP 321
Query: 150 YPIISHDLEENSSIFKIKILR 170
Y + + L E + +F + LR
Sbjct: 322 YYLPNAVLREFAGMFVMNRLR 342
>gi|259047668|ref|ZP_05738069.1| membrane protein [Granulicatella adiacens ATCC 49175]
gi|259035859|gb|EEW37114.1| membrane protein [Granulicatella adiacens ATCC 49175]
Length = 343
Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 49 RIERAFELLENQIGEKI-FIS----GVHHSVSKD-ILLQKIPIRQDLAECCIDIGYKALN 102
RI++A E + I I+ G +S+ +L + D+ + + ++
Sbjct: 189 RIDKAVEAFKKSKNPNIKLIASGGKGADEKISEAHAILNYLMEETDVPRESVLLEEESRT 248
Query: 103 TEGNAQEASA----WAEKNNFHHVLIVTHDYHMPRT 134
T N + + ++ F L VT+DYH+ RT
Sbjct: 249 TYENLLFSKRLGETFLKEPRF---LFVTNDYHVFRT 281
>gi|302536555|ref|ZP_07288897.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302445450|gb|EFL17266.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 337
Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 47 PIRIERAFELLENQIGE-----KIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ + ++ E Q+ + SG VS+ + I + + + +
Sbjct: 179 ASRLRKGQQIYEAQLARGSRPPVLLTSGGKGSDERVSEARAMADWLIAEGVPAEHVKLEE 238
Query: 99 KALNTEGNAQEAS--AWAEKNNFHHVLIVTHDYHMPRTFL 136
+ TE N + A+K + V +VT+++H R +
Sbjct: 239 NSATTEENMLFSKGIMLADKPGYRCV-VVTNNFHAFRAAM 277
>gi|300857915|ref|YP_003782898.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685369|gb|ADK28291.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205641|gb|ADL09983.1| Hypothetical protein CpC231_0496 [Corynebacterium
pseudotuberculosis C231]
gi|302330192|gb|ADL20386.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308275876|gb|ADO25775.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 155
Score = 34.5 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R++ A EL + G + +SG + L + + + I +A +T N +
Sbjct: 30 RLQHALELSQQTSGP-VVVSGKGEAAVMGDWLVRHGLDPH----RLIIEPEATSTNENLE 84
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
A A + H ++VT D+H RT + + + + + + + +I
Sbjct: 85 NAHALLPET--HTWIVVTSDFHKLRTLAWARHLGIPIT-VSSAVTKPPFRVRNFVREIFA 141
Query: 169 L 169
L
Sbjct: 142 L 142
>gi|260775691|ref|ZP_05884587.1| diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
gi|260608107|gb|EEX34276.1| diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
Length = 541
Score = 34.5 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT-----FLELQRINSTV 145
T NA +A + ++ ++ DY MPR LE+++ + V
Sbjct: 32 TAENAAQALEVLDAHHIDLII---TDYRMPRMTGTELLLEVKQRHPEV 76
>gi|300811552|ref|ZP_07092040.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497470|gb|EFK32504.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 366
Score = 34.5 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 47 PIRIERAFELL--ENQIGEKI--FI-SGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
RI RA + + + G+ + FI SG + +S+ + I++ + + I +
Sbjct: 203 AARINRAIQFAYHQQEKGQPLPKFIMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLED 262
Query: 99 KALNTEGNAQEASAWAEKNNFHH----VLIVTHDYHMPRTFLELQRINSTVQFI-----P 149
++ NTE N E S N++ + T +YH+ R+ + +R I P
Sbjct: 263 QSRNTEQN-MEFSQIVAYNDYGNDNFKACFFTSNYHVFRSAIYAKRAGLDANGIGSYTRP 321
Query: 150 YPIISHDLEENSSIFKIKILR 170
Y + + L E + +F + LR
Sbjct: 322 YYLPNAVLREFAGMFVMNRLR 342
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.154 0.475
Lambda K H
0.267 0.0475 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,156,948,398
Number of Sequences: 14124377
Number of extensions: 184046729
Number of successful extensions: 819345
Number of sequences better than 10.0: 2901
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 1924
Number of HSP's that attempted gapping in prelim test: 815741
Number of HSP's gapped (non-prelim): 3354
length of query: 207
length of database: 4,842,793,630
effective HSP length: 133
effective length of query: 74
effective length of database: 2,964,251,489
effective search space: 219354610186
effective search space used: 219354610186
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 78 (34.4 bits)