BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780579|ref|YP_003064992.1| hypothetical protein
CLIBASIA_02330 [Candidatus Liberibacter asiaticus str. psy62]
(207 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780579|ref|YP_003064992.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040256|gb|ACT57052.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ
Sbjct: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH
Sbjct: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL
Sbjct: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
LLSIQLSLSTQTASQFFITLIEEITVK
Sbjct: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
>gi|315121772|ref|YP_004062261.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495174|gb|ADR51773.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 188
Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 160/186 (86%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRY WY L CLIFFI GF+ FI+Y+ Q+ IP +PS++AIVVLTGEP RIE+AFELLEN+
Sbjct: 1 MRYLWYSLAACLIFFIGGFVLFIQYIVQIPIPANPSINAIVVLTGEPNRIEKAFELLENK 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IG+++FISGVHHSVSKDILLQKIPIR+DLAECC+DIGYKALNT GNA+EA W K+++H
Sbjct: 61 IGQRVFISGVHHSVSKDILLQKIPIRKDLAECCVDIGYKALNTAGNAKEALEWIRKHDYH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLI+THDYH+PR LEL R NS +F+PYPII+HDL++N+ I +K+LR+ IEYLKIL
Sbjct: 121 HVLIITHDYHIPRILLELNRKNSMTKFVPYPIITHDLQKNTLILYMKMLRMTFIEYLKIL 180
Query: 181 LLSIQL 186
LLS+Q+
Sbjct: 181 LLSLQI 186
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 14 WGGFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 74 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY+K+LL
Sbjct: 134 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYVKVLLA 193
Query: 183 SIQ 185
+
Sbjct: 194 GAR 196
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R +G F CL+ + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 RLLRWGGFACLLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQ 91
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGVH + + + + DL CC+DIGY A++T GNA+EAS W
Sbjct: 92 KGAGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHTKG 151
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K
Sbjct: 152 YRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVK 211
Query: 179 ILLLSIQ 185
+LL +
Sbjct: 212 VLLTGAR 218
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIG+ A++T GNA+E S W +
Sbjct: 92 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPRT EL ++ ++FIPYP+++ DL+ + +RV+L EYLK+L
Sbjct: 152 SVLVVTNNYHMPRTLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYLKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LAGAR 216
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 118/184 (64%), Gaps = 3/184 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LFV L+ F++GF++F V M P D P+ AI+VLTG RI+ A LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPA-DAIIVLTGGQSRIQAAVNLLKDKRGKRL 163
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S ++ +L + Q L +CC+D+ ALNT GNA E+ W NN+ V++V
Sbjct: 164 LISGVHPSTNEKVLQRATHADQSLFDCCVDLDRSALNTIGNAAESERWIRTNNYRRVILV 223
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ + V+F+PYP+++ + E+S + + LRVL IEY+K L ++
Sbjct: 224 TNNYHIPRSTLEMSYLMKDVEFVPYPVVNGERREHSWVAEGDTLRVLFIEYVKYLGAVVR 283
Query: 186 LSLS 189
+ S
Sbjct: 284 VGAS 287
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 103/181 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+RY Y + + + + GF+ F V M P P AIVVLTG RI++A +LL
Sbjct: 38 LRYGGYAILLLMACLVAGFLHFADDVTAMMPPAEPKADAIVVLTGGYQRIDQAVDLLRKG 97
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGVH S S + + DL CC+D+GY+A++T GNA E + W F
Sbjct: 98 SGRRLLISGVHPSTSPATIRKMTQASPDLFACCVDMGYRAIDTIGNANETAQWIHDKGFS 157
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT +YHM R+ +EL+R + QFIPYP+++ DL + LR L+ EY KIL
Sbjct: 158 SVLVVTSNYHMRRSLMELRRTDHETQFIPYPVVTADLRTRAWYADPNALRTLMSEYAKIL 217
Query: 181 L 181
+
Sbjct: 218 I 218
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LFV L+ F++GF++F V M P D P+ AI+VLTG RI+ A +LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPA-DAIIVLTGGQSRIQAAVDLLKDKRGKRL 163
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + ++ L + Q L +CC+D+ ALNT GNA E+ W NN+ V++V
Sbjct: 164 LISGVHPATNEKALQRATHADQSLFDCCVDLDRSALNTIGNATESERWIRTNNYRRVILV 223
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ D E+S + + LRVL IEY+K L +++
Sbjct: 224 TNNYHIPRSTLEMSYRMKDVEFIPYPVVNGDRREHSWVSEGDTLRVLFIEYVKYLGAAVR 283
Query: 186 LS----LSTQT 192
+ TQT
Sbjct: 284 VGTTELFGTQT 294
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 96 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R +G F CL+ + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 30 RLLRWGGFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGGYQRIDQAVELLQ 89
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISG H + + + + DL CC+DIGY A++T GNA+EAS W
Sbjct: 90 KGAGKRLLISGAHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHAKG 149
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K
Sbjct: 150 YRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVK 209
Query: 179 ILLLSIQ 185
+LL +
Sbjct: 210 VLLTGAR 216
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ +G
Sbjct: 34 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGVG 93
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 94 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 153
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 154 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 213
Query: 183 SIQ 185
+
Sbjct: 214 GAR 216
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 7 GLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
G FV L F F+ GF+ F V + P P AIVVLTG RIE+A ELL++ G
Sbjct: 38 GFFVLLAFLAVFVAGFLYFADTVASLQPPAAPKADAIVVLTGGFQRIEQAVELLKSGAGN 97
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGV+ + + + + DL +CC+DIG++A++T GNA EA W + + VL
Sbjct: 98 RLLISGVNPATTGSQIRRNTQSSADLFKCCVDIGHEAVDTIGNATEAGQWIHDHGYRSVL 157
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+VT++YHMPR+ LEL+R+ +FI YP+++ DL+ ++ + + ++ +L+EY K
Sbjct: 158 VVTNNYHMPRSLLELRRVRPDTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAK 212
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 6 YGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+G F C++ + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 96 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 7 GLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
G FV L F FI GF+ F V + P P AIVVLTG RI++A +LL+ G+
Sbjct: 28 GFFVLLAFLTVFIAGFLQFADTVASLQPPATPKADAIVVLTGGFQRIDQAVDLLKLGAGK 87
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH S ++ + + DL +CC+DIG+ A++T GNA E S W + +L
Sbjct: 88 RLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGHAAIDTIGNATETSLWIRNRGYRTIL 147
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+VT++YHMPR+ LEL+R +FI YP+++ DL+ + + +L+ +L+EY K
Sbjct: 148 VVTNNYHMPRSLLELRRARPETEFIAYPVVNSDLKTTNWLRNPLVLKAILLEYGK 202
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R G + + F ++GF F + ++ P V AIVVLTG RIE+A LLE+
Sbjct: 9 LRILTIGAILGVTFVVIGFFRFTDEIAELKAPGTSVDVDAIVVLTGGYQRIEQALALLED 68
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
IG+++ ISGV+ S S L + + +CC+DIGY+AL+T GNA E + W +NN+
Sbjct: 69 GIGDRLLISGVNPSTSSAALRRATGTQSATFDCCVDIGYQALDTIGNANETADWIRQNNY 128
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
VL+VT++YHMPR+ +EL + + V F+ YP+ DL+ + + LR L EY K
Sbjct: 129 VRVLVVTNNYHMPRSLMELSQASPDVSFVAYPVTHADLKTEAWLTDPVALRTLFTEYAKY 188
Query: 180 LLLSIQLSLSTQTAS 194
L ++ TA+
Sbjct: 189 SLARLRNWSGATTAT 203
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 112/185 (60%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRSFFVLLAFLAVFIAGFLQFADTVASLQPPPTPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG +A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGREAVDTIGNATETSHWIRSRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +F+ YP+++ DL+ + + +L+ +L+EY+K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYVKYS 204
Query: 181 LLSIQ 185
+ S++
Sbjct: 205 VSSLR 209
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF+ F V + P P AIVVLTG RI++A ELL+ G+++ ISGVH + +
Sbjct: 4 GFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAGKRLLISGVHPTTTPA 63
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ + DL CC+DIG+ A++T GNA+E S W + VL+VT++YHMPR+ E
Sbjct: 64 QIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAE 123
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
L ++ ++FIPYP+++ DL+ + +RV+L EY K+LL +
Sbjct: 124 LSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLTGAR 171
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 103 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 161
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 162 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 221
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 222 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 281
Query: 186 LSLST 190
L ++
Sbjct: 282 LGSAS 286
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 115
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 116 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 175
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 176 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 235
Query: 186 LSLST 190
L ++
Sbjct: 236 LGSAS 240
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 11 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 69
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 70 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 129
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 130 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 189
Query: 186 LSLST 190
L ++
Sbjct: 190 LGSAS 194
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
L ++
Sbjct: 194 LGSAS 198
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
L ++
Sbjct: 194 LGSAS 198
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKERRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
L ++
Sbjct: 232 LGSAS 236
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 5 WYGL-FVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W G FV L+ + G F+ F + + P P AI+VLTG RI++A ELL G
Sbjct: 37 WGGFAFVFLVAIVFGGFLHFADSITTLKPPLEPKADAIIVLTGGYQRIDQAVELLRTGAG 96
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISG H + + + + +L CC+DIGY A++T GNA+EA+ W + +
Sbjct: 97 NRLLISGAHPTTTPSQIRKLTQSPANLFNCCVDIGYDAIDTIGNAREAAKWIHARGYKSI 156
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL+ ++ FIPYP+++ DL+ + LR ++ EY K+LL
Sbjct: 157 LVVTNNYHMPRSLAELKYVDPATDFIPYPVVNSDLKTKNWFTDPNALRTMIYEYAKVLLA 216
Query: 183 SIQ 185
+
Sbjct: 217 GAR 219
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 111
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 112 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 171
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 172 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 231
Query: 186 LSLST 190
+ ++
Sbjct: 232 VGSAS 236
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GF F V + P +P AI+VLTG R++ A +LL + GE++
Sbjct: 42 LLILAVLFAGGFGWFANKVAHLTTPANPEKADAIIVLTGGQSRLDAAMDLLASGKGERLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + + V++VT
Sbjct: 102 ISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAYGTVILVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K LL
Sbjct: 162 NNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKYLL 216
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 115
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++V
Sbjct: 116 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVV 175
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 176 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 235
Query: 186 LSLST 190
L ++
Sbjct: 236 LGSAS 240
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF+ F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 72 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 130
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++V
Sbjct: 131 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVV 190
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 191 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 250
Query: 186 LSLST 190
L ++
Sbjct: 251 LGSAS 255
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ +I F+ GF F V M P P+ AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPA-EAIVVLTGGQSRVKAGINLLKEKRGKRL 73
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++V
Sbjct: 74 LISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVV 133
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++
Sbjct: 134 TNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVR 193
Query: 186 LSLST 190
+ ++
Sbjct: 194 VGSAS 198
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 1/182 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLEN 59
+R + + F GF F V + P +P+ AI+VLTG R++ A +LL +
Sbjct: 35 LRLSALSVLILATLFAGGFGWFANKVSHLTTPANPARADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYNKY 214
Query: 180 LL 181
LL
Sbjct: 215 LL 216
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Query: 8 LFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
+ VC+I F GF+ F V M P+ AI+VLTG RIE+A LL + +G++
Sbjct: 35 ILVCVIALGAFSGGFLWFADSVASMRPPEGARGDAIIVLTGGYQRIEQAVGLLRDGVGKR 94
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W +N+ +++
Sbjct: 95 LLISGVNPATTRSQIRKMTQGSSDMFTCCVDMGYKAIDTIGNANEAASWIRDHNYSSIVV 154
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT++YHM R+ EL+ + +FI YP+IS DL + + ++R LL EYLK +
Sbjct: 155 VTNNYHMHRSLHELRNASPQTEFIAYPVISADLVRTNWFVEPDVVRTLLYEYLKFV 210
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V F GF F V + P +P+ AI+VLTG R++ A ELL + GE++
Sbjct: 42 LLVLATLFAGGFGWFANKVSHLTTPANPTKADAIIVLTGGQSRLDAAMELLASGKGERLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S S+ L + L CC+DI AL+T GNA++++ W + + V++VT
Sbjct: 102 ISGVHPSASRRQLQAATGGDKKLFSCCVDIDRAALDTIGNAEQSAKWVTNHAYGTVILVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K LL
Sbjct: 162 NNYHMPRSLLEMGRLLHGARLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKYLL 216
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 104/174 (59%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ L F GF+ F V M P+ AI+VLTG RIE+A LL + +G+++ ISG
Sbjct: 40 ITLGAFSGGFLWFADSVASMRPPEGAKGDAIIVLTGGYQRIEQAVGLLRDGVGKRLLISG 99
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V+ + ++ + + D+ CC+D+GYKA++T GNA EA++W + + +++VT++Y
Sbjct: 100 VNPATTRTQIRKMTQGSSDMFSCCVDMGYKAIDTIGNANEAASWIRDHGYSSIVVVTNNY 159
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
HM R+ EL + QFI YP+IS DL + + ++R +L EY+K ++ +
Sbjct: 160 HMHRSLHELHNASPQTQFIAYPVISADLARTNWFAEPDVVRTMLYEYMKFVIAA 213
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + FF GF+ F +Q+ P+ P AI+VLTG RIE LL+ ++G ++
Sbjct: 51 LLMIVFFFCAGFVIFSEKTEQLKPPNPLPKADAIIVLTGGEKRIETGLNLLQQELGSRLL 110
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+++ V IVT
Sbjct: 111 ISGVNTTTNLKRFMYSTHITPQLFTCCVDIGHKAINTKGNAEESADWIKKHHYQTVYIVT 170
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYHM R+ EL+ + + FI YP+ ++E S+I +I +R+L+ +Y+K L + I+
Sbjct: 171 HDYHMWRSLRELKYLMPDINFIAYPVKKSEIE--STIQQINQIRILVFQYIKTLEVYIRT 228
Query: 187 SL 188
+
Sbjct: 229 AF 230
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 10 VCLIFFIMG-FI--SFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+CL+ + G FI SF+RY + + + P AIVVLTG RIERA LL+N G
Sbjct: 33 LCLVVLVAGGFIVGSFLRYAETTAAVSRLENVPPADAIVVLTGGANRIERAISLLKNGYG 92
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGV+ + S + + DL ECC+DI AL+T GNA EA WA +N F +
Sbjct: 93 KRLLISGVNENTSARAIARATNTDLDLFECCVDIDVAALDTVGNAMEAVRWAAENGFDEL 152
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT DYHM R+ +E R+ + P + +L ++ +I + L VL++EY K++
Sbjct: 153 ILVTSDYHMQRSLIEFDRVGDLDRITPVAVRLDELWQDDTIPTRRGLEVLVMEYAKLMAA 212
Query: 183 SIQLSL 188
++ ++
Sbjct: 213 RVRAAI 218
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 32 PDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL 89
P HP V AI+VLTG RIE +LLE G ++ ISGV + + L++ + I L
Sbjct: 66 PPHPLQKVDAIIVLTGGKNRIETGLKLLEKGFGSRLLISGVSTTTHPNKLIRMMNINPQL 125
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
CCIDIGY+A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE Q + + FI
Sbjct: 126 FSCCIDIGYQAINTQGNAKESADWIKKHRYKTLYIVTHDYHMMRSLLEFQYLMPNINFIA 185
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
YP I D+ + S I + +R+L++EY+K + + I+++LS+
Sbjct: 186 YP-IKQDVAD-SWIKEANQIRLLVLEYIKNICVKIRMTLSS 224
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 10/186 (5%)
Query: 2 RYFWYG-------LFVCLIFFIMGFISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIER 52
R W G +F+ + ++ GF F +V ++ P +P+ IVVLTG RI+
Sbjct: 5 RRMWVGVRSAAATIFLFFVLYVAGFGIFADHVVRLRAPAELNPA-DGIVVLTGGQSRIDT 63
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+LL+ +++ ISGV+ D L + L CC+DI ALNT GNAQE++
Sbjct: 64 GMDLLKAGKAKRLLISGVNPVARVDDLRLATGGDRALFNCCVDIDRAALNTVGNAQESAK 123
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
W N + +++VT++YHMPR+ LE++RI PYP+++ L++ + I LRVL
Sbjct: 124 WVSANTYGSIIVVTNNYHMPRSLLEMRRILPNADLQPYPVVNTPLDDGAWISNPDALRVL 183
Query: 173 LIEYLK 178
LIEY K
Sbjct: 184 LIEYTK 189
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W NN+H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANNYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 42 LVVIVFIFWGGFIIFSEKTERLVPPTPLPKADAIIVLTGGEHRIETGLHLLQKGLGSRLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ S + + + I L CCIDIG++A+NT GNAQE++AW +K+++ + IVT
Sbjct: 102 ISGVNTSTNLKSFMHNMHISPQLISCCIDIGHQAINTRGNAQESAAWIKKHHYKTLYIVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYH+ R+ EL+ + + FI YP+ E S+I +IK R+L+ +Y+K L + I+
Sbjct: 162 HDYHIWRSMRELKYLMPDIHFIAYPVKKSKAE--STIQQIKQARILIFQYIKTLQVYIRT 219
Query: 187 SL 188
+
Sbjct: 220 AF 221
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 10 VCLIFFIMGFI-------SFIRYVKQMHIPDHPS----VSAIVVLTGEPIRIERAFELLE 58
+CL ++G + F+R+ +++ + P+ IVVLTG +RI++A +LL+
Sbjct: 38 LCLAAVLVGVLLGGYLAGGFVRFAEEVSLLAKPAPIGAADGIVVLTGGALRIDQAIDLLK 97
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G ++ ISGV+ S L + +DL CC+D+ Y ALNT GNA+ A WA +
Sbjct: 98 EGRGRRLLISGVNPGTSAATLARMTDTDRDLFACCVDLDYAALNTVGNAEIARNWAREQG 157
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
F +++VT DYHMPR+ E RI PY + DL + LRVLL EY K
Sbjct: 158 FRDLILVTSDYHMPRSLREFDRIGELRSVTPYAVRRDDLWSAELMPNTAGLRVLLTEYAK 217
Query: 179 ILLLSIQL 186
++ ++L
Sbjct: 218 LIAARVRL 225
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 15/198 (7%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVK---QMHIPDHPSVSAIVVLTGEPIRIERAFELL 57
+R+F+ +C + F GF+ F+ ++ Q +P H IVVLTG RI ++ +LL
Sbjct: 41 VRFFFLLFLICSVAFAAGFLWFVEVLQPAVQAVVPKH--ADGIVVLTGGRDRISQSLDLL 98
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E +++ ISGVH S S + + R L +CC+D+ KALNT GNA+E ++W KN
Sbjct: 99 ETGSAKRLLISGVHPSTSAKQIARLNSKRMWLFDCCVDLDRKALNTIGNAEETASWVRKN 158
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE-----ENSSIFKIKILRVL 172
F+ +L+VT YHMPR ELQ P P+ +L+ E+SSI K+ L
Sbjct: 159 QFNSLLVVTSAYHMPRALAELQVRLPEADLYPSPVYHKELDLEHWYESSSITKL-----L 213
Query: 173 LIEYLKILLLSIQLSLST 190
L EY+K +L+ +++ L T
Sbjct: 214 LREYVKYILVRLRVELDT 231
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 6/191 (3%)
Query: 2 RYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
RYF + L + ++FF GF+ F +Q+ P P AI+VLTG RIE +LL
Sbjct: 42 RYFPPTAFFLLMIVLFFCAGFVVFSEKTEQLTPPSPLPKADAIIVLTGGENRIETGLDLL 101
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +G ++ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+
Sbjct: 102 QQGLGSRLLISGVNTTTTLKRFMHSTHITPQLFACCVDIGHKAINTKGNAEESAVWIKKH 161
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ V IVTHDYHM R+ EL+ + + FI YP+ E S + ++ +R+L +Y+
Sbjct: 162 HYKTVYIVTHDYHMWRSMRELKYLMPDINFIAYPVKKSGDE--SIVQQLNQIRILAFQYI 219
Query: 178 KILLLSIQLSL 188
K + + I+ +
Sbjct: 220 KTIDVYIRTAF 230
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 97/168 (57%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F++F + AIVVLTG P RI A LL + G ++ I+GV+ + S D
Sbjct: 84 FLAFTAQIAAREPAAVKPADAIVVLTGGPSRIVDAVGLLADGRGRRLLITGVNPTTSMDE 143
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P + L CCID+G+KALNT GNA EA+ WA + F +++VT +HMPR +EL
Sbjct: 144 MRRALPDGEHLLGCCIDLGHKALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMEL 203
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
R V+ + YP+++ + S L++L+ EYLK ++ ++++
Sbjct: 204 GRALPDVELVSYPVVTTRTQPESWWSDPGTLKLLVKEYLKFIMATVKI 251
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 17 MGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ F++F V+Q+ P HP V AI+VLTG RIE ELL+ ++G ++ ISGV+ ++
Sbjct: 53 LTFVAFTEKVEQL-TPPHPLPKVDAIIVLTGGKNRIETGLELLQKKLGSRLLISGVNTTI 111
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ L++++ I L CC+DI + A NT+GNA+E++ W K+ + + IVTHDYHM R+
Sbjct: 112 HPNKLIRRMNINPRLFACCVDIDHHATNTQGNAKESAHWINKHRYKTLYIVTHDYHMIRS 171
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
LE + + + FI YPI + + S I + +R+L +EY+K + + I++ LS+
Sbjct: 172 LLEFKYLMPNINFIAYPIKQNVTD--SWIKQANQIRLLALEYVKNISVKIRIILSS 225
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 50 LAIIVFIFWGGFIVFSEKTERLSPPKPLPKADAIIVLTGGENRIETGLHLLQKGLGSRLL 109
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CCIDIG++A+NT GNA+E++ W +K++F + IVT
Sbjct: 110 ISGVNTTTNLKGFMHNRHITPRLVSCCIDIGHQAINTRGNAKESATWIKKHHFKTLYIVT 169
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HDYHM R+ EL+ + + FI YP+ + E S+I +I +R+LL +Y+K L
Sbjct: 170 HDYHMWRSMRELKYLMPDIHFIAYPVKKSNAE--SAIQQINQIRILLFQYIKTL 221
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 95/152 (62%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L +++ ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRVGSAS 163
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 100/169 (59%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F + V + P+ S IVVLTG RIERA LL+ + ++ ISGV+ + +
Sbjct: 20 FLLFAQSVVSIRAPEEASADGIVVLTGGQDRIERAVGLLQEERARRLLISGVYPATTDRQ 79
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
++++ L CC+D+ KALNT GNA E +AWA + F +L+VT YH+PR LEL
Sbjct: 80 IVERTSGDLPLFRCCVDLDRKALNTVGNAVETAAWARTHGFSSLLLVTSAYHLPRAALEL 139
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+ + ++ +PYP+ + DL +S + + +R+LL E++K L +++
Sbjct: 140 KAVMPELELVPYPVFAEDLMLSSWYRRPQTIRLLLREFVKYTLARLRIG 188
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 103/187 (55%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ F+ GF+ F + IVVLTG RI +LL + G+++ ISGV+
Sbjct: 45 LLFVGGFVVFTTAIAPREPAGLKPADGIVVLTGGASRIADGVQLLASGHGQRLLISGVNR 104
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+ S+D + + +P + L +CC+D+G++ALNT GNA EA+ W F +++VT +HMP
Sbjct: 105 ATSQDEIRRTLPDNEHLLDCCVDLGHRALNTFGNAIEAAEWTRAQGFRSLVVVTSAWHMP 164
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
R +EL R V+ + YP+++ ++ + +++LL EYLK ++ ++ +
Sbjct: 165 RALVELGRALPEVELVAYPVVTDRMQSGGWWTDPQTVKLLLKEYLKYMMAMAKIRPAQAV 224
Query: 193 ASQFFIT 199
A + ++
Sbjct: 225 APKATVS 231
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 39 AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+
Sbjct: 12 AIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDR 71
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
ALNT GN E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ +
Sbjct: 72 TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKR 131
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
E S + + LRVL EY+K L ++L ++
Sbjct: 132 EQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|218531041|ref|YP_002421857.1| hypothetical protein Mchl_3091 [Methylobacterium chloromethanicum
CM4]
gi|218523344|gb|ACK83929.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 234
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
V L+ GF++F+ V++ P V IV +TG R+ A +LL G ++ IS
Sbjct: 23 LVGLLALAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLIS 82
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +
Sbjct: 83 GVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSN 142
Query: 129 YHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YHMPRT +EL+ + IPYP++S L+ + + R+L EYLK L+ +
Sbjct: 143 YHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTR 202
Query: 188 LSTQTASQFFITLI 201
+ F LI
Sbjct: 203 FESDPEQSRFAVLI 216
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ ++ + + + IVVLTG R+ A ELL + G+++ I
Sbjct: 32 LALGFVATAAGFVAFLAQLRGAELKPNRTADGIVVLTGGSSRVSDAVELLASGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D +CC+D+ A+NT NA E WA + FH +++VT
Sbjct: 92 SGVHRTNGASDISRSVPDSKDWLDCCVDLDRSAVNTRSNAAETRRWAHERGFHSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ V+ IP+ +I + LR+LL EY K + + ++
Sbjct: 152 NYHMPRAIVEMSHAMPDVELIPFAVIGDKWRDEPWWTSGATLRLLLSEYAKYVAVEARVR 211
Query: 188 LS 189
L+
Sbjct: 212 LA 213
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 108/176 (61%), Gaps = 13/176 (7%)
Query: 11 CLI--FFIMG--FISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKI 65
CL+ F IMG F+ F V+Q++ P S AI+VLTG RIE LL+ +G ++
Sbjct: 17 CLLSLFLIMGTHFVIFSEKVEQLYPPVSLSKADAIIVLTGGERRIETGLRLLKQGLGSRL 76
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ + LL+ + I L ECC+D+GY+A NT+ NA+E++ W +K+++ + IV
Sbjct: 77 LISGVNATFHPKRLLRNMHIDPQLFECCVDLGYQATNTKSNAEESAVWIKKHHYKTLYIV 136
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL---RVLLIEYLK 178
THDYH+ R+ LEL+ + + FI YPI +EN + K+K L R+L EY+K
Sbjct: 137 THDYHIARSLLELRYLMPDINFIAYPI-----KENVTQNKVKQLNKIRMLASEYIK 187
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF+ ++ F++F ++ + P+ P AI+VLTG RI+ F+LL+ +G ++
Sbjct: 45 ALFITILLIGATFVTFSEKIEHLTPPNPLPQADAIIVLTGGENRIKTGFDLLQKGLGSRL 104
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + L+ I L +D GY+A NT+GNA+E++AW +++N+ V IV
Sbjct: 105 LISGVNSTIDLNKLIDATYINPHLLVSRVDFGYEATNTKGNAEESAAWIKQHNYKTVYIV 164
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS---IFKIKILRVLLIEYLK 178
THDYHM R+ LEL+ + + FI YPI +EN++ I +I +R+L+ EY+K
Sbjct: 165 THDYHMVRSLLELKYLMPHIDFIAYPI-----KENTTGSWIKQINQMRILVSEYIK 215
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 9 FVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ ++ ++G F SF V + P P AIVVLTG RI +A LLE E++ I
Sbjct: 60 FIVVVGLVVGSFASFAERVATIETPRDPRADAIVVLTGGKERISKAMRLLEEGRAERLLI 119
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH S + Q L CC+D+ ALNT GNA E ++W ++ F +L+VT
Sbjct: 120 SGVHPGSSARQIAQATSSDLPLFTCCVDLDRAALNTLGNATETASWVAEHEFETLLVVTS 179
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+PR LEL + +PYP+ S + + + L++L+ EY+K L ++++
Sbjct: 180 AYHLPRAELELAEVLPNAGLLPYPVFSSERDLTAWYSSFDTLKLLMREYVKYTLARLRIT 239
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 4/171 (2%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPI-RIERAFELLENQIGEKIFISGV 70
+ +++G +F V+ + D P+ IV LTG R+ A LLE GE++ ISGV
Sbjct: 12 LIWLVGLFAFADRVRNLTPADEPARADGIVALTGPSAERVNAAVRLLEQDKGERVLISGV 71
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ V + L + P L CC+D+G++A +T GNAQE +AWA N+ +++VT DYH
Sbjct: 72 NREVRRQELRELTPGSNRLFNCCVDLGFEAEDTGGNAQEIAAWAGSKNYTSLIVVTSDYH 131
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKIL 180
MPR+ LE++ ++ PY + + L +NS ++ + R + +EY+K L
Sbjct: 132 MPRSLLEIRSAAPGLELTPYAVSTPSL-DNSRWWRAAVTARRMTLEYMKYL 181
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q+ P P AI+VLTG RIE +LL+ ++G ++ ISGV+ + +
Sbjct: 60 FVAFTEKVGQLTPPQPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTTTHPN 119
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE
Sbjct: 120 RLIRIMNINPRLFSCCVDIDHQAVNTQGNAKESAHWIKKHRYKTLYIVTHDYHMIRSLLE 179
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V FI YP I ++ +N I + +R+L +EY+K + + I++ LS+
Sbjct: 180 FKYLMPDVNFIAYP-IKQNVADN-WIKQANQIRLLALEYIKSISVKIRIILSS 230
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 1 MRYFWYGL-FVCLIFFIMGFISFIRYVKQMHIPDHPS----VSAIVVLTGEPIRIERAFE 55
M+ W L +C + + I F Y ++ D P+ V AI+VLTG+ R+ E
Sbjct: 1 MKQSWLWLRGLCFVVVLASMIGFAAYAGKVTGYDLPATDNTVDAIIVLTGDAGRLSAGGE 60
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL++ + ISGVH SV+ + ++ + D CC+ +G +A +T GNA+EA+A+ +
Sbjct: 61 LLQDGRASHLMISGVHPSVTTADIRRQTGLGDDAFSCCVTLGREATDTVGNAREAAAYVQ 120
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N + ++IVT DYH+PR+ LE + V IPYP+ + ++ + LR+ L E
Sbjct: 121 ANGYDRLIIVTSDYHLPRSLLEFRSHMPGVDLIPYPVRTQAPWQD-----VGALRLWLQE 175
Query: 176 YLKILLLSIQLSLSTQT 192
Y K + ++ SL++QT
Sbjct: 176 YAKYTTVQLRHSLTSQT 192
>gi|240139618|ref|YP_002964094.1| hypothetical protein MexAM1_META1p3069 [Methylobacterium extorquens
AM1]
gi|240009591|gb|ACS40817.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 234
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D
Sbjct: 32 GFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRD 91
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +E
Sbjct: 92 EIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVE 151
Query: 138 LQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
L+ + IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 152 LRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSR 211
Query: 197 FITLI 201
F LI
Sbjct: 212 FAVLI 216
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHI---PDHPSVSAIVVLTG-EPIRIERAFELLENQIGEK 64
V ++ + G + F V + P+ P+ AIVVLTG +R++ LLE + GE+
Sbjct: 8 LVVVLLWAAGLLVFADRVIESTPAIEPEEPA-DAIVVLTGASDMRLKEGMRLLERRKGER 66
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+FISGV+ V + L+ + L ECC+D+GY+A NT NA+E + WA ++F +++
Sbjct: 67 LFISGVNRDVKRPELMDVTEGSKRLYECCVDLGYQAENTVQNAREIAEWARGHDFDTLIV 126
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT DYHMPR+ LEL+ FI YP+ + DL K R++++EY K L
Sbjct: 127 VTSDYHMPRSLLELKADMPDAHFISYPVPTADLSARDWWKSGKGARLIVLEYCKYL 182
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 12 LIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
L FFI +GF+ F+ ++ I IVVLTG R+ A ELL G ++ ISG
Sbjct: 15 LGFFIAAVGFVGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLISG 74
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + + +P + CC+D+ Y A+NT NA + WA + F +++VT +Y
Sbjct: 75 VHPTNDANDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLVVVTSNY 134
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR EL ++ IPY ++ + LR+LL EY K + +L L+
Sbjct: 135 HMPRAIAELSHAMPSMDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLRLA 194
>gi|163852283|ref|YP_001640326.1| hypothetical protein Mext_2865 [Methylobacterium extorquens PA1]
gi|163663888|gb|ABY31255.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 283
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D
Sbjct: 81 GFLAFVAVVERTDRPSLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRD 140
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +E
Sbjct: 141 EIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVE 200
Query: 138 LQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
L+ + IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 201 LRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSR 260
Query: 197 FITLI 201
F LI
Sbjct: 261 FAVLI 265
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 19 FISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
F++F V Q P HP AI+VLTG RIE +LL+ ++G ++ ISGV+
Sbjct: 62 FVAFTEKVGQF-TPPHPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTRTHP 120
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ L++ + I L CC+DI ++A+NT GNA+E++ W +KN + + IVT DYHM R+ L
Sbjct: 121 NKLIRIMNINPRLFSCCVDIDHQAINTRGNAEESAHWIKKNRYKTLYIVTDDYHMTRSLL 180
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
E + + + FI YP I D+ + S I ++ +R+L +EY+K + + I++ L
Sbjct: 181 EFKYLMPDINFIAYP-IKQDVAD-SWIKQVNQIRLLALEYIKNISVKIRIIL 230
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G FV + GFI F+ ++ I IVVLTG R+ A ELL G ++
Sbjct: 16 GFFVAAV----GFIGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLL 71
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 72 ISGVHPTNEASDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLIVVT 131
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
+YHMPR +EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 132 SNYHMPRAIVELSHAMPSLDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARL 191
Query: 187 SLS 189
L+
Sbjct: 192 RLA 194
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEP-IRIERAFELLENQIGEKI 65
L V +++F+ G ++F V Q P VS +VVLTG +R+E A +LLE G+++
Sbjct: 8 LIVVMVWFV-GLLAFTSRVDQSTPALEPPVSDGVVVLTGASNVRLEVATKLLEAGKGKRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ S++ +L + + ECC+D+GY A +T GNA E + WA ++ +++V
Sbjct: 67 LISGVNREASREDVLGVTKAVRPIYECCVDLGYAAADTIGNASETAEWARAKDYRSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
T DYHMPR+ LEL V PYP+++ L + R + +EY K L +
Sbjct: 127 TADYHMPRSMLELHASMPGVTLHPYPVVTESLNAHRWWQGGTSARRMTVEYCKYLAI 183
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ I + IVVLTG R+ A ELL G ++ I
Sbjct: 31 LAIGFVGMASGFVVFLSQLRGAEIQPGRNADGIVVLTGGSSRVSDAIELLAAGYGRRLLI 90
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P Q L CC+D+ A+NT NA EA WA + FH +++VT
Sbjct: 91 SGVHPTNGANDISRSLPDSQQLLSCCVDLDRSAINTRSNAAEARRWAHERGFHSLIVVTS 150
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ ++ IP+ ++ ++ R+LL EY K + ++
Sbjct: 151 NYHMPRAIVEMSHAMPDIELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAAEARVR 210
Query: 188 LS 189
L+
Sbjct: 211 LA 212
>gi|306842871|ref|ZP_07475508.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
gi|306286958|gb|EFM58475.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
Length = 162
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 86/138 (62%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+ ALN
Sbjct: 1 MTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDRTALN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ + E S
Sbjct: 61 TVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSW 120
Query: 163 IFKIKILRVLLIEYLKIL 180
+ + LRVL EY+K L
Sbjct: 121 VAEGDTLRVLFTEYVKYL 138
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 10 VCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFI 67
V + ++ G F V+ PD AIV LTG R+ A LLE G+++ I
Sbjct: 9 VVALMWLTGLFVFAERVRGFTPAPDPARADAIVSLTGPSAERVNAAIRLLEQGKGDRLLI 68
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V + L P L CC+D+G++A NT GNAQE +AWA + +++VT
Sbjct: 69 SGVNREVRRQELRALTPGSSKLFNCCVDLGFEAENTVGNAQEIAAWARSKGYDDLIVVTS 128
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
DYHMPR+ LE++ V+ PY + + L+ + R + +EY+K L
Sbjct: 129 DYHMPRSLLEIRGAAPGVRLTPYAVSTPSLDNAGWWRATETARRMTLEYMKYL 181
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF+ F V + + IVVLTG +R+E +L+ +++ ISGV+ V
Sbjct: 20 VFGFVLFSVTVTRDDVGGWDKADGIVVLTGGDLRVEAGAKLMNEGRAKRLLISGVNRKVR 79
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++ + + + + CC+D+GY+AL+T GNA E WA N + ++IVT YHMPR+
Sbjct: 80 REEMQRLLGLDAKTFNCCVDLGYEALDTVGNADETRTWARNNGYTKLIIVTSRYHMPRSL 139
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
EL + V IPYP+ E + RVL+ EYLK L
Sbjct: 140 AELALVMPKVTLIPYPVTPRHFPETAWWLHSSTTRVLVSEYLKFL 184
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IGFVGAAVGFVGFLSQLRGVETKPASNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDNQRLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL + IP+ +I E LR+LL EY K L +++ L+
Sbjct: 154 HMPRAIVELSYAMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVRVRLA 213
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IAFVGAGVGFVGFLSQLRGVETKPVNNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQQLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAAEARVRLA 213
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A +LL G+++ ISG
Sbjct: 34 IAFVGAAVGFVGFLSQLRGVETKPAANADGIVVLTGGSSRISDAVDLLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W + F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQRLLTCCVDLDRSAVNTRSNASETRRWVDGQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPDVTLIPFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAAEARVRLA 213
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ F +GF++F+ + + H IV LTG RI A +LL G ++ I+GV+
Sbjct: 41 LAFGVGFLAFVGCLARTERQPHAPADGIVALTGGAQRIGDAIDLLAAGYGRRLLITGVNE 100
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
S++ + + P +Q L CC+D+ Y+A NT GNA E W +N F V +VT +YHMP
Sbjct: 101 RTSREEIARLNPGQQHLIACCVDLDYRARNTIGNAIETRRWMRENGFRTVAVVTSNYHMP 160
Query: 133 RTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
RT LEL + + +P+P++ + ++ R+L+ EY+K L+ I+ T
Sbjct: 161 RTLLELGHALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVSEYVKFLVAWIRTRFETD 220
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LF + F+ GF F ++ IVVLTG R+ A +LL G+++ I
Sbjct: 28 LFSFFVIFLAGFAWFASQLRSEESKPDRHADGIVVLTGGASRVADALDLLSKGYGKRLLI 87
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + +L+ P Q L +CC+D+ A+NT NA E W ++ FH +++VT
Sbjct: 88 SGVHPANGAADILRAQPESQALLKCCVDLDRSAVNTRSNATETRRWVKERGFHSLIVVTS 147
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +EL + I YP++S +R++ +EY+K L+ +++
Sbjct: 148 NYHMPRATVELTHAMPDIDLIFYPVVSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVRVR 207
Query: 188 LST 190
L+
Sbjct: 208 LAA 210
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
F+ G+++F + + A+V LTG R+ A + L +++ I+GV+ +
Sbjct: 32 FVAGYVAFALSLARQEPILKVEAEAVVALTGGSDRVLDAADFLARGQAKRMLITGVNRAT 91
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI-VTHDYHMPR 133
+L + +P+ +DL CC+D+GY+A++T GNA+E WA+ N LI VT +YHMPR
Sbjct: 92 RSSVLARILPVSRDLFNCCVDLGYQAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPR 151
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL--LLSIQLSL 188
+EL ++ P+P++S ++ + + R++ EY+K L LL +LSL
Sbjct: 152 ALVELSAALPDIKLYPFPVVSEHVDVADWATDLGVARLVGSEYVKFLGALLRTRLSL 208
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
V + F++G F+ ++ Q+ P H + IVVLTG R+ A ELL G+++
Sbjct: 45 VLALGFLVGAGGFVVFLSQLRGAEQKPRH-NADGIVVLTGGSSRVSDAVELLAAGYGKRL 103
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + + + +P +D CC+D+ A++T NA E W ++ F +++V
Sbjct: 104 LISGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVV 163
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR E+ V+ IP+ +I + LR+LL EY K L + ++
Sbjct: 164 TSNYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 223
Query: 186 LSLS 189
+ LS
Sbjct: 224 VRLS 227
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
I+F+ ++ I IVVLTG R+ A ELL G ++ ISGVH + + +
Sbjct: 37 IAFLSQLRGAEIAPDRKADGIVVLTGGSSRVSDAMELLAAGYGRRLLISGVHPTSTASDI 96
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +P Q CC+D+ AL+T GNA EA WA+ F +++VT +YHMPR +E
Sbjct: 97 SRTLPENQSFMTCCVDLDRTALSTRGNAAEARRWAQARRFKSLIVVTSNYHMPRALVEFS 156
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
IP+ ++ E LR+LL EY+K + +++ L F I
Sbjct: 157 HAMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEVRVRL-----EDFGID 211
Query: 200 LIEEIT 205
L E++
Sbjct: 212 LSPEVS 217
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
V + F++G F+ ++ Q+ P H + IVVLTG R+ A ELL G+++
Sbjct: 31 VLALGFLVGAGGFVVFLSQLRGAEQKPRH-NADGIVVLTGGSSRVSDAVELLAAGYGKRL 89
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + + + +P +D CC+D+ A++T NA E W ++ F +++V
Sbjct: 90 LISGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVV 149
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR E+ V+ IP+ +I + LR+LL EY K L + ++
Sbjct: 150 TSNYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
Query: 186 LSLS 189
+ LS
Sbjct: 210 VRLS 213
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
GF F+ +K IVVLTG RI A LL G ++ I+GVH +
Sbjct: 42 GFGLFVAGIKGREAQTARRADGIVVLTGGAERITDATNLLVEGRGTRLLITGVHPDTTLA 101
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+ + +P ++ ECC+++G ALNT GNA E + WA ++ F +L+VT +HMPR +E
Sbjct: 102 EIGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFRSLLVVTSAWHMPRALVE 161
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
L+R V+ +PYP++ EN + +R+L +EY+K
Sbjct: 162 LRRALPDVELVPYPVVPKRGPENWEA-SLANVRLLFVEYVK 201
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVK-QMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKI 65
L + L+ + +G ++F V P+ P +V LTG +R+E A LLE G+++
Sbjct: 7 LLIALMIWGLGLVAFTGRVDLSTPAPEPPEADGVVALTGASSLRLEAATRLLEEGKGKRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + + + +CC+D+G+ A NT GNA E + WA + +++V
Sbjct: 67 LISGVNRETTRADVQSVTKAVKPIYDCCVDLGFTAANTVGNALETAEWARSKGYKSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKIL 180
T DYHMPR+ LEL V+ PYP+ + DL + +K I R +++EY K L
Sbjct: 127 TADYHMPRSMLELSAAMPGVKLFPYPVKT-DLNAH-RWWKTSISARRMIVEYCKYL 180
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKI 65
L + L+ + +G ++F V Q P+ P +V LTG +R+E A LLE+ G+++
Sbjct: 7 LLIALMIWGLGLLAFTGRVDQSTPAPEPPISDGVVALTGASTLRLEAATRLLEDGKGQRL 66
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV+ ++ + + + +CC+D+G+ A NT GNA+E + WA + +++V
Sbjct: 67 LISGVNREATRAEIQAVTKAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIVV 126
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
T DYHMPR+ LEL+ V PYP+ + DL R +++EY K L
Sbjct: 127 TADYHMPRSMLELRAAMPNVVLHPYPVKT-DLNARRWWKTGVSARRMIVEYCKYL 180
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ + + + IVVLTG R+ A ELL G ++ I
Sbjct: 32 LALGFVAVAGGFVAFLAQLHSAELQPRRNAEGIVVLTGGSSRVSDAVELLAAGYGRRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P D CC+D+ A++T NA E W + F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESSDWFSCCVDLDRSAVDTRSNAAETRRWVRERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSDAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LS 189
LS
Sbjct: 212 LS 213
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVH 71
+I F+ GF F + I IVVLTG R+ A +LL G+++ ISGVH
Sbjct: 32 VIIFLAGFAWFAGQLHSEEIKPERHADGIVVLTGGASRVADALDLLSRGYGKRLLISGVH 91
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ +L+ P R+ L CC+D+ A+NT NA E W ++ F +++VT +YHM
Sbjct: 92 PANGTADILRAQPERETLLSCCVDLDRSAVNTRSNATETRRWVKERGFRSLIVVTSNYHM 151
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
PR +EL + I YP++S +R++ +EY+K L +++ L+
Sbjct: 152 PRASVELSHAMPDIDLIFYPVVSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVRVRLAA 210
>gi|254562029|ref|YP_003069124.1| hypothetical protein METDI3633 [Methylobacterium extorquens DM4]
gi|254269307|emb|CAX25273.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 234
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D +++ P
Sbjct: 40 VERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRDEIVRLNPS 99
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INST 144
++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +EL+ +
Sbjct: 100 QEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDG 159
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ + + R+L EYLK L+ + + F LI
Sbjct: 160 ETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSRFAVLI 216
>gi|188582230|ref|YP_001925675.1| hypothetical protein Mpop_2985 [Methylobacterium populi BJ001]
gi|179345728|gb|ACB81140.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 234
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
V+Q P + IV +TG R+ A +LL G+++ ISGV+ ++D +++ P
Sbjct: 40 VEQAERPSLDGIDGIVAMTGGSQRVGDAIDLLAEGHGKRLLISGVNERTTRDEIVRLNPS 99
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INST 144
++ CC+D+ Y+A NT GNA E W ++ F + +VT YHMPRT +EL+ +
Sbjct: 100 QEHWITCCVDLDYRARNTIGNAIETRRWMRRHGFTAIAVVTSSYHMPRTLVELRHALRDG 159
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ ++R+L EYLK L+ + F LI
Sbjct: 160 ETLIPYPVVSDGLDLGRWWADPAVMRLLGAEYLKFLVAWGRTRFEADPEQSRFAVLI 216
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
++ GF F ++++ P IV LTG P RI A++LL+ G ++ I+GVH V
Sbjct: 30 YVAGFFLFTAELERIPPVRVPVADGIVALTGGPDRITAAYKLLQEGKGNRLLITGVHPDV 89
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
S L + +P +CC+D+G+ A NT GNA E + W + N+ +++VT YH+PR
Sbjct: 90 SVASLKEMVPGGSAKFDCCVDLGHMAENTIGNATETAEWVRERNYRSIILVTSTYHLPRA 149
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
LEL R V+ +P+ L + R+L+ EY K LL
Sbjct: 150 RLELARAMPDVEISAFPVFQDTLHLDGWWAYPGTTRLLISEYTKYLL 196
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 8 LFVCLIFF-----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
L +CL F + GFI F +++ +VVLTG RI A ELL
Sbjct: 22 LLLCLAGFLASGFVAGFIGFALSLERAEPILTVQADGVVVLTGGSDRIHEAAELLARGQA 81
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ I+GV+ S + + +P+ + L +CCID+GY+AL+T GNA E WA+
Sbjct: 82 RRLLITGVNKSTRGPEIAKLLPVSRQLFDCCIDLGYEALDTAGNAAETREWAKARGIGGS 141
Query: 123 LI-VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
LI VT +YHMPR +EL V+ P+P++S ++ + + R++ EY+K L
Sbjct: 142 LIVVTSNYHMPRALVELSAALPGVELYPFPVVSEHMQVADWLDDASVARLIGGEYVKYL 200
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + + + IVVLTG RI A +LL G ++ I+GV+ S+D
Sbjct: 47 FLVFVGGLARTEQQPYARADGIVVLTGGAQRIGDAIDLLAAGFGRRLLITGVNERTSRDE 106
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + P +Q L CC+D+ Y+A NT GNA E W +N F + +VT +YHMPRT LEL
Sbjct: 107 IARLNPGQQHLISCCVDLDYRARNTIGNAIETRRWMRENGFRTIAVVTSNYHMPRTLLEL 166
Query: 139 QR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+ S + +P+P++ + ++ R+L EY+K L+
Sbjct: 167 DHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLASEYVKFLV 210
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R + + L+ G F F + V +P + AIVVLTG R+ A LLE
Sbjct: 49 LRVLFVAVVTALLAGTAGQFAMFAQKVANARVPATANADAIVVLTGGHARVNEAVRLLEE 108
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ ISGVH +++ L L +D+ ALNT GNA E + W KN F
Sbjct: 109 GRANRLLISGVHPGTTREQLAAVTASNMPLETNSVDLDRVALNTAGNAVETANWVRKNGF 168
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+L+VT YH+PR +EL V I YP+ S DL+ + + +R+L+ EY+K
Sbjct: 169 SSLLVVTSAYHLPRAKVELAGALPDVSLIAYPVFSKDLKLDHWYREPATMRLLMREYVKY 228
Query: 180 LLLSIQLSL 188
+L +++++
Sbjct: 229 ILARLRITV 237
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
F+ L F++GF F+R + AIVVLTG P R+ A LL++ G ++ IS
Sbjct: 14 FILLTAFVVGFALFVRQARTFTPDASVRGQAIVVLTGGPNRVSTAAALLQDGSGRRLLIS 73
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ + Q L ECC+D G +A +T GNA E +AWA ++ + +++VT D
Sbjct: 74 GVNPDSPPADIAAAAGASQALFECCVDFGLQAADTIGNAAETAAWARQHGYDRIIVVTSD 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
YHMPR LELQ V+ + Y + + R L+EY+K
Sbjct: 134 YHMPRALLELQAAMPDVRLVAYGVPAPAPWSGG-----HEARRWLVEYVK 178
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
Query: 40 IVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY 98
IVVLTG +RI+ LLE + G ++ ISGV+ V ++ LL + L ECC+D+GY
Sbjct: 41 IVVLTGASDMRIKEGMRLLERRKGARMLISGVNREVKREELLPVTEGSKKLYECCVDLGY 100
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
+A T GNA E + WA+ F +++VT DYH+PR+ LE++ V+ YP+ + L+
Sbjct: 101 EAQTTLGNAYEVAEWAKAKGFDDLIVVTSDYHVPRSLLEIKAALPGVKLHAYPVATPTLD 160
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+ RVL++EY K L + + S+ T+S
Sbjct: 161 AREWWKSWRSSRVLIVEYSKYLAILARDIFSSLTSS 196
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 2 RYFWYGLFVCLIFFIMGFISF---IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R F LF+ + + GF+ F + +Q+ P+ A+VVLTG RI +L+
Sbjct: 37 RLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGSARIAEGLDLIA 96
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGV+ S L L +CC+D+ AL+T GNA+E + W
Sbjct: 97 AGKGKRLLISGVNEDTSVAALKAINTNHAPLFDCCVDVERAALDTIGNARETAKWVADKG 156
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT YHMPR+ LE +R + P+ +I L + LR L++EY+K
Sbjct: 157 YSSLIVVTSSYHMPRSLLEFRRTMPKLNIKPHAVILEPLAREGWWKNPETLRFLVVEYVK 216
Query: 179 ILLLSIQLSLSTQTASQFFITLI 201
+ +++ L QT S +++
Sbjct: 217 YVGAAMREYLKPQTISALRGSML 239
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 22 FIRYVKQMHIPD-HPSVSA--IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F ++ Q+ + + PS +A IVVLTG R+ A +LL + G+++ ISGVH +
Sbjct: 42 FAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASE 101
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P +D CC+D+ A NT NA E WA + F +++VT +YHMPR E+
Sbjct: 102 ISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEM 161
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
++ IP+ +I + + LR+LL EY K + + ++ L+
Sbjct: 162 SHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLA 212
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G + ++ GF+ F+ + + IV LTG RI A +LL G ++
Sbjct: 44 GAGLGMLALFAGFLVFVSALARHERTPTDRADGIVALTGGAQRIGDAIDLLAGGYGRRLL 103
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
I+GV+ S+D + + P ++ L CC+D+ Y+A NT GNA E W + F V +VT
Sbjct: 104 ITGVNERTSRDEIARLNPTQRALIACCVDLDYRARNTIGNAIETRRWMRAHRFSTVAVVT 163
Query: 127 HDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+YHMPRT +EL + + + +P+P+++ + + R+L EY+K L+
Sbjct: 164 SNYHMPRTLVELDHALQDSDRVLPHPVVTEAFDADRWWQNPPAARLLASEYMKFLV 219
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 8 LFVCLIFFIMG----FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
L C+ F++G F +F V +P AIVVLTG R+ A LLE
Sbjct: 55 LVACVTVFVVGTTIQFANFANRVSTATVPVSTQADAIVVLTGGQERVSEAVRLLEEGHAG 114
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH ++ + + L E +++ ALNT GNA E + W KN F +L
Sbjct: 115 RLLISGVHPGTTRKQIAVVTASAKPLEEGSVELDRVALNTAGNATETANWVRKNGFDSLL 174
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YH+PR EL V I YP+ + DL+ + K +R+L+ EY+K +
Sbjct: 175 VVTSAYHLPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVAR 234
Query: 184 IQLSL 188
+++++
Sbjct: 235 LRIAV 239
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG RI A +LL G+++ ISGV+ +++ +++ P ++ CC+D+ Y+A N
Sbjct: 1 MTGGAQRIGDAIDLLAGGRGKRLLISGVNERTTREEIIRLNPAQEQWISCCVDLDYRARN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENS 161
T GNA E W ++ F V +VT YHMPRT +EL+ +N+ IPYP+++ LE
Sbjct: 61 TIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPVVTEGLEIER 120
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
R+L EYLK L+ ++ T F LI
Sbjct: 121 WWADPAATRLLGAEYLKFLVAWLRTRFETDPEQSRFAVLI 160
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ IVVLTG R+ A ELL + G+++ ISGVH + + + +P +CCID
Sbjct: 52 NADGIVVLTGGSSRVSDAIELLSSGYGKRLLISGVHRTNGVHDISRTVPDSHRWLDCCID 111
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ A+NT NA EA WA + F +++VT +YHMPR +E+ V+ IP+ ++
Sbjct: 112 LDRSAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRAIVEMSHAMPDVELIPFAVVGD 171
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ R+LL EY K L ++ L++
Sbjct: 172 KWRDEPWWSSGTTFRLLLSEYAKYLAAETRVRLAS 206
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGEPI--RIERAFELLENQIG 62
L + LI+F G ++ V+Q +P P IV LTG RI A LLE+ G
Sbjct: 8 LVLALIWF-AGLFAYAHRVQQSTPARLP--PPADGIVALTGAGSKERIAAAIGLLEDGYG 64
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ +SGV+ S++ + + L +CC+D+G+ A +T GNA+E + W E + +
Sbjct: 65 RRVLVSGVNPEASREDIRNLSRAVRRLYDCCVDLGFTAADTVGNARETAEWTEAMRYRSL 124
Query: 123 LIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
IVT DYHMPR LEL+ + + V+ Y + + L+ + + + R++++EY K L
Sbjct: 125 TIVTADYHMPRAMLELRAVFHGTGVRLSTYAVPTPALKSSHWWRQPRAARLMVVEYCKYL 184
Query: 181 LL 182
+
Sbjct: 185 AI 186
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 7 GLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSV----SAIVVLTGEPIRIERAFELLEN 59
GL + ++ + I +RY + IP P++ +A+VVLTG R++ LL
Sbjct: 20 GLLITVVVLSLATAWTIGLVRYASR--IPTQPTLVEPAAAVVVLTGGSKRMDAGVALLAK 77
Query: 60 QIGEKIFISGVHHSVSKDILLQKIP-----IRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+F+SGV H V + IP + Q +CC+ +GY A +T GNA+E + WA
Sbjct: 78 GTAPVLFVSGVDHRVDPARIRDLIPDAGDSLDQATIDCCVVLGYGASDTLGNARETALWA 137
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+++VT +YHMPR LE V+ +PYP+I D+ ++ L ++
Sbjct: 138 RATERTSLILVTSNYHMPRARLEFTHALPEVRLVPYPVIPPDVRMDAWWRWPGTLGLVAG 197
Query: 175 EYLKILLLSIQLSLS 189
E+ K + +++ L+
Sbjct: 198 EWTKYVFARVRIGLA 212
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
G + + G F + + D AIVVLTG R+ FELL K+F
Sbjct: 39 GALTLAVAWFAGLFLFAAGLPRTPPEDDRQTDAIVVLTGGSERLAAGFELLRAHRARKLF 98
Query: 67 ISGVHHSVSKDILLQ---KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
ISGV+ V LL+ + P DL ECCI +GY A +TEGNA E + W + F +
Sbjct: 99 ISGVYRGVDVQELLRLSRQAP--GDL-ECCIVLGYAADDTEGNAAETALWVRQEGFRSLR 155
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT +YHMPR+ +E +R V I +P+ ++ +++ EY K LL
Sbjct: 156 VVTANYHMPRSLVEFRRALPEVDLIAHPVAPPNVRLEHWWRWPGTASLIVGEYNKFLLAW 215
Query: 184 IQLSLSTQTAS 194
+ L A+
Sbjct: 216 TRALLPVPAAT 226
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 29 MHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
+ + D +V+ A+VVLTG R+ LLE G K+F+SGVH V LL++ +
Sbjct: 37 IRVEDQSTVTDAVVVLTGGAERLNSGIALLEAGRGRKLFVSGVHRGVDLPDLLRQAHVSP 96
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ A CCI +G+ A +T GNA E +AW + F + +VT YHM R+ LEL+R
Sbjct: 97 ERARCCIVLGHAADDTVGNATETAAWMGREGFSSLRLVTAAYHMRRSLLELRRALPDATI 156
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
I +P+ + + +L +EY K L
Sbjct: 157 IAHPVFPDAFKRDQWWRWPGTAHLLAVEYTKYL 189
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 9 FVCL-IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+CL + ++ GF F Y H + IVVLTG RI+R +LE +K+ +
Sbjct: 14 LICLFMLWLGGFWLF--YSFHAHPTNKQVTDGIVVLTGGAGRIDRGLMMLERHQAKKMLV 71
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V + L I L ECC+D+G +A++T NAQE + W N++H V ++T
Sbjct: 72 SGVNRQVKAEELAALYDIPSHLIECCVDLGTQAVDTSSNAQETAEWITLNHYHSVRLITT 131
Query: 128 DYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R EL I ++ + I SH RV +IEY K L
Sbjct: 132 DWHMARARFELSLMIGKDIKVVEDAIPSH-----------AGWRVWIIEYCKYL 174
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
AIVVLTG R+ ELL +K+F+SGV+ V LL+ ECCI +
Sbjct: 56 TDAIVVLTGGRNRLSTGLELLAAGRAKKLFVSGVYDGVEVQELLKLSRHSPTEMECCITL 115
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
GY A +T GNA E + W FH + +VT +YHM R+ LEL V +P+P+++
Sbjct: 116 GYSADSTIGNAYETADWMHDQGFHSLRLVTANYHMRRSLLELSMAMPDVDLLPHPVVAPT 175
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + +L+ EY K+L++ ++
Sbjct: 176 VHLDDWWMWPGTANLLVTEYNKLLVVGLR 204
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L C F GF F+ + P + P IV LTG RI+ + LL GEK+
Sbjct: 12 LLACFAF-AGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGEKLL 68
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV + LL LAE I +GY+A +T GNA E + W N+ +++VT
Sbjct: 69 ISGVDTQTTLGELLPPT-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVT 126
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
YHM R LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 127 ASYHMRRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWL 177
>gi|329114135|ref|ZP_08242897.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
gi|326696211|gb|EGE47890.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
Length = 216
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHS 73
F GF F+ + P + P IV LTG RI+ + LL GE++ ISGV
Sbjct: 40 FAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGERLLISGVDTQ 97
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
+ LL LAE I +GY+A +T GNA E + W N+ +++VT YHM R
Sbjct: 98 TTLAALLPST-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHMRR 155
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 156 ALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWL 199
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
V L+ +++GF F ++ Q P D AIVVLTG RI+R LL++ +++ IS
Sbjct: 8 VTLLGWMLGFAWFAIFLPQ---PLDGRQTDAIVVLTGGAGRIDRGLALLQDGAAKRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + + L CCI +G +A++T NA E + W E+ +F V ++T D
Sbjct: 65 GVDRSVRPVELAAQYKVPERLFSCCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTD 124
Query: 129 YHMPRTFLELQ 139
+HM R+ LEL+
Sbjct: 125 WHMRRSALELR 135
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
GL + L++ ++GFI F ++ + A++V TG RIER E+++ + +
Sbjct: 6 GLAIVLVW-VLGFIWFAGWLPGPAPMER--TDAVIVPTGYAGRIERGLEVVQTDSADTLL 62
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
++GV V + + +D+ ECC+ +G+ A +T GNAQE WAE + + +VT
Sbjct: 63 VTGVDPEVKPGEFAAQFKVPEDVMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRLVT 122
Query: 127 HDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
D+HM R EL+R + V+ I ++ L +LLIEY K L+
Sbjct: 123 SDWHMRRAATELRRQLPGDVKLI-----------KDAVRSEPSLWLLLIEYHKWLV 167
>gi|148555918|ref|YP_001263500.1| hypothetical protein Swit_3011 [Sphingomonas wittichii RW1]
gi|148501108|gb|ABQ69362.1| protein of unknown function DUF218 [Sphingomonas wittichii RW1]
Length = 177
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+I GF++F ++ Q PD + IVV+TG R+ER LLE + +++ ISG V
Sbjct: 13 WIAGFMAFALFLPQ-PAPDGIATDGIVVMTGGRGRVERGLRLLEAKRAKRLLISGADRRV 71
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
L + L ECC+D+G+++++T NA EA+ W + + + +VT D+HM R
Sbjct: 72 RPHELAAQFKAPMALVECCVDLGHESVDTRSNAAEAADWIARRRYRSIRLVTSDWHMVRA 131
Query: 135 FLELQRINST 144
+L+ N+T
Sbjct: 132 RFDLR--NAT 139
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ +G I+ R + M P IVVLTG R++ ELL ++ ISG +
Sbjct: 43 WFLGDIAEERPINPM-----PHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISGAGNGT 97
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I + I +G+ A T GNA+E +AWA +++ +++VT DYHMPR
Sbjct: 98 YLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRA 157
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
LEL R V IP P+ + ++ + +L++L+ E+ K +++ ++L
Sbjct: 158 LLELHRALPGVTLIPEPVRPPAM---TNPGQPHMLKILVTEFCKYIVVRLRLG 207
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF F V M AIV LTG+ RI A LL ++ ISGVH +
Sbjct: 1 MCGFFIFAYSVSIMPSTRLKDADAIVALTGDEERIAAAVRLLSEGKARRLLISGVHKTTR 60
Query: 76 KDILLQKIPIRQD----LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++ R L CC+D+ A NTE NA E + W K + +++VT YHM
Sbjct: 61 APQIMSLTTSRGSRSWSLFSCCVDLD-NAHNTEANAAETTNWVRKRGYRSIIVVTSTYHM 119
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
PR +EL + V+ +PYP+ + L+E + VL EY+K
Sbjct: 120 PRALIELHQAMRDVELVPYPVRAPRLDER-WWRDSRTAWVLWKEYMK 165
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ +G I+ R + M P IVVLTG R++ ELL ++ ISG +
Sbjct: 43 WFLGDIAEERPINPM-----PHAGGIVVLTGGADRVKAGLELLMAGAAPRLLISGAGNGT 97
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I + I +G+ A T GNA+E +AWA +++ +++VT DYHMPR
Sbjct: 98 YLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADYHMPRA 157
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
LEL R V IP P+ + ++ + +L++L+ E+ K +++ ++L
Sbjct: 158 LLELHRALPGVTLIPEPVRPPAM---TNPGQPHMLKILVTEFCKYIVVRLRLG 207
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 38 SAIVVLTGEPIR-IERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
+ +V+LTG R I+ +L G+++ ISG H V K+ L + + +R L CC+D+
Sbjct: 45 TGMVILTGGAGRRIQHGLDLFAQGYGDRVLISGTHPLVDKEDL-EGLGVRDSL-HCCVDL 102
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
G +A T GNA EA WA + + +L+VT D+H+PR LEL+ + + I + +
Sbjct: 103 GPRARTTIGNALEARDWARRRGYDTILLVTSDFHLPRALLELEAVAPELTVIGIAVDTRS 162
Query: 157 LEENSSIFKIKILRVLLIEYLKILL 181
+ + RVL EY+K +L
Sbjct: 163 APSANWMRSPSAWRVLAEEYIKYIL 187
>gi|254292607|ref|YP_003058630.1| hypothetical protein Hbal_0231 [Hirschia baltica ATCC 49814]
gi|254041138|gb|ACT57933.1| protein of unknown function DUF218 [Hirschia baltica ATCC 49814]
Length = 197
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L CL F+SF Q+ P D + A++ LTG RI A E+ ++Q +
Sbjct: 13 LVFCLFLIGYDFVSFSYRAAQLATPQFDTSNPHAVIALTGGSNRIAFAAEIAKDQ-NLPL 71
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
FISGV+ D + + ECC +GYKA T N E + W+ K+ + ++IV
Sbjct: 72 FISGVNREAKPDEVAIAAGVDTAFFECCTTLGYKARTTYENGLEVAQWSTKSGYTRLIIV 131
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
T +YHM R LEL+R V + S ++ ++ ++ + + IE++K
Sbjct: 132 TSNYHMERALLELERAMPNVTLTGLAVASPAIKADAWWTDMRSAKRMGIEWVK 184
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L+ +++GF F ++ + P D AIVVLTG P RI+R L++ ++ IS
Sbjct: 8 LALLGWVLGFAWFAIFLPE---PLDGRRTDAIVVLTGGPGRIDRGIALMQQGAARRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + L +CCI +G +A++T N E + W + ++ V +VT D
Sbjct: 65 GVDRSVRPGELAAQYDAPEALFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLVTTD 124
Query: 129 YHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+HM R+ LEL Q + + + + SH L VL+ EY K LL I
Sbjct: 125 WHMRRSALELTQALPPRIHIVYDAVPSH-----------PSLSVLMREYNKYLLRRI 170
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L+ +++GF F + Q P D AIVVLTG RI+R LL++ +++ IS
Sbjct: 8 LTLLAWMLGFAWFAILLPQ---PLDGRQTDAIVVLTGGAGRIDRGLSLLQDGAAKRMLIS 64
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV SV L + + L CCI +G +A++T NA E + W E+ +F V ++T D
Sbjct: 65 GVDRSVRPAELAAQYDAPERLFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTD 124
Query: 129 YHMPRTFLELQ 139
+HM R+ LEL+
Sbjct: 125 WHMRRSALELR 135
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ IF + F F+ + + P + A++VLTG P RI R E++E + +++F+
Sbjct: 5 LLAAIFLVYAF-GFLGFAMTLPAPAAKTETDAVIVLTGGPGRIARGLEVVEQNMAKEMFV 63
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + ++ + L +CC+ +GY A++T NA E + W ++ F +VT
Sbjct: 64 SGVDPEVKPNEFAEQFEVSSRLMDCCVTLGYLAVDTRSNAGEVAQWMKEKEFTSARLVTT 123
Query: 128 DYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++HM R + E+ + + + + ++SH L L +EY K+L +
Sbjct: 124 NWHMARAYSEVAGTLPAGISIVKDAVVSH-----------PDLATLFLEYNKLLASEVSQ 172
Query: 187 SL 188
L
Sbjct: 173 GL 174
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
L+ GF+ F + H+ PS IVVLTG R+ +LL G + ISG
Sbjct: 38 ALLVLSGGFLWFA--WQSQHVLRAPSHADGIVVLTGGAERVATGLKLLAAGRGSVLLISG 95
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
V S L + I E + +GY+A T GNA E + WA + + V++VT Y
Sbjct: 96 VAKGASLGTLARVAGIDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVIVVTAGY 155
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
HMPR EL+R V I YP H ++ S+ + IL++L EYLK L + LS
Sbjct: 156 HMPRALAELRRAMPDV--ILYPETVHP-DQGGSL--LNILKLLSSEYLKWLGAELHLS 208
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 8 LFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L CL ++ GF FI+ + + P IV LTG R++ LL G
Sbjct: 47 LLTCLALGGLWLAGFAWFIQDASKASV-TAPVCDGIVALTGGEQRVDTGITLLRGGYGHL 105
Query: 65 IFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+ ISGV H ++ + LQ+ + LAE I +G +A +T GNA E + WA N+ H +
Sbjct: 106 LLISGVGPHVTLQHILHLQQESLSSPLAER-ITLGRRATSTIGNAHETAQWARDNHLHRL 164
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
L+VT YH+ R LE+ R+ + +PYP++ L+ + + L ++ EY K L
Sbjct: 165 LVVTAGYHIRRAVLEIHRVAPDLALVPYPVVPLALQ---APLSRRTLFLMFREYNKFL 219
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
D + AIVVLTG R+ +LL +G K+F+SGV V+ D L I +
Sbjct: 38 DQTTTDAIVVLTGGSERLPVGLDLLARGLGRKLFLSGVGVEVTLDDLRAAIVDVPENLRS 97
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ +G+ AL+T GNA+E + W +F + +VT YHMPR+ +E + V+ I +P+
Sbjct: 98 RVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPV 157
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
+++ R++ EY K L+ ++ +LS
Sbjct: 158 FPGSVKQQEWWMWKGTARLMAEEYSKFLVAWLRRTLS 194
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
Y L ++ + +GF F + Q + S A++V TG P RI + ++LE +++
Sbjct: 6 YLLAASVLVWALGFFWFAAALPQPA--EELSTDAVIVPTGGPGRIAQGLQVLEQGQAQRM 63
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++GV V++D + + + +CCI +G +A++T NA E + W N+ + +V
Sbjct: 64 LVTGVDPEVTRDEFAAEFEVDEARMDCCITLGSEAVDTRSNATETAEWVAANDITSLRLV 123
Query: 126 THDYHMPRTFLELQR 140
T D+HM R EL R
Sbjct: 124 TTDWHMRRAAGELDR 138
>gi|103488367|ref|YP_617928.1| hypothetical protein Sala_2890 [Sphingopyxis alaskensis RB2256]
gi|98978444|gb|ABF54595.1| protein of unknown function DUF218 [Sphingopyxis alaskensis RB2256]
Length = 176
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 9 FVCLIF--FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
+ L+F +++GF F + AIVV+TG P RI+RA E LE +++
Sbjct: 5 LISLLFLVWVLGFAWFALLLPLPAP--PQKTDAIVVVTGGPGRIDRALERLEAGDAKRLL 62
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV V L + L +CCI +G+ A +T NA E +AWA++ + + +VT
Sbjct: 63 ISGVAREVKPRELAAEYGRPVALFDCCIALGFDAEDTRSNATEVAAWAKRRKYKSIRLVT 122
Query: 127 HDYHMPRTFLELQR 140
D+HM R E+ R
Sbjct: 123 TDWHMRRAEYEIGR 136
>gi|87198723|ref|YP_495980.1| hypothetical protein Saro_0699 [Novosphingobium aromaticivorans DSM
12444]
gi|87134404|gb|ABD25146.1| protein of unknown function DUF218 [Novosphingobium aromaticivorans
DSM 12444]
Length = 182
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +I + +GFI F ++ + + IVVLTG RI A LL+ G K+ +
Sbjct: 11 LSLLMIAWALGFIWFAVFLPR-PAAEPARTDGIVVLTGGSGRIPHALRLLQTGAGRKLLV 69
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + + L CCI +GY A++T NA E++ W + N V +VT
Sbjct: 70 SGVDREVRPREFAVEYDVPSRLMTCCIVLGYDAVDTRSNAVESARWMQTNRIRSVRLVTT 129
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R +L Q P ++ + E++ + + R+L IEY K++
Sbjct: 130 DWHMRRAAFDL------AQEAPKDLV---IVEDAVVSRPS-FRILFIEYNKLV 172
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ + +GF +F+ + H ++ + AIVV TG RI+R LL+ +++ ++GV
Sbjct: 10 LGWCLGFAAFM--LSLPHPLENNTTDAIVVPTGGAGRIDRGIALLQAHQAKRMLVTGVAP 67
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
V L + L CCID+G +A++T NA+E + W ++ + V +VT D+H+P
Sbjct: 68 GVRPIDLARTYRTAPSLFSCCIDLGLEAVDTRSNAEETARWVREHGYRTVRLVTSDWHLP 127
Query: 133 RTFLEL 138
R +EL
Sbjct: 128 RARMEL 133
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + GF+ F+ V + + D S AIVVLTG R+ +LLE + +++F
Sbjct: 16 LVALAALWSGGFLWFVDEVPRA-VDDQTSHTDAIVVLTGGRERLTTGLDLLEAGLSQRLF 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ V ++Q L E + +GY A +T GNA E + WA ++N + IVT
Sbjct: 75 ISGVYKGVDLAEIIQLGRGHAGLKEAVV-LGYAADDTVGNAIETALWATEHNLRSLRIVT 133
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
YHMPR E + + I +P+ ++ +L EY K L
Sbjct: 134 GAYHMPRALAEFRHALPEITLIAHPVFPDQVKSREWWRWPGTAALLATEYSKYL 187
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W + ++ + +GF+ F + Q A++V TG RI+R E+L+
Sbjct: 3 WRLFLLVVVAYALGFMWFAAALPQPRF--EGETDAVIVPTGAAGRIDRGLEVLDGGKARM 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + + CC+ +G+ A++T GNA E + W +N + +
Sbjct: 61 MLVTGVDPEVRPAEFAAEFEVSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRL 120
Query: 125 VTHDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VT D+HM R EL Q++ + ++ + + S L +L +EY K+L
Sbjct: 121 VTTDWHMRRASGELRQKLPTNIRIVEDAVASE-----------PSLGILFLEYNKLL 166
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLENQI 61
W + I + GF F + P+ P I VLTG P R++ LL
Sbjct: 15 LWLLPALLAILVVAGFALFTGQSRAR--PELPLRQTDGIAVLTGGPQRVDAGLRLLAEGH 72
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAE---CCIDIGYKALNTEGNAQEASAWAEKNN 118
+ ISG + + L ++ + L E + +G +A +T GN QE + WAE
Sbjct: 73 ARALIISGTGRDATLEELARRAGLPDPLPEGFAARVTLGREATSTRGNGQEVAEWAEARQ 132
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+ +VT +HMPR LEL+R V +P+P+
Sbjct: 133 IGSLRVVTAAFHMPRALLELRRTLPGVALVPHPV 166
>gi|162149067|ref|YP_001603528.1| hypothetical protein GDI_3297 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787644|emb|CAP57240.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 197
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 18 GFISFIRYVKQMHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVS 75
GF F R + P P ++ IV LTG RIE + LL G ++ ISGV H+ +
Sbjct: 18 GFAWFFR--DALRPPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHATT 75
Query: 76 KDILLQKIPIRQDLAECC-------IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + P Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 76 GSVASRLQP--QGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+ R +E++R + PYPI L+ + ++ +R++ EY K ++ S+ L+
Sbjct: 134 YHIRRATMEIRRTVPGIVLYPYPIQPPALQ---APLRVASVRLMATEYDKWIMASLGLT 189
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE- 91
DH IVV TG R+ LL + +K+ ISGV V+K +L+Q++ +
Sbjct: 53 DH--TDGIVVTTGGQQRLVEGLNLLVSGTTDKVLISGVGKGVNKAVLVQELNLDDQQVSA 110
Query: 92 --CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
CC+++ Y AL+T GNA A AW + N + +VT +YHMPR + R V
Sbjct: 111 LFCCVELEYGALDTRGNALAARAWIDLNGLKSIRLVTANYHMPRAEIVFSRAIPNVDIHQ 170
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ + + L+ I+R+L EY K
Sbjct: 171 WAVSPNALDVERWWQDPMIIRLLTREYAK 199
>gi|209545186|ref|YP_002277415.1| hypothetical protein Gdia_3070 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532863|gb|ACI52800.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 18 GFISFIRYVKQMHIPDHPSVS-AIVVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVS 75
GF F R + P P ++ IV LTG RIE + LL G ++ ISGV H+ +
Sbjct: 34 GFAWFFR--DALRPPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHATT 91
Query: 76 KDILLQKIPIRQDLAECC-------IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + P Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 92 GSVASRLQP--QGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 149
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YH+ R +E++R + PYPI L+ + ++ +R++ EY K ++ S+ L+
Sbjct: 150 YHIRRATMEIRRTVPGIVLYPYPIQPPALQ---APLRVASVRLMATEYDKWIMASLGLT 205
>gi|330993951|ref|ZP_08317881.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
gi|329758897|gb|EGG75411.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
Length = 201
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC- 93
P IV LTG RIE + LL ++ ISGV ++ L+ +P LA
Sbjct: 27 PRADGIVALTGGQGRIEESVRLLVQGRAGRLLISGVDPHATRGDFLRHLPPPVPLAAWTH 86
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+G +A +T GNA E +AW + H +++VT YH+ R LE+ R V+ PI
Sbjct: 87 TTLGSRATSTLGNADETAAWVREYGLHSLIVVTAGYHIRRAMLEISRTVPGVRLYGDPIR 146
Query: 154 SHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
S L F +R++++EY K LL + +
Sbjct: 147 SPALAHP---FHPATMRLMVVEYDKWLLACLDV 176
>gi|326386450|ref|ZP_08208073.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209111|gb|EGD59905.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
Length = 194
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + ++ +++GF+ F ++ + DH A++ LTG RI+R E+L +++ +
Sbjct: 14 LSLMVLAWLLGFLWFALFLPRPA--DHTRTDAVIALTGGSGRIQRGIEVLRADEAKRMLV 71
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV V + + L CC+ +GY++ +T NA EA+ W + + V +VT
Sbjct: 72 SGVDSEVKPAEFEAEYGVPASLFACCMTLGYESFDTRSNALEAARWIARYDLRSVRLVTT 131
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
D+HM R +L + + + I+ + + S +R+L +EY K L
Sbjct: 132 DWHMRRAAFDLA-VAAPKGLV---IVEDAVPSHPS------MRILFVEYNKFL 174
>gi|296116632|ref|ZP_06835242.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
gi|295976844|gb|EFG83612.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
Length = 227
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVH-HSVSKDILLQK---IPIRQDLAECCIDI 96
V LTG RIE + +L+ ++ ISGV H+ D L + +P+ L +
Sbjct: 58 VALTGGQGRIEASLQLMAQHRARRLLISGVDPHATLGDFLTRAPRVLPLEVWLRTT---L 114
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
G +A +T GNA E + W + H +++VT YH+ R +E+ R V P+ +
Sbjct: 115 GRQATSTLGNADETAQWVRAQDIHSLIVVTAGYHIRRAMMEIARAAPGVTLYPFAVQPPA 174
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
L ++ R+L++EY K LL I + T+
Sbjct: 175 LLHPR---RLATWRLLVVEYDKWLLACIDTARWTR 206
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
PS VVLTG R+ F+LL NQ +K+ ISGV+ + ++ P +L+E +
Sbjct: 39 PSADCAVVLTGGAGRVREGFDLLVNQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDV 98
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ ++ T GNAQ++ E +L+VT HM R++
Sbjct: 99 VLDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSY 139
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 32 PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P AIVVLTG R+E L G+K+F+ GV SV K L Q E
Sbjct: 34 PRDTQADAIVVLTGGRGRVEEGVRLYRAGQGKKLFLIGVDPSVKKRELF------QGDGE 87
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPY 150
+ + + NT NA A K+ + ++T YHM R T L + V P+
Sbjct: 88 GGVYLEQNSRNTLENAIYARDLIMKHKVRSIKLITSRYHMKRSTILFRNALPRYVAIYPH 147
Query: 151 PIISHDLEE----NSSIFKI 166
P+ S +L+E +S FK+
Sbjct: 148 PVDSSNLKEQWWRHSGSFKL 167
>gi|301165835|emb|CBW25408.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 212
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
+ S IVV TG+ RI A +L + IFI+GV+ S D LL+ + I +++
Sbjct: 57 NRSPDLIVVFTGDSGRIPLAVQLAKKYKQSNIFITGVYSKNSVDSLLRPLKIDEEIDTNL 116
Query: 94 IDIGYKALNTEGNA-QEASAWAEKNNFHHVLIVTHDYHMPR 133
+ I Y A NT N E+ +++++HDYH+ R
Sbjct: 117 LTIDYLARNTVENVISTLRHLRERKGNKKIIVISHDYHVMR 157
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 2 RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVV----LTGEPI-----R 49
R+ W G+ +CLIF ++ ++ RY + + DHP +A+V+ +P R
Sbjct: 4 RWLWSGVILCLIFALLIIPFWVQASRY-DDVRVADHPRDAALVLGAALWDSQPSPALRER 62
Query: 50 IERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ A L + I SG +S+ +++ + Q + + + ++ NT+ N
Sbjct: 63 LQMALSLYHKGQVQWIICSGGVGDDGISEAEGMKRYLMEQGVPPKDLLLEEESTNTKENL 122
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---------LELQRINSTVQFIPYPIISHDLE 158
Q + + N+ ++ +VTHDYHM R+ E ++S+V F PY +
Sbjct: 123 QYSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPAPVHSSVLFTPY----YKAR 178
Query: 159 ENSSIFKIKILR 170
E SI K ++ +
Sbjct: 179 ECLSIIKYRLTK 190
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 91 ECCIDIGY---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
E +DI + ++ NT NA +K + HHV +VTH YHMPR+ Q+ TV
Sbjct: 41 ELNVDIAWPEGESRNTWENAHFTKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSP 100
Query: 148 IPYPIISHD------LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+P +S L S + I R+ L EYL +L S++
Sbjct: 101 MPTGQLSQQSSTSYWLNWLPSAGALHISRLALHEYLGLLFYSLK 144
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 1 MRYFWYGLFVCL-IFFIMGFISFIRY------VKQMHIPDHPSVSAIVVLTGEPIRIERA 53
M F+ GLF L IF ++ + F+ + V+Q I + AIVVL G R+E
Sbjct: 1 MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDI----ATDAIVVLAGGRGRVEEG 56
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L + G+ +F+ GV V K L Q+ + LA+ + + + NT NA
Sbjct: 57 IRLFRAKKGKYLFLIGVDPMVRKQELFQERK-GESLADRVV-LENASRNTLENALYGREI 114
Query: 114 AEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
++ + + ++T YHM R T + + + P+P+ + +L+E
Sbjct: 115 IDRKDIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKE 161
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 32 PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P AIVVL G R+E L + G +F+ GV +V K L + P D
Sbjct: 34 PRQVQADAIVVLAGGKGRVEEGVRLFRERRGTWLFLVGVDPTVRKSDLYRPKP--GDPPA 91
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPY 150
+ + + NT NA ++ VL++T YH+ R+ + + + V PY
Sbjct: 92 DNVVLEKLSRNTLENAIYGRDILAEHKVRSVLLITSRYHLKRSAILFRNALAPDVALYPY 151
Query: 151 PIISHDLEE 159
P+ S +++E
Sbjct: 152 PVDSSNVKE 160
>gi|157965010|ref|YP_001499834.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
gi|157844786|gb|ABV85287.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
Length = 171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE LL+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGSALLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + LL++ R + + I K ++ E N ++A + N +++V H
Sbjct: 65 TGIESTEQLKNLLKE---RNVIEQQVILAPSKIMSEEDNIKKAVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L+++ + + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKVIHSSHNIYIVPYPVFS 151
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 7 GLFVCLIFFIMGFI-SFIRYVKQMHIPDH--PSVSAIVVLTGEPIRIERAFELLE-NQIG 62
GL V L G S +R ++ +IP+ P +AIVVL G ++ + G
Sbjct: 44 GLLVLLTSSNSGVSQSLVRSLEWQNIPNGELPKATAIVVLGGGTKAPTPPRPWVDVGEAG 103
Query: 63 EKIFISGVHHSVSKDILL-----------QKIPIRQDLAECCIDIGYK---------ALN 102
++I + + K L ++ P D+ E +++G + +LN
Sbjct: 104 DRILYGALLYKQDKAPWLILSGGRIQWDGKEPPESADMKEIAVEMGVRESAILQDPDSLN 163
Query: 103 TEGNAQEASA-WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDL 157
T NA AE N VL+VT HMPR+ L QR ++ IP P + DL
Sbjct: 164 TYQNAVNVRQILAENNLTGKVLLVTSALHMPRSLLVFQR--QGIEVIPAPTDFLVSQQDL 221
Query: 158 EENSSI 163
+ +++I
Sbjct: 222 QPSTTI 227
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
AIVVLTG R+E +L G+ +F+ GV D L++K + Q + +
Sbjct: 39 ADAIVVLTGGRGRVEEGVKLYRAGQGKLLFLIGV------DPLVKKHELYQGAGAENVYL 92
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISH 155
+ NT NA A K+ + ++T YHM R T L V P+P+ S
Sbjct: 93 EKTSRNTLENAIYARDMIMKHKVSSIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVDSS 152
Query: 156 DLEEN------------SSIFKIKILRVLLI 174
+L+E S +K ILRV +
Sbjct: 153 NLKEEWWNHKGSFKLLFSEFYKYCILRVFFL 183
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 38 SAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG 97
AIVVLTG R+E +L G+ +F+ GV D L++K + + + +
Sbjct: 40 DAIVVLTGGRGRVEEGVKLYRGGRGKLLFLIGV------DPLVKKHELYRGAGAENVYLE 93
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHD 156
+ NT NA A K+ + ++T YHM R T L + + P+P+ S +
Sbjct: 94 KTSRNTLENAIYARDMITKHRVSSIKLITSRYHMKRSTILFRNALPKDIAIYPHPVDSSN 153
Query: 157 LEE 159
L+E
Sbjct: 154 LKE 156
>gi|15893279|ref|NP_360993.1| hypothetical protein RC1356 [Rickettsia conorii str. Malish 7]
gi|229587249|ref|YP_002845750.1| hypothetical protein RAF_ORF1242 [Rickettsia africae ESF-5]
gi|29839740|sp|Q92FX1|Y1356_RICCN RecName: Full=Uncharacterized protein RC1356
gi|15620500|gb|AAL03894.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022299|gb|ACP54007.1| Unknown [Rickettsia africae ESF-5]
Length = 171
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 23 IRYV-KQMHIPDHPSVSAIVVLTGEPI--RIERAFELLENQI--GEKIFISGVHHSVSKD 77
+RY+ K + P VS ++++ P R E+A +LL+ EK +S + V +D
Sbjct: 19 LRYIYKHLDQGQAPQVSDLIIVAEGPAVERAEKAVQLLKAAYSRAEKNIVSPRYTDVGED 78
Query: 78 ILL---QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ Q R++L E +A +T NA + + +H ++VT DYHM RT
Sbjct: 79 LFAGYQQLGAERENLIEEN-----QATSTWTNATTSLDLMDDLGYHSAIVVTSDYHMRRT 133
Query: 135 FLELQRINSTVQF 147
L QR N F
Sbjct: 134 RLAFQRANRDYGF 146
>gi|157829194|ref|YP_001495436.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933919|ref|YP_001650708.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
gi|157801675|gb|ABV76928.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909006|gb|ABY73302.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
Length = 171
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFVGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|51474043|ref|YP_067800.1| hypothetical protein RT0866 [Rickettsia typhi str. Wilmington]
gi|51460355|gb|AAU04318.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 174
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 8 LFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + L+ F + G + Y+ + + + +AI+V G +IE LL+ +
Sbjct: 6 LLIILVIFTLWVGGFCYYLYLINSYKLNSNTTNAIIVFAGGGHKIETCIALLKAGYAPIL 65
Query: 66 FISGVHHSVS-KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
FI+G+ + K++L++ I Q + I K ++ E N ++A + N +++
Sbjct: 66 FITGIESAEHFKNLLMEHNVIEQQV----ILAPNKIMSEEDNIKKAIDFIVTYNLTFIIL 121
Query: 125 VTHDYHMPRTFLELQRI---NSTVQFIPYPIIS 154
V H+Y++P +LQ+ ++ V +PYP+ S
Sbjct: 122 VEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFS 154
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 62 GEKIFI-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
G ++F SG ++++ LL IP + L E ++LNT+ NA S EK+
Sbjct: 124 GGQVFGDSGNEANIAQRQLLGLGIPAKDILIEN------RSLNTQQNAVYTSQILEKHQL 177
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDL-----EENSSIFKIKILRV 171
++VT +HMPR LE QR + VQ I YP + S L + + S +
Sbjct: 178 TRPVLVTSAFHMPRAALEFQR--AGVQAIAYPTDYLASEKLSLYAGKLSPSAGAMSTTGT 235
Query: 172 LLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 236 ALKEYLGILALKLK 249
>gi|238651121|ref|YP_002916979.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
gi|238625219|gb|ACR47925.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
Length = 171
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIISEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIIS 154
+Y+MP +L++ ++ + +PYP+ S
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFS 151
>gi|293607329|ref|ZP_06689669.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814279|gb|EFF73420.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 184
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 41 VVLTGEP-----IRIERAFELLENQIGEKIFISGV-------HHSVSKDILLQK-IPIRQ 87
V+ TG+P R++RA++ +F+SG +V +D L+ + +P +
Sbjct: 41 VLPTGQPSPRLAARLDRAYDCYAAMQCRLVFVSGGVDPAGADEAAVMRDYLIARGVPAER 100
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + D N+ A+ ASA+ ++ + L+VT +H+PRT L L+R
Sbjct: 101 IVTDSAGD------NSWATARHASAYMREHGYTRALVVTQYFHVPRTVLALRR 147
>gi|34581055|ref|ZP_00142535.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262440|gb|EAA25944.1| unknown [Rickettsia sibirica 246]
Length = 171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 9 FVCLIFFI-MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
F+ IF + +G + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 5 FLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPI 152
+Y+MP +L++ ++ + +PYP+
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPV 149
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 20/160 (12%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-I 94
SV A LT RI A L + +KI +G +LL DLA+ I
Sbjct: 95 SVKARPELTDSADRITDAIRLYKAGKVKKILFTG-----GSGLLLSDTYREADLAKSLFI 149
Query: 95 DIGYK---------ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
D+G K + NT NA E + NF L++T +HM R+ Q+ N V
Sbjct: 150 DLGVKEEDIILENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNV 209
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
P+P +S F++ + YL + LSI+
Sbjct: 210 --FPFPTDYRSFNTDSGAFELYLPSA---GYLDLTTLSIK 244
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 84 PIRQDLAECCIDIGY---------KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
P +D+A+ D+G ++LNT NA ++ +F VL+VT HMPR+
Sbjct: 154 PESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRKILDQRDFPKVLLVTSAIHMPRS 213
Query: 135 FLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL 172
L +R + IP P + H+L+E SS + +L L
Sbjct: 214 VLVFRR--QGIDVIPAPTDFLVSQHELDEPSSSSQAALLHSL 253
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+T GNA EKN F +++VT YHMPR+ + Q+ + + IPYP
Sbjct: 151 DTLGNAFFVKKICEKNGFKRIILVTSAYHMPRSVIVFQK--AGLDVIPYP 198
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 4 FWYGLF----VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
F+ G+F + L+ + F+ F + D S AIVVL G RIE L
Sbjct: 3 FFRGIFSLLVISLVVIAVLFVDFTYKTFSLRQRDVKS-DAIVVLAGGRGRIEEGVRLYRE 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+F+ GV +V K L + R + + + + + NT NA A ++N
Sbjct: 62 NRARWLFLIGVDPAVRKGELFTE--RRGERSGEGVFLENVSRNTLENALYAREMIVRHNV 119
Query: 120 HHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
+ ++T YHM R T + Q + + P+P+ S +L+E
Sbjct: 120 SSIKLITSRYHMKRATLIFRQVLPKDIAIYPHPVDSKNLKE 160
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS--VSKDILLQ 81
++++ +P H V IVVL GE R+ A EL + ++F+SG + + +++
Sbjct: 36 WLREESMPGHADV--IVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMA 93
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+P + EC ++ NT NA+ + + ++VT YH R +R+
Sbjct: 94 GVPAERIGHEC------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRV 147
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
V + + D S F I +L EYLK +++
Sbjct: 148 WPEVAWGARGVFPGDTLAKS--FPIYESGSILAEYLKRAWYAVR 189
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS--VSKDILLQ 81
++++ +P H V IVVL GE R+ A EL + ++F+SG + + +++
Sbjct: 36 WLREESMPGHADV--IVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMA 93
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+P + EC ++ NT NA+ + + ++VT YH R +R+
Sbjct: 94 GVPAERIGHEC------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRV 147
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
V + + D S F I +L EYLK
Sbjct: 148 WPEVAWGARGVFPGDTLAKS--FPIYESGSILAEYLK 182
>gi|91204866|ref|YP_537221.1| hypothetical protein RBE_0051 [Rickettsia bellii RML369-C]
gi|157826504|ref|YP_001495568.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
gi|91068410|gb|ABE04132.1| unknown [Rickettsia bellii RML369-C]
gi|157801808|gb|ABV78531.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
Length = 174
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 7 GLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L + IF I GF+ ++ Y+ + P + +AI+V G +IE LL+
Sbjct: 6 ALTILTIFAIWASGFVYYL-YLVNSYKPSSNTANAIIVFAGGGHKIETGIALLKAGYAPI 64
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+FI+G+ S LL++ L + I + ++ E ++AS + K N V +
Sbjct: 65 LFITGIETSDQLKNLLKE---NNVLEQQVILAPNQIMSEEDYIKKASDFILKYNITSVRL 121
Query: 125 VTHDYHMPRTFLELQRI----NSTVQFIPYPIIS 154
V ++Y +P L N+ + PYP+I+
Sbjct: 122 VAYNYDIPSIVNNLTTAISSSNNNIYIAPYPVIA 155
>gi|282857535|ref|ZP_06266763.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584622|gb|EFB89962.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 259
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
R+ +A E+L K+ +SG+ + L +P + L E ++LNTEGN +
Sbjct: 109 RLRKAREILSCCGDGKLLLSGIESPLMARWLRASLPREKVLLE------TRSLNTEGNLR 162
Query: 109 EASA-----WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
E++ ++++ + V +VT +HM R + ++ + +P P S
Sbjct: 163 ESAVLLRRLYSDERSRPQVFLVTDRFHMARAWRWAKKFMPDFEVVPSPAPS 213
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 31 IPDHPSVSAI-VVLTGE-PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIR 86
+ D P+ + + VVL+G+ R+E AF L + + +++ +SG ++ +++ LL++ +
Sbjct: 59 VADKPAPAEVLVVLSGDRGERLEYAFRLYQEGLADRLLLSGGPLYADLTEADLLRRHALM 118
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT---FLELQRINS 143
+ E I + +A NT NA + E ++++ YHM R F E+ R S
Sbjct: 119 LGVPEYKIIMEPRATNTYQNALYSREMMEYYGLDSAIVISSPYHMRRVRALFDEVYR-GS 177
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++ + P+ + RV+L EYL++ +L
Sbjct: 178 DIRLVYLPVEDSWFDPERWWESAAGRRVVLAEYLRLTML 216
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 30 HIPDHP--SVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
+ P+ P V AIVVL GE R+ A L E + ++ IS H + +D +
Sbjct: 33 NAPEDPLRPVDAIVVLGGENDGRVPYAVSLAEQGLARQVVISNPHDA--RDPSTNEGCAT 90
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
D + T G AQ A +N + VL+V+ YH+PR QR
Sbjct: 91 TDPRFTVTCVAPHPATTRGEAQFTRTLAVQNGWTSVLVVSWRYHLPRARYIFQR 144
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY----PIISHDL 157
+T GNA+ + +++ + +VTH +HMPR +R +V P PI +H L
Sbjct: 170 DTSGNARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHLL 229
Query: 158 EENSSIFKIKILRVLLIEYLKI 179
+ S ++ R++L E L +
Sbjct: 230 QWLPSAQGLQASRLVLRECLGL 251
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 37 VSAIVVLTGEPIRIERAF---ELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAE 91
V AIVVL PI +RA EL + K+F+SG + + K++ + +E
Sbjct: 110 VDAIVVLGRGPISGDRAAVAAELWQAGRAPKVFVSGRGDAPYLVKELRKYGVSASALASE 169
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
C + TE NAQ + + H+L++T HM R+++ +R+ Q IP+
Sbjct: 170 DC------SQTTEENAQFTARLLQPQGVQHILLITDSPHMLRSWMTFERVG--FQVIPH 220
>gi|67459774|ref|YP_247398.1| hypothetical protein RF_1382 [Rickettsia felis URRWXCal2]
gi|67005307|gb|AAY62233.1| Uncharacterized conserved protein [Rickettsia felis URRWXCal2]
Length = 174
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+G + + Y+ + + + +A++V G +IE LL+ +FI+G+ +
Sbjct: 17 VGGLGYYLYLINSYKLNSNTTNAVIVFAGGGHKIETGIALLKAGYAPILFITGIESTEQL 76
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL++ R + + I K ++ E N ++A + N +++V H+Y+MP
Sbjct: 77 KNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLTSIILVEHNYNMPFMLN 133
Query: 137 ELQRI---NSTVQFIPYPIIS 154
+L++ ++ + +PY + S
Sbjct: 134 KLEKAIPSSNNIYIVPYLVFS 154
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 34/190 (17%)
Query: 18 GFIS--FIRYVKQMHIPDHP--SVSAIVVLTG--EPIRIERAFELLENQIGEKIFISGVH 71
G+I+ +R ++ ++P P AIVVL G +P R + + + G++I
Sbjct: 26 GWIAQNLVRSLETQNLPPTPIPQTRAIVVLGGGIKPALPPRPWVEV-GEAGDRILYGSQL 84
Query: 72 HSVSKDILL-----------QKIPIRQDLAECCIDIGYK---------ALNTEGNAQEAS 111
+ K L P D+AE +G +LNT NA
Sbjct: 85 YRQGKAPWLILSGGRVEWKGGGPPESADMAEIAQAMGVPTSAILQDPTSLNTYQNAVNVR 144
Query: 112 AWAEKNN-FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKI 166
+ NN +L+VT HMPR+ L QR ++ IP P I D+E + S F+
Sbjct: 145 KILKDNNILGPILLVTSALHMPRSLLIFQR--QGIETIPAPTDFSITQQDMEASQSSFQA 202
Query: 167 KILRVLLIEY 176
+L +L Y
Sbjct: 203 VLLNLLPDAY 212
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
LF+ I F +GF+ + +P AI++L G RI A E I+
Sbjct: 6 LFLGFILFWIGFVPLRLAIAHQQ---YPQPQAILLLEGHRQRIPFAAEFWNQHPTLPIWF 62
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G ++ Q+I + + I ++ +T N + + HHV ++T
Sbjct: 63 TGSRTDRPRN---QRIFQQAGVPAEMIHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITS 119
Query: 128 DYHMPRT 134
DYHMPR
Sbjct: 120 DYHMPRA 126
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 31/176 (17%)
Query: 4 FWYGLFVCLIFFIM----GFISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIERAFELL 57
WY V F I G + F+ + + +P H AIVVL G R+E A E
Sbjct: 34 LWYAALVLWAFSIPTVADGLMHFVEGNRTVALPQTLH-QADAIVVLGGMIRRVEGAAEGE 92
Query: 58 ENQIGEKIFISGV---------------------HHSVSKDILLQKIPIRQDLAECCIDI 96
N ++ F +GV +V + LL + +++ + E + +
Sbjct: 93 WNDAADR-FEAGVTLYRAGKAPLLLFTRGRMPWSPDAVPEGELLVERALQRGVPEAALGL 151
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
NTE A + + + +++VT YHM R+ L + +V+ PYP+
Sbjct: 152 TAPVANTEDEAADVARLLRERGAERIILVTSAYHMRRSQLLFEHTGLSVE--PYPV 205
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++RA + +N + +IF+SG + ++ +++ + + I + L+T
Sbjct: 55 RLDRARQCYDNGLCHQIFVSGGIDKQGTDEARAMEDYLVKRGIPKERIVMDNMGLDTWDT 114
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ ASA+ + ++ L+VT +H+PR L L+R
Sbjct: 115 VRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFG 150
>gi|15604704|ref|NP_221222.1| hypothetical protein RP875 [Rickettsia prowazekii str. Madrid E]
gi|7388444|sp|Q9ZC92|Y875_RICPR RecName: Full=Uncharacterized protein RP875
gi|3861399|emb|CAA15298.1| unknown [Rickettsia prowazekii]
gi|292572540|gb|ADE30455.1| hypothetical protein rpr22_CDS854 [Rickettsia prowazekii Rp22]
Length = 174
Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS- 75
+G + Y+ + + + +AI+V +IE LL+ +FI+G+ +
Sbjct: 17 VGGFGYYLYLINSYKLNSNTTNAIIVFADGGHKIETCMALLKAGYAPILFITGIESTERF 76
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
K++L++ I Q + I K ++ E N +EA + N + +V H+Y++P
Sbjct: 77 KNLLMKHNVIEQQV----ILAPNKIMSEEDNIKEAINFIVTYNLTLITLVEHNYNIPFML 132
Query: 136 LELQRI---NSTVQFIPYPIIS 154
+LQ+ ++ V +PYP+ S
Sbjct: 133 NKLQKAIPSSNNVYIVPYPVFS 154
>gi|296139977|ref|YP_003647220.1| hypothetical protein Tpau_2273 [Tsukamurella paurometabola DSM
20162]
gi|296028111|gb|ADG78881.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 188
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFIS---GVHHSVSKDILL 80
Y++ I + AIVVL G P R E L E + ++ +S G S + +
Sbjct: 34 YIRPRTIDELRPADAIVVLGGNPYDRFEYGITLAERGLAPQVVLSNSVGAQDSRMQQLCD 93
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+++P Q C + + + T G AQE A++ + +++VT H+ R L+R
Sbjct: 94 ERVPDVQ--VTCFLPVPW---TTRGEAQELRRLAQERRWDEIIVVTTTAHVERARFILER 148
Query: 141 IN-STVQFIPYP 151
+ + +Q +P
Sbjct: 149 CSRAQLQMTDFP 160
>gi|239946686|ref|ZP_04698439.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920962|gb|EER20986.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 171
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + +I+GF + Y+ + + + +AI+V G +IE +L+
Sbjct: 2 IRKFLLTILAIFALWIVGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAMLKAG 60
Query: 61 IGEKIFISGVHHSVS-KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+FI+G+ + K++L + I Q I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAGQLKNLLKEHSVIEQQ----VILAPNKIMSEEDNIKKAVDFIVTYNL 116
Query: 120 HHVLIVTHDYHMPRTFLELQRI---NSTVQFIPYPI 152
+++V H+Y+MP +L++ ++ + + YP+
Sbjct: 117 TSIILVEHNYNMPFMLNKLKKAIPSSNNIYIVSYPV 152
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGV 70
+I F+ G + + + P V AIVVL GE R L E + + +S
Sbjct: 17 VILFLNGASGTLLFARAQADP-LAKVDAIVVLGGEHDGREAYGVGLAEQGYADTVLLSNP 75
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKAL---NTEGNAQEASAWAEKNNFHHVLIVTH 127
+H ++ + R D+ C KA T G A A A AE +++ +++V+
Sbjct: 76 YHGTDA-VMAEACQPRSDIEVIC-----KAPVPGTTRGEALMARALAEARDWNSIIVVSW 129
Query: 128 DYHMPRT 134
YH+PR
Sbjct: 130 RYHLPRA 136
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 28 QMHIPDHPSVSAIVVLTGEP----IRIERAFE------LLENQIGEKIFISGVHHSVSKD 77
+ +P+ AIVVL G I E + + +L + G I +SG ++
Sbjct: 65 KYSVPEKFQADAIVVLGGGSYSTGILKEDSMKRLLTALILHKRTGLPIVLSGGAENLPDA 124
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+++ + + + + I ++ +TE NA ++ N+ V++VT YH+PR
Sbjct: 125 EIMKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLVTSAYHLPRAVFL 184
Query: 138 LQRINSTVQFIPYPI-ISHDLEEN 160
++ +V IPYP DL N
Sbjct: 185 FKKEGLSV--IPYPTDFKRDLRYN 206
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 38 SAIVVLTGEPI---RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR-QDLAECC 93
AIVVL G + RI+ A L + I + + I G VS+ + +K+ + Q++
Sbjct: 3 DAIVVLGGGKLSEGRIDEAIRLYKQGIAKYLIIVGGKEEVSE--MYKKVRSKIQNIENVY 60
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+D +L+T NA A EK N +LIVT ++H+ R
Sbjct: 61 VD--NNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIKRAL 100
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L V LI + F+ F + D + AIVVL G R+E L + G +++
Sbjct: 12 LIVVLIIVAVLFVDFAYKTFSLRQRD-VTTDAIVVLAGGRGRVEEGVRLFRERKGTYLYL 70
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCID---IGYKALNTEGNAQEASAWAEKNNFHHVLI 124
GV V K L R E D + + NT NA + + +
Sbjct: 71 IGVDPVVKKRDLF-----RDREGERLADRVFLENLSRNTLENALYGREIIMRKEVRSIRL 125
Query: 125 VTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEEN 160
+T YHM R T L Q + + P+P+ + +L+E
Sbjct: 126 ITSRYHMKRATLLFRQVLPRDIAIYPHPVDTTNLKER 162
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFE 55
+ LFV L+ +++G ++I +V + AI+VL P+ RI +
Sbjct: 17 WRLFVVLVIWLLGVTAWIVWVGERD--QAAKADAIIVLGAAAYDAKPSPVFEERIRHGLD 74
Query: 56 LLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L E Q + +G + S+ + ++ ++ + + I I + NT N EA
Sbjct: 75 LYEAQYAPLLIFTGGYGGSGARFSESQVARRYALKHGVPDDAILIETASRNTVQNLIEAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
++ N H V+IV+ HM R
Sbjct: 135 RLMDQRNLHRVIIVSDPLHMARAL 158
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 31 IPDHPSVSAIVVLTGEPI------------------------RIERAFELLENQIGEKIF 66
+P+HP I++L G I R+ R + L G ++F
Sbjct: 77 VPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLYGLPILLSGGQVF 136
Query: 67 I-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +++ +L+ +P Q E ++L T NA+ ++ + F H ++
Sbjct: 137 KDTGTEAEIARRVLISLGVPEEQIYTES------ESLTTRQNARYSAEILHREGFTHPIL 190
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L +++ ++ PYP
Sbjct: 191 VTSAFHLPRAVLNFEKLG--IEVTPYP 215
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ AIVVL G RIE L +F+ GV SV K L ++ + + + +
Sbjct: 38 NCDAIVVLAGGRGRIEEGSRLYRENHARWLFLIGVDPSVRKSDLFRE--RKGERSGEGVY 95
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI-NSTVQFIPYPIIS 154
+ + NT NA A N + ++T YHM R L + + + P+P+ +
Sbjct: 96 LEKVSRNTLENALYAREMIVGRNIDSIELITSRYHMKRATLIFRHVLPKDIAIYPHPVDT 155
Query: 155 HDLEE----NSSIFKIKILRVLLIEYLKILLLSI 184
+L+E +S F R+L E+ K L +
Sbjct: 156 KNLKEEWWNHSGSF-----RLLFSEFYKYCLFRV 184
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---------------RIERAFELLEN 59
F + F+S Y+K+ +IPD S ++++V+ G I R+ + FE+
Sbjct: 54 FFVYFLSKSFYIKEKNIPD--SQNSVIVILGGGITFFDGKYEVGNHTLKRLLKGFEIYR- 110
Query: 60 QIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ I ISG + +S+ +++ I + + I + KA T+ NA S +
Sbjct: 111 KTNAPIIISGGVIGKGISESAIMKDILVTFGVNINDIIVEDKARTTKENAIFVSKLLKGK 170
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPI 152
NF ++++VT HM R+ + ++ S IP YPI
Sbjct: 171 NFENIILVTSFLHMKRSIMLFEKY-SKKNIIPIVCDYPI 208
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 31 IPDHPSVSAIVVLTGEPI------------------------RIERAFELLENQIGEKIF 66
+P+HP I++L G I R+ R + L G ++F
Sbjct: 77 VPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLYGLPILLSGGQVF 136
Query: 67 I-SGVHHSVSKDILLQ-KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +++ +L+ +P Q E ++L T NA+ ++ + F H ++
Sbjct: 137 KDTGTEAEIARRVLISLGVPEEQIYTES------ESLTTGQNARYSAEILHREGFMHPIL 190
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L +++ ++ PYP
Sbjct: 191 VTSAFHLPRAVLNFEKLG--IEVTPYP 215
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISH 155
++LNT+ NA S +++ ++VT +HMPR LE QR + +Q YP + S
Sbjct: 157 RSLNTQQNAVYTSKILKQHQLTKPILVTSAFHMPRAALEFQR--AGMQTTAYPTDYLASE 214
Query: 156 DL-----EENSSIFKIKILRVLLIEYLKILLLSIQ 185
L + + S I L EYL IL L ++
Sbjct: 215 KLSLYAAKLSPSAGAISTTGTALKEYLGILALKLK 249
>gi|85001627|ref|XP_955525.1| hypothetical protein [Theileria annulata]
gi|65303671|emb|CAI76049.1| hypothetical protein TA17430 [Theileria annulata]
Length = 223
Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 53 AFELLEN-------QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG----YKAL 101
+FE+LE G K+F + S++ ++ I + Q C+++G + +
Sbjct: 84 SFEILEYLQDHDELAAGRKLFEDLASTNESRNSEIENIYVGQ-----CVNLGLPEMFPCV 138
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF-LELQRINSTVQFI---PYPIISH-D 156
+ G + + +FH V+++ +D MP F L QR+ +F+ YP+ S
Sbjct: 139 SLSGTMEVTRSRNRTEDFHKVIVLLYDVRMPSMFPLVYQRLGYKCEFMVTYTYPVDSGVG 198
Query: 157 LEENSSIFK--IKILRVL 172
+ EN IF+ +K +RVL
Sbjct: 199 ISENKKIFEDIVKTIRVL 216
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL--TGEPIRIERAFELLEN--QIGE 63
+F+CL+ + S+ + + I + P S ++++ E +R RA ELL
Sbjct: 15 VFMCLVIGV----SYPIIINNLIIDEGPVQSDVIIVPEGQEYVRAYRAAELLHEGFSTSG 70
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+I +S + + + + Q + E KA +T NA E++ F +
Sbjct: 71 QIIVSPIDKATVQGYKEFWVSQEQIIPET------KATSTYENAVITLRMMEEHGFDSAI 124
Query: 124 IVTHDYHMPRTFLELQRINSTVQF 147
IV+ DYHM RT L +RINS F
Sbjct: 125 IVSSDYHMRRTKLIYERINSDYDF 148
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +RQ + I + + T NA+ SA E + + +++VT Y
Sbjct: 106 HSATEADTYLPYL-LRQQVPRADIVLENSSRTTYENARNVSAILEGSRYDSLILVTSAYQ 164
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R F P P+IS+
Sbjct: 165 MPRAMLDFHRFG----FAPQPMISN 185
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI 94
S AI VL G+P R + A EL + I++S G + ++ + Q + +
Sbjct: 28 SPQAIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFSQA-----GVPRSRL 82
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPI 152
+ Y+A +T N + ++ HV +VT DYHM R + + + + F P P+
Sbjct: 83 HLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRALVIANIVFASRGITFEPVPV 142
Query: 153 ISHDLEEN 160
S E+
Sbjct: 143 PSDRASES 150
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECC 93
P AI++L G P R E E + ++++S GV + +I Q DL
Sbjct: 46 PEPQAILMLGGNPNREEFTAEFAKKHDHLEVWVSSGVDRRTATEIFQQA---GVDLGRVH 102
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI---NSTVQFIPY 150
+D Y+A++T N +K + HV ++T D+HM R + + I + + F P
Sbjct: 103 LD--YRAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRA-MAIASIVFGSQGIAFTPV 159
Query: 151 PIISHDLEENSSI 163
PI + S +
Sbjct: 160 PIPTQGYPSESEV 172
>gi|119509608|ref|ZP_01628755.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
gi|119465797|gb|EAW46687.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
Length = 198
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ L CL F + +R + HP AI++L+G+ R + E+ + I
Sbjct: 8 FTLAGCLGMFTIATAIPLRLAIALQQKPHPQ--AILMLSGDSSRPKFTREMAQEFPDLPI 65
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIG------YKALNTEGNAQEASAWAEKNNF 119
++S V + IL DL + G +A +T N A ++NN
Sbjct: 66 WVS-VGDPEIRSIL-------DDLDNQGLQGGDRIQYDNRATDTVTNFTTIVAKVQQNNI 117
Query: 120 HHVLIVTHDYHMPRT 134
HV +VT DYHMPR+
Sbjct: 118 RHVYLVTSDYHMPRS 132
>gi|157826367|ref|YP_001494087.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
gi|157800325|gb|ABV75579.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
Length = 174
Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+G I + Y+ + + + +AI+V G +IE LL+ +FI G+ +
Sbjct: 17 VGGIGYFLYLINSYKFNSNTTNAIIVFAGGGHKIETGIALLKAGYAPILFIIGIESTEQL 76
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL++ R + + I K ++ E N ++A + N V++V ++Y+MP
Sbjct: 77 RNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLASVILVEYNYNMPFMLN 133
Query: 137 ELQR---INSTVQFIPYPI 152
+L++ ++ + + YP+
Sbjct: 134 KLEKEIPSSNNIYIVQYPV 152
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFE 55
+ LFV L+ +++G ++I +V + AI+VL P+ RI +
Sbjct: 17 WRLFVLLVIWLLGVTAWIVWVGERD--QAAKADAIIVLGAAAYDAKPSPVFEERIRHGLD 74
Query: 56 LLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L E + + +G + S+ + ++ ++ + + I I + NT N EA
Sbjct: 75 LYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGIPDDAILIETASRNTVQNLVEAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTF 135
E+ + H V+IV+ HM R
Sbjct: 135 RLMEQRDLHRVIIVSDPLHMARAL 158
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 10 VCLIFFIMGFISFIR---YVKQMH-------IPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+CL F + R Y++Q H + PS + + + R++ A L +
Sbjct: 6 ICLFFLFASCYPYHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSRIQKQRMDHAITLYQK 65
Query: 60 QIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+KI ISG V + + +++ I Q++ E I + A NT N + A+ K+
Sbjct: 66 GSIQKILISGAAVANCFIEAEVMKDYAIAQNVPEKDILLEKYAKNTYENLKYAADLCNKH 125
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
+F +IVT +H+ R Q+ + F YP+ +EN F + LR+
Sbjct: 126 HFSKTIIVTSGFHIRRAGFFAQKFLTDFTF--YPVSE---KENQRYFITEYLRM 174
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++R E +I +SG + I+++ + L I + K + T +
Sbjct: 63 RLDRTLECYRAGYFPEIIVSGGIGKEGYDEAIVMRDYLVAHGLPGEHILLDNKGVTTFAS 122
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
A+ A++ NFH V +++ +H+PR L L R T +
Sbjct: 123 ARNTRDIAQQRNFHSVFVISQYFHLPRARLALHRFGFTTVY 163
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 22/157 (14%)
Query: 12 LIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVL------TGEPI--------RIERAFE 55
LI ++GFI + M P+ +A VL G+P R++ A
Sbjct: 3 LILIVIGFIYLLIVAAFMFSGARAKPNGNADTVLVLGARVNGDPAEPSSVLKERLDTAVA 62
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L K+ +SG S S+ ++++ + Q +A I++ K+ TE N + +
Sbjct: 63 YLNENPTLKVIVSGGQGEDESASEASVMEEYLVNQGIARNRINVEDKSTRTEENLKYSKG 122
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
K N +IVT DYHM R + +R +P
Sbjct: 123 ---KFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLP 156
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELLE-NQIGEK 64
L VC ++ S +R ++ ++P +P + AIVVL G ++ ++ G++
Sbjct: 48 LLVCSNAWVAK--SLVRSLEWQYLPPNPVPNAEAIVVLGGATKSAYPPRPTVDLSETGDR 105
Query: 65 IFISGVHHSVSKDILL----QKIPIR-------QDLAECCIDIGYKA---------LNTE 104
+ + + +K ++ +I R D+A IG + LNT
Sbjct: 106 VIYAAQLYRQNKAPIIILSGGRIDWRGGGESESADMANVLTSIGIPSEVIVQEPDSLNTY 165
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR--INSTVQFIPYPIISHDLEENSS 162
NA E VL+VT HMPR+ QR IN+ + + +L+E SS
Sbjct: 166 QNAVNVKKILESRGIGKVLLVTSAMHMPRSIQIFQRQGINAIAAPTDFLVSQGELQELSS 225
Query: 163 IFKIKILRVL 172
K IL +L
Sbjct: 226 TPKAAILNLL 235
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 8 LFVCLIFFIMGFISFIRY-VKQMHIPDHPSVS-AIVVL-------TGEPI---RIERAFE 55
L V LIF + I+ + Y + + P S AI+VL T P R+E A +
Sbjct: 7 LVVVLIFALFSIIAILAYQIVSFGFTEKPKKSDAIIVLGCAVYGDTPSPFFKERLEEALK 66
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + G I ISG S+S+ ++ + + +A I + K+ +T N +
Sbjct: 67 LYKEGYGHYIIISGGKGPGESISEAEAGKRYLLEKGVASKNILLDNKSFSTYENLLFSKE 126
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
EKN+ +IV++ +H+ R + +RI F
Sbjct: 127 IMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 34 HPSVSAIVVLT------GEPI--------RIERAFELLENQIGEKIFISG---VHHSVSK 76
PS +A VL GEP R++ A + L ++ +SG S ++
Sbjct: 33 KPSDNAKTVLILGAKVIGEPAQPSHVLQERLDAAVDYLNEHPKARVIVSGGQGTDESETE 92
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++++ + + + ID K+ TE N + EK +IVT DYHM R +
Sbjct: 93 ASVMEEYLVNEGIRRARIDTETKSKRTEENISNSK---EKFQLEKTVIVTSDYHMYRALM 149
Query: 137 ELQRINSTVQFIP 149
+R N +P
Sbjct: 150 LAKRQNIDATGLP 162
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 65 IFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ISG H+ S+ + + I + + E I + ++LNT NA +K+ F+
Sbjct: 122 IIISGGQIPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNK 181
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
++VT +HM R + ++ + V IPYP D + NS
Sbjct: 182 PILVTSAFHMKRAVKQFEK--NEVNVIPYPT---DYQTNS 216
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
N + AS+ H ++VTH YHMPR L Q + + + P+P+
Sbjct: 163 NIKNASSILRSLELKHAVLVTHGYHMPRAHLIAQGLAPEINWHPFPV 209
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 38.1 bits (87), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 120 HPATEADTYLPYL-LREQVPRSDIVLENRSLTTYENARNVSAIVGQSRYDSLILVTSAYH 178
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 179 MPRALLDFRHFG----LEPQPLIS 198
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 33 DHPSVSAIVVLTG----------EP-------IRIERAFELLENQIGEKIFISG--VHHS 73
+ P+ AIVVL G EP RI++A L + Q I +SG + +
Sbjct: 74 NAPTAQAIVVLGGHTANGRQNWFEPYDKATAIARIDKAANLYKAQRAPLIVVSGAALEGN 133
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
VS+ ++ + D+ E I + ++ T NA + + + ++L+VT HMPR
Sbjct: 134 VSEAQIMANALKQHDIPESAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTSALHMPR 193
Query: 134 TF 135
Sbjct: 194 AM 195
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 38.1 bits (87), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R ++A E L+ +F++G + V + +++++ + + E I + K+ NT
Sbjct: 110 RSDKAIEYLKEYPHLNVFLTGGQGIDEKVPESVIMKEYFLENGIDENRIFLEDKSTNTNE 169
Query: 106 NAQ-EASAWAEKN-NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
N + A + + +H++L+VT D+HMPR + + N TV YP+ S
Sbjct: 170 NIKFYIDALKDTDMEYHNILLVTSDFHMPRAGVIARHYNLTV----YPLCS 216
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 8 LFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVLTGEPI-----------RIERAFE 55
L V LIF + I+ + Y + + P S +++ G + R+E A +
Sbjct: 7 LVVVLIFALFSIIAILAYQIISFGFTEKPKKSDAIIVLGCAVYGDAPSPFFKERLEEALK 66
Query: 56 LLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + G I ISG S+S+ ++ + + +A I + K+ +T N +
Sbjct: 67 LYKEGYGRYIIISGGKGPGESISEAEAGKRYFLEKGVASKNILLDNKSFSTYENLLFSKE 126
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
EKN+ +IV++ +H+ R + +RI F
Sbjct: 127 IMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R+ L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRSELLCQK 159
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ S + + ++++T Y
Sbjct: 143 HRATEADTYLPYL-LRRQVPRADIVLENRSLTTYENARNVSGIVHGSRYDSLILITSAYQ 201
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R T P P+IS+
Sbjct: 202 MPRALLDFHRFGLT----PQPMISN 222
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|59323997|gb|AAW84264.1| heterogeneous nuclear ribonucleoprotein L [Aplysia californica]
Length = 237
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+F + G + I+++K SA++ L G+PI +ERA L N F + +
Sbjct: 49 LFCLYGNVVRIKFLKSKE------GSAMIQL-GDPISVERAIANLNNVF---FFGNKLQL 98
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
S+SK LQ++P +LA+ + YK + N A+KN V H ++
Sbjct: 99 SMSKQAFLQEVPNPHELADGTLS--YKDFMGNRNNRFTNPEAAQKNRIQSPSKVLHFFNA 156
Query: 132 PRTFLE 137
P T E
Sbjct: 157 PPTITE 162
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI 94
S AI VL G+P R + A EL + I++S G + ++ + Q + +
Sbjct: 28 SPQAIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFGQA-----GVPRSRL 82
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ Y+A +T N + ++ HV +VT DYHM R +
Sbjct: 83 HLDYQATDTLSNFTSLADRFQQQGIQHVYLVTSDYHMRRALV 124
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+F+ L FI+ +S I + P AI+ L G P R E E + I++
Sbjct: 1 MFLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGGSPEREEFTAEFAKKHPHLDIWV 60
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + Q +++ + + Y A++T N + N+ H+ ++T
Sbjct: 61 SSGIPPKQAQAIFQN----ANISNHRLHLDYLAVDTVTNFTSLVDDFKHNHIQHIYLITS 116
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEEN 160
YH+PR L + + F P PI S E+
Sbjct: 117 AYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRES 151
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +RQ + I + + T NA+ SA E + + ++++T Y
Sbjct: 143 HRATEADTYLPYL-LRQQVPRADIVLENSSRTTYENARNVSAVLEGSRYDSLILITSAYQ 201
Query: 131 MPRTFLELQRINSTVQFIPYPIISH 155
MPR L+ R P P+IS+
Sbjct: 202 MPRAMLDFHRFG----LAPQPMISN 222
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQ-DL 89
D P V+ L P L+ ++G I +SG ++ ++ + + +++ +
Sbjct: 32 DTPDVTGTGTLCSIPANRLLTAVRLQKKLGIPIIVSGGQIYEDSGREADIARRILKELGV 91
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+E I + ++LNT NA+ ++ + + L+VT +HM R + ++ V IP
Sbjct: 92 SEDMILLENRSLNTTQNAEYSTNILKSRKYKQPLLVTSAFHMERAVVNFNKLG--VDVIP 149
Query: 150 YP 151
YP
Sbjct: 150 YP 151
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 34 HPSVSAIVVL------TGEPI--------RIERAFELLENQIGEKIFISG---VHHSVSK 76
PS +A VL TG P R++ A L K+ +SG S ++
Sbjct: 33 KPSENADTVLILGAKVTGTPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATE 92
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
++++ + + +A I+ K+ TE N + ++A K N +IVT DYHM R +
Sbjct: 93 ASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALM 149
Query: 137 ELQRINSTVQFIP 149
+R +P
Sbjct: 150 LAKRQGIDASGLP 162
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 49 RIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A L N + +SG SV++ ++++ + + +A I+ K+ TE
Sbjct: 62 RLDAAVVYLNNHPKVSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEE 121
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
N ++ EK +IVT DYHM R + +R N V +P
Sbjct: 122 NISNSN---EKFELGKTVIVTSDYHMYRALMLAERQNIDVSGLP 162
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 65 IFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ISG H+ S+ + I + + E I + ++LNT NA +K+ F+
Sbjct: 122 IIISGGQIPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNK 181
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
++VT +HM R + ++ + V IPYP D + NS
Sbjct: 182 PILVTSAFHMKRAVKQFEK--NEVNVIPYPT---DYQTNS 216
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 120 HAATEADTYLPYL-LREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYH 178
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 179 MPRAMLDFRHFG----LEPQPLIS 198
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 30 HIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIR 86
+ +P+V ++V+ R++ A L K+ +SG S ++ ++++ +
Sbjct: 47 KVKGNPAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN 102
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +A I+ K+ TE N + ++A K N +IVT DYHM R + +R
Sbjct: 103 EGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRGLMLAKRQGIDAS 159
Query: 147 FIP 149
+P
Sbjct: 160 GLP 162
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 64 KIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ +SG H + D L + +RQ + I + + T NA+ S ++++
Sbjct: 132 QVIVSGGNPQRHSATEADTYLPYL-LRQQVPRSDIVLEKSSRTTYENARNVSVIVGQSHY 190
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQ 146
+++VT YHMPR L+ QR Q
Sbjct: 191 DKLILVTSAYHMPRALLDFQRFGVEPQ 217
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 49 RIERAFELLENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ R FELL ++ +SG V D+LL+++ E + G ++ N
Sbjct: 107 RVLRGFELLHEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEG-RSRN 165
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T NA E++ ++ + +L+VT HMPR
Sbjct: 166 TRENAVESARIIQERGWKSLLLVTSAAHMPRA 197
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------RIERAFEL 56
+V L F ++ + FI K+ S ++ G P R+E+A EL
Sbjct: 10 YVVLCFVLINVLIFITVFKKTQKRQKQSKYDCAIVCGFPANSDGSPSLIMKSRVEKAIEL 69
Query: 57 -LENQIGEKIFISG-VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
N+I IF G VH++ + +++K I L + I KA++T N +
Sbjct: 70 YCHNKIDYIIFSGGKVHNTYEEAAIMEKYAISLGLDKKIIIKENKAISTFHNLLYCTEIM 129
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
++NF+ L+VT+ +H+ +
Sbjct: 130 NEHNFNSCLVVTNGWHLRKA 149
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 64 KIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ +SG H + D L + +RQ +A I + + T NA+ SA ++++
Sbjct: 82 QVIVSGGNPQRHSATEADTYLPYL-LRQQVARSDIVLEKTSRTTYENARNVSAIVGQSHY 140
Query: 120 HHVLIVTHDYHMPRTFLELQ 139
+++VT YHMPR L+ Q
Sbjct: 141 DTLILVTSAYHMPRALLDFQ 160
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLGLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHI---------PDHPSVSAIVVLTGEP----- 47
R F F L+ MG+ S++ V+Q+++ D +V +G P
Sbjct: 23 RRFLLWCFCFLVLAAMGWSSWV--VRQINLVAAQDQAQPADAIAVFGAAEYSGRPSPVYH 80
Query: 48 IRIERAFELLENQIGEKIFISG---------VHHSVSKDILL-QKIPIRQDLAECCIDIG 97
R++ A L QI + G V +D LL IP + +AE
Sbjct: 81 ARLDHAVTLYRKQIAPIVITFGGGSDKDSGKTEGGVGRDYLLANGIPFDKIIAET----- 135
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+++TE + + AE+NN H+++V+ + H+ R +R V P P + H
Sbjct: 136 -HSVDTEQQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVYTSPRPALGH 192
>gi|307592076|ref|YP_003899667.1| hypothetical protein Cyan7822_5740 [Cyanothece sp. PCC 7822]
gi|306985721|gb|ADN17601.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 205
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDIL-LQKIPIRQDLAEC 92
P A +L G+ R E EL + +I++S G + +K++ + +P R
Sbjct: 40 PQPQAFFILGGDFRREEVVAELAKWYPSLEIWVSSGPNTQKTKELFQMAGVPPR------ 93
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ I +A++T N A +K + H+ +VT DYHMPR
Sbjct: 94 LLHIDARAIDTVTNFTSLVADFKKKHIQHLYLVTSDYHMPRA 135
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L + G+ I +SG ++S+ +QK +++ L + I K+ NT
Sbjct: 65 RLDEGLRLYNDGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
H + D L + +R+ + I + ++L T NA+ SA ++ + +++VT YH
Sbjct: 106 HPASEADTYLPYL-LREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYH 164
Query: 131 MPRTFLELQRINSTVQFIPYPIIS 154
MPR L+ + P P+IS
Sbjct: 165 MPRALLDFRHFG----LDPQPLIS 184
>gi|83309135|ref|YP_419399.1| hypothetical protein amb0036 [Magnetospirillum magneticum AMB-1]
gi|82943976|dbj|BAE48840.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 526
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLA 90
+++A V L G + RA E+LE++IG ++ G H+ S Q + +DLA
Sbjct: 192 AIAAAVCLPGHRAGLARALEVLEHEIGRQVLPDGCHYERSPSYHFQVLGDLEDLA 246
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R + L + G+ I +SG S+S+ +++ + + + I + K+ +T
Sbjct: 60 RTDEGLRLFKEGYGKYIIVSGGKGQGESISEAEAMKRYLVSKGVDSSKIILEDKSASTMA 119
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N + + EK NF +IV++ YH+ R L
Sbjct: 120 NLINSKSIMEKKNFKTAIIVSNKYHLKRASL 150
>gi|223939730|ref|ZP_03631602.1| protein of unknown function DUF218 [bacterium Ellin514]
gi|223891601|gb|EEF58090.1| protein of unknown function DUF218 [bacterium Ellin514]
Length = 343
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ A +L + + +K+ SG SV + + ++ ++ + I LNT+
Sbjct: 207 RVRTACQLYRDGLVKKLIFSGGPGDGSVHETESMTRMAVQLGVKPQDILTDRAGLNTQAT 266
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ N H+L+V+H YH+PR + +R V +P
Sbjct: 267 VNNTERLFSQINARHILVVSHFYHLPRIKMAYRRDGWDVYTVP 309
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAE 91
P+V ++V+ R++ A L K+ +SG S ++ ++++ + + +A
Sbjct: 52 PAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIAR 107
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ K+ TE N + ++A K N +IVT DYHM R + +R +P
Sbjct: 108 KRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 35 PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAE 91
P+V ++V+ R++ A L K+ +SG S ++ ++++ + + +A
Sbjct: 52 PAVPSLVLQE----RLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVNEGIAR 107
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I+ K+ TE N + ++A K N +IVT DYHM R + +R +P
Sbjct: 108 KRIETETKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLP 162
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ + + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N + + E NN +IV++ YH+ R L Q+
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQK 159
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 16 IMGFISFIRYVKQMHIPDH--PSVS----AIVVLTGEPIRIERAFELLENQIGEKIFISG 69
I G + ++ + H+ D P S A ++ E IR+ R + G K+ +SG
Sbjct: 75 IEGTVDYVMVLGNGHVVDDSIPPTSELTRAALMRLSEGIRVMRMYP------GAKLILSG 128
Query: 70 VHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+S +L K+ + +A+ I + A +T A++A+A+ ++ ++VT
Sbjct: 129 YAGGSEMSHARMLAKVALALGVAKSDIILLETAQDTWEEARQAAAFVQQRTL---VLVTS 185
Query: 128 DYHMPRTFLELQRINSTVQFIPYP 151
HMPR E Q T IP P
Sbjct: 186 ASHMPRAMNEFQSAGLTP--IPAP 207
>gi|119188591|ref|XP_001244902.1| hypothetical protein CIMG_04343 [Coccidioides immitis RS]
Length = 1264
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M I A V G+ PI +ER +++ +G +
Sbjct: 1100 FFVLGLISTSRHGLEMLI--EAGWDAPVDYKGQSLGSCMPINLERMYKISFGPVGSNSKV 1157
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA-------WAEKNNFH 120
+G + K + PI Q + +D+G L+ A S + + F
Sbjct: 1158 NGTANQRYKSAVTDSDPINQKILNLLVDMGNTVLSKRAAADLQSIKTKHPDHFRQTQLFR 1217
Query: 121 HVLIV--THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ L++ +H + +P L + +V + ++ DLE +S
Sbjct: 1218 NTLVILESHHFRLPARRFALDLFDKSV--MGRIVLEDDLELDS 1258
>gi|258575787|ref|XP_002542075.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902341|gb|EEP76742.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1247
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M + A V G+ P+ +ER +++ N +G K
Sbjct: 1083 FFVLGLISASRHGLEMLV--EAGWDAPVDYKGQSLGSCMPVNLERIYKIPFNSVGPKAET 1140
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA-------QEASAWAEKNNFH 120
+GV + + PI Q + D+G L A + + + F
Sbjct: 1141 NGVSDERYRSAVTDSDPINQKILNLLADMGNTVLTKRAAADLQRIKLKHPDNFRQTQLFR 1200
Query: 121 HVLIV--THDYHMPRTFLELQRINSTV 145
+ LI+ +H + +P L + +V
Sbjct: 1201 NTLIILESHHFRLPARRFALDLFDKSV 1227
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 12 LIFFIMGFISFIRYVKQMHIPDHPSVSAIVV---LTGEPI------RIERAFELLENQIG 62
+I +G S I Y + MH +AI++ L G I R+ER + E
Sbjct: 82 IIILFLGLQSCILY-QGMHTDKQQGEAAIILGAQLHGSSISRLLRYRLERGIQFAEEYPN 140
Query: 63 EKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ +SG + S+ +++ I+ +AE I + ++NT+ N + EK +
Sbjct: 141 TYLIVSGGKGQAETCSEASAMKQYLIQHGVAESRILMEDASMNTQENLAFSKVLMEKYHI 200
Query: 120 HHVLIVTHDYHMPRT 134
I+T+D+HM R
Sbjct: 201 KSASIITNDFHMFRA 215
>gi|262376749|ref|ZP_06069977.1| flavoprotein [Acinetobacter lwoffii SH145]
gi|262308459|gb|EEY89594.1| flavoprotein [Acinetobacter lwoffii SH145]
Length = 400
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT--EGNAQEASAWAEKNNFHHVLIV 125
SG+ + ++K P R L G+K + T GNA EA+ E N+F L+
Sbjct: 175 SGIGYEIAKQFGHHVYPTRAGLVPFTFSDGFKEVTTRLSGNAVEATLSNELNSFTEALLF 234
Query: 126 THDYHMPRTFLELQRI-----NSTVQFIPYPIISHDLEENSSIFKIK-------ILRVLL 173
TH + L+L + V F+P S DL + FK K +LR LL
Sbjct: 235 THRGLSGPSSLQLSNYWNVGQSFKVDFLP----SVDLLD---FFKSKKQSQPKVLLRTLL 287
Query: 174 IEYL-KILLLSIQLSLSTQTA 193
EYL K ++ +Q + T++A
Sbjct: 288 NEYLPKSVVAELQSIIWTESA 308
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+A+NT NA+ A+A + +VTH +HMPR + + +P P D
Sbjct: 156 RAMNTHENARNAAAILSAEGIERIYLVTHAWHMPRALRSFE--AEGLDVVPAPTGFRD 211
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-------EPI---RIERAFELLENQIG 62
IFF+ ++FI +VK P S IVVL P+ RI++A +L +
Sbjct: 150 IFFVTNILNFIHFVK-------PRYSYIVVLGAGLNGTEVTPLLASRIDKAIKLWRRRPQ 202
Query: 63 EKIFI----SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ I G +S+ ++ +RQ + + I + ++ NT N + EK
Sbjct: 203 DVTLIMSGGQGPDEVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFSYKLMEKGR 262
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+IVT+ YH+ R+ + +R+ Q
Sbjct: 263 -EDFVIVTNYYHLLRSLILARRLGLKCQ 289
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 30/170 (17%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTG-----EPIRIERAFELLENQIGEK-IFISGVHH 72
+S RY I D+P V AIVV+ G +P R R F + G++ I + ++H
Sbjct: 1 MVSLERYHPSQDITDYPMVQAIVVIGGCLESAKPPR--RTFNV--GDAGDRVIHAARLYH 56
Query: 73 SVSKDILL--------QKIPIRQDLAECCID---IGYKALNTEG-------NAQEASAWA 114
+ ++L +K+P D ++ + KA+ +E NA +
Sbjct: 57 AGKAPLILVSGGTLPWRKVPPEADAMRAFLEELGVPTKAVMSEPDSITTYENALFSKKLL 116
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ H +L+VT +HM R+ +++ + IP P ++ S+F
Sbjct: 117 DNKGIHKILLVTSAFHMRRSAAVFRKVG--FEVIPAPTDFRVVKNPPSLF 164
>gi|221115165|ref|XP_002163743.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
Length = 1322
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 61 IGEKIFISGVHHSVSKDILLQKIPI----RQDLAECCID--IGYKALNTEGNAQ----EA 110
IG K+FI H S D L+K+ R+D C + K+++ E NAQ ++
Sbjct: 729 IGCKVFICDFHREQSWDRWLKKLSSGCSNRKDDILCILRRLAWSKSIDEEENAQRILEQS 788
Query: 111 SAWAEKN--NFHHVL--IVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFK 165
W++++ F + ++ M + R + S + P+ + H L + S++
Sbjct: 789 EFWSQESFTKFKQYIENYTDSNFKMDARYRRYARWVPSYLYNRPHSFVKHCLIKKSNVEN 848
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEITV 206
+ + V++I++ +LS ST+ A+++F++ +EIT+
Sbjct: 849 LDLSGVIMIKHGVFAVLS-----STKPATKYFVSFGDEITM 884
>gi|303323717|ref|XP_003071850.1| Hr1 repeat family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111552|gb|EER29705.1| Hr1 repeat family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320031794|gb|EFW13752.1| sterility protein Ste20 [Coccidioides posadasii str. Silveira]
Length = 1309
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 14 FFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------PIRIERAFELLENQIGEKIFI 67
FF++G IS R+ +M I A V G+ PI +ER +++ +G +
Sbjct: 1145 FFVLGLISTSRHGLEMLI--EAGWDAPVDYKGQSLGSCMPINLERMYKISFGPVGSNSRL 1202
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA-------WAEKNNFH 120
G + K + PI Q + +D+G L+ A S + + F
Sbjct: 1203 HGTANQRYKSAVTDSDPINQKILNLLVDMGNTVLSKRAAADLQSIKTKHPDHFRQTQLFR 1262
Query: 121 HVLIV--THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+ L++ +H + +P L + +V + ++ DLE +S
Sbjct: 1263 NTLVILESHHFRLPARRFALDLFDKSV--MGRIVLEDDLELDS 1303
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 20/152 (13%)
Query: 1 MRYFWYGLFVCL--IFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTG-------EPI 48
+RY YG + + IF + + ++ Y +P H A VVL P+
Sbjct: 7 LRYLRYGFLLSILSIFALQAWCAWQVYQYAHAPAALPKH--ADAAVVLGAAAWGDKPSPV 64
Query: 49 ---RIERAFELLENQIGEK-IFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ EK IF G S+ + +K ++Q + I ++ +
Sbjct: 65 FRERINHAIALYQSERVEKLIFTGGTRKEGYPSEGEVARKFALKQGIPSHDIIYETRSKD 124
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N +K+ HHV+IV+ YHM R
Sbjct: 125 TYQNLVNTRLLMQKHKLHHVIIVSDPYHMARA 156
Searching..................................................done
Results from round 2
>gi|254780579|ref|YP_003064992.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040256|gb|ACT57052.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ
Sbjct: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH
Sbjct: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL
Sbjct: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
LLSIQLSLSTQTASQFFITLIEEITVK
Sbjct: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 109/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIG+ A++T GNA+E S W +
Sbjct: 92 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPRT EL ++ ++FIPYP+++ DL+ + +RV+L EYLK+L
Sbjct: 152 SVLVVTNNYHMPRTLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYLKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LAGAR 216
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 107/183 (58%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 96 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 108/183 (59%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 14 WGGFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKGAG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + DL CC+DIG+ A++T GNA+EAS W N + V
Sbjct: 74 KRLLISGVHPTTTPRQIRRMTQGSADLFSCCVDIGHDAIDTIGNAEEASNWIHANGYRSV 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY+K+LL
Sbjct: 134 IVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYVKVLLA 193
Query: 183 SIQ 185
+
Sbjct: 194 GAR 196
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 106/183 (57%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+ G
Sbjct: 36 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAG 95
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 96 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 155
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 156 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 215
Query: 183 SIQ 185
+
Sbjct: 216 GAR 218
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 108/185 (58%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ + + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 34 LRWGGFACLLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGGYQRIDQAVELLQKG 93
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH + + + + DL CC+DIGY A++T GNA+EAS W +
Sbjct: 94 AGKRLLISGVHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHTKGYR 153
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K+L
Sbjct: 154 SVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVKVL 213
Query: 181 LLSIQ 185
L +
Sbjct: 214 LTGAR 218
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 107/183 (58%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +G + + GF+ F V + P P AIVVLTG RI++A ELL+ +G
Sbjct: 34 WGGFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGVG 93
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ ISGVH + + + + +L CC+DIG+ AL+T GNA+E S W + V
Sbjct: 94 KRLLISGVHPTTTPAQIRKMTQGSANLFSCCVDIGHDALDTIGNAEETSNWIHAKGYRSV 153
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL
Sbjct: 154 LVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLA 213
Query: 183 SIQ 185
+
Sbjct: 214 GAR 216
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 107/185 (57%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R+ + + + GF+ F V + P P AIVVLTG RI++A ELL+
Sbjct: 32 LRWGGFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGGYQRIDQAVELLQKG 91
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISG H + + + + DL CC+DIGY A++T GNA+EAS W +
Sbjct: 92 AGKRLLISGAHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHAKGYR 151
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VLIVT++YHMPR+ EL ++ ++FI YP+++ DL+ + +RV+L EY+K+L
Sbjct: 152 SVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVKVL 211
Query: 181 LLSIQ 185
L +
Sbjct: 212 LTGAR 216
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 66/170 (38%), Positives = 101/170 (59%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
GF+ F V + P P AIVVLTG RI++A ELL+ G+++ ISGVH + +
Sbjct: 2 FGGFLRFADSVTTLKPPVEPKADAIVVLTGGYQRIDQAVELLQKGAGKRLLISGVHPTTT 61
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + DL CC+DIG+ A++T GNA+E S W + VL+VT++YHMPR+
Sbjct: 62 PAQIRKMTQGSADLFSCCVDIGHDAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSL 121
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
EL ++ ++FIPYP+++ DL+ + +RV+L EY K+LL +
Sbjct: 122 AELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYAKVLLTGAR 171
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 104/185 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+RY Y + + + + GF+ F V M P P AIVVLTG RI++A +LL
Sbjct: 38 LRYGGYAILLLMACLVAGFLHFADDVTAMMPPAEPKADAIVVLTGGYQRIDQAVDLLRKG 97
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGVH S S + + DL CC+D+GY+A++T GNA E + W F
Sbjct: 98 SGRRLLISGVHPSTSPATIRKMTQASPDLFACCVDMGYRAIDTIGNANETAQWIHDKGFS 157
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT +YHM R+ +EL+R + QFIPYP+++ DL + LR L+ EY KIL
Sbjct: 158 SVLVVTSNYHMRRSLMELRRTDHETQFIPYPVVTADLRTRAWYADPNALRTLMSEYAKIL 217
Query: 181 LLSIQ 185
+ +
Sbjct: 218 IAYTR 222
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 117/207 (56%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L F+ GF+ F V + P P AIVVLTG RIE+A ELL++
Sbjct: 35 LRRGFFVLLAFLAVFVAGFLYFADTVASLQPPAAPKADAIVVLTGGFQRIEQAVELLKSG 94
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ + + + + DL +CC+DIG++A++T GNA EA W + +
Sbjct: 95 AGNRLLISGVNPATTGSQIRRNTQSSADLFKCCVDIGHEAVDTIGNATEAGQWIHDHGYR 154
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
VL+VT++YHMPR+ LEL+R+ +FI YP+++ DL+ ++ + + ++ +L+EY K
Sbjct: 155 SVLVVTNNYHMPRSLLELRRVRPDTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAKYS 214
Query: 181 LLSIQLSLSTQTASQFFITLIEEITVK 207
+ ++ + A I K
Sbjct: 215 IAFLRDFANAHLADSSRTDTAPPIQAK 241
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IGFVGAAVGFVGFLSQLRGVETKPASNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDNQRLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL + IP+ +I E LR+LL EY K L +++ L+
Sbjct: 154 HMPRAIVELSYAMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVRVRLA 213
Query: 190 TQTASQFFITLIEEI 204
+ L EI
Sbjct: 214 -----YLGLELAPEI 223
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 93/185 (50%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
LF + F+ GF F ++ IVVLTG R+ A +LL G+++
Sbjct: 26 RFLFSFFVIFLAGFAWFASQLRSEESKPDRHADGIVVLTGGASRVADALDLLSKGYGKRL 85
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + +L+ P Q L +CC+D+ A+NT NA E W ++ FH +++V
Sbjct: 86 LISGVHPANGAADILRAQPESQALLKCCVDLDRSAVNTRSNATETRRWVKERGFHSLIVV 145
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR +EL + I YP++S +R++ +EY+K L+ ++
Sbjct: 146 TSNYHMPRATVELTHAMPDIDLIFYPVVSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVR 205
Query: 186 LSLST 190
+ L+
Sbjct: 206 VRLAA 210
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ I + IVVLTG R+ A ELL G ++ I
Sbjct: 31 LAIGFVGMASGFVVFLSQLRGAEIQPGRNADGIVVLTGGSSRVSDAIELLAAGYGRRLLI 90
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P Q L CC+D+ A+NT NA EA WA + FH +++VT
Sbjct: 91 SGVHPTNGANDISRSLPDSQQLLSCCVDLDRSAINTRSNAAEARRWAHERGFHSLIVVTS 150
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ ++ IP+ ++ ++ R+LL EY K + ++
Sbjct: 151 NYHMPRAIVEMSHAMPDIELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAAEARVR 210
Query: 188 LSTQTASQFFITLIEE 203
L+ F L+ +
Sbjct: 211 LA-----GFGAELMPD 221
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 100/183 (54%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
+ + + GF+ F + + P P AI+VLTG RI++A ELL G
Sbjct: 37 WGGFAFVFLVAIVFGGFLHFADSITTLKPPLEPKADAIIVLTGGYQRIDQAVELLRTGAG 96
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISG H + + + + +L CC+DIGY A++T GNA+EA+ W + +
Sbjct: 97 NRLLISGAHPTTTPSQIRKLTQSPANLFNCCVDIGYDAIDTIGNAREAAKWIHARGYKSI 156
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
L+VT++YHMPR+ EL+ ++ FIPYP+++ DL+ + LR ++ EY K+LL
Sbjct: 157 LVVTNNYHMPRSLAELKYVDPATDFIPYPVVNSDLKTKNWFTDPNALRTMIYEYAKVLLA 216
Query: 183 SIQ 185
+
Sbjct: 217 GAR 219
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A ELL G+++ ISG
Sbjct: 34 IAFVGAGVGFVGFLSQLRGVETKPVNNADGIVVLTGGSSRISDAVELLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W ++ F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQQLLTCCVDLDRSAVNTRSNASETRRWVDEQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAAEARVRLA 213
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LFV L+ F++GF++F V M P AI+VLTG RI+ A +LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPADAIIVLTGGQSRIQAAVDLLKDKRGKRLL 164
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH + ++ L + Q L +CC+D+ ALNT GNA E+ W NN+ V++VT
Sbjct: 165 ISGVHPATNEKALQRATHADQSLFDCCVDLDRSALNTIGNATESERWIRTNNYRRVILVT 224
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ D E+S + + LRVL IEY+K L ++++
Sbjct: 225 NNYHIPRSTLEMSYRMKDVEFIPYPVVNGDRREHSWVSEGDTLRVLFIEYVKYLGAAVRV 284
Query: 187 S----LSTQTASQ 195
TQT
Sbjct: 285 GTTELFGTQTNQS 297
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + +GF+ F+ ++ + + IVVLTG RI A +LL G+++ ISG
Sbjct: 34 IAFVGAAVGFVGFLSQLRGVETKPAANADGIVVLTGGSSRISDAVDLLAGGYGKRLLISG 93
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
VH + + + +P Q L CC+D+ A+NT NA E W + F +++VT +Y
Sbjct: 94 VHPTNGVSDISRSLPDSQRLLTCCVDLDRSAVNTRSNASETRRWVDGQGFRSLIVVTSNY 153
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
HMPR +EL V IP+ +I E LR+LL EY+K L ++ L+
Sbjct: 154 HMPRAIVELSHAMPDVTLIPFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAAEARVRLA 213
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 112/185 (60%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRSFFVLLAFLAVFIAGFLQFADTVASLQPPPTPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG +A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGREAVDTIGNATETSHWIRSRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +F+ YP+++ DL+ + + +L+ +L+EY+K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYVKYS 204
Query: 181 LLSIQ 185
+ S++
Sbjct: 205 VSSLR 209
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LFV L+ F++GF++F V M P AI+VLTG RI+ A LL+++ G+++
Sbjct: 105 LFVILLAFLVGFVAFGEKVTSMQPPAIDEPADAIIVLTGGQSRIQAAVNLLKDKRGKRLL 164
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S ++ +L + Q L +CC+D+ ALNT GNA E+ W NN+ V++VT
Sbjct: 165 ISGVHPSTNEKVLQRATHADQSLFDCCVDLDRSALNTIGNAAESERWIRTNNYRRVILVT 224
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ + V+F+PYP+++ + E+S + + LRVL IEY+K L +++
Sbjct: 225 NNYHIPRSTLEMSYLMKDVEFVPYPVVNGERREHSWVAEGDTLRVLFIEYVKYLGAVVRV 284
Query: 187 S----LSTQTASQFFIT 199
TQ
Sbjct: 285 GASELFGTQPQQSATAA 301
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ + IVVLTG R+ A ELL G+++ I
Sbjct: 46 LALGFLVGAGGFVVFLSQLRGAEQKPRHNADGIVVLTGGSSRVSDAVELLAAGYGKRLLI 105
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D CC+D+ A++T NA E W ++ F +++VT
Sbjct: 106 SGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVVTS 165
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 166 NYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 225
Query: 188 LSTQTASQFFITLIEE 203
L S+ I ++ E
Sbjct: 226 L-----SKLGIEVMPE 236
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF+ F+ ++ + IVVLTG R+ A ELL G+++ I
Sbjct: 32 LALGFLVGAGGFVVFLSQLRGAEQKPRHNADGIVVLTGGSSRVSDAVELLAAGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D CC+D+ A++T NA E W ++ F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LSTQTASQFFITLIEE 203
L S+ I ++ E
Sbjct: 212 L-----SKLGIEVMPE 222
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R L + + F GF F V + P +P AI+VLTG R++ A +LL +
Sbjct: 35 LRISALSLLILAVLFAGGFGWFANKVAHLTTPANPEKADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPD 230
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ + + + IVVLTG R+ A ELL G ++ I
Sbjct: 32 LALGFVAVAGGFVAFLAQLHSAELQPRRNAEGIVVLTGGSSRVSDAVELLAAGYGRRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P D CC+D+ A++T NA E W + F +++VT
Sbjct: 92 SGVHRTNGARDISRSVPESSDWFSCCVDLDRSAVDTRSNAAETRRWVRERGFRSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR E+ V+ IP+ +I + LR+LL EY K L + +++
Sbjct: 152 NYHMPRAIAEMSDAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELRVR 211
Query: 188 LSTQTASQFFITLIEE 203
L S+ I L+ E
Sbjct: 212 L-----SKLGIELMPE 222
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + + GF++F+ ++ + + + IVVLTG R+ A ELL + G+++ I
Sbjct: 32 LALGFVATAAGFVAFLAQLRGAELKPNRTADGIVVLTGGSSRVSDAVELLASGYGKRLLI 91
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P +D +CC+D+ A+NT NA E WA + FH +++VT
Sbjct: 92 SGVHRTNGASDISRSVPDSKDWLDCCVDLDRSAVNTRSNAAETRRWAHERGFHSLIVVTS 151
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +E+ V+ IP+ +I + LR+LL EY K + + ++
Sbjct: 152 NYHMPRAIVEMSHAMPDVELIPFAVIGDKWRDEPWWTSGATLRLLLSEYAKYVAVEARVR 211
Query: 188 LSTQTASQFFITLIEEIT 205
L+ + I L E +
Sbjct: 212 LA-----RLGIELAPEAS 224
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 113/191 (59%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R ++ L L FI GF+ F V + P P AIVVLTG RI++A +LL+
Sbjct: 25 LRRGFFVLLAFLTVFIAGFLQFADTVASLQPPATPKADAIVVLTGGFQRIDQAVDLLKLG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+++ ISGVH S ++ + + DL +CC+DIG+ A++T GNA E S W +
Sbjct: 85 AGKRLLISGVHPSTTRSQIRRNTQSSADLFKCCVDIGHAAIDTIGNATETSLWIRNRGYR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT++YHMPR+ LEL+R +FI YP+++ DL+ + + +L+ +L+EY K
Sbjct: 145 TILVVTNNYHMPRSLLELRRARPETEFIAYPVVNSDLKTTNWLRNPLVLKAILLEYGKYS 204
Query: 181 LLSIQLSLSTQ 191
+ +++ + +
Sbjct: 205 VATLRDVMGAR 215
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 107/185 (57%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + L F GF+ F V M P+ AI+VLTG RIE+A LL +
Sbjct: 31 IRGLILLCVITLGAFSGGFLWFADSVASMRPPEGAKGDAIIVLTGGYQRIEQAVGLLRDG 90
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+G+++ ISGV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W + +
Sbjct: 91 VGKRLLISGVNPATTRTQIRKMTQGSSDMFSCCVDMGYKAIDTIGNANEAASWIRDHGYS 150
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT++YHM R+ EL + QFI YP+IS DL + + ++R +L EY+K +
Sbjct: 151 SIVVVTNNYHMHRSLHELHNASPQTQFIAYPVISADLARTNWFAEPDVVRTMLYEYMKFV 210
Query: 181 LLSIQ 185
+ + +
Sbjct: 211 IAAGR 215
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ +I F+ GF F + I IVVLTG R+ A +LL G+++
Sbjct: 26 RFVVSFVIIFLAGFAWFAGQLHSEEIKPERHADGIVVLTGGASRVADALDLLSRGYGKRL 85
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH + +L+ P R+ L CC+D+ A+NT NA E W ++ F +++V
Sbjct: 86 LISGVHPANGTADILRAQPERETLLSCCVDLDRSAVNTRSNATETRRWVKERGFRSLIVV 145
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHMPR +EL + I YP++S +R++ +EY+K L ++
Sbjct: 146 TSNYHMPRASVELSHAMPDIDLIFYPVVSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVR 205
Query: 186 LSLSTQTASQFFITLIEE 203
+ L+ F + E
Sbjct: 206 VRLAA------FGIVFPE 217
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +GFI F+ ++ I IVVLTG R+ A ELL G ++ I
Sbjct: 13 LAIGFFVAAVGFIGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLI 72
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 73 SGVHPTNEASDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLIVVTS 132
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR +EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 133 NYHMPRAIVELSHAMPSLDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
Query: 188 LSTQTASQFFITLIEEITV 206
L+ + L E+ +
Sbjct: 193 LA-----DLGLDLAPEVDL 206
>gi|218531041|ref|YP_002421857.1| hypothetical protein Mchl_3091 [Methylobacterium chloromethanicum
CM4]
gi|218523344|gb|ACK83929.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 234
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F V L+ GF++F+ V++ P V IV +TG R+ A +LL
Sbjct: 15 LRAFVGLSLVGLLALAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEG 74
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F
Sbjct: 75 HGRRLLISGVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFG 134
Query: 121 HVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT +EL+ IPYP++S L+ + + R+L EYLK
Sbjct: 135 TVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKF 194
Query: 180 LLLSIQLSLSTQTASQFFITLI 201
L+ + + F LI
Sbjct: 195 LVAWGRTRFESDPEQSRFAVLI 216
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R + + F GF F V + P +P AI+VLTG R++ A +LL +
Sbjct: 35 LRLSALSVLILATLFAGGFGWFANKVSHLTTPANPARADAIIVLTGGQSRLDAAMDLLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L ++L CC+DI AL+T GNA+E++ W E + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKNLFSCCVDIDRAALDTIGNAEESAKWVESHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGAKLEPYPVVNSNLDNGGWLTKPRALRVLFTEYNKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPN 230
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +GF+ F+ ++ I IVVLTG R+ A ELL G ++ I
Sbjct: 13 LGLGFFIAAVGFVGFLSQLRGAEIKPERKADGIVVLTGGSSRVSDAVELLAGGYGRRLLI 72
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGVH + + + + +P + CC+D+ Y A+NT NA + WA + F +++VT
Sbjct: 73 SGVHPTNDANDITRSLPEARSFINCCVDLDYSAINTRSNAAQTRRWAAERGFKSLVVVTS 132
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+YHMPR EL ++ IPY ++ + LR+LL EY K + +L
Sbjct: 133 NYHMPRAIAELSHAMPSMDLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYAKYVAAEARLR 192
Query: 188 LSTQTASQFFITLIEE 203
L+ + L E
Sbjct: 193 LA-----DLGLDLAPE 203
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 103/189 (54%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ F+ GF+ F + IVVLTG RI +LL + G+++ ISGV
Sbjct: 43 LALLFVGGFVVFTTAIAPREPAGLKPADGIVVLTGGASRIADGVQLLASGHGQRLLISGV 102
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ + S+D + + +P + L +CC+D+G++ALNT GNA EA+ W F +++VT +H
Sbjct: 103 NRATSQDEIRRTLPDNEHLLDCCVDLGHRALNTFGNAIEAAEWTRAQGFRSLVVVTSAWH 162
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
MPR +EL R V+ + YP+++ ++ + +++LL EYLK ++ ++ +
Sbjct: 163 MPRALVELGRALPEVELVAYPVVTDRMQSGGWWTDPQTVKLLLKEYLKYMMAMAKIRPAQ 222
Query: 191 QTASQFFIT 199
A + ++
Sbjct: 223 AVAPKATVS 231
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L +++
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRV 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 5 WYGLFVCL--------IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
W L + L + F +GF++F+ + + H IV LTG RI A +L
Sbjct: 25 WRRLVLTLAALVGASGLAFGVGFLAFVGCLARTERQPHAPADGIVALTGGAQRIGDAIDL 84
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
L G ++ I+GV+ S++ + + P +Q L CC+D+ Y+A NT GNA E W +
Sbjct: 85 LAAGYGRRLLITGVNERTSREEIARLNPGQQHLIACCVDLDYRARNTIGNAIETRRWMRE 144
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N F V +VT +YHMPRT LEL + + +P+P++ + ++ R+L+ E
Sbjct: 145 NGFRTVAVVTSNYHMPRTLLELGHALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVSE 204
Query: 176 YLKILLLSIQLSLSTQTASQFFITLI 201
Y+K L+ I+ T L+
Sbjct: 205 YVKFLVAWIRTRFETDPEDSRAAVLM 230
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 11 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 70
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 71 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 130
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 131 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 190
Query: 187 SLST 190
++
Sbjct: 191 GSAS 194
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R L V F GF F V + P +P AI+VLTG R++ A ELL +
Sbjct: 35 IRISALSLLVLATLFAGGFGWFANKVSHLTTPANPTKADAIIVLTGGQSRLDAAMELLAS 94
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GE++ ISGVH S S+ L + L CC+DI AL+T GNA++++ W + +
Sbjct: 95 GKGERLLISGVHPSASRRQLQAATGGDKKLFSCCVDIDRAALDTIGNAEQSAKWVTNHAY 154
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT++YHMPR+ LE+ R+ + PYP+++ +L+ + K + LRVL EY K
Sbjct: 155 GTVILVTNNYHMPRSLLEMGRLLHGARLEPYPVVNSNLDNGGWLTKPRALRVLFTEYTKY 214
Query: 180 LLLSIQLSLSTQTASQ 195
LL + + +
Sbjct: 215 LLALARGIVPVKPTPD 230
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 103 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 162
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 163 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 222
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 223 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 282
Query: 187 SLST 190
++
Sbjct: 283 GSAS 286
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 1/200 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLEN 59
+R G + + F ++GF F + ++ P V AIVVLTG RIE+A LLE+
Sbjct: 9 LRILTIGAILGVTFVVIGFFRFTDEIAELKAPGTSVDVDAIVVLTGGYQRIEQALALLED 68
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
IG+++ ISGV+ S S L + + +CC+DIGY+AL+T GNA E + W +NN+
Sbjct: 69 GIGDRLLISGVNPSTSSAALRRATGTQSATFDCCVDIGYQALDTIGNANETADWIRQNNY 128
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
VL+VT++YHMPR+ +EL + + V F+ YP+ DL+ + + LR L EY K
Sbjct: 129 VRVLVVTNNYHMPRSLMELSQASPDVSFVAYPVTHADLKTEAWLTDPVALRTLFTEYAKY 188
Query: 180 LLLSIQLSLSTQTASQFFIT 199
L ++ TA+
Sbjct: 189 SLARLRNWSGATTATGLRAD 208
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L +++
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRV 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 15 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 74
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 75 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 134
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 135 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 194
Query: 187 SLST 190
++
Sbjct: 195 GSAS 198
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 64/177 (36%), Positives = 106/177 (59%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ L F GF+ F V M P+ AI+VLTG RIE+A LL + +G+++ IS
Sbjct: 39 VIALGAFSGGFLWFADSVASMRPPEGARGDAIIVLTGGYQRIEQAVGLLRDGVGKRLLIS 98
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
GV+ + ++ + + D+ CC+D+GYKA++T GNA EA++W +N+ +++VT++
Sbjct: 99 GVNPATTRSQIRKMTQGSSDMFTCCVDMGYKAIDTIGNANEAASWIRDHNYSSIVVVTNN 158
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
YHM R+ EL+ + +FI YP+IS DL + + ++R LL EYLK + + +
Sbjct: 159 YHMHRSLHELRNASPQTEFIAYPVISADLVRTNWFVEPDVVRTLLYEYLKFVAAAGR 215
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 112/191 (58%), Gaps = 6/191 (3%)
Query: 2 RYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
RYF + L + ++FF GF+ F +Q+ P P AI+VLTG RIE +LL
Sbjct: 42 RYFPPTAFFLLMIVLFFCAGFVVFSEKTEQLTPPSPLPKADAIIVLTGGENRIETGLDLL 101
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +G ++ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+
Sbjct: 102 QQGLGSRLLISGVNTTTTLKRFMHSTHITPQLFACCVDIGHKAINTKGNAEESAVWIKKH 161
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
++ V IVTHDYHM R+ EL+ + + FI YP+ + S + ++ +R+L +Y+
Sbjct: 162 HYKTVYIVTHDYHMWRSMRELKYLMPDINFIAYPVKKSG--DESIVQQLNQIRILAFQYI 219
Query: 178 KILLLSIQLSL 188
K + + I+ +
Sbjct: 220 KTIDVYIRTAF 230
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAFIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 116
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 117 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 176
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 177 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 236
Query: 187 SLST 190
++
Sbjct: 237 GSAS 240
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
I+F+ ++ I IVVLTG R+ A ELL G ++ ISGVH + + +
Sbjct: 37 IAFLSQLRGAEIAPDRKADGIVVLTGGSSRVSDAMELLAAGYGRRLLISGVHPTSTASDI 96
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +P Q CC+D+ AL+T GNA EA WA+ F +++VT +YHMPR +E
Sbjct: 97 SRTLPENQSFMTCCVDLDRTALSTRGNAAEARRWAQARRFKSLIVVTSNYHMPRALVEFS 156
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFIT 199
IP+ ++ E LR+LL EY+K + +++ L F I
Sbjct: 157 HAMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEVRVRL-----EDFGID 211
Query: 200 LIEEIT 205
L E++
Sbjct: 212 LSPEVS 217
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 53 LFLAVIAFLGGFFVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKERRGKRLL 112
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GNA E+ W N++H V++VT
Sbjct: 113 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 173 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 232
Query: 187 SLST 190
++
Sbjct: 233 GSAS 236
>gi|163852283|ref|YP_001640326.1| hypothetical protein Mext_2865 [Methylobacterium extorquens PA1]
gi|163663888|gb|ABY31255.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 283
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
GF++F+ V++ P V IV +TG R+ A +LL G ++ ISGV+ +
Sbjct: 79 AGGFLAFVAVVERTDRPSLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTT 138
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+D +++ P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT
Sbjct: 139 RDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTL 198
Query: 136 LELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+EL+ IPYP++S L+ + + R+L EYLK L+ + +
Sbjct: 199 VELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQ 258
Query: 195 QFFITLI 201
F LI
Sbjct: 259 SRFAVLI 265
>gi|240139618|ref|YP_002964094.1| hypothetical protein MexAM1_META1p3069 [Methylobacterium extorquens
AM1]
gi|240009591|gb|ACS40817.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 234
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F V L+ GF++F+ V++ P V IV +TG R+ A +LL
Sbjct: 15 LRAFVGLSLVGLLVLAGGFLAFVAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEG 74
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ ISGV+ ++D +++ P ++ CC+D+ Y+A NT GNA E W +++F
Sbjct: 75 HGRRLLISGVNERTTRDEIVRLNPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFG 134
Query: 121 HVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
V++VT +YHMPRT +EL+ IPYP++S L+ + + R+L EYLK
Sbjct: 135 TVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKF 194
Query: 180 LLLSIQLSLSTQTASQFFITLI 201
L+ + + F LI
Sbjct: 195 LVAWGRTRFESDPEQSRFAVLI 216
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 72 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 131
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++VT
Sbjct: 132 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVT 191
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 192 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 251
Query: 187 SLST 190
++
Sbjct: 252 GSAS 255
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 2 RYFWYGL-------FVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERA 53
R W G+ F+ + ++ GF F +V ++ P IVVLTG RI+
Sbjct: 5 RRMWVGVRSAAATIFLFFVLYVAGFGIFADHVVRLRAPAELNPADGIVVLTGGQSRIDTG 64
Query: 54 FELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+LL+ +++ ISGV+ D L + L CC+DI ALNT GNAQE++ W
Sbjct: 65 MDLLKAGKAKRLLISGVNPVARVDDLRLATGGDRALFNCCVDIDRAALNTVGNAQESAKW 124
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
N + +++VT++YHMPR+ LE++RI PYP+++ L++ + I LRVLL
Sbjct: 125 VSANTYGSIIVVTNNYHMPRSLLEMRRILPNADLQPYPVVNTPLDDGAWISNPDALRVLL 184
Query: 174 IEYLKILLLSIQLSLSTQTASQFFI 198
IEY K + + +
Sbjct: 185 IEYTKYIAALARGLFPAEKGETLSA 209
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
LF+ +I F+ GF+ F V M P AIVVLTG R++ LL+ + G+++
Sbjct: 57 LFLAVIAFLGGFLVFSEKVTGMQPPVLSEPAEAIVVLTGGQSRVKAGINLLKEKRGKRLL 116
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGVH S +++ L + + L CCID+ ALNT GN E+ W N++H V++VT
Sbjct: 117 ISGVHPSTNEEALQRATHADKSLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVT 176
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
++YH+PR+ LE+ V+FIPYP+++ + E S + + LRVL EY+K L ++L
Sbjct: 177 NNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRL 236
Query: 187 SLST 190
++
Sbjct: 237 GSAS 240
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEK 64
L + + FF GF+ F +Q+ P+ P AI+VLTG RIE LL+ ++G +
Sbjct: 49 LFLLMIVFFFCAGFVIFSEKTEQLKPPNPLPKADAIIVLTGGEKRIETGLNLLQQELGSR 108
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ + + + I L CC+DIG+KA+NT+GNA+E++ W +K+++ V I
Sbjct: 109 LLISGVNTTTNLKRFMYSTHITPQLFTCCVDIGHKAINTKGNAEESADWIKKHHYQTVYI 168
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VTHDYHM R+ EL+ + + FI YP+ ++ S+I +I +R+L+ +Y+K L + I
Sbjct: 169 VTHDYHMWRSLRELKYLMPDINFIAYPVKKSEI--ESTIQQINQIRILVFQYIKTLEVYI 226
Query: 185 QLSL 188
+ +
Sbjct: 227 RTAF 230
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R+F+ +C + F GF+ F+ + + IVVLTG RI ++ +LLE
Sbjct: 41 VRFFFLLFLICSVAFAAGFLWFVEVLQPAVQAVVPKHADGIVVLTGGRDRISQSLDLLET 100
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+++ ISGVH S S + + R L +CC+D+ KALNT GNA+E ++W KN F
Sbjct: 101 GSAKRLLISGVHPSTSAKQIARLNSKRMWLFDCCVDLDRKALNTIGNAEETASWVRKNQF 160
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ +L+VT YHMPR ELQ P P+ +L+ I ++LL EY+K
Sbjct: 161 NSLLVVTSAYHMPRALAELQVRLPEADLYPSPVYHKELDLEHWYESSSITKLLLREYVKY 220
Query: 180 LLLSIQLSLST 190
+L+ +++ L T
Sbjct: 221 ILVRLRVELDT 231
>gi|315121772|ref|YP_004062261.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495174|gb|ADR51773.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 188
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 129/186 (69%), Positives = 160/186 (86%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
MRY WY L CLIFFI GF+ FI+Y+ Q+ IP +PS++AIVVLTGEP RIE+AFELLEN+
Sbjct: 1 MRYLWYSLAACLIFFIGGFVLFIQYIVQIPIPANPSINAIVVLTGEPNRIEKAFELLENK 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
IG+++FISGVHHSVSKDILLQKIPIR+DLAECC+DIGYKALNT GNA+EA W K+++H
Sbjct: 61 IGQRVFISGVHHSVSKDILLQKIPIRKDLAECCVDIGYKALNTAGNAKEALEWIRKHDYH 120
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HVLI+THDYH+PR LEL R NS +F+PYPII+HDL++N+ I +K+LR+ IEYLKIL
Sbjct: 121 HVLIITHDYHIPRILLELNRKNSMTKFVPYPIITHDLQKNTLILYMKMLRMTFIEYLKIL 180
Query: 181 LLSIQL 186
LLS+Q+
Sbjct: 181 LLSLQI 186
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
R F LF+ + + GF+ F V +Q+ P+ A+VVLTG RI +L+
Sbjct: 37 RLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGSARIAEGLDLIA 96
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G+++ ISGV+ S L L +CC+D+ AL+T GNA+E + W
Sbjct: 97 AGKGKRLLISGVNEDTSVAALKAINTNHAPLFDCCVDVERAALDTIGNARETAKWVADKG 156
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT YHMPR+ LE +R + P+ +I L + LR L++EY+K
Sbjct: 157 YSSLIVVTSSYHMPRSLLEFRRTMPKLNIKPHAVILEPLAREGWWKNPETLRFLVVEYVK 216
Query: 179 ILLLSIQLSLSTQTASQFFITLI 201
+ +++ L QT S +++
Sbjct: 217 YVGAAMREYLKPQTISALRGSML 239
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q+ P P AI+VLTG RIE +LL+ ++G ++ ISGV+ + +
Sbjct: 60 FVAFTEKVGQLTPPQPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTTTHPN 119
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE
Sbjct: 120 RLIRIMNINPRLFSCCVDIDHQAVNTQGNAKESAHWIKKHRYKTLYIVTHDYHMIRSLLE 179
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + V FI YPI + ++ I + +R+L +EY+K + + I++ LS+
Sbjct: 180 FKYLMPDVNFIAYPIKQN--VADNWIKQANQIRLLALEYIKSISVKIRIILSS 230
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 16 IMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ F++F V+Q+ P P V AI+VLTG RIE ELL+ ++G ++ ISGV+ ++
Sbjct: 52 CLTFVAFTEKVEQLTPPHPLPKVDAIIVLTGGKNRIETGLELLQKKLGSRLLISGVNTTI 111
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ L++++ I L CC+DI + A NT+GNA+E++ W K+ + + IVTHDYHM R+
Sbjct: 112 HPNKLIRRMNINPRLFACCVDIDHHATNTQGNAKESAHWINKHRYKTLYIVTHDYHMIRS 171
Query: 135 FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
LE + + + FI YPI + +S I + +R+L +EY+K + + I++ LS+
Sbjct: 172 LLEFKYLMPNINFIAYPIKQN--VTDSWIKQANQIRLLALEYVKNISVKIRIILSS 225
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G + ++ GF+ F+ + + IV LTG RI A +LL G ++
Sbjct: 43 LGAGLGMLALFAGFLVFVSALARHERTPTDRADGIVALTGGAQRIGDAIDLLAGGYGRRL 102
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
I+GV+ S+D + + P ++ L CC+D+ Y+A NT GNA E W + F V +V
Sbjct: 103 LITGVNERTSRDEIARLNPTQRALIACCVDLDYRARNTIGNAIETRRWMRAHRFSTVAVV 162
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T +YHMPRT +EL + +P+P+++ + + R+L EY+K L+ +
Sbjct: 163 TSNYHMPRTLVELDHALQDSDRVLPHPVVTEAFDADRWWQNPPAARLLASEYMKFLVSWV 222
Query: 185 QLSLSTQTASQFFITLI 201
+ LI
Sbjct: 223 RTRFEADPERSRAAILI 239
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + + + IVVLTG RI A +LL G ++ I+GV+ S+D
Sbjct: 47 FLVFVGGLARTEQQPYARADGIVVLTGGAQRIGDAIDLLAAGFGRRLLITGVNERTSRDE 106
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + P +Q L CC+D+ Y+A NT GNA E W +N F + +VT +YHMPRT LEL
Sbjct: 107 IARLNPGQQHLISCCVDLDYRARNTIGNAIETRRWMRENGFRTIAVVTSNYHMPRTLLEL 166
Query: 139 QRIN-STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFF 197
S + +P+P++ + ++ R+L EY+K L+ ++ +
Sbjct: 167 DHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLASEYVKFLVAWLRTRIEADPEDSRA 226
Query: 198 ITLI 201
L+
Sbjct: 227 AVLM 230
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F +F+ ++ + IVVLTG R+ A +LL + G+++ ISGVH +
Sbjct: 42 FAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASE 101
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P +D CC+D+ A NT NA E WA + F +++VT +YHMPR E+
Sbjct: 102 ISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEM 161
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFI 198
++ IP+ +I + + LR+LL EY K + + ++ L+ + I
Sbjct: 162 SHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLA-----RLGI 216
Query: 199 TLIEE 203
++ E
Sbjct: 217 DIMPE 221
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 88/194 (45%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+ + G + + G F + + D AIVVLTG R+ FELL
Sbjct: 33 LHALFGGALTLAVAWFAGLFLFAAGLPRTPPEDDRQTDAIVVLTGGSERLAAGFELLRAH 92
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
K+FISGV+ V LL+ ECCI +GY A +TEGNA E + W + F
Sbjct: 93 RARKLFISGVYRGVDVQELLRLSRQAPGDLECCIVLGYAADDTEGNAAETALWVRQEGFR 152
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ +VT +YHMPR+ +E +R V I +P+ ++ +++ EY K L
Sbjct: 153 SLRVVTANYHMPRSLVEFRRALPEVDLIAHPVAPPNVRLEHWWRWPGTASLIVGEYNKFL 212
Query: 181 LLSIQLSLSTQTAS 194
L + L A+
Sbjct: 213 LAWTRALLPVPAAT 226
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L V + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 42 LVVIVFIFWGGFIIFSEKTERLVPPTPLPKADAIIVLTGGEHRIETGLHLLQKGLGSRLL 101
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ S + + + I L CCIDIG++A+NT GNAQE++AW +K+++ + IVT
Sbjct: 102 ISGVNTSTNLKSFMHNMHISPQLISCCIDIGHQAINTRGNAQESAAWIKKHHYKTLYIVT 161
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYH+ R+ EL+ + + FI YP+ + S+I +IK R+L+ +Y+K L + I+
Sbjct: 162 HDYHIWRSMRELKYLMPDIHFIAYPVKKS--KAESTIQQIKQARILIFQYIKTLQVYIRT 219
Query: 187 SL 188
+
Sbjct: 220 AF 221
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 93/182 (51%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G V + + F SF V + P P AIVVLTG RI +A LLE E++
Sbjct: 58 LGFIVVVGLVVGSFASFAERVATIETPRDPRADAIVVLTGGKERISKAMRLLEEGRAERL 117
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGVH S + Q L CC+D+ ALNT GNA E ++W ++ F +L+V
Sbjct: 118 LISGVHPGSSARQIAQATSSDLPLFTCCVDLDRAALNTLGNATETASWVAEHEFETLLVV 177
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T YH+PR LEL + +PYP+ S + + + L++L+ EY+K L ++
Sbjct: 178 TSAYHLPRAELELAEVLPNAGLLPYPVFSSERDLTAWYSSFDTLKLLMREYVKYTLARLR 237
Query: 186 LS 187
++
Sbjct: 238 IT 239
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 19 FISFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKD 77
F++F V Q P P AI+VLTG RIE +LL+ ++G ++ ISGV+ +
Sbjct: 62 FVAFTEKVGQFTPPHPLPKADAIIVLTGGKNRIETGLKLLQKKLGSRLLISGVNTRTHPN 121
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
L++ + I L CC+DI ++A+NT GNA+E++ W +KN + + IVT DYHM R+ LE
Sbjct: 122 KLIRIMNINPRLFSCCVDIDHQAINTRGNAEESAHWIKKNRYKTLYIVTDDYHMTRSLLE 181
Query: 138 LQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + + FI YPI +S I ++ +R+L +EY+K + + I++ L +
Sbjct: 182 FKYLMPDINFIAYPIKQD--VADSWIKQVNQIRLLALEYIKNISVKIRIILFS 232
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + + F GFI F +++ P P AI+VLTG RIE LL+ +G ++
Sbjct: 50 LAIIVFIFWGGFIVFSEKTERLSPPKPLPKADAIIVLTGGENRIETGLHLLQKGLGSRLL 109
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
ISGV+ + + + I L CCIDIG++A+NT GNA+E++ W +K++F + IVT
Sbjct: 110 ISGVNTTTNLKGFMHNRHITPRLVSCCIDIGHQAINTRGNAKESATWIKKHHFKTLYIVT 169
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
HDYHM R+ EL+ + + FI YP+ + S+I +I +R+LL +Y+K L + ++
Sbjct: 170 HDYHMWRSMRELKYLMPDIHFIAYPVKKSN--AESAIQQINQIRILLFQYIKTLQVYLRT 227
Query: 187 SL 188
+
Sbjct: 228 AF 229
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 21 SFIRYVKQMHIP-DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
+F V + P V AI+VLTG RIE +LLE G ++ ISGV + + L
Sbjct: 56 AFTEKVGRFTPPHPLQKVDAIIVLTGGKNRIETGLKLLEKGFGSRLLISGVSTTTHPNKL 115
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ + I L CCIDIGY+A+NT+GNA+E++ W +K+ + + IVTHDYHM R+ LE Q
Sbjct: 116 IRMMNINPQLFSCCIDIGYQAINTQGNAKESADWIKKHRYKTLYIVTHDYHMMRSLLEFQ 175
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + FI YPI +S I + +R+L++EY+K + + I+++LS+
Sbjct: 176 YLMPNINFIAYPIKQD--VADSWIKEANQIRLLVLEYIKNICVKIRMTLSS 224
>gi|254562029|ref|YP_003069124.1| hypothetical protein METDI3633 [Methylobacterium extorquens DM4]
gi|254269307|emb|CAX25273.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 234
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ V++ P V IV +TG R+ A +LL G ++ ISGV+ ++D +++
Sbjct: 37 VAVVERTDRPGLDGVDGIVAMTGGSQRVGDAIDLLAEGHGRRLLISGVNERTTRDEIVRL 96
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
P ++ CC+D+ Y+A NT GNA E W +++F V++VT +YHMPRT +EL+
Sbjct: 97 NPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHAL 156
Query: 143 ST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ + + R+L EYLK L+ + + F LI
Sbjct: 157 KDGETLIPYPVVSDGLDVSRWWADPAVTRLLGAEYLKFLVAWGRTRFESDPEQSRFAVLI 216
>gi|188582230|ref|YP_001925675.1| hypothetical protein Mpop_2985 [Methylobacterium populi BJ001]
gi|179345728|gb|ACB81140.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 234
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ V+Q P + IV +TG R+ A +LL G+++ ISGV+ ++D +++
Sbjct: 37 VAVVEQAERPSLDGIDGIVAMTGGSQRVGDAIDLLAEGHGKRLLISGVNERTTRDEIVRL 96
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
P ++ CC+D+ Y+A NT GNA E W ++ F + +VT YHMPRT +EL+
Sbjct: 97 NPSQEHWITCCVDLDYRARNTIGNAIETRRWMRRHGFTAIAVVTSSYHMPRTLVELRHAL 156
Query: 143 ST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
IPYP++S L+ ++R+L EYLK L+ + F LI
Sbjct: 157 RDGETLIPYPVVSDGLDLGRWWADPAVMRLLGAEYLKFLVAWGRTRFEADPEQSRFAVLI 216
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKI 83
++ + + IVVLTG R+ A ELL + G+++ ISGVH + + + +
Sbjct: 40 AQLRGAEVRPGRNADGIVVLTGGSSRVSDAIELLSSGYGKRLLISGVHRTNGVHDISRTV 99
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
P +CCID+ A+NT NA EA WA + F +++VT +YHMPR +E+
Sbjct: 100 PDSHRWLDCCIDLDRSAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRAIVEMSHAMP 159
Query: 144 TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
V+ IP+ ++ + R+LL EY K L ++ L++
Sbjct: 160 DVELIPFAVVGDKWRDEPWWSSGTTFRLLLSEYAKYLAAETRVRLAS 206
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 8 LFVCLIFF-----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
L +CL F + GFI F +++ +VVLTG RI A ELL
Sbjct: 22 LLLCLAGFLASGFVAGFIGFALSLERAEPILTVQADGVVVLTGGSDRIHEAAELLARGQA 81
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HH 121
++ I+GV+ S + + +P+ + L +CCID+GY+AL+T GNA E WA+
Sbjct: 82 RRLLITGVNKSTRGPEIAKLLPVSRQLFDCCIDLGYEALDTAGNAAETREWAKARGIGGS 141
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT +YHMPR +EL V+ P+P++S ++ + + R++ EY+K L
Sbjct: 142 LIVVTSNYHMPRALVELSAALPGVELYPFPVVSEHMQVADWLDDASVARLIGGEYVKYLF 201
Query: 182 LSIQLSL 188
+ L
Sbjct: 202 ALARTRL 208
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 91/181 (50%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + ++ GF F ++++ P IV LTG P RI A++LL+
Sbjct: 16 LRILVGFTALLAAAYVAGFFLFTAELERIPPVRVPVADGIVALTGGPDRITAAYKLLQEG 75
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ I+GVH VS L + +P +CC+D+G+ A NT GNA E + W + N+
Sbjct: 76 KGNRLLITGVHPDVSVASLKEMVPGGSAKFDCCVDLGHMAENTIGNATETAEWVRERNYR 135
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT YH+PR LEL R V+ +P+ L + R+L+ EY K L
Sbjct: 136 SIILVTSTYHLPRARLELARAMPDVEISAFPVFQDTLHLDGWWAYPGTTRLLISEYTKYL 195
Query: 181 L 181
L
Sbjct: 196 L 196
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN 59
+R + + L+ G F F + V +P + AIVVLTG R+ A LLE
Sbjct: 49 LRVLFVAVVTALLAGTAGQFAMFAQKVANARVPATANADAIVVLTGGHARVNEAVRLLEE 108
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++ ISGVH +++ L L +D+ ALNT GNA E + W KN F
Sbjct: 109 GRANRLLISGVHPGTTREQLAAVTASNMPLETNSVDLDRVALNTAGNAVETANWVRKNGF 168
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+L+VT YH+PR +EL V I YP+ S DL+ + + +R+L+ EY+K
Sbjct: 169 SSLLVVTSAYHLPRAKVELAGALPDVSLIAYPVFSKDLKLDHWYREPATMRLLMREYVKY 228
Query: 180 LLLSIQLSL 188
+L +++++
Sbjct: 229 ILARLRITV 237
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIP-DHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + ++ + +G ++F V Q + P +VVLTG R+E A +LLE G++
Sbjct: 6 ALLIVVMVWFVGLLAFTSRVDQSTPALEPPVSDGVVVLTGASNVRLEVATKLLEAGKGKR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ S++ +L + + ECC+D+GY A +T GNA E + WA ++ +++
Sbjct: 66 LLISGVNREASREDVLGVTKAVRPIYECCVDLGYAAADTIGNASETAEWARAKDYRSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL V PYP+++ L + R + +EY K L +
Sbjct: 126 VTADYHMPRSMLELHASMPGVTLHPYPVVTESLNAHRWWQGGTSARRMTVEYCKYLAILG 185
Query: 185 QLSL 188
+ +
Sbjct: 186 REAF 189
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 99/175 (56%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F++F + AIVVLTG P RI A LL + G ++ I+GV+ + S D
Sbjct: 84 FLAFTAQIAAREPAAVKPADAIVVLTGGPSRIVDAVGLLADGRGRRLLITGVNPTTSMDE 143
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +P + L CCID+G+KALNT GNA EA+ WA + F +++VT +HMPR +EL
Sbjct: 144 MRRALPDGEHLLGCCIDLGHKALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMEL 203
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
R V+ + YP+++ + S L++L+ EYLK ++ ++++ + A
Sbjct: 204 GRALPDVELVSYPVVTTRTQPESWWSDPGTLKLLVKEYLKFIMATVKIRPAQAVA 258
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVK-QMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + L+ + +G ++F V P+ P +V LTG R+E A LLE G++
Sbjct: 6 ALLIALMIWGLGLVAFTGRVDLSTPAPEPPEADGVVALTGASSLRLEAATRLLEEGKGKR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + + + +CC+D+G+ A NT GNA E + WA + +++
Sbjct: 66 LLISGVNRETTRADVQSVTKAVKPIYDCCVDLGFTAANTVGNALETAEWARSKGYKSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL V+ PYP+ + DL + R +++EY K L +
Sbjct: 126 VTADYHMPRSMLELSAAMPGVKLFPYPVKT-DLNAHRWWKTSISARRMIVEYCKYLAILG 184
Query: 185 QLSL 188
+ +
Sbjct: 185 REAF 188
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 3/191 (1%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPI-RIERAFELLEN 59
V ++ + G + F V + P AIVVLTG R++ LLE
Sbjct: 2 RSLIAFLVVVLLWAAGLLVFADRVIESTPAIEPEEPADAIVVLTGASDMRLKEGMRLLER 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ GE++FISGV+ V + L+ + L ECC+D+GY+A NT NA+E + WA ++F
Sbjct: 62 RKGERLFISGVNRDVKRPELMDVTEGSKRLYECCVDLGYQAENTVQNAREIAEWARGHDF 121
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+++VT DYHMPR+ LEL+ FI YP+ + DL K R++++EY K
Sbjct: 122 DTLIVVTSDYHMPRSLLELKADMPDAHFISYPVPTADLSARDWWKSGKGARLIVLEYCKY 181
Query: 180 LLLSIQLSLST 190
L + + ++ +
Sbjct: 182 LAILGRDAVLS 192
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W NN+H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANNYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L +++ ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRVGSAS 163
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GNA E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 6 YGLFVCLIFFIMG--FISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIG 62
+ +F IMG F+ F V+Q++ P AI+VLTG RIE LL+ +G
Sbjct: 14 VAFCLLSLFLIMGTHFVIFSEKVEQLYPPVSLSKADAIIVLTGGERRIETGLRLLKQGLG 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
++ ISGV+ + LL+ + I L ECC+D+GY+A NT+ NA+E++ W +K+++ +
Sbjct: 74 SRLLISGVNATFHPKRLLRNMHIDPQLFECCVDLGYQATNTKSNAEESAVWIKKHHYKTL 133
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
IVTHDYH+ R+ LEL+ + + FI YPI + + + ++ +R+L EY+K +
Sbjct: 134 YIVTHDYHIARSLLELRYLMPDINFIAYPIKENVTQNK--VKQLNKIRMLASEYIKNIGF 191
Query: 183 SIQLSLST 190
I+ +
Sbjct: 192 QIRSVFQS 199
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTG-EPIRIERAFELLENQI 61
F + V + ++ G F V+ PD AIV LTG R+ A LLE
Sbjct: 3 FLTLIAVVALMWLTGLFVFAERVRGFTPAPDPARADAIVSLTGPSAERVNAAIRLLEQGK 62
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
G+++ ISGV+ V + L P L CC+D+G++A NT GNAQE +AWA +
Sbjct: 63 GDRLLISGVNREVRRQELRALTPGSSKLFNCCVDLGFEAENTVGNAQEIAAWARSKGYDD 122
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT DYHMPR+ LE++ V+ PY + + L+ + R + +EY+K L
Sbjct: 123 LIVVTSDYHMPRSLLEIRGAAPGVRLTPYAVSTPSLDNAGWWRATETARRMTLEYMKYLA 182
Query: 182 LSIQLSLSTQT 192
+ + + T
Sbjct: 183 VLGREGMHRLT 193
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHI-PDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L + L+ + +G ++F V Q P+ P +V LTG R+E A LLE+ G++
Sbjct: 6 ALLIALMIWGLGLLAFTGRVDQSTPAPEPPISDGVVALTGASTLRLEAATRLLEDGKGQR 65
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + + + +CC+D+G+ A NT GNA+E + WA + +++
Sbjct: 66 LLISGVNREATRAEIQAVTKAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIV 125
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT DYHMPR+ LEL+ V PYP+ + DL R +++EY K L +
Sbjct: 126 VTADYHMPRSMLELRAAMPNVVLHPYPVKT-DLNARRWWKTGVSARRMIVEYCKYLAILG 184
Query: 185 QLSLSTQTASQFFITLIEEIT 205
+ + +E++
Sbjct: 185 REAFLGLGPEDKAAPAAKEVS 205
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEK 64
LF+ ++ F++F ++ + P+ P AI+VLTG RI+ F+LL+ +G +
Sbjct: 44 LALFITILLIGATFVTFSEKIEHLTPPNPLPQADAIIVLTGGENRIKTGFDLLQKGLGSR 103
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ISGV+ ++ + L+ I L +D GY+A NT+GNA+E++AW +++N+ V I
Sbjct: 104 LLISGVNSTIDLNKLIDATYINPHLLVSRVDFGYEATNTKGNAEESAAWIKQHNYKTVYI 163
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VTHDYHM R+ LEL+ + + FI YPI + S I +I +R+L+ EY+K + + I
Sbjct: 164 VTHDYHMVRSLLELKYLMPHIDFIAYPIKENT--TGSWIKQINQMRILVSEYIKNIGVYI 221
Query: 185 QLSL 188
+ +
Sbjct: 222 RTAF 225
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 8 LFVCLIFFIMG----FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
L C+ F++G F +F V +P AIVVLTG R+ A LLE
Sbjct: 55 LVACVTVFVVGTTIQFANFANRVSTATVPVSTQADAIVVLTGGQERVSEAVRLLEEGHAG 114
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ISGVH ++ + + L E +++ ALNT GNA E + W KN F +L
Sbjct: 115 RLLISGVHPGTTRKQIAVVTASAKPLEEGSVELDRVALNTAGNATETANWVRKNGFDSLL 174
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YH+PR EL V I YP+ + DL+ + K +R+L+ EY+K +
Sbjct: 175 VVTSAYHLPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVAR 234
Query: 184 IQLSLST 190
+++++ +
Sbjct: 235 LRIAVRS 241
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQ 87
Q + P AIVVLTG R++ LL+ + G+++ ISGVH S +++ L + +
Sbjct: 2 QPPVLSEP-AEAIVVLTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADK 60
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L CCID+ ALNT GN E+ W N++H V++VT++YH+PR+ LE+ V+F
Sbjct: 61 SLFACCIDLDRTALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEF 120
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
IPYP+++ + E S + + LRVL EY+K L ++L ++
Sbjct: 121 IPYPVVNGEKREQSWVAEGDTLRVLFTEYVKYLGAVVRLGSAS 163
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 90/172 (52%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF+ F V + + IVVLTG +R+E +L+ +++ ISGV+ V
Sbjct: 20 VFGFVLFSVTVTRDDVGGWDKADGIVVLTGGDLRVEAGAKLMNEGRAKRLLISGVNRKVR 79
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++ + + + + CC+D+GY+AL+T GNA E WA N + ++IVT YHMPR+
Sbjct: 80 REEMQRLLGLDAKTFNCCVDLGYEALDTVGNADETRTWARNNGYTKLIIVTSRYHMPRSL 139
Query: 136 LELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
EL + V IPYP+ E + RVL+ EYLK L +L+
Sbjct: 140 AELALVMPKVTLIPYPVTPRHFPETAWWLHSSTTRVLVSEYLKFLPAVARLA 191
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 105/185 (56%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ + F+ F + V + P+ S IVVLTG RIERA LL+ + ++ ISGV
Sbjct: 12 LVAGLGISFLLFAQSVVSIRAPEEASADGIVVLTGGQDRIERAVGLLQEERARRLLISGV 71
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+ + + ++++ L CC+D+ KALNT GNA E +AWA + F +L+VT YH
Sbjct: 72 YPATTDRQIVERTSGDLPLFRCCVDLDRKALNTVGNAVETAAWARTHGFSSLLLVTSAYH 131
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLST 190
+PR LEL+ + ++ +PYP+ + DL +S + + +R+LL E++K L +++
Sbjct: 132 LPRAALELKAVMPELELVPYPVFAEDLMLSSWYRRPQTIRLLLREFVKYTLARLRIGTIG 191
Query: 191 QTASQ 195
A++
Sbjct: 192 LPAAE 196
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG-EPIRIERAFELLE 58
M++ V LI +++G +F V+ + D P IV LTG R+ A LLE
Sbjct: 1 MKFLALVGIVGLI-WLVGLFAFADRVRNLTPADEPARADGIVALTGPSAERVNAAVRLLE 59
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
GE++ ISGV+ V + L + P L CC+D+G++A +T GNAQE +AWA N
Sbjct: 60 QDKGERVLISGVNREVRRQELRELTPGSNRLFNCCVDLGFEAEDTGGNAQEIAAWAGSKN 119
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ +++VT DYHMPR+ LE++ ++ PY + + L+ + R + +EY+K
Sbjct: 120 YTSLIVVTSDYHMPRSLLEIRSAAPGLELTPYAVSTPSLDNSRWWRAAVTARRMTLEYMK 179
Query: 179 ILLLSIQLSL 188
L + + ++
Sbjct: 180 YLAVLGREAV 189
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 1 MRYFWYGL----FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPIRIERAFE 55
M+ W L FV ++ ++GF ++ V +P + AI+VLTG+ R+ E
Sbjct: 1 MKQSWLWLRGLCFVVVLASMIGFAAYAGKVTGYDLPATDNTVDAIIVLTGDAGRLSAGGE 60
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL++ + ISGVH SV+ + ++ + D CC+ +G +A +T GNA+EA+A+ +
Sbjct: 61 LLQDGRASHLMISGVHPSVTTADIRRQTGLGDDAFSCCVTLGREATDTVGNAREAAAYVQ 120
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
N + ++IVT DYH+PR+ LE + V IPYP+ + + LR+ L E
Sbjct: 121 ANGYDRLIIVTSDYHLPRSLLEFRSHMPGVDLIPYPVRTQAP-----WQDVGALRLWLQE 175
Query: 176 YLKILLLSIQLSLSTQTASQ 195
Y K + ++ SL++QT
Sbjct: 176 YAKYTTVQLRHSLTSQTEDA 195
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R L + + GF F+ +K IVVLTG RI A LL
Sbjct: 25 LRLGGVLLLAATVALLAGFGLFVAGIKGREAQTARRADGIVVLTGGAERITDATNLLVEG 84
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G ++ I+GVH + + + +P ++ ECC+++G ALNT GNA E + WA ++ F
Sbjct: 85 RGTRLLITGVHPDTTLAEIGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFR 144
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+L+VT +HMPR +EL+R V+ +PYP++ EN + +R+L +EY+K +
Sbjct: 145 SLLVVTSAWHMPRALVELRRALPDVELVPYPVVPKRGPEN-WEASLANVRLLFVEYVKFI 203
Query: 181 LLSIQLSLSTQTASQFF 197
+ + + ++Q
Sbjct: 204 GAWLGVRSWPELSTQLG 220
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
F+ G+++F + + A+V LTG R+ A + L +++ I+GV+ +
Sbjct: 32 FVAGYVAFALSLARQEPILKVEAEAVVALTGGSDRVLDAADFLARGQAKRMLITGVNRAT 91
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIVTHDYHMPR 133
+L + +P+ +DL CC+D+GY+A++T GNA+E WA+ N +++VT +YHMPR
Sbjct: 92 RSSVLARILPVSRDLFNCCVDLGYQAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPR 151
Query: 134 TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
+EL ++ P+P++S ++ + + R++ EY+K L ++ LS
Sbjct: 152 ALVELSAALPDIKLYPFPVVSEHVDVADWATDLGVARLVGSEYVKFLGALLRTRLS 207
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG RI A +LL G+++ ISGV+ +++ +++ P ++ CC+D+ Y+A N
Sbjct: 1 MTGGAQRIGDAIDLLAGGRGKRLLISGVNERTTREEIIRLNPAQEQWISCCVDLDYRARN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQFIPYPIISHDLEENS 161
T GNA E W ++ F V +VT YHMPRT +EL+ + IPYP+++ LE
Sbjct: 61 TIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPVVTEGLEIER 120
Query: 162 SIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
R+L EYLK L+ ++ T F LI
Sbjct: 121 WWADPAATRLLGAEYLKFLVAWLRTRFETDPEQSRFAVLI 160
>gi|306842871|ref|ZP_07475508.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
gi|306286958|gb|EFM58475.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
Length = 162
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 54/148 (36%), Positives = 91/148 (61%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+TG R++ LL+ + G+++ ISGVH S +++ L + + L CCID+ ALN
Sbjct: 1 MTGGQSRVKAGINLLKEKRGKRLLISGVHPSTNEEALQRATHADKSLFACCIDLDRTALN 60
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
T GNA E+ W N++H V++VT++YH+PR+ LE+ V+FIPYP+++ + E S
Sbjct: 61 TVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPVVNGEKREQSW 120
Query: 163 IFKIKILRVLLIEYLKILLLSIQLSLST 190
+ + LRVL EY+K L +++ ++
Sbjct: 121 VAEGDTLRVLFTEYVKYLGAIVRVGSAS 148
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 2 RYFWYGLFVCLIF---FIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELL 57
R + V ++ GF+ F V + P + IVVLTG +RI++A +LL
Sbjct: 37 RLCLAAVLVGVLLGGYLAGGFVRFAEEVSLLAKPAPIGAADGIVVLTGGALRIDQAIDLL 96
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ G ++ ISGV+ S L + +DL CC+D+ Y ALNT GNA+ A WA +
Sbjct: 97 KEGRGRRLLISGVNPGTSAATLARMTDTDRDLFACCVDLDYAALNTVGNAEIARNWAREQ 156
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
F +++VT DYHMPR+ E RI PY + DL + LRVLL EY
Sbjct: 157 GFRDLILVTSDYHMPRSLREFDRIGELRSVTPYAVRRDDLWSAELMPNTAGLRVLLTEYA 216
Query: 178 KILLLSIQLSLS 189
K++ ++L
Sbjct: 217 KLIAARVRLVFG 228
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 20 ISFIRYVKQMHI---PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSK 76
+ + + AIVVLTG R+ ELL +K+F+SGV+ V
Sbjct: 36 FWYAADIPRSSPTGAEAERLTDAIVVLTGGRNRLSTGLELLAAGRAKKLFVSGVYDGVEV 95
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
LL+ ECCI +GY A +T GNA E + W FH + +VT +YHM R+ L
Sbjct: 96 QELLKLSRHSPTEMECCITLGYSADSTIGNAYETADWMHDQGFHSLRLVTANYHMRRSLL 155
Query: 137 ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
EL V +P+P+++ + + +L+ EY K+L++ ++
Sbjct: 156 ELSMAMPDVDLLPHPVVAPTVHLDDWWMWPGTANLLVTEYNKLLVVGLR 204
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + GF+ F+ V + AIVVLTG R+ +LLE + +++FI
Sbjct: 16 LVALAALWSGGFLWFVDEVPRAVDDQTSHTDAIVVLTGGRERLTTGLDLLEAGLSQRLFI 75
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SGV+ V ++Q L E + +GY A +T GNA E + WA ++N + IVT
Sbjct: 76 SGVYKGVDLAEIIQLGRGHAGLKEAVV-LGYAADDTVGNAIETALWATEHNLRSLRIVTG 134
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
YHMPR E + + I +P+ ++ +L EY K L I+
Sbjct: 135 AYHMPRALAEFRHALPEITLIAHPVFPDQVKSREWWRWPGTAALLATEYSKYLAAIIRHW 194
Query: 188 LSTQTA 193
+ A
Sbjct: 195 FLPRKA 200
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVS 75
+ GF F V M AIV LTG+ RI A LL ++ ISGVH +
Sbjct: 1 MCGFFIFAYSVSIMPSTRLKDADAIVALTGDEERIAAAVRLLSEGKARRLLISGVHKTTR 60
Query: 76 KDILLQKIPIRQD----LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
++ R L CC+D+ A NTE NA E + W K + +++VT YHM
Sbjct: 61 APQIMSLTTSRGSRSWSLFSCCVDLD-NAHNTEANAAETTNWVRKRGYRSIIVVTSTYHM 119
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
PR +EL + V+ +PYP+ + L+E + VL EY+K + + ++
Sbjct: 120 PRALIELHQAMRDVELVPYPVRAPRLDER-WWRDSRTAWVLWKEYMKYITAMARYGANSI 178
Query: 192 TASQFFITLIEEI 204
+ + + ++
Sbjct: 179 SNASARVEHEPQL 191
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPI-RIERAFELL 57
MR + + + ++ G +F V P +A IVVLTG RI+ LL
Sbjct: 1 MRRL-LAVVLVIGLWLAGLYAFADRVIHSTPAAEPEEAADAIVVLTGASDMRIKEGMRLL 59
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + G ++ ISGV+ V ++ LL + L ECC+D+GY+A T GNA E + WA+
Sbjct: 60 ERRKGARMLISGVNREVKREELLPVTEGSKKLYECCVDLGYEAQTTLGNAYEVAEWAKAK 119
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
F +++VT DYH+PR+ LE++ V+ YP+ + L+ + RVL++EY
Sbjct: 120 GFDDLIVVTSDYHVPRSLLEIKAALPGVKLHAYPVATPTLDAREWWKSWRSSRVLIVEYS 179
Query: 178 KILLLSIQLSLSTQTAS 194
K L + + S+ T+S
Sbjct: 180 KYLAILARDIFSSLTSS 196
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R+ F+ L F++GF F+R + AIVVLTG P R+ A LL++
Sbjct: 7 RFLRLTAFILLTAFVVGFALFVRQARTFTPDASVRGQAIVVLTGGPNRVSTAAALLQDGS 66
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
G ++ ISGV+ + Q L ECC+D G +A +T GNA E +AWA ++ +
Sbjct: 67 GRRLLISGVNPDSPPADIAAAAGASQALFECCVDFGLQAADTIGNAAETAAWARQHGYDR 126
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+++VT DYHMPR LELQ V+ + Y + + R L+EY+K
Sbjct: 127 IIVVTSDYHMPRALLELQAAMPDVRLVAYGVPAPAP-----WSGGHEARRWLVEYVKYAA 181
Query: 182 LSIQLSLST 190
+ + + T
Sbjct: 182 VYGRERVRT 190
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPI--RIERAFELLENQIGE 63
V + + G ++ V+Q P IV LTG RI A LLE+ G
Sbjct: 6 AFLVLALIWFAGLFAYAHRVQQSTPARLPPPADGIVALTGAGSKERIAAAIGLLEDGYGR 65
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ +SGV+ S++ + + L +CC+D+G+ A +T GNA+E + W E + +
Sbjct: 66 RVLVSGVNPEASREDIRNLSRAVRRLYDCCVDLGFTAADTVGNARETAEWTEAMRYRSLT 125
Query: 124 IVTHDYHMPRTFLELQRINS--TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
IVT DYHMPR LEL+ + V+ Y + + L+ + + + R++++EY K L
Sbjct: 126 IVTADYHMPRAMLELRAVFHGTGVRLSTYAVPTPALKSSHWWRQPRAARLMVVEYCKYLA 185
Query: 182 LSIQLSL 188
+ + ++
Sbjct: 186 ILGREAV 192
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD-HPSVSAIVVLTGEPIRIERAFELLENQ 60
R ++ G F V I D + AIVVLTG R+ +LL
Sbjct: 6 RRLGLLALTAFGLWLAGLALFASTVLPSAIEDDQTTTDAIVVLTGGSERLPVGLDLLARG 65
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+G K+F+SGV V+ D L I + + +G+ AL+T GNA+E + W +F
Sbjct: 66 LGRKLFLSGVGVEVTLDDLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFT 125
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ +VT YHMPR+ +E + V+ I +P+ +++ R++ EY K L
Sbjct: 126 SLRLVTAAYHMPRSLVEFRAAMPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAEEYSKFL 185
Query: 181 LLSIQLSLSTQTASQFFITL 200
+ ++ +LS L
Sbjct: 186 VAWLRRTLSPVNVEALAAPL 205
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + +G + + + P+ A+VVLTG R++ LL +F+
Sbjct: 27 VLSLATAWTIGLVRYASRIPTQPTLVEPAA-AVVVLTGGSKRMDAGVALLAKGTAPVLFV 85
Query: 68 SGVHHSVSKDILLQKIP-----IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
SGV H V + IP + Q +CC+ +GY A +T GNA+E + WA +
Sbjct: 86 SGVDHRVDPARIRDLIPDAGDSLDQATIDCCVVLGYGASDTLGNARETALWARATERTSL 145
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
++VT +YHMPR LE V+ +PYP+I D+ ++ L ++ E+ K +
Sbjct: 146 ILVTSNYHMPRARLEFTHALPEVRLVPYPVIPPDVRMDAWWRWPGTLGLVAGEWTKYVFA 205
Query: 183 SIQLSLSTQTASQF 196
+++ L+ +S
Sbjct: 206 RVRIGLADLVSSAA 219
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 77/164 (46%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQ 81
F + A+VVLTG R+ LLE G K+F+SGVH V LL+
Sbjct: 31 FAADLAIRVEDQSTVTDAVVVLTGGAERLNSGIALLEAGRGRKLFVSGVHRGVDLPDLLR 90
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + A CCI +G+ A +T GNA E +AW + F + +VT YHM R+ LEL+R
Sbjct: 91 QAHVSPERARCCIVLGHAADDTVGNATETAAWMGREGFSSLRLVTAAYHMRRSLLELRRA 150
Query: 142 NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
I +P+ + + +L +EY K L +
Sbjct: 151 LPDATIIAHPVFPDAFKRDQWWRWPGTAHLLAVEYTKYLAALAR 194
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVKQM----HIPDHPSVSAIVVLTGEPIRIERAFE 55
R + + ++ GFI F+RY + + + P AIVVLTG RIERA
Sbjct: 26 RKRRFAILCLVVLVAGGFIVGSFLRYAETTAAVSRLENVPPADAIVVLTGGANRIERAIS 85
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
LL+N G+++ ISGV+ + S + + DL ECC+DI AL+T GNA EA WA
Sbjct: 86 LLKNGYGKRLLISGVNENTSARAIARATNTDLDLFECCVDIDVAALDTVGNAMEAVRWAA 145
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+N F +++VT DYHM R+ +E R+ + P + +L ++ +I + L VL++E
Sbjct: 146 ENGFDELILVTSDYHMQRSLIEFDRVGDLDRITPVAVRLDELWQDDTIPTRRGLEVLVME 205
Query: 176 YLKILLLSIQLSL 188
Y K++ ++ ++
Sbjct: 206 YAKLMAARVRAAI 218
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLEN 59
+R + + + F GF F+ + P + P IV LTG RI+ + LL
Sbjct: 4 IRLSFRLILLACFAFAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLAR 61
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
GEK+ ISGV + LL LAE I +GY+A +T GNA E + W N+
Sbjct: 62 NQGEKLLISGVDTQTTLGELLPPT-APPALAER-ITLGYQARSTIGNATETAVWVADNHI 119
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+++VT YHM R LEL R V PYP++ +E + LR+L +EYLK
Sbjct: 120 TSLIVVTASYHMRRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKW 176
Query: 180 LLL 182
L
Sbjct: 177 LGA 179
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ V L+ +++GF F ++ Q D AIVVLTG RI+R LL++ +++
Sbjct: 4 RFIAVTLLGWMLGFAWFAIFLPQ--PLDGRQTDAIVVLTGGAGRIDRGLALLQDGAAKRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + + L CCI +G +A++T NA E + W E+ +F V ++
Sbjct: 62 LISGVDRSVRPVELAAQYKVPERLFSCCITLGREAIDTRSNAIETAHWLERRDFKTVRLI 121
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL++ V + + S L +L EY K LL
Sbjct: 122 TTDWHMRRSALELRQALPERVTLVYDAVPSR-----------PSLTMLAREYNKYLLRRA 170
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ + L+ +++GF F + Q D AIVVLTG RI+R LL++ +++
Sbjct: 4 RFIALTLLAWMLGFAWFAILLPQ--PLDGRQTDAIVVLTGGAGRIDRGLSLLQDGAAKRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + L CCI +G +A++T NA E + W E+ +F V ++
Sbjct: 62 LISGVDRSVRPAELAAQYDAPERLFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLI 121
Query: 126 THDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL++ V + + S L +L+ EY K LL
Sbjct: 122 TTDWHMRRSALELRQALPGRVTLVYDAVPSR-----------PSLMMLVREYNKYLLRRA 170
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ L+ +++GF F ++ D AIVVLTG P RI+R L++ ++
Sbjct: 4 RLAALALLGWVLGFAWFAIFLP--EPLDGRRTDAIVVLTGGPGRIDRGIALMQQGAARRM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV SV L + + L +CCI +G +A++T N E + W + ++ V +V
Sbjct: 62 LISGVDRSVRPGELAAQYDAPEALFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLV 121
Query: 126 THDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R+ LEL Q + + + + SH L VL+ EY K LL I
Sbjct: 122 TTDWHMRRSALELTQALPPRIHIVYDAVPSH-----------PSLSVLMREYNKYLLRRI 170
>gi|329114135|ref|ZP_08242897.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
gi|326696211|gb|EGE47890.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
Length = 216
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 13 IFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVH 71
F GF F+ + P + P IV LTG RI+ + LL GE++ ISGV
Sbjct: 38 FAFAGGFGWFVN--DALRPPGYLPHADGIVALTGGAGRIDTSLNLLARNQGERLLISGVD 95
Query: 72 HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
+ LL LAE I +GY+A +T GNA E + W N+ +++VT YHM
Sbjct: 96 TQTTLAALLPST-APPALAER-ITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHM 153
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
R LEL R V PYP++ +E + LR+L +EYLK L
Sbjct: 154 RRALLELSRTLPDVTLYPYPVLPPAMEHP---LRRSSLRLLALEYLKWLGA 201
>gi|330993951|ref|ZP_08317881.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
gi|329758897|gb|EGG75411.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
Length = 201
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
+ + G F+ + + P IV LTG RIE + LL ++ ISGV
Sbjct: 4 AALAWTAGLAWFVHDAMRPPVLP-PRADGIVALTGGQGRIEESVRLLVQGRAGRLLISGV 62
Query: 71 HHSVSKDILLQKIPIRQDLAECC-IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
++ L+ +P LA +G +A +T GNA E +AW + H +++VT Y
Sbjct: 63 DPHATRGDFLRHLPPPVPLAAWTHTTLGSRATSTLGNADETAAWVREYGLHSLIVVTAGY 122
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
H+ R LE+ R V+ PI S L F +R++++EY K LL + +
Sbjct: 123 HIRRAMLEISRTVPGVRLYGDPIRSPALAHP---FHPATMRLMVVEYDKWLLACLDVVRL 179
Query: 190 TQT 192
T+
Sbjct: 180 TRP 182
>gi|254292607|ref|YP_003058630.1| hypothetical protein Hbal_0231 [Hirschia baltica ATCC 49814]
gi|254041138|gb|ACT57933.1| protein of unknown function DUF218 [Hirschia baltica ATCC 49814]
Length = 197
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L CL F+SF Q+ P D + A++ LTG RI A E+ ++Q +
Sbjct: 13 LVFCLFLIGYDFVSFSYRAAQLATPQFDTSNPHAVIALTGGSNRIAFAAEIAKDQNLP-L 71
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
FISGV+ D + + ECC +GYKA T N E + W+ K+ + ++IV
Sbjct: 72 FISGVNREAKPDEVAIAAGVDTAFFECCTTLGYKARTTYENGLEVAQWSTKSGYTRLIIV 131
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
T +YHM R LEL+R V + S ++ ++ ++ + + IE++K ++ +
Sbjct: 132 TSNYHMERALLELERAMPNVTLTGLAVASPAIKADAWWTDMRSAKRMGIEWVKWRIIKTR 191
Query: 186 LSLST 190
+
Sbjct: 192 RLFQS 196
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQ 60
R+ + ++ +++GF F+ + + + P IVVLTG R++ ELL
Sbjct: 24 RWPLRAVLALVVLWLVGFAWFLGDIAEERPINPMPHAGGIVVLTGGADRVKAGLELLMAG 83
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ISG + + I + I +G+ A T GNA+E +AWA +++
Sbjct: 84 AAPRLLISGAGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIG 143
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT DYHMPR LEL R V IP P+ + + +L++L+ E+ K +
Sbjct: 144 SLVVVTADYHMPRALLELHRALPGVTLIPEPVRPPAMTNPG---QPHMLKILVTEFCKYI 200
Query: 181 LLSIQLS 187
++ ++L
Sbjct: 201 VVRLRLG 207
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPIRIERAFELLENQ 60
R+ + ++ +++GF F+ + + + P IVVLTG R++ ELL
Sbjct: 24 RWPLRAVLALVVLWLVGFAWFLGDIAEERPINPMPHAGGIVVLTGGADRVKAGLELLMAG 83
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ISG + + I + I +G+ A T GNA+E +AWA +++
Sbjct: 84 AAPRLLISGAGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIG 143
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+++VT DYHMPR LEL R V IP P+ + + +L++L+ E+ K +
Sbjct: 144 SLVVVTADYHMPRALLELHRALPGVTLIPEPVRPPAMTNPG---QPHMLKILVTEFCKYI 200
Query: 181 LLSIQLS 187
++ ++L
Sbjct: 201 VVRLRLG 207
>gi|326386450|ref|ZP_08208073.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209111|gb|EGD59905.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
Length = 194
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
F L + ++ +++GF+ F ++ DH A++ LTG RI+R E+L
Sbjct: 9 LFRRILSLMVLAWLLGFLWFALFLP--RPADHTRTDAVIALTGGSGRIQRGIEVLRADEA 66
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+++ +SGV V + + L CC+ +GY++ +T NA EA+ W + + V
Sbjct: 67 KRMLVSGVDSEVKPAEFEAEYGVPASLFACCMTLGYESFDTRSNALEAARWIARYDLRSV 126
Query: 123 LIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+VT D+HM R +L + + + SH +R+L +EY K L
Sbjct: 127 RLVTTDWHMRRAAFDLAVAAPKGLVIVEDAVPSH-----------PSMRILFVEYNKFLA 175
Query: 182 LSI 184
+
Sbjct: 176 RML 178
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + ++ GF F + H + IVVLTG RI+R +LE +K+
Sbjct: 12 RFLICLFMLWLGGFWLFYSF--HAHPTNKQVTDGIVVLTGGAGRIDRGLMMLERHQAKKM 69
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+SGV+ V + L I L ECC+D+G +A++T NAQE + W N++H V ++
Sbjct: 70 LVSGVNRQVKAEELAALYDIPSHLIECCVDLGTQAVDTSSNAQETAEWITLNHYHSVRLI 129
Query: 126 THDYHMPRTFLELQ-RINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS- 183
T D+HM R EL I ++ + I SH RV +IEY K L
Sbjct: 130 TTDWHMARARFELSLMIGKDIKVVEDAIPSHA-----------GWRVWIIEYCKYLWRRS 178
Query: 184 -IQLSLSTQTASQFFITL 200
+ + ++ ++
Sbjct: 179 SVAIGFNSIPYPSAPASI 196
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W ++ +++GFI F ++ + A++V TG RIER E+++ +
Sbjct: 3 WRVGLAIVLVWVLGFIWFAGWLPGPAPME--RTDAVIVPTGYAGRIERGLEVVQTDSADT 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + +D+ ECC+ +G+ A +T GNAQE WAE + + +
Sbjct: 61 LLVTGVDPEVKPGEFAAQFKVPEDVMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRL 120
Query: 125 VTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT D+HM R EL+R V+ I + S L +LLIEY K L+
Sbjct: 121 VTSDWHMRRAATELRRQLPGDVKLIKDAVRSE-----------PSLWLLLIEYHKWLVSR 169
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 79/192 (41%), Gaps = 6/192 (3%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
F L+ GF+ F + + IVVLTG R+ +LL G
Sbjct: 31 FGLLGGFALLVLSGGFLWFAWQSQHVLRAPS-HADGIVVLTGGAERVATGLKLLAAGRGS 89
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ISGV S L + I E + +GY+A T GNA E + WA + + V+
Sbjct: 90 VLLISGVAKGASLGTLARVAGIDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVI 149
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+VT YHMPR EL+R V P + + IL++L EYLK L
Sbjct: 150 VVTAGYHMPRALAELRRAMPDVILYPETVHPDQGGSL-----LNILKLLSSEYLKWLGAE 204
Query: 184 IQLSLSTQTASQ 195
+ LS T
Sbjct: 205 LHLSSLTPVRET 216
>gi|87198723|ref|YP_495980.1| hypothetical protein Saro_0699 [Novosphingobium aromaticivorans DSM
12444]
gi|87134404|gb|ABD25146.1| protein of unknown function DUF218 [Novosphingobium aromaticivorans
DSM 12444]
Length = 182
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
F L + +I + +GFI F ++ + + IVVLTG RI A LL+ G
Sbjct: 6 IFRRLLSLLMIAWALGFIWFAVFLPR-PAAEPARTDGIVVLTGGSGRIPHALRLLQTGAG 64
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
K+ +SGV V + + L CCI +GY A++T NA E++ W + N V
Sbjct: 65 RKLLVSGVDREVRPREFAVEYDVPSRLMTCCIVLGYDAVDTRSNAVESARWMQTNRIRSV 124
Query: 123 LIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILL 181
+VT D+HM R +L + + + ++S R+L IEY K L+
Sbjct: 125 RLVTTDWHMRRAAFDLAQEAPKDLVIVEDAVVSR-----------PSFRILFIEYNK-LV 172
Query: 182 LSIQLSL 188
+ L
Sbjct: 173 ARLAAWL 179
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHI--PDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + F + F F+ + + IVV TG R+ LL + +K+ I
Sbjct: 26 ILVAFMLASFQHFVLTLPRGETDFTKLDHTDGIVVTTGGQQRLVEGLNLLVSGTTDKVLI 85
Query: 68 SGVHHSVSKDILLQKIPIRQDLAE---CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SGV V+K +L+Q++ + CC+++ Y AL+T GNA A AW + N + +
Sbjct: 86 SGVGKGVNKAVLVQELNLDDQQVSALFCCVELEYGALDTRGNALAARAWIDLNGLKSIRL 145
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
VT +YHMPR + R V + + + L+ I+R+L EY K + I
Sbjct: 146 VTANYHMPRAEIVFSRAIPNVDIHQWAVSPNALDVERWWQDPMIIRLLTREYAKYVAEII 205
Query: 185 QL 186
+L
Sbjct: 206 RL 207
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
M+ ++ GF FI+ + + P IV LTG R++ LL
Sbjct: 43 MKRLLLTCLALGGLWLAGFAWFIQDASKASVTA-PVCDGIVALTGGEQRVDTGITLLRGG 101
Query: 61 IGEKIFISGVHHSVSKDILL--QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G + ISGV V+ +L Q+ + LAE I +G +A +T GNA E + WA N+
Sbjct: 102 YGHLLLISGVGPHVTLQHILHLQQESLSSPLAER-ITLGRRATSTIGNAHETAQWARDNH 160
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
H +L+VT YH+ R LE+ R+ + +PYP++ L+ + L ++ EY K
Sbjct: 161 LHRLLVVTAGYHIRRAVLEIHRVAPDLALVPYPVVPLALQAP---LSRRTLFLMFREYNK 217
Query: 179 ILLLSI 184
L I
Sbjct: 218 FLGAEI 223
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
Y L ++ + +GF F + Q + S A++V TG P RI + ++LE +++
Sbjct: 6 YLLAASVLVWALGFFWFAAALPQ--PAEELSTDAVIVPTGGPGRIAQGLQVLEQGQAQRM 63
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++GV V++D + + + +CCI +G +A++T NA E + W N+ + +V
Sbjct: 64 LVTGVDPEVTRDEFAAEFEVDEARMDCCITLGSEAVDTRSNATETAEWVAANDITSLRLV 123
Query: 126 THDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T D+HM R EL R +V + + S L L +EY K++ I
Sbjct: 124 TTDWHMRRAAGELDRELPSSVTVVRDAVPSQ-----------PSLASLFLEYHKLIASFI 172
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQM----HIPDHPSVSA---IVVLTGEPIR-IER 52
MR+ + + GF F+ + + S A +V+LTG R I+
Sbjct: 1 MRFVLKIAALMGLLCAAGFFVFVAALPRSSNEQAALRSLSADARTGMVILTGGAGRRIQH 60
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+L G+++ ISG H V K+ L + +D CC+D+G +A T GNA EA
Sbjct: 61 GLDLFAQGYGDRVLISGTHPLVDKEDL--EGLGVRDSLHCCVDLGPRARTTIGNALEARD 118
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
WA + + +L+VT D+H+PR LEL+ + + I + + + + RVL
Sbjct: 119 WARRRGYDTILLVTSDFHLPRALLELEAVAPELTVIGIAVDTRSAPSANWMRSPSAWRVL 178
Query: 173 LIEYLKILLLSIQLS 187
EY+K +L +
Sbjct: 179 AEEYIKYILAWTRHR 193
>gi|148555918|ref|YP_001263500.1| hypothetical protein Swit_3011 [Sphingomonas wittichii RW1]
gi|148501108|gb|ABQ69362.1| protein of unknown function DUF218 [Sphingomonas wittichii RW1]
Length = 177
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+I GF++F ++ Q PD + IVV+TG R+ER LLE + +++ ISG V
Sbjct: 13 WIAGFMAFALFLPQ-PAPDGIATDGIVVMTGGRGRVERGLRLLEAKRAKRLLISGADRRV 71
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
L + L ECC+D+G+++++T NA EA+ W + + + +VT D+HM R
Sbjct: 72 RPHELAAQFKAPMALVECCVDLGHESVDTRSNAAEAADWIARRRYRSIRLVTSDWHMVRA 131
Query: 135 FLELQRINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+L+ ++ + + + + L+ EY K LL +
Sbjct: 132 RFDLRNATGDKLEIVADAVPTEPGLVD-----------LVREYNKYLLRRV 171
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 16/188 (8%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGE 63
+ + + + +GF +F+ + H ++ + AIVV TG RI+R LL+ +
Sbjct: 1 MLRLIGLVALGWCLGFAAFMLSLP--HPLENNTTDAIVVPTGGAGRIDRGIALLQAHQAK 58
Query: 64 KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++ ++GV V L + L CCID+G +A++T NA+E + W ++ + V
Sbjct: 59 RMLVTGVAPGVRPIDLARTYRTAPSLFSCCIDLGLEAVDTRSNAEETARWVREHGYRTVR 118
Query: 124 IVTHDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+VT D+H+PR +EL + V + + S L L+ EY K++L
Sbjct: 119 LVTSDWHLPRARMELVAALGPQVVVLGDGVPSE-----------PRLGTLVNEYNKLILR 167
Query: 183 SIQLSLST 190
+++L T
Sbjct: 168 --RIALWT 173
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
L + + GF+ F + A++VLTG P RI R E++E + +++
Sbjct: 4 RLLAAIFLVYAFGFLGFAMTLP--APAAKTETDAVIVLTGGPGRIARGLEVVEQNMAKEM 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
F+SGV V + ++ + L +CC+ +GY A++T NA E + W ++ F +V
Sbjct: 62 FVSGVDPEVKPNEFAEQFEVSSRLMDCCVTLGYLAVDTRSNAGEVAQWMKEKEFTSARLV 121
Query: 126 THDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
T ++HM R + E+ + + ++SH L L +EY K+L +
Sbjct: 122 TTNWHMARAYSEVAGTLPAGISIVKDAVVSH-----------PDLATLFLEYNKLLASEV 170
Query: 185 QLSLS 189
L
Sbjct: 171 SQGLP 175
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 13/188 (6%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W + I + GF F + I VLTG P R++ LL
Sbjct: 14 RLWLLPALLAILVVAGFALFTGQSRARPELPLRQTDGIAVLTGGPQRVDAGLRLLAEGHA 73
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDL---AECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ ISG + + L ++ + L + +G +A +T GN QE + WAE
Sbjct: 74 RALIISGTGRDATLEELARRAGLPDPLPEGFAARVTLGREATSTRGNGQEVAEWAEARQI 133
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ +VT +HMPR LEL+R V +P+P+ + +LL EY K
Sbjct: 134 GSLRVVTAAFHMPRALLELRRTLPGVALVPHPVQAAGPRPG----------LLLREYGKF 183
Query: 180 LLLSIQLS 187
+ + LS
Sbjct: 184 IGAMLGLS 191
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEK 64
W + ++ + +GF+ F + Q A++V TG RI+R E+L+
Sbjct: 3 WRLFLLVVVAYALGFMWFAAALPQPRFEGE--TDAVIVPTGAAGRIDRGLEVLDGGKARM 60
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++GV V + + + CC+ +G+ A++T GNA E + W +N + +
Sbjct: 61 MLVTGVDPEVRPAEFAAEFEVSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRL 120
Query: 125 VTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT D+HM R EL++ ++ + + S L +L +EY K+L
Sbjct: 121 VTTDWHMRRASGELRQKLPTNIRIVEDAVASE-----------PSLGILFLEYNKLLATW 169
Query: 184 I 184
Sbjct: 170 A 170
>gi|209545186|ref|YP_002277415.1| hypothetical protein Gdia_3070 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532863|gb|ACI52800.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ GF F R + P IV LTG RIE + LL G ++ ISGV
Sbjct: 31 WGAGFAWFFRDALR-PPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHA 89
Query: 75 SKDILL---QKIPIRQDLAECC---IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 90 TTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 149
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E++R + PYPI L+ ++ +R++ EY K ++ S+ L+
Sbjct: 150 YHIRRATMEIRRTVPGIVLYPYPIQPPALQAP---LRVASVRLMATEYDKWIMASLGLTR 206
Query: 189 STQ 191
Sbjct: 207 DMD 209
>gi|162149067|ref|YP_001603528.1| hypothetical protein GDI_3297 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787644|emb|CAP57240.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 197
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSV 74
+ GF F R + P IV LTG RIE + LL G ++ ISGV
Sbjct: 15 WGAGFAWFFRDALR-PPAMPPIADGIVALTGGQGRIEASLRLLAQGRGRQLLISGVAPHA 73
Query: 75 SKDILL---QKIPIRQDLAECC---IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ + Q + + +G A +T GNA E + WA N H +++VT
Sbjct: 74 TTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAHANAIHSLIVVTAG 133
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E++R + PYPI L+ ++ +R++ EY K ++ S+ L+
Sbjct: 134 YHIRRATMEIRRTVPGIVLYPYPIQPPALQAP---LRVASVRLMATEYDKWIMASLGLTR 190
Query: 189 STQ 191
Sbjct: 191 DMD 193
>gi|296116632|ref|ZP_06835242.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
gi|295976844|gb|EFG83612.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
Length = 227
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 5/184 (2%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
V ++ + G F+R ++ V LTG RIE + +L+ ++ ISG
Sbjct: 28 VLIMSWAAGLAWFVRDARRPPRMPP-PCDGAVALTGGQGRIEASLQLMAQHRARRLLISG 86
Query: 70 VHHSVSKDILLQKIPIRQDLAEC-CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L + P L +G +A +T GNA E + W + H +++VT
Sbjct: 87 VDPHATLGDFLTRAPRVLPLEVWLRTTLGRQATSTLGNADETAQWVRAQDIHSLIVVTAG 146
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
YH+ R +E+ R V P+ + L ++ R+L++EY K LL I +
Sbjct: 147 YHIRRAMMEIARAAPGVTLYPFAVQPPALLHP---RRLATWRLLVVEYDKWLLACIDTAR 203
Query: 189 STQT 192
T+
Sbjct: 204 WTRP 207
>gi|103488367|ref|YP_617928.1| hypothetical protein Sala_2890 [Sphingopyxis alaskensis RB2256]
gi|98978444|gb|ABF54595.1| protein of unknown function DUF218 [Sphingopyxis alaskensis RB2256]
Length = 176
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ + + +++GF F + AIVV+TG P RI+RA E LE +++
Sbjct: 4 RLISLLFLVWVLGFAWFALLLPLPA--PPQKTDAIVVVTGGPGRIDRALERLEAGDAKRL 61
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
ISGV V L + L +CCI +G+ A +T NA E +AWA++ + + +V
Sbjct: 62 LISGVAREVKPRELAAEYGRPVALFDCCIALGFDAEDTRSNATEVAAWAKRRKYKSIRLV 121
Query: 126 THDYHMPRTFLEL-QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
T D+HM R E+ + + V + + S L L EY K
Sbjct: 122 TTDWHMRRAEYEIGRAVGRDVTIVTDAVRSQ-----------PNLATLFREYHKY 165
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F+ + P AIVVLTG R+E L G+K+F+ GV SV K
Sbjct: 22 FVDFVYKTFSLS-PRDTQADAIVVLTGGRGRVEEGVRLYRAGQGKKLFLIGVDPSVKKRE 80
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
L Q E + + + NT NA A K+ + ++T YHM R+ +
Sbjct: 81 LFQGDG------EGGVYLEQNSRNTLENAIYARDLIMKHKVRSIKLITSRYHMKRSTILF 134
Query: 139 QRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ V P+P+ S +L+E ++L E+ K +L
Sbjct: 135 RNALPRYVAIYPHPVDSSNLKEQ-WWRHSGSFKLLFSEFYKYCILR 179
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ + + + LI + F+ F+ + AIVVLTG R+E +L
Sbjct: 4 LKVLFSLIVLILIVLSVLFVDFVYKTFSLS-QRDVKTDAIVVLTGGRGRVEEGVKLYRGG 62
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+ +F+ GV V K L + + + + NT NA A K+
Sbjct: 63 RGKLLFLIGVDPLVKKHELYRGAGAEN------VYLEKTSRNTLENAIYARDMITKHRVS 116
Query: 121 HVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ ++T YHM R+ + + + P+P+ S +L+E ++L E+ K
Sbjct: 117 SIKLITSRYHMKRSTILFRNALPKDIAIYPHPVDSSNLKEE-WWNHKGSFKLLFSEFYKY 175
Query: 180 LLLSI 184
+L +
Sbjct: 176 CILRL 180
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 1 MRYFWYGLF-VCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEPIRIERAFELL 57
M F+ GLF + +IF ++ + F+ + + + AIVVL G R+E L
Sbjct: 1 MALFFRGLFSLLVIFLVVATVLFVDFAYKTFSVRQRDIATDAIVVLAGGRGRVEEGIRLF 60
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ G+ +F+ GV V K L Q+ + + + NT NA ++
Sbjct: 61 RAKKGKYLFLIGVDPMVRKQELFQERKGES--LADRVVLENASRNTLENALYGREIIDRK 118
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
+ + ++T YHM R L + + P+P+ + +L+E + R+L E+
Sbjct: 119 DIRSISLITSRYHMKRATLIFRSTLPRDIAIYPHPVDTINLKE-AWWRDQGSFRLLFSEF 177
Query: 177 LKILLLSIQLSLST 190
K L ++
Sbjct: 178 YKYCLFRFFFLFAS 191
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 163 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ + + + LI + F+ F+ + AIVVLTG R+E +L
Sbjct: 4 LKGLFSLMVLILIVLSVLFVDFVYKTFSLS-QRDVHADAIVVLTGGRGRVEEGVKLYRAG 62
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
G+ +F+ GV V K L Q + + + NT NA A K+
Sbjct: 63 QGKLLFLIGVDPLVKKHELYQGAGAEN------VYLEKTSRNTLENAIYARDMIMKHKVS 116
Query: 121 HVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+ ++T YHM R+ + + V P+P+ S +L+E ++L E+ K
Sbjct: 117 SIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVDSSNLKEE-WWNHKGSFKLLFSEFYKY 175
Query: 180 LLLSI 184
+L +
Sbjct: 176 CILRV 180
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDI 78
F+ F P AIVVL G R+E L + G +F+ GV +V K
Sbjct: 22 FVDFTYKTFSAR-PRQVQADAIVVLAGGKGRVEEGVRLFRERRGTWLFLVGVDPTVRKSD 80
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
L + P + + + NT NA ++ VL++T YH+ R+ +
Sbjct: 81 LYRPKPGDPP--ADNVVLEKLSRNTLENAIYGRDILAEHKVRSVLLITSRYHLKRSAILF 138
Query: 139 QRIN-STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ V PYP+ S +++E + R+L E+ K + +
Sbjct: 139 RNALAPDVALYPYPVDSSNVKEE-WWHHLGTFRLLFSEFYKYCIFRV 184
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 5/190 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
R + L + L+ + F+ F + AIVVL G RIE L
Sbjct: 5 RGIFSLLVISLVVIAVLFVDFTYKTFSLR-QRDVKSDAIVVLAGGRGRIEEGVRLYRENR 63
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+F+ GV +V K L + + + + + NT NA A ++N
Sbjct: 64 ARWLFLIGVDPAVRKGELFTERRGERSGEG--VFLENVSRNTLENALYAREMIVRHNVSS 121
Query: 122 VLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
+ ++T YHM R L +++ + P+P+ S +L+E R+L E+ K
Sbjct: 122 IKLITSRYHMKRATLIFRQVLPKDIAIYPHPVDSKNLKEE-WWSHGGSFRLLFSEFYKYC 180
Query: 181 LLSIQLSLST 190
L + ++
Sbjct: 181 LFRLFFLFAS 190
>gi|118580810|ref|YP_902060.1| hypothetical protein Ppro_2396 [Pelobacter propionicus DSM 2379]
gi|118503520|gb|ABL00003.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 198
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 4/153 (2%)
Query: 33 DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
AIVVL G R++ L G +F GV +V + L + P
Sbjct: 35 REVRADAIVVLAGGKGRVDEGVRLFRQGKGHWLFFIGVDPTVRRSDLYRPRPGDPP--AS 92
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYP 151
+ + + NT NA + N +L++T YHM R + L+ V PYP
Sbjct: 93 GVILEKASRNTLENAVYGRDVIMERNVRSILLITSRYHMKRASILLRNALPKDVAIYPYP 152
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ + +L+E + +L E+ K +
Sbjct: 153 VDTANLKE-AWWSHRSSFHLLFGEFYKYCMFRA 184
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 4/162 (2%)
Query: 36 SVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
+ AIVVL G RIE L +F+ GV SV K L ++ + +
Sbjct: 38 NCDAIVVLAGGRGRIEEGSRLYRENHARWLFLIGVDPSVRKSDLFRERKGERSGEG--VY 95
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIIS 154
+ + NT NA A N + ++T YHM R L + + + P+P+ +
Sbjct: 96 LEKVSRNTLENALYAREMIVGRNIDSIELITSRYHMKRATLIFRHVLPKDIAIYPHPVDT 155
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQF 196
+L+E R+L E+ K L + +
Sbjct: 156 KNLKEE-WWNHSGSFRLLFSEFYKYCLFRVFFLFAPTELQSA 196
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 9/195 (4%)
Query: 1 MRYFWYG----LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
M F+ G L V LI + F+ F + + AIVVL G R+E L
Sbjct: 1 MALFFRGIISLLIVVLIIVAVLFVDFAYKTFSLR-QRDVTTDAIVVLAGGRGRVEEGVRL 59
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ G +++ GV V K L + + + + + NT NA +
Sbjct: 60 FRERKGTYLYLIGVDPVVKKRDLFRDREGER--LADRVFLENLSRNTLENALYGREIIMR 117
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ ++T YHM R L +++ + P+P+ + +L+E R+L E
Sbjct: 118 KEVRSIRLITSRYHMKRATLLFRQVLPRDIAIYPHPVDTTNLKER-WWDDKGSFRLLFSE 176
Query: 176 YLKILLLSIQLSLST 190
+ K L ++
Sbjct: 177 FYKYCLFRFFFLFAS 191
>gi|157965010|ref|YP_001499834.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
gi|157844786|gb|ABV85287.1| hypothetical protein RMA_1350 [Rickettsia massiliae MTU5]
Length = 171
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE LL+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGSALLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + LL++ R + + I K ++ E N ++A + N +++V H
Sbjct: 65 TGIESTEQLKNLLKE---RNVIEQQVILAPSKIMSEEDNIKKAVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRI---NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L+++ + + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKVIHSSHNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|67459774|ref|YP_247398.1| hypothetical protein RF_1382 [Rickettsia felis URRWXCal2]
gi|67005307|gb|AAY62233.1| Uncharacterized conserved protein [Rickettsia felis URRWXCal2]
Length = 174
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ G + + Y+ + + + +A++V G +IE LL+
Sbjct: 2 IRKFLLTILAIFALWVGG-LGYYLYLINSYKLNSNTTNAVIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL++ R + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESTEQLKNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+++V H+Y+MP +L++ + +PY + S + VLL Y
Sbjct: 118 SIILVEHNYNMPFMLNKLEKAIPSSNNIYIVPYLVFSKQKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|239946686|ref|ZP_04698439.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920962|gb|EER20986.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 171
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + +I+GF + Y+ + + + +AI+V G +IE +L+
Sbjct: 2 IRKFLLTILAIFALWIVGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAMLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL++ + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAGQLKNLLKE---HSVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHD 156
+++V H+Y+MP +L++ + + YP+ +
Sbjct: 118 SIILVEHNYNMPFMLNKLKKAIPSSNNIYIVSYPVFPNK 156
>gi|15893279|ref|NP_360993.1| hypothetical protein RC1356 [Rickettsia conorii str. Malish 7]
gi|229587249|ref|YP_002845750.1| hypothetical protein RAF_ORF1242 [Rickettsia africae ESF-5]
gi|29839740|sp|Q92FX1|Y1356_RICCN RecName: Full=Uncharacterized protein RC1356
gi|15620500|gb|AAL03894.1| unknown [Rickettsia conorii str. Malish 7]
gi|228022299|gb|ACP54007.1| Unknown [Rickettsia africae ESF-5]
Length = 171
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|238651121|ref|YP_002916979.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
gi|238625219|gb|ACR47925.1| hypothetical protein RPR_07675 [Rickettsia peacockii str. Rustic]
Length = 171
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIISEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHHYLMSIL 170
>gi|157829194|ref|YP_001495436.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933919|ref|YP_001650708.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
gi|157801675|gb|ABV76928.1| hypothetical protein A1G_07445 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909006|gb|ABY73302.1| hypothetical protein RrIowa_1586 [Rickettsia rickettsii str. Iowa]
Length = 171
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFVGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ S + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYD-----------VLLKSYHRYLMSIL 170
>gi|34581055|ref|ZP_00142535.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262440|gb|EAA25944.1| unknown [Rickettsia sibirica 246]
Length = 171
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L ++ GF + Y+ + + + +AI+V G +IE L+ +FI
Sbjct: 6 LLTIFALWVGGF-GYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFI 64
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+G+ + ILL++ R + + I K ++ E N ++ + N +++V H
Sbjct: 65 TGIESTEQLKILLKE---RNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEH 121
Query: 128 DYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+Y+MP +L++ + +PYP+ + VLL Y + L+ +
Sbjct: 122 NYNMPFMLNKLEKAIPSSNNIYIVPYPVFFKQKYD-----------VLLKSYHRYLMSIL 170
>gi|157826367|ref|YP_001494087.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
gi|157800325|gb|ABV75579.1| hypothetical protein A1C_06780 [Rickettsia akari str. Hartford]
Length = 174
Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ G I + Y+ + + + +AI+V G +IE LL+
Sbjct: 2 IRKFLLTILAIFALWVGG-IGYFLYLINSYKFNSNTTNAIIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI G+ + LL++ R + + I K ++ E N ++A + N
Sbjct: 61 YAPILFIIGIESTEQLRNLLKE---RNVIEQQVILAPNKIMSEEDNIKKAVDFIVTYNLA 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
V++V ++Y+MP +L++ + + YP+ + VLL Y
Sbjct: 118 SVILVEYNYNMPFMLNKLEKEIPSSNNIYIVQYPVFFKQKYD-----------VLLKSYN 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|51474043|ref|YP_067800.1| hypothetical protein RT0866 [Rickettsia typhi str. Wilmington]
gi|51460355|gb|AAU04318.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 174
Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
++ F + V ++ GF + Y+ + + + +AI+V G +IE LL+
Sbjct: 2 IKKFLLIILVIFTLWVGGFC-YYLYLINSYKLNSNTTNAIIVFAGGGHKIETCIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL + + + I K ++ E N ++A + N
Sbjct: 61 YAPILFITGIESAEHFKNLLME---HNVIEQQVILAPNKIMSEEDNIKKAIDFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+++V H+Y++P +LQ+ V +PYP+ S + VLL Y
Sbjct: 118 FIILVEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFSTQKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|15604704|ref|NP_221222.1| hypothetical protein RP875 [Rickettsia prowazekii str. Madrid E]
gi|7388444|sp|Q9ZC92|Y875_RICPR RecName: Full=Uncharacterized protein RP875
gi|3861399|emb|CAA15298.1| unknown [Rickettsia prowazekii]
gi|292572540|gb|ADE30455.1| hypothetical protein rpr22_CDS854 [Rickettsia prowazekii Rp22]
Length = 174
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R F + ++ GF + Y+ + + + +AI+V +IE LL+
Sbjct: 2 IRKFLLIILAIFTLWVGGF-GYYLYLINSYKLNSNTTNAIIVFADGGHKIETCMALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ + LL K + + I K ++ E N +EA + N
Sbjct: 61 YAPILFITGIESTERFKNLLMK---HNVIEQQVILAPNKIMSEEDNIKEAINFIVTYNLT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS---TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
+ +V H+Y++P +LQ+ V +PYP+ S + VLL Y
Sbjct: 118 LITLVEHNYNIPFMLNKLQKAIPSSNNVYIVPYPVFSKPKYD-----------VLLKSYH 166
Query: 178 KILLL 182
+ L+
Sbjct: 167 RYLMS 171
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTGEPIRIERAFELLE 58
R FW F+ + + F+ + V+ I PS VVLTG R+ F+LL
Sbjct: 4 RSFWALAFLSAVV-LYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDLLV 62
Query: 59 NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
NQ +K+ ISGV+ + ++ P +L+E + + ++ T GNAQ++ E
Sbjct: 63 NQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEALK 122
Query: 119 FHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+L+VT HM R++ + + + II E + + L+ L
Sbjct: 123 CRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGGRFESSVWESGFEALKSLF 178
>gi|91204866|ref|YP_537221.1| hypothetical protein RBE_0051 [Rickettsia bellii RML369-C]
gi|157826504|ref|YP_001495568.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
gi|91068410|gb|ABE04132.1| unknown [Rickettsia bellii RML369-C]
gi|157801808|gb|ABV78531.1| hypothetical protein A1I_00645 [Rickettsia bellii OSU 85-389]
Length = 174
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + + GF+ + Y+ + P + +AI+V G +IE LL+
Sbjct: 2 IRKIALTILTIFAIWASGFV-YYLYLVNSYKPSSNTANAIIVFAGGGHKIETGIALLKAG 60
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+FI+G+ S LL++ + L + I + ++ E ++AS + K N
Sbjct: 61 YAPILFITGIETSDQLKNLLKENNV---LEQQVILAPNQIMSEEDYIKKASDFILKYNIT 117
Query: 121 HVLIVTHDYHMPRTFLELQRINS----TVQFIPYPIISHD 156
V +V ++Y +P L S + PYP+I+
Sbjct: 118 SVRLVAYNYDIPSIVNNLTTAISSSNNNIYIAPYPVIAKQ 157
>gi|301165835|emb|CBW25408.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 212
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 19/203 (9%)
Query: 1 MRYFWYGLFVCLIFFIMG------FISFIRYVKQMHIPD--HPSVSAIVVLTGEPIRIER 52
+RY +F+ L+ I+ F+ R Q + S IVV TG+ RI
Sbjct: 16 LRYLQNIVFISLVSIILYAIMSLIFVLIARNYNQETEKTFYNRSPDLIVVFTGDSGRIPL 75
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEA-S 111
A +L + IFI+GV+ S D LL+ + I +++ + I Y A NT N
Sbjct: 76 AVQLAKKYKQSNIFITGVYSKNSVDSLLRPLKIDEEIDTNLLTIDYLARNTVENVISTLR 135
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRIN---STVQFIPYPIISHDLEENSSIFKIKI 168
E+ +++++HDYH+ R L ++ Q Y + S ++
Sbjct: 136 HLRERKGNKKIIVISHDYHVMRIKLIFNKLMEADDDYQLYFYSVESD-------FDNMRN 188
Query: 169 LRVLLIEYLKILLLSIQLSLSTQ 191
++++ E K + L L +
Sbjct: 189 IKIVAKEVYKWIRTYGFLMLWSP 211
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 2 RYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVV----LTGEPI-----RI 50
R+ W G+ +CLIF ++ F + + DHP +A+V+ +P R+
Sbjct: 4 RWLWSGVILCLIFALLIIPFWVQASRYDDVRVADHPRDAALVLGAALWDSQPSPALRERL 63
Query: 51 ERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
+ A L + I SG +S+ +++ + Q + + + ++ NT+ N Q
Sbjct: 64 QMALSLYHKGQVQWIICSGGVGDDGISEAEGMKRYLMEQGVPPKDLLLEEESTNTKENLQ 123
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTF---------LELQRINSTVQFIPY 150
+ + N+ ++ +VTHDYHM R+ E ++S+V F PY
Sbjct: 124 YSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPAPVHSSVLFTPY 174
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 7/189 (3%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLEN 59
+R G V + + R++ P +VVL+G+ R+E AF L +
Sbjct: 32 LRNLALGTLVLAAVVWLSLPAVGRFLVVADKPAP--AEVLVVLSGDRGERLEYAFRLYQE 89
Query: 60 QIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ +++ +SG + +++ LL++ + + E I + +A NT NA + E
Sbjct: 90 GLADRLLLSGGPLYADLTEADLLRRHALMLGVPEYKIIMEPRATNTYQNALYSREMMEYY 149
Query: 118 NFHHVLIVTHDYHMP--RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++++ YHM R + S ++ + P+ + RV+L E
Sbjct: 150 GLDSAIVISSPYHMRRVRALFDEVYRGSDIRLVYLPVEDSWFDPERWWESAAGRRVVLAE 209
Query: 176 YLKILLLSI 184
YL++ +L +
Sbjct: 210 YLRLTMLVL 218
>gi|167957605|ref|ZP_02544679.1| hypothetical protein cdiviTM7_02994 [candidate division TM7
single-cell isolate TM7c]
Length = 204
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 6/155 (3%)
Query: 36 SVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLA 90
V AIV ++G R + A +L +N + SG S ++K +++ +
Sbjct: 46 RVDAIVAVSGGDTDARTDEAVKLYKNGWSNLLIFSGAAADKTGPSNAKAMRKHALKKGVP 105
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ-RINSTVQFIP 149
+ I I + T+ NA+ + + +++VT YH R +E + V+ I
Sbjct: 106 DSAIVIEENSNTTQENARLSRNVFSERKISRIILVTSAYHQRRAGIEFRLAAGGNVEVIN 165
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+P+ N + + E +KI+
Sbjct: 166 HPVAQDKQWSNWWWISPNGWWLAMSEIIKIIATYA 200
>gi|163857424|ref|YP_001631722.1| hypothetical protein Bpet3112 [Bordetella petrii DSM 12804]
gi|163261152|emb|CAP43454.1| conserved hypothetical protein [Bordetella petrii]
Length = 252
Score = 97.6 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 27/208 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
+ ++ G + + + + P+ AIVVL G
Sbjct: 44 WVLAWSLPATSLWLGG--ALESRYPHLPVAELPTADAIVVLGGNTANGRANWFLPYDKET 101
Query: 49 ---RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A +L + K+ +SG VS+ + + +Q + E + + + T
Sbjct: 102 AVVRVDTAIKLYQAHRAPKVVLSGGALEGDVSEARGMAFLMKQQGVPEDALLLENSSRTT 161
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLEEN 160
NA +++ F +L+VT HMPR + P ++ D +
Sbjct: 162 YENAMLTEEELKEHGFGKILLVTSALHMPRAMAAFSKQGVAAIPASTPPQIVLPPDGSVS 221
Query: 161 SSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ ++ L R ++ EY +L+ ++
Sbjct: 222 PWLPHMRTLDASRSIIKEYAGLLVYWLR 249
>gi|294498420|ref|YP_003562120.1| hypothetical protein BMQ_1655 [Bacillus megaterium QM B1551]
gi|294348357|gb|ADE68686.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 198
Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 8/173 (4%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + F F + + I+VL+G+ R+E+ EL + + +S
Sbjct: 13 IFMLGLGIIFFLFAGK-ELVVNEKPVKSDVIIVLSGDNDRLEKGIELYKKGYAAHLILS- 70
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ ++ + + E I + A +T NA+ +F ++V+ +Y
Sbjct: 71 ---NGQENNFYHQAKES-GIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNY 126
Query: 130 HMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HM R + +Q S +V EY+K++
Sbjct: 127 HMKRAEKNFNKEFKDTQIQLTYCSSGSRYYNPQRWWETALNRKVTYTEYVKLI 179
>gi|187478721|ref|YP_786745.1| membrane protein [Bordetella avium 197N]
gi|115423307|emb|CAJ49841.1| putative membrane protein [Bordetella avium 197N]
Length = 254
Score = 96.5 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 27/208 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-------------- 48
+ ++ G + + P+ AIVVL G
Sbjct: 46 WVLVWSLPATSLWLGG--ALEHRYPYLEPDSAPTADAIVVLGGNTANGRANWFLPYDKDT 103
Query: 49 ---RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R++ A +L K+ +SG +VS+ + ++ + + + + + NT
Sbjct: 104 AVVRVDTATDLYLADRAPKVVLSGGALEGNVSEAQGMAHRMRQRGVPDSALVLENASRNT 163
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLEEN 160
NA N+ VL+VT HMPR + P P + D +
Sbjct: 164 YENAALTEDTLRANHISKVLLVTSALHMPRAMAAFSKQGVEAIAAPTPPQIVPPTDGSLS 223
Query: 161 SSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ ++ L R ++ EY +L+ ++
Sbjct: 224 PWMPDMRTLDASRSIIKEYAGLLVYWLR 251
>gi|295703757|ref|YP_003596832.1| hypothetical protein BMD_1626 [Bacillus megaterium DSM 319]
gi|294801416|gb|ADF38482.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 198
Score = 95.7 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 8/173 (4%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + F F + + I+VL+G+ R+E+ EL + + +S
Sbjct: 13 IFMLGLGIIFFLFAGK-ELVVNEKPVKSDVIIVLSGDNDRLEKGIELYKKGYASHLILS- 70
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ ++ + + E I + A +T NA+ +F ++V+ +Y
Sbjct: 71 ---NGQENNFYHQAKES-GIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNY 126
Query: 130 HMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
HM R + +Q S +V EY+K++
Sbjct: 127 HMKRVEKNFNKEFKDTQIQLTYCSSGSRYYNPQRWWETALNRKVTYTEYVKLI 179
>gi|293604449|ref|ZP_06686856.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817326|gb|EFF76400.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + D P+ AIVVL G
Sbjct: 44 LLWALAWSLPVTSLWLGG--ALENRYPHLAPADSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A +L K+ +SG VS+ + +Q + E + + +
Sbjct: 102 DTAVVRVDTAAQLYLAGRAPKVLLSGGALEGDVSEARGMAHAIRQQGVPESALILENSSR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA + VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDALKSRGITKVLLVTSALHMPRAMAAFSKQGVEAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWVPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 35/219 (15%)
Query: 5 WYGLFVCLIFFIMG--FIS--FIRYVKQMHIP----DHPSVS-AIVV------------- 42
+ +CL ++ FI+ + +++ + P D P V AIV+
Sbjct: 40 FLFFIICLFLYLASSSFIANRLVTELEKEYPPVSLQDAPKVDVAIVLGGMIQTISSVKAR 99
Query: 43 --LTGEPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCID 95
LT RI A L + +KI +G + + L + + I + E I
Sbjct: 100 PELTDSADRITDAIRLYKAGKVKKILFTGGSGLLLSDTYREADLAKSLFIDLGVKEEDII 159
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + NT NA E + NF L++T +HM R+ Q+ N V P S
Sbjct: 160 LENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQNLNVFPFPTDYRSF 219
Query: 156 DLEEN------SSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ + S + + + + E++ + + L
Sbjct: 220 NTDSGAFELYLPSAGYLDLTTLSIKEWVGYFVYRTKSYL 258
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 92.2 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 87/220 (39%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGF------ISFIRYVKQMHI----PDHPSVSAIVVLTG----E 46
+R + + V + + + + + ++Q+H + P+ AIVVL G
Sbjct: 32 LRKTAFVIAVAGLSWALFWSLPASSLWAGGRLEQLHPYEQAANAPTAQAIVVLGGHTANG 91
Query: 47 PI-------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
RI++A L + Q I +SG +VS+ ++ + D+ E
Sbjct: 92 RQNWFEPYDKATAIARIDKAANLYKAQRAPLIVVSGAALEGNVSEAQIMANALKQHDIPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
I + ++ T NA + + + ++L+VT HMPR ++ P
Sbjct: 152 SAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTSALHMPRAMAVFKKQGIAAIAAPLA 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
++ D + ++ L R ++ EY+ +L+ ++
Sbjct: 212 PQIVVPDDPGFSFWQPDMRSLAASRSIVKEYVGLLVYWVR 251
>gi|33596348|ref|NP_883991.1| hypothetical protein BPP1716 [Bordetella parapertussis 12822]
gi|33602366|ref|NP_889926.1| hypothetical protein BB3392 [Bordetella bronchiseptica RB50]
gi|33566117|emb|CAE37017.1| conserved hypothetical membrane protein [Bordetella parapertussis]
gi|33576805|emb|CAE33884.1| conserved hypothetical membrane protein [Bordetella bronchiseptica
RB50]
Length = 254
Score = 91.5 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + P+ AIVVL G
Sbjct: 44 LLWALAWSLPATSLWLGG--ALESRYPHLPPDQSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A EL + K+ +SG +S+ + + + E + + +
Sbjct: 102 ETAVVRVDTATELFQAGRAPKVVLSGGALEGDISEARGMAYRMRQHGVPESALILENASR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA ++ VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWLPDQRSFDASRSIIKEYAGLFVYWLR 251
>gi|33593317|ref|NP_880961.1| hypothetical protein BP2323 [Bordetella pertussis Tohama I]
gi|33572673|emb|CAE42596.1| conserved hypothetical membrane protein [Bordetella pertussis
Tohama I]
gi|332382726|gb|AEE67573.1| hypothetical protein BPTD_2282 [Bordetella pertussis CS]
Length = 254
Score = 91.5 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI------------ 48
+ + ++ G + + P+ AIVVL G
Sbjct: 44 LLWALAWSLPATSLWLGG--ALESRYPHLPPDQSPTADAIVVLGGNTANGRANWFLPYDK 101
Query: 49 -----RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++ A EL + K+ +SG +S+ + + + E + + +
Sbjct: 102 ETAVVRVDTATELFQAGRASKVVLSGGALEGDISEARGMAYRMRQHGVPESALILENASR 161
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDLE 158
T NA ++ VL+VT HMPR + P P + D
Sbjct: 162 TTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPADGS 221
Query: 159 ENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ + + R ++ EY + + ++
Sbjct: 222 LSPWLPDQRSFDASRSIIKEYAGLFVYWLR 251
>gi|317407644|gb|EFV87583.1| hypothetical protein HMPREF0005_04608 [Achromobacter xylosoxidans
C54]
Length = 254
Score = 91.1 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGF----------ISFIRYVKQMHIPDHPSVSAIVVLTGEPI-- 48
+R L + + + + + + + + P+ AIVVL G
Sbjct: 32 LRKTGGALILAGLLWALAWSLPVTSLWLGGALENRYPHLPPAESPTADAIVVLGGNTANG 91
Query: 49 ---------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
R++ A +L K+ +SG VS+ + +Q + E
Sbjct: 92 RANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVVLSGGALEGDVSEARGMAHAIRQQGVPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T NA + VL+VT HMPR + P P
Sbjct: 152 SALILENASRTTYENAALTEDQLKTRGIGKVLLVTSALHMPRAMAAFSKQGVIAIAAPAP 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ D N + + R ++ EY + + ++
Sbjct: 212 PQIVAPADGSLNPWLPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|311105207|ref|YP_003978060.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
gi|310759896|gb|ADP15345.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
Length = 254
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 35/220 (15%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV----------KQMHIPDHPSVSAIVVLTGEPI-- 48
+R L V + + + + + + + P+ AIVVL G
Sbjct: 32 LRKTGGALIVAGLLWALAWSLPATSLWLGGALESRYPHLAPSESPTADAIVVLGGNTANG 91
Query: 49 ---------------RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAE 91
R++ A +L K+ +SG VS+ + +Q + E
Sbjct: 92 RANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVLLSGGALEGDVSEARGMAHAIRQQGVPE 151
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + T NA + VL+VT HMPR + P P
Sbjct: 152 TALILENSSRTTYENAALTEDQLKSRGIGKVLLVTSALHMPRAMAAFSKQGVEAVAAPAP 211
Query: 152 ---IISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
+ D + + R ++ EY + + ++
Sbjct: 212 PQIVAPADGSLPLWLPDQRTFDASRSIIKEYAGLFVYWLR 251
>gi|254423832|ref|ZP_05037550.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191321|gb|EDX86285.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 263
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 78/235 (33%), Gaps = 54/235 (22%)
Query: 3 YFWY-----GLFVCLIFFIMGF---------ISFIRYVKQMHIPDHPSVSAIVVLTGE-- 46
+ W + L FI+ F + + P+ AIVVL G
Sbjct: 28 WLWRHPRRASGAIALALFILFFSSNPIVSNKLLSSLEWRYFPPDPVPTADAIVVLGGATV 87
Query: 47 --------------PIRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIR 86
RI A L K+ +SG S+ ++ +
Sbjct: 88 PAIAPRPWVEVSEAGDRILYAARLYNQGRAPKLILSGGRVQWRGGSDESEADDMKAFAMA 147
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
++ E I + +LNT NA + VL+VT HMPR+ Q++ +
Sbjct: 148 MNVPEADIILEETSLNTRQNAVNVKKILAAQSIDSVLLVTSAVHMPRSVAIFQKL--DID 205
Query: 147 FIPYP----IISHDLEENSSIFKIKILRVL------------LIEYLKILLLSIQ 185
IP P + + E + +IL +L + EY+ ++ ++
Sbjct: 206 VIPAPTDYLVTTPSDESGEITIEGRILSLLPRAEATGRFTRAMKEYVGFVIYRLR 260
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 88.0 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 38 SAIVVLTGE---PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
AIVVL G RI+ A L + I + + I G VS + +K+ + E +
Sbjct: 3 DAIVVLGGGKLSEGRIDEAIRLYKQGIAKYLIIVGGKEEVS--EMYKKVRSKIQNIEN-V 59
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ +L+T NA A EK N +LIVT ++H+ R
Sbjct: 60 YVDNNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIKRAL 100
>gi|188996942|ref|YP_001931193.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932009|gb|ACD66639.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 242
Score = 87.6 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 22/176 (12%)
Query: 32 PDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSK--DI 78
P + S IVVL G R+ F +L ++ I +SG +
Sbjct: 69 PKNISGDVIVVLGGGSYNTGILTEDSLKRVLTGF-VLHKRLNVPIILSGGSAITNLPESE 127
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
++ + + + I ++ +T NA +K + V++VT YHMPR+++
Sbjct: 128 AMKSLLAELGIDKKMIFTDVQSRDTLENAFFTKKICKKYGYKTVILVTSAYHMPRSYMTF 187
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVL------LIEYLKILLLSIQLSL 188
++ V IPYP ++ + + VL + EY+ + ++ S
Sbjct: 188 KQAGLNV--IPYPTDFKMDKKYTVYSYFPKMNVLQDSTKAIREYIGLFAYYLRFSF 241
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 87.6 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 10 VCLIFFIMGFISFIRYVKQM------------HIPDHPSVSAIVVLTGEP---------- 47
+ ++ F+ F ++ ++ + IP+ + IVVL G
Sbjct: 35 IFIVSFLSAFFIYLLSIEPVKDSLLRPLETKYPIPNKLNGDVIVVLGGGSYNTGILTEDS 94
Query: 48 -IRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ F +L ++ I +SG + +++ I + + I + +T
Sbjct: 95 LKRVLTGF-VLHKKLNLPIILSGGSAITNLPEAEVMKNILNELGVDKSMIYTDVNSRDTL 153
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
GNA EKN F +++VT YHMPR+ + Q+ V IPYP + +
Sbjct: 154 GNAFFVKKICEKNGFKRIILVTSAYHMPRSVIVFQKAGLDV--IPYPTDFKMDKRYTVYS 211
Query: 165 KIKILRVL------LIEYLKILLLSI 184
+ VL + EY+ ++ +
Sbjct: 212 YFPKMNVLQDSTKAIREYVGLIAYQL 237
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 20/176 (11%)
Query: 31 IPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
+P+ AIVVL G R+ A +L + G I +SG ++ +
Sbjct: 68 VPEKFQADAIVVLGGGSYSTGILKEDSMKRLLTAL-ILHKRTGLPIVLSGGAENLPDAEI 126
Query: 80 LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
++ + + + + I ++ +TE NA ++ N+ V++VT YH+PR +
Sbjct: 127 MKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLVTSAYHLPRAVFLFK 186
Query: 140 RINSTVQFIPYPIISHDLEENSSIFKIKILRVL------LIEYLKILLLSIQLSLS 189
+ + IPYP + + + VL L EY+ +L L + L
Sbjct: 187 K--EGLSVIPYPTDFKRDLRYNLYSLLPKMSVLNDSVKALREYVALLSLRLPEWLP 240
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 75/199 (37%), Gaps = 32/199 (16%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------------IRIERAFELL 57
+ G + KQ P IVVL G R+ A L
Sbjct: 54 LAGDLLISSLEKQYPQPRTVQGDVIVVLGGGATQGTPDINGQGNLLGSAANRLLTAARL- 112
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
G I SG S ++ + Q+ + + I I ++LNT+ NA S
Sbjct: 113 HEATGLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDILIENRSLNTQQNAVYTSQIL 172
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IISHDL-----EENSSIFKI 166
EK+ ++VT +HMPR LE QR VQ I YP + S L + + S +
Sbjct: 173 EKHQLTRPVLVTSAFHMPRAALEFQRA--GVQAIAYPTDYLASEKLSLYAGKLSPSAGAM 230
Query: 167 KILRVLLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 231 STTGTALKEYLGILALKLK 249
>gi|254481130|ref|ZP_05094376.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038925|gb|EEB79586.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 245
Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 73/212 (34%), Gaps = 33/212 (15%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------------P 47
L+ C + F+ P V AIVVL G
Sbjct: 38 VWLYACSTALVADFLMASLEDDFRPKAMSVVPKVDAIVVLGGATRGDTYWSSMADLNAAA 97
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ A L + + + +SG + S+ L+ + L + + + ++L+T+
Sbjct: 98 DRLTHAVSLYKAKKAPLVLLSGGSTTGSRPEAEQLRDYMVLMGLPDRALLMERQSLDTQQ 157
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV--------QFIPYPIISHDL 157
NA+ ++ + + +L+VT YHM R +R V + + P + L
Sbjct: 158 NARYSALILQGRDVRRILLVTSAYHMSRAVPLFERQGFEVIPAPTDYQRLVGKPAVPRWL 217
Query: 158 E-ENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ EY+ L Q L
Sbjct: 218 PTADDLWRSTAAIK----EYVGFLYYRAQGWL 245
>gi|317485960|ref|ZP_07944815.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316922733|gb|EFV43964.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 185
Score = 84.5 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 14/194 (7%)
Query: 1 MRYFWYG----LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFE 55
M WYG L + + I + +P IVVL GE R+ A E
Sbjct: 1 MGQGWYGAIGKLAIAALLIGAVLIWRAEAWLHVDVPLE-HADVIVVLGGESGQRVIGAAE 59
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + K+F++G S ++++++ + C ++ +T NA E
Sbjct: 60 LYHQGVAPKVFVTG---SGDGGLIVRRLGMAGVPDAAC---ESQSRSTYENAVLTKKALE 113
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++ V++VT +H R + + V F +P+ + F+I + + E
Sbjct: 114 ASHPRSVMLVTSWFHSRRALAVFRDVWPEVTFGVHPVYAGATFTAR--FRIYEMGYIFSE 171
Query: 176 YLKILLLSIQLSLS 189
Y+K L ++ ++
Sbjct: 172 YVKTLWYMVRYGIA 185
>gi|239833683|ref|ZP_04682011.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821746|gb|EEQ93315.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 83.8 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 11/187 (5%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIG 62
+ C I F + + F + V + D IVV G P R +A L +
Sbjct: 2 MLLVVLPCAILFGIAAMFFSQPVLTLQ-DDGGRADVIVVPGGDGPPRAAQAARLWKEGRS 60
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQD-LAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + ++ + + + C ++ +T NAQ ++ +
Sbjct: 61 PVILVTGDGDCLYNKRIMVRNGVNPSAIFVEC-----QSGSTWQNAQFSAPVLREIRARS 115
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--I 179
L+VT+ YH R + ++FI PI D + ++ EY+K
Sbjct: 116 ALVVTNWYHSRRAIASFRAACPQMRFISSPIGGDDGR-PGFPATPADMELVAKEYVKLGW 174
Query: 180 LLLSIQL 186
L+S ++
Sbjct: 175 YLVSGRI 181
>gi|153010699|ref|YP_001371913.1| hypothetical protein Oant_3378 [Ochrobactrum anthropi ATCC 49188]
gi|151562587|gb|ABS16084.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 206
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 9/174 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIF 66
+ C + F + + F V + D IVV G P R A L + I
Sbjct: 6 ILPCAVLFGLVAMFFSEPVLTLQ-DDGGRADVIVVPGGDGPPRAAEAARLWKEGRSPVIL 64
Query: 67 ISGVHHSVSKDILLQKIPI-RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++G +S ++ + + + C ++ +T NA+ ++ + LIV
Sbjct: 65 VTGDGDCLSNKRIMVRKGVTPSAIFVEC-----QSGSTWQNARFSAPLMREIQARSALIV 119
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
T+ YH R + ++FI PI D + +++ EY+K+
Sbjct: 120 TNWYHSRRAIASFRAACPQMRFISSPIGGDDGR-PGFPTTPTDMELVVKEYVKL 172
>gi|78045108|ref|YP_360909.1| hypothetical protein CHY_2090 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997223|gb|ABB16122.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 203
Score = 82.6 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 17/196 (8%)
Query: 3 YFWYGLFVCLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PIRI 50
+ ++GL + + F +++ + + A+VVL+G R+
Sbjct: 8 FAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLGESTRERL 67
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
L +N G + +SG + L+ K +++ + + + + NT N
Sbjct: 68 NLGINLWKNDYGRYLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSENTYENVL 127
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
+ +N + +L+VT YH R + YP + +L + +++
Sbjct: 128 LTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNATVV-YP--AGELPNARGLLRLRQ 184
Query: 169 LRVLLIEYLKILLLSI 184
V++ EYLK+L I
Sbjct: 185 TIVVVEEYLKLLYYFI 200
>gi|270157480|ref|ZP_06186137.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164131|ref|YP_003454269.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
gi|269989505|gb|EEZ95759.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857304|emb|CBJ11131.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
Length = 197
Score = 82.2 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 8 LFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVL-TGEPI----------RIERAF 54
+F+ + G F + ++ + I+VL T R++ A
Sbjct: 7 VFIFFLILSAGIYFSLALYIIRNAEKDEKKHADVIIVLGTKSYHGDKYNPCLVARVQHAV 66
Query: 55 ELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
+L + K+ SG + S+ ++++I + ++E I + + +T N +
Sbjct: 67 DLYKANYAPKLLFSGGKDTKNGPSEAQVMKEIALHLGVSEQDILLESASASTYENLLFSE 126
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRV 171
F+ +L+VT +H+PR L Q++ V S ++ R
Sbjct: 127 KIVSAKKFNSILLVTEPFHLPRAILVAQKLGLKVS------GSPAIQSLCWQKNSYFSRH 180
Query: 172 LLIEYLKILLLSIQLSL 188
L E L I+ I+ L
Sbjct: 181 FLREPLAIIYYKIKNQL 197
>gi|147677433|ref|YP_001211648.1| hypothetical protein PTH_1098 [Pelotomaculum thermopropionicum SI]
gi|146273530|dbj|BAF59279.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 148
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 5/148 (3%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
I+ L G+ R A EL + +I +SG + + + + E I + K
Sbjct: 2 IIALGGDSERELYAAELYRRGLAPRIIMSGCGSAAKQ---MAMKAAAAGVGEQDIIVENK 58
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST--VQFIPYPIISHDL 157
+ +T NA F ++VT YHM R L +R+ V+ +
Sbjct: 59 SGSTYQNALYTKDIVLSRGFKSAIVVTSPYHMRRARLVFERVFRNTGVKLFYCAAKNSGF 118
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ ++ L E++K++ +
Sbjct: 119 NADGRCSSKADRQITLREWIKLVYYWFR 146
>gi|163783486|ref|ZP_02178477.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881250|gb|EDP74763.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
Length = 239
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 24/185 (12%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFIS 68
+ F P IVVL G R+ F LL + G+ + +S
Sbjct: 57 VLFYPLESPFKTPKRIRGDVIVVLGGGAYNSGYLKASSYKRLIAGF-LLHRRTGKPLILS 115
Query: 69 G-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G V +++++ + + E I ++ +T NA+ EK +
Sbjct: 116 GGAAIGVIPEAK---VMKELLLEFGVEEKDIYADLRSRDTYENAKYVRNICEKIGCRSIT 172
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPI-ISHDLEENSSIFKIKIL---RVLLIEYLKI 179
+VT +HM R + ++ VQ P + S+ K + + + EY+ +
Sbjct: 173 LVTSAFHMRRALMVFKKTGLEVQPYPTDLKFEGRYNLYSAFPKYSVFYDSSIAIREYVGL 232
Query: 180 LLLSI 184
L S+
Sbjct: 233 LFYSL 237
>gi|320161035|ref|YP_004174259.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
gi|319994888|dbj|BAJ63659.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
Length = 202
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 13/184 (7%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFI 67
+C+ F++G I + + P AIVVL+G R+E+A L++ + +
Sbjct: 21 LCITPFLLGSIGSLLVISTPLQP----ADAIVVLSGGRDLQRLEKAVNLMKEGQAGYLIL 76
Query: 68 SGVHHSV-----SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
+ + D L + R + + NTE A + + +
Sbjct: 77 TKTEDITESGRQTADYLASEAHQRGIPVPKIVITQKTSKNTEQEAIATLEILRERGWKTL 136
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIIS--HDLEENSSIFKIKILRVLLIEYLKIL 180
++VT YH R+ + + + Y + S D+ R + E L +L
Sbjct: 137 IVVTDPYHTLRSRIIFREVMRKDSIKVYTVPSKKPDVPSWLWYIDGNSRRAVWREILSLL 196
Query: 181 LLSI 184
+
Sbjct: 197 AYLL 200
>gi|269963292|ref|ZP_06177623.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
gi|269831931|gb|EEZ86059.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
Length = 207
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A L + + K+ +SG + ++ + +++ + + + I + A NT
Sbjct: 62 KMPTAVRLYKEKKVSKLLLSGGNLAIDQKPEFESMKEYALDNGVPDSDIILERHAKNTVE 121
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINST-VQFIPYPIISHDLEENSS 162
NAQ +S ++ V I+T +H+ R + ++ Y + ++
Sbjct: 122 NAQYSSEIILESEIAKRSVAILTTAFHIKRAKYLFKNALPQYLELHSYFVNDRSTRRDNW 181
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ I RV+ E +K L +
Sbjct: 182 WLTESAISRVMHSHEVIKRLGVK 204
>gi|325681016|ref|ZP_08160548.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
gi|324107245|gb|EGC01529.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
Length = 193
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 14/168 (8%)
Query: 33 DHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVH-HSVSKDIL-----LQK 82
D + I+VL G R+ A L ++ + SG + + ++
Sbjct: 27 DGSAADLIMVL-GSRKACEYRVPEAVRLYKSGRAPMMLFSGGKVQKTALGEMAEWLSMET 85
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK--NNFHHVLIVTHDYHMPRTFLELQR 140
I ++E I + ++NT N + + + +++VT YHM R L ++
Sbjct: 86 AAISLGVSERDILLEKCSMNTAENFSCSENLLREVLPDGGRIILVTTAYHMRRALLTAEK 145
Query: 141 INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
I +FI P+ + + K R +L E+ K L I+ +
Sbjct: 146 ILPQYEFISCPVQKGSATKENWYKTDKGRRTVLDEWGK-LRYYIRAGI 192
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 81.4 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 20/184 (10%)
Query: 11 CLIFFIMGFISFIRYVKQMHIP-----DHPSVSAIVVL-----TGEP------IRIERAF 54
+I I F F P H +VL T R++ A
Sbjct: 1 MMIIIICLFFLFASCYPYHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSRIQKQRMDHAI 60
Query: 55 ELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + +KI ISG V + + +++ I Q++ E I + A NT N + A+
Sbjct: 61 TLYQKGSIQKILISGAAVANCFIEAEVMKDYAIAQNVPEKDILLEKYAKNTYENLKYAAD 120
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
K++F +IVT +H+ R Q+ + F YP+ + + +++ L
Sbjct: 121 LCNKHHFSKTIIVTSGFHIRRAGFFAQKFLTDFTF--YPVSEKENQRYFITEYLRMWNTL 178
Query: 173 LIEY 176
E+
Sbjct: 179 YYEW 182
>gi|116329099|ref|YP_798819.1| hypothetical protein LBL_2520 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330291|ref|YP_800009.1| hypothetical protein LBJ_0560 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121843|gb|ABJ79886.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123980|gb|ABJ75251.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 273
Score = 81.1 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 30/195 (15%)
Query: 25 YVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFIS 68
Y + + P I+VL G R+ L + KI S
Sbjct: 68 YYPPLPLEQVPRADVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKKAPKILFS 127
Query: 69 GV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + +V + + + + + + + K+ NT N A +K+ + V+
Sbjct: 128 GGSGNLLYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTVENKNFAVELLKKHGWSSVI 187
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPII----SHDLEENSSIFKIKILR---VLLIEY 176
+VT +HM R+ Q + IP+P L ++ L + + E+
Sbjct: 188 LVTSSFHMKRSVEIFQE--KGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTISIKEW 245
Query: 177 LKILLLSIQLSLSTQ 191
+ IL+ I+ ++S Q
Sbjct: 246 IGILVHKIRTTISIQ 260
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 81.1 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P+ I+VL G R+ A L + ++G I +SG
Sbjct: 12 PPKHLPNADVIIVLGGGATGDTPDVTGTGTLCSIPANRLLTAVRL-QKKLGIPIIVSGGQ 70
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
S + + ++I ++E I + ++LNT NA+ ++ + + L+VT
Sbjct: 71 IYEDSGREADIARRILKELGVSEDMILLENRSLNTTQNAEYSTNILKSRKYKQPLLVTSA 130
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ V IPYP
Sbjct: 131 FHMERAVVNFNKL--GVDVIPYP 151
>gi|304309671|ref|YP_003809269.1| hypothetical protein HDN1F_00190 [gamma proteobacterium HdN1]
gi|301795404|emb|CBL43602.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 256
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 28/171 (16%)
Query: 5 WYGLFVCL-----IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------- 46
+ GL V + + + + S + + P IVVL G
Sbjct: 41 FLGLVVLVFASMPLVAVGLWKSLEGRYPILVPSEQPKADVIVVLGGGIALPEPPQVVPDL 100
Query: 47 ---PIRIERAFELLENQIGEKIFISG--VHHS---VSKDILLQKIPIRQDLAECCIDIGY 98
R+ A EL + +SG V S+ +K+ R + I +
Sbjct: 101 NDAADRVWYAAELYHAGKAPWVVVSGGQVFPRSGLESEAEYHRKLLERMGVPAEAILVES 160
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
+ +T GNA +A + F L+VT HMPR L + V +P
Sbjct: 161 ASRDTAGNAMLTAALMRERKFQKALLVTSAAHMPRAVLLFEHA--GVDVVP 209
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 21 SFIRYVKQMHI-PDHPSVSAIVVLTGEP------------------IRIERAFELLENQI 61
F+ +++ + P+HP I++L G R+ A L
Sbjct: 66 LFMGSLERTYPVPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRL-HRLY 124
Query: 62 GEKIFISG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G I +SG V ++ + +++ I + E I ++L T NA+ ++ +
Sbjct: 125 GLPILLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTRQNARYSAEILHREG 184
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
F H ++VT +H+PR L +++ ++ PYP
Sbjct: 185 FTHPILVTSAFHLPRAVLNFEKL--GIEVTPYP 215
>gi|37523632|ref|NP_927009.1| hypothetical protein gll4063 [Gloeobacter violaceus PCC 7421]
gi|35214637|dbj|BAC92004.1| gll4063 [Gloeobacter violaceus PCC 7421]
Length = 260
Score = 80.7 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 37/216 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------E 46
W G F S ++ + ++PS AIVVL G
Sbjct: 46 VLWLGSFSAPAVADALLWSLESQYPEVPVENNPSAQAIVVLGGALHLPNARHRTYELAES 105
Query: 47 PIRIERAFELLENQIGEKIFISGVHH-----------SVSKDILLQKIPIRQDLAECCID 95
R+ A L + + +SG + + +++ + I
Sbjct: 106 SDRVLHAARLFKAGKAPVVLMSGGNPPFHTRPDQPPEATQMAAFARELGVPAGA----IL 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
++ NT NA ++ + +L+VT HMPR+ +R V + S
Sbjct: 162 TEERSWNTFQNAAFSAEVLKARRMTRILLVTSASHMPRSVAIFERAGFAVIAASTDVRSG 221
Query: 156 ---DLEENSSIFKIKILR---VLLIEYLKILLLSIQ 185
D + + L + L E++ +L+ ++
Sbjct: 222 TDLDDWLLAWLPSAAALESSTLALKEWVGLLVYRLR 257
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 48/205 (23%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIF 66
+ + P AIVVL G RI +L +
Sbjct: 35 SLETQNLPPTPIPQTRAIVVLGGGIKPALPPRPWVEVGEAGDRILYGSQLYRQGKAPWLI 94
Query: 67 ISG--VH-------HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+SG V S + Q + + I +LNT NA + N
Sbjct: 95 LSGGRVEWKGGGPPESADMAEIAQAMGVPTSA----ILQDPTSLNTYQNAVNVRKILKDN 150
Query: 118 NF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL 172
N +L+VT HMPR+ L QR ++ IP P I D+E + S F+ +L +L
Sbjct: 151 NILGPILLVTSALHMPRSLLIFQR--QGIETIPAPTDFSITQQDMEASQSSFQAVLLNLL 208
Query: 173 ------------LIEYLKILLLSIQ 185
L EY+ + + ++
Sbjct: 209 PDAYNLQQSTKALKEYIGLAVYRLR 233
>gi|296133679|ref|YP_003640926.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296032257|gb|ADG83025.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 202
Score = 79.9 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 15/196 (7%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRI 50
R LF + + + + AIVVL+G R
Sbjct: 6 RNLVITLFTGFLILLYTPLIQYAASPLIVKDPLQKADAIVVLSGGWKAKGVLGTSTLERY 65
Query: 51 ERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNAQ 108
+ +L + + I SG + + + + +T N
Sbjct: 66 QYGIKLFQKKFAPVIIFSGGNLLGRPAEADAMADMALSAGFPYEAVISENASASTYENVL 125
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI 168
+ ++ +++VT YH R + + V+ P+ + + E+ + + ++K+
Sbjct: 126 FTTKILQEKRLKSIILVTSPYHTYRAKKMFE--DKQVKVTAAPVPNGEFEKANGLERLKL 183
Query: 169 LRVLLIEYLKILLLSI 184
+ +++EY K+L+ +
Sbjct: 184 AKNIVLEYGKLLVYEV 199
>gi|320161712|ref|YP_004174937.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
gi|319995566|dbj|BAJ64337.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
Length = 264
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 54/235 (22%)
Query: 2 RYFWYGLFVCLIF-----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------- 46
R + GL + ++ ++ ++ + + S A+VVL G
Sbjct: 36 RNLFTGLALFILLVSSNRWVATTLARSLEWQYLPNEPISSAPAMVVLGGGTEPAFPPRSQ 95
Query: 47 ------PIRIERAFELLENQIGEKIFISGVH----------HSVSKDILLQKIPIRQDLA 90
R+ A L + + +SG + + LL+ + + +
Sbjct: 96 PEVNSAGDRVLYAAALYQQGKAPLVIVSGGNVAFRGEQSSTPASDMRHLLKMLGVPPEA- 154
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP- 149
I ++ NT NA + ++ + V++VT HMPR+ ++ ++ IP
Sbjct: 155 ---ILEEDQSQNTYENALYCAKLLKERHIQRVILVTSALHMPRSVKLFEK--QGIEVIPA 209
Query: 150 ---YPIISHDLEENSSIFKIKILRVL-------------LIEYLKILLLSIQLSL 188
+ + + E+ L L L EY+ IL+ ++ L
Sbjct: 210 PADFAVPFQEWEDLLHAPIPAQLVALLPSSSNLQLTTNVLHEYIGILVYWMRGWL 264
>gi|288574503|ref|ZP_06392860.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570244|gb|EFC91801.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 270
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEG 105
R+ L + G I +SG + + + + IR+ + I + + T
Sbjct: 108 QRLIEGASL-ARRKGYPILLSGGLSYDKSESIARSMERSIRKWGYKGEIMLEENSRTTWE 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS--HDLEENS-- 161
N +++ + +++VT+ +HM R+ ++ ++ PY I S D++ +
Sbjct: 167 NMTYSASILRRKGIDRIILVTNSFHMKRSLWMAKKAMPDIEVYPYAIGSLADDMDSDPLK 226
Query: 162 SIFKIKILR---VLLIEYLKILLLSI 184
I LR + E + + + I
Sbjct: 227 WIPTAGALRDSSLAWKEIVGLTVYRI 252
>gi|218288615|ref|ZP_03492892.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218241272|gb|EED08447.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 199
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 17/163 (10%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISFIRYVKQM-HIPDHPSVSAIVVL---TGEPI----- 48
M + W L C + + + F +K VVL T
Sbjct: 1 MAWLWMCLLACGVAALGSLAFLLRFAERLKHEGRSHRPQKSDVGVVLGAYTDGYEPSHPL 60
Query: 49 --RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A L I +SG + +VS+ +++ + + + + NT
Sbjct: 61 VARLRAAIALYRQGYIRAIIVSGGQGENETVSEARSMKRFLVMNGIPADAVHEERMSTNT 120
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
N +SA + +I+T DYH+PR + +
Sbjct: 121 WENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMLGMDAT 163
>gi|153004625|ref|YP_001378950.1| hypothetical protein Anae109_1763 [Anaeromyxobacter sp. Fw109-5]
gi|152028198|gb|ABS25966.1| protein of unknown function DUF218 [Anaeromyxobacter sp. Fw109-5]
Length = 252
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------------PI 48
+ L G F+ + A +VL+G+
Sbjct: 46 VLVVFSLAPVANGLQRFVERGAERTFRPGAVYDAAIVLSGQVDEAASRASGELELDAAAD 105
Query: 49 RIERAFELLENQIGEKIFISGVHHSV-----SKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ R EL ++ +SG + S+ L+ +R + I + ++ NT
Sbjct: 106 RVVRGLELWRAGRVRRLLLSGGPPAAVPGEPSEAERLRDALVRWGVPAAAILVDPQSRNT 165
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
NA ++ A ++ +L+VT H PR + + + V P+ S
Sbjct: 166 RENAIASAHLAAEHGLRSLLLVTSAAHAPRALGCFRAVGLSPDVL----PVDRRTGPSGS 221
Query: 162 SIFKIKIL 169
+ + L
Sbjct: 222 WLPRAGAL 229
>gi|22299705|ref|NP_682952.1| hypothetical protein tlr2162 [Thermosynechococcus elongatus BP-1]
gi|22295889|dbj|BAC09714.1| tlr2162 [Thermosynechococcus elongatus BP-1]
Length = 263
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 68/213 (31%), Gaps = 43/213 (20%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLE 58
++ + + + P +AIVVL G RI L
Sbjct: 55 YVAATLIASLERQYLPPHPMPKAAAIVVLGGAVVPQTAPRPWVEVTEGGDRILYGAHLFR 114
Query: 59 NQIGEKIFISGV-----------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ +SG +V + + +D I + +LNT NA
Sbjct: 115 QGSDPYLILSGGRINWLGETFQQAEAVDMAEIATTCGVPRDK----ILLETSSLNTYQNA 170
Query: 108 QEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A EK+ +L+VT YHMPR +R+ V P + + + +
Sbjct: 171 VNVKALLEKHQMQGKLLLVTSAYHMPRAVAIFRRLGMDVIPAPTDYRYPTIARSPTWQNL 230
Query: 167 -----------KILRVLLIEYLKILLLSIQLSL 188
I + L EY +L+ ++ L
Sbjct: 231 LLSLIPNPYNVDITTIALREYQGLLIYRLRGWL 263
>gi|317055190|ref|YP_004103657.1| hypothetical protein Rumal_0470 [Ruminococcus albus 7]
gi|315447459|gb|ADU21023.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 198
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 59/174 (33%), Gaps = 18/174 (10%)
Query: 33 DHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVH-HSVSKDIL-----LQK 82
D S I+VL G R+ A L I +SG S + ++K
Sbjct: 27 DGSSADLIMVL-GSRKACDYRVPEAVRLYNEGKAPLILLSGGQVQDTSLGNMAEWESMKK 85
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF----HHVLIVTHDYHMPRTFLEL 138
+ ++E I + NT N + + +++VT YHM R
Sbjct: 86 AALALGISESDILAEKLSKNTAENFMYSDELLI--GYLPLGSKIILVTTAYHMRRALCMA 143
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQT 192
+ FIP P+ + + K + L E+ K L I+ + T
Sbjct: 144 HKFMPGYDFIPCPVQKGSATKENWYKTDKGRQTALDEWRK-LSYYIKDGIFEDT 196
>gi|311032605|ref|ZP_07710695.1| hypothetical protein Bm3-1_19074 [Bacillus sp. m3-13]
Length = 207
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 16/164 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISG--VHHSVSKDI--LLQKI 83
D+ + I V R+ A +L + KI SG V LL +
Sbjct: 29 DNRNGDCIFVP--GSSKAVQYRLPPAIQLYQEGRAGKILFSGGVVWDGNQLSEAQLLAEK 86
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEAS----AWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ + I I ++L+T+ N + + +++VT YHM R L+L+
Sbjct: 87 AMELGVPSEDILIENQSLHTKENVLASLLVLDRALHLHKISRLIVVTSHYHMRRMNLKLR 146
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ + P+ E++ + + E K++
Sbjct: 147 TYMPDWIDYSLCPVNDRTTREDNWFLNPYGRQRVEAESAKLISY 190
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 91 ECCIDIGY---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
E +DI + ++ NT NA +K + HHV +VTH YHMPR+ Q+ TV
Sbjct: 41 ELNVDIAWPEGESRNTWENAHFTKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSP 100
Query: 148 IPYPIISHDLEENSSIFKIKIL------RVLLIEYLKILLLSIQ 185
+P +S + + + R+ L EYL +L S++
Sbjct: 101 MPTGQLSQQSSTSYWLNWLPSAGALHISRLALHEYLGLLFYSLK 144
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVLLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E + + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGIPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA E+ + H V+IV+ HM R
Sbjct: 130 LVEAKRLMEQRDLHRVIIVSDPLHMARAL 158
>gi|190576261|ref|YP_001974106.1| hypothetical protein Smlt4469 [Stenotrophomonas maltophilia K279a]
gi|190014183|emb|CAQ47827.1| conserved hypothetical exported protein [Stenotrophomonas
maltophilia K279a]
Length = 210
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVLLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E + + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEARYAPLLIFTGGYGGTGARFSESQVARRYALKHGVPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA ++ H V++V+ HM R
Sbjct: 130 LVEAKRLMDQRGLHRVIVVSDPLHMARAL 158
>gi|37520492|ref|NP_923869.1| hypothetical protein glr0923 [Gloeobacter violaceus PCC 7421]
gi|35211486|dbj|BAC88864.1| glr0923 [Gloeobacter violaceus PCC 7421]
Length = 239
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 21/162 (12%)
Query: 29 MHIPDHPSVSAIVVLTGEPI----RIERAFELLENQIGEKIFISGVHH-SVSKDILLQKI 83
P + AIVVL R+E A L +IFISG + L +
Sbjct: 85 PEAPSNLKADAIVVLGRGERLRHTRVELAARLWRAGRAPRIFISGRNDADTMVADLRRM- 143
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
L + + T+ NA+ + +L+VT HM R+ +
Sbjct: 144 ----GLPAKAVAGEECSRTTQENAEFTARILRPAGVRTLLLVTDAPHMLRSLRTFKEAGF 199
Query: 144 TVQFI--PYPIISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ P+P +L E +++ EYL +L
Sbjct: 200 NSAAVTSPFPEKLSELRERL---------IVVREYLGLLTYR 232
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 71/197 (36%), Gaps = 28/197 (14%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------------IRIERAFELL 57
+ G + KQ P + IVVL G R+ A L
Sbjct: 54 LAGDVLIRSLEKQYPQPLTVQGNVIVVLGGGATEGTPDINGQGNLLGSAANRLLTAARL- 112
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
G I SG S ++ + Q+ + + I I ++LNT+ NA S
Sbjct: 113 HEATGLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNAVYTSKIL 172
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH------DLEENSSIFKIKI 168
+++ ++VT +HMPR LE QR P ++ + + S I
Sbjct: 173 KQHQLTKPILVTSAFHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSPSAGAIST 232
Query: 169 LRVLLIEYLKILLLSIQ 185
L EYL IL L ++
Sbjct: 233 TGTALKEYLGILALKLK 249
>gi|258511943|ref|YP_003185377.1| hypothetical protein Aaci_1976 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478669|gb|ACV58988.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 199
Score = 78.4 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 17/153 (11%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISFIRYVKQM-HIPDHPSVSAIVVL---TGEPI----- 48
M + W L C + + + F +K VVL T
Sbjct: 1 MAWLWMCLLACGVAALGSLAFLLRFAVRLKHEGRSHRPQKSDVGVVLGAYTDGYEPSHPL 60
Query: 49 --RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ A L I +SG + +VS+ +++ + + + + NT
Sbjct: 61 VARLRAAIALYRQGYIRAIIVSGGQGENETVSEARSMKRFLVMNGIPSDAVHEERMSTNT 120
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
N +SA + +I+T DYH+PR
Sbjct: 121 WENLYHSSAIMRDRGYRTAVIITSDYHLPRALA 153
>gi|304404431|ref|ZP_07386092.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
gi|304346238|gb|EFM12071.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
Length = 230
Score = 78.0 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----------TGEPIRIERAFEL 56
+ V + + + I VK+ P I+VL G R++ AF L
Sbjct: 28 WMIVLGVLWCGYLLWLINDVKRPLPRSLPKADVIIVLGAALWSDKPSPGLKERLDYAFGL 87
Query: 57 LENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ +K+ ++G ++++ +++ + + + I KA +T N +
Sbjct: 88 YKLGKADKLILTGGLDGNGSTITEAEGMRRYLTARGIPNDKLLIENKATSTYENLLFSKQ 147
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ VLIVTHDYH R E+ R
Sbjct: 148 ITDRGGMKQVLIVTHDYHSSRA-AEIAR 174
>gi|254228155|ref|ZP_04921584.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393954|ref|YP_003285808.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
gi|151939228|gb|EDN58057.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337548|gb|ACY51343.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
Length = 205
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A +L + + K+ +SG + ++ + +++ + ++E I + A NT
Sbjct: 60 KMPTAVQLYKEKKVSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 119
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
NAQ ++ ++ V I+T +H+ R + + ++ Y + ++
Sbjct: 120 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDNW 179
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ + RV+ E +K L +
Sbjct: 180 WLTESAVSRVMHSHEVIKSLGVK 202
>gi|254228166|ref|ZP_04921595.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393992|ref|YP_003285846.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
gi|151939239|gb|EDN58068.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337586|gb|ACY51381.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
Length = 209
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEG 105
++ A +L + + K+ +SG + ++ + +++ + ++E I + A NT
Sbjct: 64 KMPTAVQLYKEKKVSKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 123
Query: 106 NAQEASAWAEKNNF--HHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
NAQ ++ ++ V I+T +H+ R + + ++ Y + ++
Sbjct: 124 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKNVLPQSLDLYGYFVNDRSTRRDNW 183
Query: 163 I-FKIKILRVL-LIEYLKILLLS 183
+ + RV+ E +K L +
Sbjct: 184 WLTESAVSRVMHSHEVIKSLGVK 206
>gi|332968539|gb|EGK07600.1| protein of hypothetical function DUF218 [Kingella kingae ATCC
23330]
Length = 207
Score = 78.0 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAF 54
GL + LI + + + Y P A VVL G RI A
Sbjct: 15 LGLSIALISSLQLWCVWQVYAYSRPQPLPDEADAAVVL-GAAAWGNKPSPVFRERINHAL 73
Query: 55 ELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L + +KI +G ++ + ++ I+Q +A+ I ++ +T N
Sbjct: 74 TLYQTGRVKKIIFTGGTPKAGFATEAEVARQYAIKQGIADQDIVFETRSKDTFQNLANTR 133
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
+K++ + V+IV+ YHM R
Sbjct: 134 FLMKKHHLNSVIIVSDPYHMARAMN 158
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 77.6 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ + W LFV L+ +++G ++I +V + AI+VL RI
Sbjct: 13 LGWLWR-LFVVLVIWLLGVTAWIVWVGERDQAA--KADAIIVLGAAAYDAKPSPVFEERI 69
Query: 51 ERAFELLENQIGEKIFISGVHHSV----SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+L E Q + +G + S+ + ++ ++ + + I I + NT N
Sbjct: 70 RHGLDLYEAQYAPLLIFTGGYGGSGARFSESQVARRYALKHGVPDDAILIETASRNTVQN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
EA ++ N H V+IV+ HM R
Sbjct: 130 LIEAKRLMDQRNLHRVIIVSDPLHMARAL 158
>gi|110597117|ref|ZP_01385406.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110341308|gb|EAT59773.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 599
Score = 77.6 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 15/198 (7%)
Query: 4 FWYGLFVCLIFFIMGFISFI-RYVKQMHIPDHPSVSAIVVLTGEPI----------RIER 52
L + L+ F FI + H P AIVV +G R
Sbjct: 401 LTVLLMLYLVIFHSPLFWFIGDQLVVRHAPL--KTDAIVVFSGNGESAYRNDSYQRRALD 458
Query: 53 AFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCI-DIGYKALNTEGNAQEA 110
A IF+S G +S+ +++ + +A I + +T N +
Sbjct: 459 AVRFYRQGYAPHIFLSSGKEQDLSEVDVIKLYLEDKGVAASAIHILDKYPKSTSENVEMV 518
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR 170
+ H +L +T YH R ++ + + ++ + + +
Sbjct: 519 MQQLRRQGVHSILFLTSPYHGRRALWTWRKQAPDITVLTPAVVDTPPADPQWGATVDQIS 578
Query: 171 VLLIEYLKILLLSIQLSL 188
V++ EY+ I+ Q L
Sbjct: 579 VIVYEYVAIVYNWFQGRL 596
>gi|309775431|ref|ZP_07670434.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916820|gb|EFP62557.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 193
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPI------------RIERAFE 55
+ ++F I + Y + P V A +VL G P R++ A
Sbjct: 6 AILIVFLIAANLILYHYFPKPKKPKAGRVYDAAIVL-GSPAKEDGSLSRLQKTRMDAAIR 64
Query: 56 LLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
L ++I ISG V + ++ ++ I +A+ + + KA NT N + A
Sbjct: 65 LYRQHTVQRIIISGGSVRNDYAEAEIMAAYAITCGIAKEVLLLERKARNTYENLKYAKEI 124
Query: 114 AEKNNFHHVLIVTHDYHMPRT 134
+ +H V++VT +H+ R
Sbjct: 125 CIAHEWHSVVVVTSSFHVRRA 145
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 21 SFIRYVKQMHI-PDHPSVSAIVVLTGEP------------------IRIERAFELLENQI 61
F+ +++ + P+HP I++L G R+ A L
Sbjct: 66 LFMGSLERTYPVPEHPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRL-HRLY 124
Query: 62 GEKIFISG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
G I +SG V ++ + +++ I + E I ++L T NA+ ++ +
Sbjct: 125 GLPILLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTGQNARYSAEILHREG 184
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
F H ++VT +H+PR L +++ ++ PYP
Sbjct: 185 FMHPILVTSAFHLPRAVLNFEKL--GIEVTPYP 215
>gi|332715738|ref|YP_004443204.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
gi|325062423|gb|ADY66113.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
Length = 232
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 9/185 (4%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEK 64
GL + + G + IVVL G P R +A +L
Sbjct: 42 LGLMMLTAIGLYGLALVSAGSLLVVEDPPAQADVIVVLGGDGPPRAAQAAKLWHEGRAPL 101
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ ++G ++ + +R + + +L+T NA A ++
Sbjct: 102 VLVTGYGDC----DFIRDMLVRLGVDSAVVSTECLSLSTWENATFAQPILTGMGAKSAIL 157
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP-IISHDLEENSSIFKIKILRVLLIEYLKILLLS 183
VT +H R + + +++I P + L + + EY K LL
Sbjct: 158 VTSWFHSRRAVKRFRFVMPQIEWISLPAQRTVSLWRLAIDGDGVQV---FKEYAKALLYD 214
Query: 184 IQLSL 188
I+ S
Sbjct: 215 IRSSF 219
>gi|297567344|ref|YP_003686316.1| hypothetical protein Mesil_2970 [Meiothermus silvanus DSM 9946]
gi|296851793|gb|ADH64808.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 211
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 21/200 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISF---------IRYVKQMHIPDHPSVSAIVVLTGEPIRIE 51
+R GL + + + + + + +AIV L G R+
Sbjct: 8 LRIPLVGLALVAVLGLAHGLWLPGIAAWLVVTEPLTSLEGLRSDPQAAIVPLAGGRERVL 67
Query: 52 RAFELLENQIGEKIFIS-------GVHHSVSKDILLQKIPIRQDLAECCIDI-GYKALNT 103
A L G + G+ L+ + + Q + + + T
Sbjct: 68 YAAALFRQGYGRWFLATDMPLDAPGI--RERYAELVAREAVWQGVPRSAVVLSDLTVRTT 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
A+E A + +L+VT YH R L + S + +
Sbjct: 126 YEEAREILKVAHFRGWRSLLVVTSPYHTRRARWVLSEVFGTSGIAVHVVAAPEEGYTPQN 185
Query: 162 SIFKIKILRVLLIEYLKILL 181
+ LR EYLK++L
Sbjct: 186 WWQSVDGLRNTWTEYLKLVL 205
>gi|145219718|ref|YP_001130427.1| hypothetical protein Cvib_0911 [Prosthecochloris vibrioformis DSM
265]
gi|145205882|gb|ABP36925.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 196
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 7/185 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
L V +GF+ + Y+ H I+VL G+ R++ L + G +
Sbjct: 10 RFLLVLSAIGALGFLG-LGYIVSFHAAPPVQSDVIIVLGGDSGRRVKHGAALYKEGYGAR 68
Query: 65 IFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ ++G+ + ++ + + + ++ T A +SA ++ +
Sbjct: 69 VVLTGIDRRFYRKGHLNWRERRMKALGVPLNAVLVDTRSETTWDEAVNSSALMKQRGWRT 128
Query: 122 VLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
L+V+ HM R E + F+ + R ++ E K
Sbjct: 129 ALVVSDPPHMLRLKKTWEAAFEGTDQTFVLTATKPGWWDPLLWWRNPISYRFVISEVKKN 188
Query: 180 LLLSI 184
L ++
Sbjct: 189 LFYAV 193
>gi|311747747|ref|ZP_07721532.1| membrane protein [Algoriphagus sp. PR1]
gi|126575735|gb|EAZ80045.1| membrane protein [Algoriphagus sp. PR1]
Length = 256
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 32/175 (18%)
Query: 41 VVLTG----------------EPIRIERAFELLENQIGEKIFISG------VHHSVSKDI 78
+VLTG RI A +L +KI I+G V+ S+
Sbjct: 79 IVLTGVTNLSKTAYDRTFFNKGADRITHALQLYRMGKIKKILITGGQGLNPVNPQ-SEAE 137
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPRTF 135
LLQ+ I + + I KA NT NAQ + E+ L++T +HM R+
Sbjct: 138 LLQRFLIMTGVPPEDVMIEDKAKNTAQNAQFTKTFLEEKGINIDQEFLLITSAFHMYRSK 197
Query: 136 LELQRINSTVQFIPYPIISHDLEEN------SSIFKIKILRVLLIEYLKILLLSI 184
++ + P S+D + + S I+ L+ E++ I + +
Sbjct: 198 GCFDKVGLKTETFPTDYYSYDTKYDFPTFMYPSPSSIENWHKLVKEWIGITVYKL 252
>gi|332969923|gb|EGK08925.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 189
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+++A +L + + + +SG + + ++++ + + + + + + ++ NT
Sbjct: 59 QERMDQALKLYQRGLAPILILSGGSPRGTTPEARVMKEYLVERGVRKRDLILEDRSTNTA 118
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
N + + V +VTHD+HM R +R + P P+ + L
Sbjct: 119 ENLVRSGELLLSHGIRDVYLVTHDFHMYRALRCARRA--QLSVTPAPVATRSLW 170
>gi|148558293|ref|YP_001257412.1| Bme2 protein [Brucella ovis ATCC 25840]
gi|148369578|gb|ABQ62450.1| Bme2 protein [Brucella ovis ATCC 25840]
Length = 205
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ +++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGIPPVIKHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 68/185 (36%), Gaps = 10/185 (5%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQI--GEKIFI 67
+G +++ Q P I+V G R E+A +LL+ EK +
Sbjct: 11 AFAALAIGLRYIYKHLDQGQAPQVS--DLIIVAEGPAVERAEKAVQLLKAAYSRAEKNIV 68
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + V + L E I+ +A +T NA + + +H ++VT
Sbjct: 69 SPRYTDVG-EDLFAGYQQLGAERENLIE-ENQATSTWTNATTSLDLMDDLGYHSAIVVTS 126
Query: 128 DYHMPRTFLELQRINSTVQF-IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQL 186
DYHM RT L QR N F + Y +S + ++ L E K + + L
Sbjct: 127 DYHMRRTRLAFQRANRDYGFQLTY--VSAYYQGQPYPKHPYTQKMALQELYKYIGYCLHL 184
Query: 187 SLSTQ 191
Sbjct: 185 YHWID 189
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 45/206 (21%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIF 66
+ + + P +AIVVL G RI L + +
Sbjct: 63 SLEWQNIPNGELPKATAIVVLGGGTKAPTPPRPWVDVGEAGDRILYGALLYKQDKAPWLI 122
Query: 67 ISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+SG S D +++I + + E I +LNT NA +NN
Sbjct: 123 LSGGRIQWDGKEPPESAD--MKEIAVEMGVRESAILQDPDSLNTYQNAVNVRQILAENNL 180
Query: 120 H-HVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKILRVL-- 172
VL+VT HMPR+ L QR ++ IP P + DL+ +++I + +IL ++
Sbjct: 181 TGKVLLVTSALHMPRSLLVFQR--QGIEVIPAPTDFLVSQQDLQPSTTI-QGRILNLIPD 237
Query: 173 ----------LIEYLKILLLSIQLSL 188
L EY+ +++ ++ L
Sbjct: 238 TQSLQQFTQALKEYIGMIVYRLRGWL 263
>gi|94266695|ref|ZP_01290369.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
gi|93452658|gb|EAT03218.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
Length = 254
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 31/211 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-------------- 46
+ + W+ + + +S + P+ IV+L G
Sbjct: 46 VAWLWFWSLPVVADALR--LSLEGRFAPQRAEELPAADFIVLLGGGVRGVPADWPYPDLN 103
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHS-----VSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L I +SG S+ ++++ + + + I + +
Sbjct: 104 AAADRVWHAPRLYHADKAPLIIVSGGGKEWHGERGSEAEAMRELLLAFGVPDGAIRLEDR 163
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY-----PIIS 154
+ +T NA + + VL+VT HMPR+ + + P P
Sbjct: 164 SRSTRENALYTAPLVGE---RPVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPL 220
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
H L + L EYL +L+ ++
Sbjct: 221 HSLRLLPDAHSLHQSTSALKEYLGLLVYRLR 251
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 26/182 (14%)
Query: 15 FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELL 57
MG + + A++VL G R+ R FELL
Sbjct: 56 VAMGLMRAAEAGAVRSFQPGATYDAVIVLGGALDPAATERTGVPEYNAAAERVLRGFELL 115
Query: 58 ENQIGEKIFISGV--HHS----VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
++ +SG V D+LL+++ E + G + NT NA E++
Sbjct: 116 HEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGR-SRNTRENAVESA 174
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD--LEENSSIFKIKIL 169
++ + +L+VT HMPR + +P + + L S + + L
Sbjct: 175 RIIQERGWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGAL 234
Query: 170 RV 171
+
Sbjct: 235 NL 236
>gi|254282506|ref|ZP_04957474.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678709|gb|EED35058.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 253
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 30/213 (14%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-------IRYVKQMHIPDHPSVSAIVVLTGE-------- 46
+ W L L++F + P IVVL G
Sbjct: 37 AFLWSFLAFALVYFCSTEFGANTLMEPLEARYPAFAPEELPKAEVIVVLGGAIDGESRFG 96
Query: 47 --------PIRIERAFELLENQIGEKIFISGVHHSVSK--DILLQKIPIRQDLAECCIDI 96
R+ A EL ++ + +SG S + L+ + + + +
Sbjct: 97 RGGDATHAADRLLTAAELYARKMAPYMLLSGGAPSGQRPEADLMAEKLEFMGVPRSAMLL 156
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIIS 154
+ T NA ++ N+ H+L+VT HM R + V + + I
Sbjct: 157 EPASRTTFDNAVNSADMLNARNYRHILLVTSGAHMRRAVALFEAFGLQVTAVATDHQIPR 216
Query: 155 HDLEENSSIFKIKILR---VLLIEYLKILLLSI 184
+ + L + E++ + +
Sbjct: 217 YAPTVPGWLPTADRLARSTRAVHEWVGYWVYDL 249
>gi|161620495|ref|YP_001594381.1| hypothetical protein BCAN_B0429 [Brucella canis ATCC 23365]
gi|163844593|ref|YP_001622248.1| hypothetical protein BSUIS_B0427 [Brucella suis ATCC 23445]
gi|225686235|ref|YP_002734207.1| hypothetical protein BMEA_B0404 [Brucella melitensis ATCC 23457]
gi|254699682|ref|ZP_05161510.1| hypothetical protein Bsuib55_02296 [Brucella suis bv. 5 str. 513]
gi|254702819|ref|ZP_05164647.1| hypothetical protein Bsuib36_02539 [Brucella suis bv. 3 str. 686]
gi|256015209|ref|YP_003105218.1| Bme2 protein [Brucella microti CCM 4915]
gi|256043322|ref|ZP_05446257.1| hypothetical protein Bmelb1R_02479 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111677|ref|ZP_05452661.1| hypothetical protein Bmelb3E_03418 [Brucella melitensis bv. 3 str.
Ether]
gi|256262633|ref|ZP_05465165.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|260564530|ref|ZP_05835015.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260568269|ref|ZP_05838738.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261750147|ref|ZP_05993856.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753420|ref|ZP_05997129.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265989745|ref|ZP_06102302.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993148|ref|ZP_06105705.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|294853761|ref|ZP_06794433.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297250207|ref|ZP_06933894.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|5478233|gb|AAD43833.1|AF076290_2 Bme2 [Brucella melitensis]
gi|161337306|gb|ABX63610.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|163675316|gb|ABY39426.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642340|gb|ACO02253.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|255997869|gb|ACU49556.1| Bme2 protein [Brucella microti CCM 4915]
gi|260152173|gb|EEW87266.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260154934|gb|EEW90015.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261739900|gb|EEY27826.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743173|gb|EEY31099.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764018|gb|EEZ10050.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|263000414|gb|EEZ13104.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092418|gb|EEZ16671.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|294819416|gb|EFG36416.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297172960|gb|EFH32338.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|326410585|gb|ADZ67649.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326553876|gb|ADZ88515.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 205
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|291614927|ref|YP_003525084.1| hypothetical protein Slit_2472 [Sideroxydans lithotrophicus ES-1]
gi|291585039|gb|ADE12697.1| protein of unknown function DUF218 [Sideroxydans lithotrophicus
ES-1]
Length = 251
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 31/207 (14%)
Query: 9 FVCLIFFIMGFISFIRYVKQ-------MHIPDHPSVSAIVVLTGEPI------------- 48
+ +++ F + Q ++ P AIVVL G
Sbjct: 45 VSVALLWLLSTPFFAEAMLQGLEGQPFVNDTSKPQADAIVVLGGGTNFRAPEYGGDTVSK 104
Query: 49 ----RIERAFELLENQIGEKIFISGVHH-SVSKDILLQKIPIRQDLAECCID-IGYKALN 102
R+ A L G+ I ++G Q + + + N
Sbjct: 105 ETLERLRYAARLYRQ-TGKPILVTGGTPLGNDLSEAAQMKKTLEQEFNVPVRWAEGASNN 163
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS----HDLE 158
T NA+ + +K + +VTH +HMPR Q V P + L
Sbjct: 164 TLENARLSREVLKKEGISRIYLVTHAWHMPRAVQVFQAAGFQVYPAPTAYTTRYQLDLLV 223
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQ 185
S ++ R+ + E + +L ++
Sbjct: 224 FIPSASALRDSRIFMHEMIGLLWYRLK 250
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 35/219 (15%)
Query: 3 YFWYGLFVCLIF----FIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG------------ 45
WY V F G + F+ + + +P AIVVL G
Sbjct: 33 LLWYAALVLWAFSIPTVADGLMHFVEGNRTVALPQTLHQADAIVVLGGMIRRVEGAAEGE 92
Query: 46 ---EPIRIERAFELLENQIGEKIFIS-GVHH----SVSKDILLQKIPIRQDLAECCIDIG 97
R E L + + G +V + LL + +++ + E + +
Sbjct: 93 WNDAADRFEAGVTLYRAGKAPLLLFTRGRMPWSPDAVPEGELLVERALQRGVPEAALGLT 152
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII---- 153
NTE A + + + +++VT YHM R+ L + +V+ PYP+
Sbjct: 153 APVANTEDEAADVARLLRERGAERIILVTSAYHMRRSQLLFEHTGLSVE--PYPVDFRVD 210
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
L S + L E + L ++L
Sbjct: 211 SYPEPAVLRFAPSAEALYRSETALRELIGWLYYRVKLFF 249
>gi|306845690|ref|ZP_07478259.1| Bme2 protein [Brucella sp. BO1]
gi|306274011|gb|EFM55838.1| Bme2 protein [Brucella sp. BO1]
Length = 205
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILLGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G ++ + +P L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMIAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ S ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFASSPVADADMPGGLS-GTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|23500175|ref|NP_699615.1| Bme2 protein [Brucella suis 1330]
gi|23463775|gb|AAN33620.1| Bme2 protein [Brucella suis 1330]
Length = 205
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 76.1 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 35/195 (17%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFI 67
RY I D+P V AIVV+ G R+ A L I +
Sbjct: 6 RYHPSQDITDYPMVQAIVVIGGCLESAKPPRRTFNVGDAGDRVIHAARLYHAGKAPLILV 65
Query: 68 SG-------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG V ++ + + ++ T NA + + H
Sbjct: 66 SGGTLPWRKVPPE---ADAMRAFLEELGVPTKAVMSEPDSITTYENALFSKKLLDNKGIH 122
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-------IKILRVLL 173
+L+VT +HM R+ +++ + IP P ++ S+F + + +
Sbjct: 123 KILLVTSAFHMRRSAAVFRKV--GFEVIPAPTDFRVVKNPPSLFDYLPDVRYLHQTTIAI 180
Query: 174 IEYLKILLLSIQLSL 188
EY+ + +++ L
Sbjct: 181 KEYIGLEYYALKQRL 195
>gi|83814701|ref|YP_445779.1| hypothetical protein SRU_1660 [Salinibacter ruber DSM 13855]
gi|83756095|gb|ABC44208.1| Uncharacterized ACR, COG1434 family [Salinibacter ruber DSM 13855]
Length = 281
Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 68/230 (29%), Gaps = 38/230 (16%)
Query: 2 RYFWYGLFV--CLIFFIMGFI----SFIRYVKQMHIPDH----PSVSAIVVLTGE----- 46
R L V L+ ++ ++ H P PS A VVL G
Sbjct: 34 RRSGMALLVGGVLVLWVASAPLVSDWLRGRLEGQHPPTRVDSLPSAEAAVVLGGGVSPPR 93
Query: 47 -----------PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--- 92
R+ A L + SG + ++ P L +
Sbjct: 94 PPRIHPDLNDAADRVWHAARLYHAGKVPLVIASGGTQPWKRPD-AREAPATNVLLQDWGV 152
Query: 93 ---CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I + K+ NT NA + ++ + VL+VT HMPR + P
Sbjct: 153 PGDAILLESKSANTYENATRTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAP 212
Query: 150 YPIISHD-----LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
+ D L+ + + EY+ L+ + + S
Sbjct: 213 TDVQVGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYDWRGWIDGPAGS 262
>gi|56965774|ref|YP_177508.1| hypothetical protein ABC4016 [Bacillus clausii KSM-K16]
gi|56912020|dbj|BAD66547.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 201
Score = 75.7 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISGV----HHSVSKDILLQKI 83
D S I V R+ +A +L + K+ SG + +L++
Sbjct: 27 DGKSGDCIFVP--GSSKAVEYRVPKAVDLYKQGRARKLLFSGGVSWDETKTPEAVLMKAK 84
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEAS----AWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
+ +A I + ++L+T+ N + + + +L+VT YHMPR +L ++
Sbjct: 85 ALSLGIAAKDILVEDRSLHTKENVLASLLVLDRAIDLHRIKRLLLVTASYHMPRVYLMMR 144
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ +++ P+ + + + E K++
Sbjct: 145 TYMPSWIEYSLCPVDDKTTTAENWHLSPFGRKRVETEARKLISY 188
>gi|163852963|ref|YP_001641006.1| hypothetical protein Mext_3555 [Methylobacterium extorquens PA1]
gi|163664568|gb|ABY31935.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 275
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 36/216 (16%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSVSAIVVLTGE------------- 46
W G+ + ++Q D V I+VL+G
Sbjct: 29 LAWAGVLATFSGLTPLANWALLPLEQRFPAQVDDVRPVDGIIVLSGGIDLTTSRTRGRLE 88
Query: 47 ----PIRIERAFELLENQIGEKIFISGVHH-------SVSKDILLQKIPIRQDLAECCID 95
RI +L ++ +G ++ +L +A I
Sbjct: 89 LNDAGDRITALIDLAHRYPQARLVYTGGDPYPTGGRARPTEAVLAAAYLEGIGIAPARIT 148
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI--- 152
+ ++ T NA E E + L++T +HMPR +R+ ++ PYP+
Sbjct: 149 VEARSRTTAENASEVRKLLEPHPGERWLLITSAWHMPRAMGAFRRV--GLELEPYPVDFR 206
Query: 153 ----ISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ + + +L V E+ +++ +
Sbjct: 207 TAGPFATRFTFRHAADGLHLLDVAAKEWAGLVVYRL 242
>gi|156741328|ref|YP_001431457.1| hypothetical protein Rcas_1343 [Roseiflexus castenholzii DSM 13941]
gi|156232656|gb|ABU57439.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 213
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 8/157 (5%)
Query: 36 SVSAIVVLTGE---PIRIERAFELLENQIGEKIFISGVHH-----SVSKDILLQKIPIRQ 87
+ AI+VL GE P R A L + +G S + +++ + +
Sbjct: 50 TADAIIVLGGEAYPPNRTIHALALYHQHRAPVVVFTGGAPPGRPPETSSAQVARRLALAR 109
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L + A +T A + + ++IVT YH R + +
Sbjct: 110 GLPPDVALLADGAQSTYDEAVLVRELVAAHGWRSLMIVTDPYHTRRAVRTFRTLIPNAHV 169
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ +I R E +K+ +
Sbjct: 170 TASAAPFLSPCADPWRCGARIWRYAASELVKMGFYRL 206
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLT----GEP------IRIE 51
R+ + + F + I + + AI+VL G+ R+E
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIISFGFTEKPKKSDAIIVLGCAVYGDAPSPFFKERLE 62
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A +L + G I ISG S+S+ ++ + + +A I + K+ +T N
Sbjct: 63 EALKLYKEGYGRYIIISGGKGPGESISEAEAGKRYFLEKGVASKNILLDNKSFSTYENLL 122
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ EKN+ +IV++ +H+ R + +RI F
Sbjct: 123 FSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|167465736|ref|ZP_02330825.1| hypothetical protein Plarl_24758 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381937|ref|ZP_08055887.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154077|gb|EFX46405.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 233
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 29/192 (15%)
Query: 9 FVCLIFFIMGFIS-FIRYV---KQMHIPDHPSVSAIVVL-----T-----GEPIRIERAF 54
V L + G + F +Q + V +VL T G R+++A
Sbjct: 4 AVFLGILLAGLLWTFYVQWLLSRQDYPALPEGVDTGIVLGAKLETNQASPGLAERLDQAI 63
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
L + + + +SG +++ ++ +++ + E I + +A NT N
Sbjct: 64 SLYNQRKFKHLIVSGGLDKEGDSQITEAEGMRNYLVQKGIPEQAITMEKQAKNTYENLVF 123
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTF----------LELQRINSTVQFIPYPIISHDLEE 159
+ E+ + +I+TH+YH R L +ST F+PY I L
Sbjct: 124 SKRIMEQKGWTSCIIITHEYHGARAMDIADFIALSPAYLSTTDSTHLFMPYHKIREILAF 183
Query: 160 NSSIFKIKILRV 171
F +R+
Sbjct: 184 TKWEFNKWRMRL 195
>gi|148241215|ref|YP_001226372.1| hypothetical protein SynRCC307_0116 [Synechococcus sp. RCC307]
gi|147849525|emb|CAK27019.1| Uncharacterised conserved membrane protein [Synechococcus sp.
RCC307]
Length = 265
Score = 75.7 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 39/200 (19%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P A++VL G R+ L +
Sbjct: 64 DQAASLTPKSLPEADAVLVLGGGIRPAPAKGQGVEVNEAGDRLLCGVRLWRQGKAPVLIT 123
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + +L Q++ + + + KA T AQ + A + +
Sbjct: 124 SGARVSFTLNDPIAPEAVLSQQLAQELGVPASALLLNEKARTTAEEAQRINQLAAEQGWK 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIP----YPIISHDLEENSSIFK----------- 165
+++VT +HMPR +R S +Q IP Y + + S +
Sbjct: 184 QLILVTSAFHMPRALASFKR-QSELQIIPVACDYQLDPQHQNQAFSWGELLIDLIPSSDA 242
Query: 166 IKILRVLLIEYLKILLLSIQ 185
+ +L E+L +L+ ++
Sbjct: 243 LDQTTQVLKEHLGLLVYQLR 262
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 75.3 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 24/187 (12%)
Query: 24 RYVKQMHIPDHPSV-SAIVVLTGEPIRIER----------------AFELLENQIGEKIF 66
++ M P P+ +AIVVL G R EL +
Sbjct: 64 GKLENMVAPSLPADKAAIVVLGGGQRRTSDPDKAEVSPHTLMRLFGGIELALKFNWPILL 123
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
G + + + +++ + I ++ T N + AS+ H ++VT
Sbjct: 124 CGGSYSQEVPEAMTMAKKVKELFPDLPIYEESQSRTTWENIKNASSILRSLELKHAVLVT 183
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPI-------ISHDLEENSSIFKIKILRVLLIEYLKI 179
H YHMPR L Q + + + P+P+ ++ + I + L E++ I
Sbjct: 184 HGYHMPRAHLIAQGLAPEINWHPFPVGKMADNAPLSIIDFLPGASSLHINSLALKEHVGI 243
Query: 180 LLLSIQL 186
+ I+L
Sbjct: 244 IAYRIKL 250
>gi|149925438|ref|ZP_01913702.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
gi|149825555|gb|EDM84763.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
Length = 274
Score = 75.3 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 36/200 (18%)
Query: 26 VKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFIS 68
V + + P V AIVVL G R+ + L + + +I +S
Sbjct: 80 VLEANRPLPAQVDAIVVLGGGLEGRFDGVRALPDLNDAGDRVWQGARLYKQGVATRIVLS 139
Query: 69 GVHHSVSKDI-----LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G ++ + + E + I + T NA + +
Sbjct: 140 GGQFQTDPRKEAEAPGMKMFMLDMGVPEDALVIEDNSRTTFENAVRTRELLGERA-RSIA 198
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN------SSIFKIKIL---RVLLI 174
+VT +HM R+ L ++ F YP+ + N + K + L V +
Sbjct: 199 LVTSAFHMGRSVLWFEKAG----FTVYPVRTDIRVLNESRAFWEWLPKPQALDESTVAIK 254
Query: 175 EYLKILLLSIQLSLSTQTAS 194
EYL L L + + T +
Sbjct: 255 EYLGRLQLKVSGAYETGGSQ 274
>gi|322382281|ref|ZP_08056191.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153783|gb|EFX46154.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 195
Score = 75.3 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 33 DHPSVSAIVVLTGEPI---RIERAFELLENQIGEKIFISGVHHSVSKDIL----LQKIPI 85
D I V + R+ +A EL + KI SG + ++ + +++ I
Sbjct: 22 DGRQGDCIFVFGSQRSLAYRVPKAIELYKQGRAGKILFSGGNQWEGQEDVEALVMKQGAI 81
Query: 86 RQDLAECCIDIGYKALNTEGNAQ----EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + E I ++ +T N E + +LIVT +HM R +L ++
Sbjct: 82 NEGIPETDIITEIRSTSTRENVLSSLLELDRAMGLHRLKRILIVTTAFHMRRCYLNMRTY 141
Query: 142 NST-VQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+++ P+ E++ ++ + E
Sbjct: 142 MPEWIEYSLCPVDDRKTREDNWFLHETGIQRVTDE 176
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-------TGEP---IRIE 51
R+ + + F + I + V AI+VL T P R+E
Sbjct: 3 RFLKLVVVLIFALFSIIAILAYQIVSFGFTEKPKKSDAIIVLGCAVYGDTPSPFFKERLE 62
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
A +L + G I ISG S+S+ ++ + + +A I + K+ +T N
Sbjct: 63 EALKLYKEGYGHYIIISGGKGPGESISEAEAGKRYLLEKGVASKNILLDNKSFSTYENLL 122
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
+ EKN+ +IV++ +H+ R + +RI F
Sbjct: 123 FSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
>gi|45656706|ref|YP_000792.1| hypothetical protein LIC10815 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828296|ref|NP_713526.2| hypothetical protein LA_3345 [Leptospira interrogans serovar Lai
str. 56601]
gi|45599942|gb|AAS69429.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293386147|gb|AAN50544.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 258
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 23/148 (15%)
Query: 25 YVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAFELLENQIGEKIFIS 68
Y + + P I+VL G R+ L + KI S
Sbjct: 70 YYPPVSLEQLPKADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRAKKAPKILFS 129
Query: 69 GV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + +V + + + + + + + K+ NT N A +++ ++ V+
Sbjct: 130 GGSGNLFYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTAENKSFAVGLLKEHGWNSVI 189
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYP 151
+VT +HM R+ Q + + IP+P
Sbjct: 190 LVTSSFHMKRSVEIFQE--NGITIIPFP 215
>gi|251796623|ref|YP_003011354.1| hypothetical protein Pjdr2_2614 [Paenibacillus sp. JDR-2]
gi|247544249|gb|ACT01268.1| protein of unknown function DUF218 [Paenibacillus sp. JDR-2]
Length = 219
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 25/192 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIE 51
+ GL + + + I + A +VL G R++
Sbjct: 21 RLFVGLCLLGVLCCGYLLWLINSYDDSKPIE--QADAAIVL-GASLWSDKPSPALKERLD 77
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +SG +++ ++ + + + + + A +T N
Sbjct: 78 FADKLYKDGKVNMFILSGGLDRNGSKLTEAQGMKAYLLAKGIPADKMLLDNAARSTYENL 137
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ A ++ + +L+VTHDYH PR E+ R S L S FK +
Sbjct: 138 LNSKVIAAEHGLNKLLVVTHDYHAPRAM-EMARYLDYENVTAAAFHSEVL----SPFKNQ 192
Query: 168 ILRVLLIEYLKI 179
VL Y K
Sbjct: 193 SREVLA--YAKW 202
>gi|254711639|ref|ZP_05173450.1| hypothetical protein BpinB_15584 [Brucella pinnipedialis B2/94]
gi|261319263|ref|ZP_05958460.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298486|gb|EEY01983.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 205
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC +A +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RAGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPMADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|310642426|ref|YP_003947184.1| protein [Paenibacillus polymyxa SC2]
gi|309247376|gb|ADO56943.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 231
Score = 74.9 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 33/197 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV-----SAIVVLT---------GEPIRIE 51
+ +IF ++GF+ V M+ + IV+ G R+E
Sbjct: 33 RFILGLMIFILVGFVWAGIRVWNMNTAASTNPLQHAQIGIVLGASMWGAEPSPGLKERLE 92
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L N +++ +SG ++ +Q+ + + + I + +A +T N
Sbjct: 93 EALWLYRNGTVQRLIVSGGLDQPDFPYTEAEGMQRYLVDRGVPVQHILLENQATSTYENL 152
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIPYPIIS---------- 154
+ ++ +++ +I+TH YH PR L + + +++
Sbjct: 153 LYSQRIMKEYDWNSTVIITHSYHGPRAMEIAQFLNFDHPQMALTESKVLNMPIHQSREVL 212
Query: 155 --HDLEENSSIFKIKIL 169
+
Sbjct: 213 AYAKWTLQRWWISAQTW 229
>gi|256059361|ref|ZP_05449563.1| hypothetical protein Bneo5_03263 [Brucella neotomae 5K33]
gi|261323321|ref|ZP_05962518.1| Bme2 [Brucella neotomae 5K33]
gi|261299301|gb|EEY02798.1| Bme2 [Brucella neotomae 5K33]
Length = 205
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGCSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|186681117|ref|YP_001864313.1| hypothetical protein Npun_F0616 [Nostoc punctiforme PCC 73102]
gi|186463569|gb|ACC79370.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 263
Score = 74.5 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 74/219 (33%), Gaps = 39/219 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRI 50
L C +I + + + + P AIVVL G R+
Sbjct: 47 LLLFCSNAWIAKSLVRSLEWQNLPLAQIPVAEAIVVLGGATKSAFPPRPTVDLSESGDRV 106
Query: 51 ERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
A +L + I +SG + + I + I ++LNT
Sbjct: 107 IYAAQLYRQKRAPIIILSGGRIDWRGGGSPESADMATILTSIGIPSEAIVQEPESLNTYQ 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENS 161
NA E + VL+VT HMPR+ QR + IP P + +L+E
Sbjct: 167 NAVNVRKILESRGINQVLLVTSAMHMPRSLNIFQR--QGINVIPAPTDFLVSQGELQELG 224
Query: 162 SIFKIKILRVL------------LIEYLKILLLSIQLSL 188
K IL +L L EY+ L+ ++ L
Sbjct: 225 GTPKAAILNLLPDTDNLHQFTSALKEYIGSLIYRLRGWL 263
>gi|115380347|ref|ZP_01467350.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115362646|gb|EAU61878.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 233
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 26/184 (14%)
Query: 6 YGLFVCLIF----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--------------- 46
GL V F G + ++ + A++VL G
Sbjct: 19 LGLAVLYTFSIEPVAGGLMRWVESGAKETYRPEVVYDAVIVLGGGLDPDATERSGRPEYN 78
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC-----CIDIGYK 99
RI R +ELL + +SG + +++ +++ L I +
Sbjct: 79 AAVERILRGYELLREGRARHVLLSGGSLDTRPEAVIEATVLQRQLLAWGIAPERIVVEGH 138
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA ++ E+ + +L++T H+PR + + + + + D +
Sbjct: 139 SRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLAADVRASDGKR 198
Query: 160 NSSI 163
S
Sbjct: 199 PPSW 202
>gi|254430947|ref|ZP_05044650.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625400|gb|EDY37959.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 265
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 41/201 (20%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P+ A+VVL G R+ LL +
Sbjct: 64 ERSTALEPASLPAADAVVVLGGGLRPAQPPRRGVEVGEAGDRLLTGVRLLRQGKAPTLVT 123
Query: 68 SG--VHHSVSK-----DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG VH + K + + + +A I + +A T A++ A +
Sbjct: 124 SGGRVHFTAGKPPPPEAEWARDLAVELGIAPERILLAREARTTAEEARDLGAMGRTRGWS 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK------------- 167
VL+VT HMPR QR + ++ + P L + +S
Sbjct: 184 RVLLVTSASHMPRALATFQRRS-GLEVVAVPTDFQ-LPQRASYGAPTLGSALLSVAPDAE 241
Query: 168 ---ILRVLLIEYLKILLLSIQ 185
+ V+L E+L +L+ ++
Sbjct: 242 ALYLSTVMLKEHLGLLVYRLR 262
>gi|78357887|ref|YP_389336.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220292|gb|ABB39641.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 280
Score = 74.5 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 27/194 (13%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
+ +C++ G + + P +VVL G R A +L ++
Sbjct: 84 AILLCVLG-AGGLLWIAGNATTEYPP--RKADVMVVLGGGLHRAMFAADLYNRGYAPVVY 140
Query: 67 IS--------GV-----HHSVSKDILLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASA 112
+S GV + + + +I + + I + GY ++T G A+ +
Sbjct: 141 VSRTRPRREAGVMKQHGYRMPDEPEMYVRILTDKGVPMRDIRMYGYDLISTVGEAEALAG 200
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI----PYPIISHDLEENSSIFKIKI 168
VL+VT H PR + + + PY
Sbjct: 201 ILGDRKL-TVLVVTAPVHAPRAGMVFRHALPRCSILTAGSPYDPFPQ-----RWWNDQDA 254
Query: 169 LRVLLIEYLKILLL 182
R LL+E +K L
Sbjct: 255 ARNLLLEGIKTLFY 268
>gi|293400746|ref|ZP_06644891.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305772|gb|EFE47016.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 189
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 13/148 (8%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL-----------TGEPIRIERAF 54
+F+ L + + + K H S +VL T + R+E A
Sbjct: 3 LLIFIILFVLLANLYLYHHFPKPKHPLQDISYDVAIVLGYPCNADGSLSTVQKKRMETAI 62
Query: 55 ELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L + ISG V ++ + + + Q + + I + KA NT N + A
Sbjct: 63 NLYHKHCVHHLLISGSCVQNTYIEAEKMAAYALTQKIPKQAIVLETKARNTYENLKYAKC 122
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++N + +++++T HM R + +
Sbjct: 123 ICDENQWENIIVITSPSHMRRAAFFVHK 150
>gi|225024219|ref|ZP_03713411.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
gi|224943244|gb|EEG24453.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 19/213 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGEP-----------I 48
+R W G+ +CL+ ++ V A VVL G
Sbjct: 10 LRQVWRGIKLCLLVLLVQAAWCTWLVYSYSTRTASRRADAAVVL-GAAAWGKNPSPVFRE 68
Query: 49 RIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI L N K+ +G ++ + ++ + I + + +T+
Sbjct: 69 RINHGITLYRNNRVGKLIFTGGTPKAGYMTEAEVARRYARGHGVPNKDILLETTSRDTQQ 128
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + A N V+I++ YH+ R + Q P P + + +
Sbjct: 129 NLENTKALMYNNGLESVVIISDPYHLARAAAVADYVGLDYQTEPTPTSRYSGQSRAKFMA 188
Query: 166 IKILRVLLIEYLKI---LLLSIQLSLSTQTASQ 195
++L ++ ++ ++ + + L ++ A Q
Sbjct: 189 SEVLSLMAFQWWRLSETVAAYGRDYLLSRQAGQ 221
>gi|310823295|ref|YP_003955653.1| hypothetical protein STAUR_6067 [Stigmatella aurantiaca DW4/3-1]
gi|309396367|gb|ADO73826.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 256
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 26/184 (14%)
Query: 6 YGLFVCLIF----FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE--------------- 46
GL V F G + ++ + A++VL G
Sbjct: 42 LGLAVLYTFSIEPVAGGLMRWVESGAKETYRPEVVYDAVIVLGGGLDPDATERSGRPEYN 101
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC-----CIDIGYK 99
RI R +ELL + +SG + +++ +++ L I +
Sbjct: 102 AAVERILRGYELLREGRARHVLLSGGSLDTRPEAVIEATVLQRQLLAWGIAPERIVVEGH 161
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA ++ E+ + +L++T H+PR + + + + + D +
Sbjct: 162 SRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLAADVRASDGKR 221
Query: 160 NSSI 163
S
Sbjct: 222 PPSW 225
>gi|309781486|ref|ZP_07676222.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308919899|gb|EFP65560.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 168
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 11/160 (6%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPI 85
P IVVL GE R+ A EL ++F+SG + + +++ +P
Sbjct: 16 REEPRLAHADVIVVLGGESGQRVIGAAELYHAGAAPRVFVSGQGDCLLIERRLVMAGVPA 75
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ EC + +T NA+ ++VT YH R ++ +
Sbjct: 76 ERIGHECV------SGSTMENARMTRETLAGQQVQSAILVTSWYHTGRALAVFRKAWPEI 129
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + D S +L EY+K + +++
Sbjct: 130 TWGAQGVFPGDTLAKSVPVYEAGS--ILAEYVKRVWYAVR 167
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P + I++L G R+ +L I ISG
Sbjct: 70 QPPSELNGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYKLDVP-IIISGGQ 128
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
H+ S+ + + I + + E I + ++LNT NA +K+ F+ ++VT
Sbjct: 129 IPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ + V IPYP
Sbjct: 189 FHMKRAVKQFEK--NEVNVIPYP 209
>gi|217976941|ref|YP_002361088.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
gi|217502317|gb|ACK49726.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
Length = 264
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 10/150 (6%)
Query: 45 GEPIRIERAFELLENQIGEKIFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
G+ R+ EL + ++ +G V ++ + ++K + + ++ +
Sbjct: 104 GDGERLIAGIELSKRYPSARLVFTGGSGNLVEQTIVESTGVKKFWLDMGVPPDRMEFESR 163
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ NT NA L+VT +HMPR+ +R+ V P +
Sbjct: 164 SRNTWENALFTRDLLRPKPGETWLLVTSAWHMPRSMGIFRRLGFDVIAYPVAYRTSGDSS 223
Query: 160 NSSIFKIKILR-----VLLIEYLKILLLSI 184
+ S + R + E++ +L +
Sbjct: 224 DWSFLRPAFERVPLVVLAFREWIGLLAYRL 253
>gi|225628868|ref|ZP_03786902.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254706062|ref|ZP_05167890.1| hypothetical protein BpinM_03433 [Brucella pinnipedialis
M163/99/10]
gi|254712252|ref|ZP_05174063.1| hypothetical protein BcetM6_02514 [Brucella ceti M644/93/1]
gi|254715323|ref|ZP_05177134.1| hypothetical protein BcetM_02529 [Brucella ceti M13/05/1]
gi|256029727|ref|ZP_05443341.1| hypothetical protein BpinM2_03558 [Brucella pinnipedialis
M292/94/1]
gi|256157879|ref|ZP_05455797.1| hypothetical protein BcetM4_03368 [Brucella ceti M490/95/1]
gi|256253159|ref|ZP_05458695.1| hypothetical protein BcetB_02424 [Brucella ceti B1/94]
gi|260167184|ref|ZP_05753995.1| Bme2 protein [Brucella sp. F5/99]
gi|261217053|ref|ZP_05931334.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220265|ref|ZP_05934546.1| Bme2 [Brucella ceti B1/94]
gi|261313499|ref|ZP_05952696.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261319923|ref|ZP_05959120.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261756588|ref|ZP_06000297.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986738|ref|ZP_06099295.1| Bme2 [Brucella pinnipedialis M292/94/1]
gi|265996388|ref|ZP_06108945.1| Bme2 [Brucella ceti M490/95/1]
gi|225616714|gb|EEH13762.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260918849|gb|EEX85502.1| Bme2 [Brucella ceti B1/94]
gi|260922142|gb|EEX88710.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292613|gb|EEX96109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261302525|gb|EEY06022.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736572|gb|EEY24568.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262550685|gb|EEZ06846.1| Bme2 [Brucella ceti M490/95/1]
gi|264658935|gb|EEZ29196.1| Bme2 [Brucella pinnipedialis M292/94/1]
Length = 205
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 13/191 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFI 67
F C I + + F + + + D I+V G R +A +L ++ I
Sbjct: 6 FPCAILVGLAAMFFSQPLLTLQ-DDGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILA 64
Query: 68 SGVHHSVSKDILLQKIPIRQD--LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+G + ++ + L EC ++ +T NA+ ++ + + LIV
Sbjct: 65 TGDGDCLLNKHIMMAKGVPPSAILVEC------RSGSTWQNARFSAPLLRRLHAKSALIV 118
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLS 183
T+ +H R + + F P+ D+ ++ ++ EY K L+S
Sbjct: 119 TNWFHSRRAVASFRTACPQMHFTSSPMADADMP-GGFPGTPPVIEHVVKEYAKLGWYLIS 177
Query: 184 IQLSLSTQTAS 194
++ T S
Sbjct: 178 GRIRPQNLTDS 188
>gi|116622945|ref|YP_825101.1| hypothetical protein Acid_3847 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226107|gb|ABJ84816.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 204
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 13/156 (8%)
Query: 36 SVSAIVVLTGE--PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQD-LA 90
VVL G+ R++ A EL++ +I +SG + ++ ++Q
Sbjct: 45 KADVAVVLAGDYWGYRLQHAAELVKQGYVPRILVSGPPGFYGTNESDAAIHWALQQGYPP 104
Query: 91 ECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NST 144
E + + ++A +T A+ + ++N H L+VT +YH R
Sbjct: 105 EWFVAVPHQATSTLAEAKVMLTYMRQHNIHSFLLVTSNYHTARARRIFLGAERDSGGGPE 164
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKIL 180
++ + P + + + +E+ K +
Sbjct: 165 MRVVAAP--DKYFTPEAWWQSREGRKTAFMEWTKTV 198
>gi|146341164|ref|YP_001206212.1| hypothetical protein BRADO4236 [Bradyrhizobium sp. ORS278]
gi|146193970|emb|CAL77987.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 262
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 28/180 (15%)
Query: 32 PDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG----- 69
P + I+VL G R+ +A L ++ +G
Sbjct: 74 PAKGAPDGIIVLGGPVDSDLSAIYGMPVTVAGADRVIQAAVLARRYPNARVLFTGGSANL 133
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + +I +A+ + + ++ NT NA + A L+VT Y
Sbjct: 134 IATDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAPKPGERWLLVTSAY 193
Query: 130 HMPRTFLELQRINSTVQFIPYPI---ISHDLEENS-SIFKIKILRVLLIEYLKILLLSIQ 185
HMPR+ ++ V+ PYP+ + L+ + S+ ++ + + E++ ++ ++
Sbjct: 194 HMPRSVGLFRKAGFPVE--PYPVDWRVGRVLDFDGVSLQGLRRADIAVREWVGLVAYRLR 251
>gi|75906624|ref|YP_320920.1| hypothetical protein Ava_0399 [Anabaena variabilis ATCC 29413]
gi|75700349|gb|ABA20025.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 263
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAF 54
C ++ ++ + + P+ AI+VL G + R+ A
Sbjct: 51 CSNAWVAKYLVRSLEWQNLPPAQLPNAEAIIVLGGATKSVFPPRITPDLSEQGDRVIYAA 110
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+L I +SG S+ + I + + +LNT NA
Sbjct: 111 QLYRQNKAPLIILSGGRIDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVN 170
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENSSIFKIK 167
VL+VT HMPR+ QR V P + + + +L+E + K
Sbjct: 171 VKKILASRGIDKVLLVTSALHMPRSLKIFQRQGMNVIPAPTDFLVSAGELQELGNTPKAA 230
Query: 168 ILRVL------------LIEYLKILLLSIQ 185
IL +L L EY+ + ++
Sbjct: 231 ILNLLPDTYNLHLFTNALKEYVGSFIYWLR 260
>gi|260887636|ref|ZP_05898899.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330837998|ref|YP_004412578.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
gi|260862652|gb|EEX77152.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329745762|gb|AEB99118.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
Length = 252
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVH 71
+ ++G +F D P V LT P R+ A L ++ I +SG
Sbjct: 78 VVIMLGGGAFS---------DAPDVDGEGALTASPSTRLLTAVRL-AQKLDLPILVSGGQ 127
Query: 72 ---HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
S + +L ++ + + E I + + NT NA + +++ ++VT
Sbjct: 128 VFQESGKEALLAKRTLVSLGIPESRILVEGASQNTVQNAAYTAKILKEHGLVRPILVTSA 187
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R+ L +++ ++ +PYP
Sbjct: 188 FHMKRSVLNYEKL--GIEVVPYP 208
>gi|308069364|ref|YP_003870969.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305858643|gb|ADM70431.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 228
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 33/197 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVLT---------GEPIRIE 51
+ +IF ++G + V P IV+ G R+E
Sbjct: 30 RLVLCLMIFILVGLVWAGIRVWDMNTAASTTPLQQVQIGIVLGASMWGAEPSPGLKERLE 89
Query: 52 RAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L N +++ +SG ++ +Q+ + + + I + A +T N
Sbjct: 90 EALRLYRNGTVQRLIVSGGLDKPDFPYTEAEGMQRYLVDRGVPVQHIVLENHATSTYENL 149
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIPYPIIS---------- 154
+ + + +I+TH YH PR L+ + + +++
Sbjct: 150 LYSQRIMSEYGWISTVIITHSYHGPRAMEIAQFLKFDHPQMALTESKVLNMPIHQSREVL 209
Query: 155 --HDLEENSSIFKIKIL 169
+
Sbjct: 210 AYAKWTLQRWWISAQTW 226
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 18/168 (10%)
Query: 1 MRYFWYGLFV--CLIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGEP---------- 47
+RY YG + IF + + + A VVL G
Sbjct: 7 LRYLRYGFLLSILSIFALQAWCAWQVYQYAHAPAALPKHADAAVVL-GAAAWGDKPSPVF 65
Query: 48 -IRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI A L +++ EK+ +G S+ + +K ++Q + I ++ +T
Sbjct: 66 RERINHAIALYQSERVEKLIFTGGTRKEGYPSEGEVARKFALKQGIPSHDIIYETRSKDT 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
N +K+ HHV+IV+ YHM R + + P P
Sbjct: 126 YQNLVNTRLLMQKHKLHHVIIVSDPYHMARAIAIARDLGIPATPSPTP 173
>gi|17989186|ref|NP_541819.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
gi|17985041|gb|AAL54083.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 73.0 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 33 DHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQD--L 89
D I+V G R +A +L ++ I +G + ++ + L
Sbjct: 4 DGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILATGDGDCLLNKHIMMAKGVPPSAIL 63
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
EC ++ +T NA+ ++ + + LIVT+ +H R + + F
Sbjct: 64 VEC------RSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTS 117
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLSIQLSLSTQTAS 194
P+ D+ ++ ++ EY K L+S ++ T S
Sbjct: 118 SPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLISGRIRPQNLTDS 163
>gi|85715468|ref|ZP_01046449.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
gi|85697663|gb|EAQ35539.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
Length = 266
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 74/225 (32%), Gaps = 48/225 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFI------SFIRYVKQMHIP---DHPSVSAIVVL--------- 43
R GL I ++ F + + + P D + I++L
Sbjct: 35 RRTGLGLLTAGIAALLIFGYSPLSNVLLLTLSERFPPWHFDGRAPDGIIILGGSIQPPLS 94
Query: 44 --------TGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC--- 92
G R+ EL + ++ SG +++ ++ PI L E
Sbjct: 95 VARQTVEIDGAAERVIGGLELAQRFPEARVVYSGGSGQLTEGS-AREAPIAGSLFERFGI 153
Query: 93 ---CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I + ++ T NA+ + L+VT YHMPR+ ++ V+ P
Sbjct: 154 TPERIVLENESRTTYENARFSRELVAPKPGERWLLVTSAYHMPRSIGVFRKAGFEVE--P 211
Query: 150 YPIISHDLEENSSIFKIKILRVL----------LIEYLKILLLSI 184
YP+ D I + L + E++ +L +
Sbjct: 212 YPV---DWRTRGWIDAWRPFNRLTTGLACADIAVHEWVGLLAHWM 253
>gi|312796171|ref|YP_004029093.1| integral membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167946|emb|CBW74949.1| Integral membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 239
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 25/164 (15%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI---------------RIERAFE---LLENQIGE-KIF 66
V P + AIV+L RI+ A L Q + +
Sbjct: 52 VPAASPPRYGGNVAIVLLGSGTEYDDAHRLVPKFDAWRRIDAAAAQFILCRAQRAQCTLV 111
Query: 67 ISGVHHSVSKDILLQKIP---IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+SG + + + + I + +LNT NA+ A ++++ ++
Sbjct: 112 VSGGNPQKHEHSEAANYQPHLVSHGVPAANIVLEPDSLNTYENARNTGAILRRHHYDQIV 171
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
++T YH+PR L+ + +P ++ S
Sbjct: 172 LITSAYHLPRALLDFHHF--GIDVVPLA-SNYRWRRPSWRPHPA 212
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 72.6 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 23/193 (11%)
Query: 8 LFVCLIFFIMGF---ISFIRYVKQMHIPDHPSV--SAIVVLTGEP---IRIERAFELLEN 59
+ + ++ I F ++ Y+ +P AIVVL P R A EL +
Sbjct: 76 IALVVLALIATFPPVVTLANYLLVSPLPQDTGARVDAIVVLGRGPISGDRAAVAAELWQA 135
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLA--ECCIDIGYKALNTEGNAQEASAWAEKN 117
K+F+SG + L+K + E C + TE NAQ + +
Sbjct: 136 GRAPKVFVSGRGDAPYLVKELRKYGVSASALASEDC------SQTTEENAQFTARLLQPQ 189
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYL 177
H+L++T HM R+++ +R+ + +I H + K + EY
Sbjct: 190 GVQHILLITDSPHMLRSWMTFERVG-------FQVIPHGNALPHWLSHRKHALTVYREYA 242
Query: 178 KILLLSIQLSLST 190
++ ++Q +
Sbjct: 243 GLISYTLQGRIQP 255
>gi|294675706|ref|YP_003576321.1| hypothetical protein RCAP_rcc00149 [Rhodobacter capsulatus SB 1003]
gi|294474526|gb|ADE83914.1| protein of unknown function DUF218 [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 72.6 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 9/135 (6%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L + + + ISG +V + +R +AE + + A NT NA
Sbjct: 40 AIALYRSGLTRTLLISGAGTAVDGSAEWSFYRDHALRAGVAESALLLEKNARNTAENAAF 99
Query: 110 ASAWAEKN----NFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPI-ISHDLEENSSI 163
+A + + +HM R + L+R + V+ + P DL +
Sbjct: 100 GAALIGTELGWAKIRSLAVCAKPFHMRRALMTLRRHVPPEVRLVAQPPDDPGDLSAETWW 159
Query: 164 FKIKILRVLLIEYLK 178
+ + + E K
Sbjct: 160 QTAQGRKRIFTELGK 174
>gi|255068057|ref|ZP_05319912.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047655|gb|EET43119.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 214
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 3 YFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + G+ + ++ + F + + +P H A +VL G
Sbjct: 14 YLFRGIGLSILLVLGIFGEGAWQVYHTGSQPLPGHVRADAALVL-GAAAWDKRPSPIFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ EKI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVEKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
N + ++IV+ YH+ R I S + Y
Sbjct: 133 NIRNIRPILRAEGIGSIIIVSDPYHLARAL----EIASDLDIEAY 173
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 18/149 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RI 50
+ YG+ + + I+ I + + I+VL G R
Sbjct: 6 KLVLYGIGILVFLVIIFAFQVIYFGESSKPE---KSDCIIVL-GCKVYGSTPSPFLIWRT 61
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+ L + G+ I +SG S+S+ +++ + + + I + K+ +T N
Sbjct: 62 DEGLRLFKEGYGKYIIVSGGKGQGESISEAEAMKRYLVSKGVDSSKIILEDKSASTMANL 121
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + EK NF +IV++ YH+ R L
Sbjct: 122 INSKSIMEKKNFKTAIIVSNKYHLKRASL 150
>gi|114566272|ref|YP_753426.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337207|gb|ABI68055.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 211
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 23/196 (11%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTG-EPIRIERAFELLENQIGEK 64
LF+C+I + + F + D P I+VL G P RI A EL E
Sbjct: 8 ALFICIILLALLAVFFRYAGVGIVSSDSPEKADFIIVLMGSGPDRILGAVELYEKGYAPY 67
Query: 65 ------------IFIS-GVHHSVSKDILLQKIPIRQDLAE-CCIDIGYKALNTEGNAQEA 110
+ S GV L + ++ + E I + A +T+ A
Sbjct: 68 IMMVENWQPGYELLESRGVE-LPRDAELAASVGVQLGIPEEAFIILPGDARSTQDEALIV 126
Query: 111 SAWAEKN--NFHHVLIVTHDYHMPRTFL----ELQRINSTVQFIPYPIISHDLEENSSIF 164
+ + ++ VL+V+ +H R L V+ + P D +
Sbjct: 127 TQYLKEQQAGVDMVLLVSSKFHSKRAAKIFCWALADSGQDVKVLSCPTPYDDFNAAAWWQ 186
Query: 165 KIKILRVLLIEYLKIL 180
+ + ++ EY+K++
Sbjct: 187 SREDAKRVVSEYVKLV 202
>gi|159186332|ref|NP_355852.2| hypothetical protein Atu4812 [Agrobacterium tumefaciens str. C58]
gi|159141466|gb|AAK88637.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 232
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 15/194 (7%)
Query: 3 YFW------YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG-EPIRIERAFE 55
+ W G+ + + G + IVVL G P R +A +
Sbjct: 33 WLWKRNSIVLGVIILGAIGLYGLALVSAGSLLVVEDPPAQADVIVVLGGDGPPRAAQAAK 92
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + ++G ++ + +R + + +L+T NA A
Sbjct: 93 LWHEGKAPLVLVTGYGDC----DFIRDMLVRSGVDFAAVSTECLSLSTWENATFAQPILT 148
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP-IISHDLEENSSIFKIKILRVLLI 174
++VT +H R + + +Q+I P + L + +
Sbjct: 149 GMGAKRAILVTSWFHSRRAVKRFRFVMPQIQWISLPAQRTVSLWRLAINGDGVQV---FK 205
Query: 175 EYLKILLLSIQLSL 188
EY K L ++ S
Sbjct: 206 EYAKALFYDVRSSF 219
>gi|15606980|ref|NP_214362.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
gi|2984233|gb|AAC07762.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
Length = 241
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 30 HIPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG-----VHHS 73
P+ AIVVL G R+ F LL ++ + I +SG V
Sbjct: 66 KKPEVLKGDAIVVLGGGVYNNGRLKASSFKRLITGF-LLYKELKKPIILSGGASINVIPE 124
Query: 74 VSK-DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN-NFHHVLIVTHDYHM 131
LL+ + ++ I ++ +T NA+ EK V++VT +HM
Sbjct: 125 AKVMKELLRSFGVPEE----DIYTDVRSRDTFENAKFVKEMCEKLLKCKEVILVTSGFHM 180
Query: 132 PRTFLELQRINSTVQFIPYPI---ISHDLEENSSIFKIKIL---RVLLIEYLKILLLSIQ 185
PR ++ ++ IPYP S K + + + EY+ +L ++
Sbjct: 181 PRAVGVFKKA--GLEVIPYPTDLKFEGKYNVYSLFPKYSVFYDSSIAIREYIGLLFYKLK 238
>gi|78186865|ref|YP_374908.1| hypothetical protein Plut_1003 [Chlorobium luteolum DSM 273]
gi|78166767|gb|ABB23865.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 196
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 11/185 (5%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIF 66
L V I GF+S + ++ IV+L G+ R+ + EL N ++
Sbjct: 12 LLVAAILAGAGFLS-LGFLLSCQAGTPEKTDVIVILGGDSGRRVRKGAELYRNGYAPRVI 70
Query: 67 ISGVHHS-VSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
++G+ L QK + + I + ++ T A + ++N + L
Sbjct: 71 LTGIDERYYRPGKLNWRQKRMVALGVPLSAISVDSRSETTWEEAFNTAETMKRNGWKKAL 130
Query: 124 IVTHDYHMPRT----FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
+V+ HM R ++ + I R + E K
Sbjct: 131 VVSDPPHMFRLKSTWMQAFRKTPRSFILIAT--SPEWWNPVLWWKNSISSRFVYSELKKN 188
Query: 180 LLLSI 184
L ++
Sbjct: 189 LFYAL 193
>gi|21241154|ref|NP_640736.1| hypothetical protein XAC0380 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106459|gb|AAM35272.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 201
Score = 72.2 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I +I Q I+VL RI
Sbjct: 13 WGWRLCMLALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 67
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 68 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNL 127
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 128 EQARTLMERHGLHRAIIVSDPLHMARAL 155
>gi|189500318|ref|YP_001959788.1| hypothetical protein Cphamn1_1378 [Chlorobium phaeobacteroides BS1]
gi|189495759|gb|ACE04307.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 196
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 65/177 (36%), Gaps = 8/177 (4%)
Query: 16 IMGFISFIR--YVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH 72
++G + F Y+ + I+VL G+ R+++ L + ++G+
Sbjct: 17 VIGVLVFAGLGYLVSSYQSKPEKADVIIVLGGDDGPRVDKGGSLFNAGYAPNVVLTGIDS 76
Query: 73 SV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
S+ ++ + + I++ + T A + A ++ +++ ++V+
Sbjct: 77 RYYRPSRPNWRERRLAEAGVPQTAINVDTTSETTWEEALNSVAMMQEKGWNNAIVVSDPP 136
Query: 130 HMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
HM R + + S+ FI + + R ++ E K + +
Sbjct: 137 HMLRLHSTWKRAFKGSSKSFILVATSPEWWKPHLWWQNETSYRFVISEIKKNIYYRV 193
>gi|110633719|ref|YP_673927.1| hypothetical protein Meso_1366 [Mesorhizobium sp. BNC1]
gi|110284703|gb|ABG62762.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 266
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 38/215 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQM-------HIPDHPSVSAIVVLTGE------------ 46
+G+F L+ + G+ +F + P V I+VL G
Sbjct: 41 FGVFAFLVVALAGWTTFGAMLLHPLESRFARPDPAPQHVDGIIVLGGGFEGAVNLARGGY 100
Query: 47 -----PIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDI 96
R A L ++ +SG ++ +A I++
Sbjct: 101 ELNDSGDRFVEAAILARRYPEARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERIEL 160
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII--- 153
++ +T NA+ + + AE L+VT +HMPR ++ +P+P
Sbjct: 161 DNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQA--GFPILPWPADYKT 218
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
L +++ + ++ + + E++ +L +
Sbjct: 219 TGREKPGLTDDNVLDSLRNTSIGIREWVGLLAYRM 253
>gi|114704894|ref|ZP_01437802.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
gi|114539679|gb|EAU42799.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
Length = 270
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 62/186 (33%), Gaps = 31/186 (16%)
Query: 28 QMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGV 70
+ +P V I+VL G R + L G + SG
Sbjct: 70 ERPVPMPAEVDGIIVLGGAFDTRVARTRGVIELNEAADRASVSVALARTYPGADVLFSGG 129
Query: 71 HHSVSKDIL-----LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ ++ + ++ + L + + KA +T NA A A A+ L+V
Sbjct: 130 VAAAFREDIPETQSAEQFYLGLGLDPNRLKLDGKARDTFENAVYAKALADPQPGETWLLV 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLE-ENSSIFKIKILRVL------LIEYLK 178
T YHMPR + + V +PYP+ E + R L + EY+
Sbjct: 190 TSAYHMPRAMGCFRTVGFDV--VPYPVDYRTPEGADVWRPSTATTRNLEKVHFAIREYIG 247
Query: 179 ILLLSI 184
+
Sbjct: 248 LAAYWA 253
>gi|205374987|ref|ZP_03227778.1| hypothetical protein Bcoam_18347 [Bacillus coahuilensis m4-4]
Length = 200
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 8/192 (4%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPI--RIERAFELLE 58
+ W+ ++ + + F R + + P I+VL+G R A +L
Sbjct: 10 KMVWFLFIFVMVLVLAMILLFKRSHTLLVEKNPPVPADVILVLSGGAQGEREAEAAKLYH 69
Query: 59 NQIGEKIFIS--GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ I +S V + ++++ I + + I +T A++A E+
Sbjct: 70 EGYTDTIVVSMAKVGWNTYTGDIMREHLIHLGVPDNAILTYGDVTSTREEAEQAVPLLEE 129
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
+++ T +H R +R ++ I P+ + + + +
Sbjct: 130 LAVRKMILTTSSFHSGRAKWIFERTLKEKGIEVISVPVREEEFGSD-WWQTHETRKQGAS 188
Query: 175 EYLKILLLSIQL 186
E LK + +L
Sbjct: 189 ELLKYVWEWFRL 200
>gi|319788557|ref|YP_004148032.1| hypothetical protein Psesu_2977 [Pseudoxanthomonas suwonensis 11-1]
gi|317467069|gb|ADV28801.1| protein of unknown function DUF218 [Pseudoxanthomonas suwonensis
11-1]
Length = 202
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELLEN 59
V I ++ G ++I +V I+VL RI L
Sbjct: 20 VLAILWLGGVAAWINWVGHRDQAQ--RADVIIVLGAAAYDARPSPVFEERIRHGLNLYRA 77
Query: 60 QIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ +G + + ++ + Q+ +RQ + E I I + T N +A +
Sbjct: 78 GYAPVLLFTGGYGTGARFAESQVAQRYAVRQGIPEEAILIETASRTTLQNLLQARELMRE 137
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
H +IV+ HM R +++ P P
Sbjct: 138 RQLHSAIIVSDPLHMSRALRLCRQLGIEATGSPTP 172
>gi|325922970|ref|ZP_08184680.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
gi|325546551|gb|EGD17695.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
Length = 205
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + I+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMLAAIWLVGVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I ++ T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETESRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
Q+A A E++ H +IV+ HM R
Sbjct: 132 QQARALMERHGMHRAIIVSDPLHMARAL 159
>gi|238027594|ref|YP_002911825.1| hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
gi|237876788|gb|ACR29121.1| Hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
Length = 238
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 30/198 (15%)
Query: 4 FWYGLFVCLIFFIMGFISFIRY-VKQMHIPDHPSVSAIVVL-TG-------------EPI 48
+ + ++ V P +AI+VL G
Sbjct: 29 LALLAGIATGWLTAPLVALAESGVAPAEPPVFAGRTAIIVLGAGIKRHDGLLVPPENGLA 88
Query: 49 RIERAFEL--LENQIGEK--IFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
RI RA EL + G + + ++G ++ L + + + + + + ++
Sbjct: 89 RIARAAELHSACQRSGARCTVIVTGGDPHRHGTTEADLYAPLLLERGVPPRDLTLERRSR 148
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--- 158
T NAQ + ++ ++VT Y M R L+ R P P+ ++
Sbjct: 149 TTYENAQYTAPILLAKHYDETILVTSSYQMRRALLDFARFG----VTPQPVFANRDRAIC 204
Query: 159 -ENSSIFKIKILRVLLIE 175
L E
Sbjct: 205 GWRPRWTNFVTASRALHE 222
>gi|262195869|ref|YP_003267078.1| hypothetical protein Hoch_2653 [Haliangium ochraceum DSM 14365]
gi|262079216|gb|ACY15185.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 199
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 12/122 (9%)
Query: 31 IPDHPSVSAIVVLTG-----------EPIRIERAFELLENQIGEKIFISGVHHSVSKDIL 79
AIVVL R++ A L + G ++ ++G + +
Sbjct: 31 PDAIEPADAIVVLGAPVLAPGRLSEVGRERVDAAVSLYQRGAGPRLCVTGGGPAGRVEAD 90
Query: 80 LQKIPIR-QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
R + L E + I +A NTE NA+ A+A V +V+ +H+ R +
Sbjct: 91 AMAAHARARGLPEEALRIERQARNTEENARFAAAMLRAEGCRSVWLVSQPFHLARACVWF 150
Query: 139 QR 140
+R
Sbjct: 151 RR 152
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 71.8 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +G + + V S AI VL G+P R + A EL + I++
Sbjct: 4 LIPITLLLSLGVVWGLNRVA----VAQRSPQAIFVLGGDPQREQFAAELAQTHPDLPIWV 59
Query: 68 S-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S G + ++ + Q R L + Y+A +T N + ++ HV +VT
Sbjct: 60 SSGSNPEYAEWVFSQAGVPRSRLH-----LDYQATDTLSNFTSLADRFQQQGIQHVYLVT 114
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFK 165
DYHM R + + + + F P P+ S + S K
Sbjct: 115 SDYHMRRALVIANIVFASRGITFEPVPVPSD--RASESWRK 153
>gi|241663925|ref|YP_002982285.1| hypothetical protein Rpic12D_2339 [Ralstonia pickettii 12D]
gi|240865952|gb|ACS63613.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 190
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 11/186 (5%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQI 61
W G + + P IVVL GE R+ A EL
Sbjct: 12 LAWIGGCAIVAMAFSAVLVCGAKSWLREEPRLAHADVIVVLGGESGQRVIGAAELYHAGA 71
Query: 62 GEKIFISGVHH--SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++F+SG + + +++ +P + EC + +T NA+
Sbjct: 72 APRVFVSGQGDCLLIERRLVMAGVPAGRIGHECV------SGSTMENARMTRQTLAGQQV 125
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
++VT YH R +++ + + + D S +L EY+K
Sbjct: 126 QSAILVTSWYHTGRALAVFRKVWPEITWGAQGVFPGDTLAKSVPVYEAGS--ILAEYVKR 183
Query: 180 LLLSIQ 185
+++
Sbjct: 184 AWYAVR 189
>gi|323142298|ref|ZP_08077130.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
gi|322413182|gb|EFY04069.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
Length = 258
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 33/213 (15%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-AIVVLTGEP---------------- 47
+ L + ++G + ++ +I P + IVVL G
Sbjct: 46 FLTLLLYFSSTLLGAKLLGQPLENRYIQQQPDAAQVIVVLGGGSVGSAPDGTERGGLMSA 105
Query: 48 --IRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ A L + + ISG VS+ ++ ++I ++ L + I + +A
Sbjct: 106 GAARLLTAARLAKQHSLP-VLISGGQVFRDGVSEALVAERILLQLGLPQEQIIVETQART 164
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYP---IISHDL 157
T+ NA + + + VL++T HMPR+ +R V+ YP ++
Sbjct: 165 TKENAAYTAMHCRERGYQSVLLLTSALHMPRSMQFFERYLGEQGVKVAAYPCDYTLNPQG 224
Query: 158 EENSSIFKI-----KILRVLLIEYLKILLLSIQ 185
+ N + + L EY+ + +Q
Sbjct: 225 KFNPRWLVPQLQAFDVTCMALHEYVGMAGAFLQ 257
>gi|158335605|ref|YP_001516777.1| hypothetical protein AM1_2455 [Acaryochloris marina MBIC11017]
gi|158305846|gb|ABW27463.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 261
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 84/223 (37%), Gaps = 48/223 (21%)
Query: 6 YGLFVCLIFFIM-GFIS--FIRYVKQMHIP--DHPSVSAIVVLTG--------------- 45
GL + ++FF G++ + ++ + P + AIVVL G
Sbjct: 41 VGLALGILFFSANGWVGDGLLYSLEHQYPPLKQDATADAIVVLGGCTRSAHPPRPWVEVS 100
Query: 46 -EPIRIERAFELLENQIGEKIFISGV---------HHSVSKDILLQKIPIRQDLAECCID 95
R+ A +L K+ ++G ++ LL+ + + + +
Sbjct: 101 EAGDRVLYAAKLYREGKAPKVVLAGGRIYWKGGGQAEALDMAELLKIMGVPESA----LL 156
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ +LNT NA ++NN +L+VT +HMPR+ + +V P
Sbjct: 157 LEPDSLNTFENATNVKRVLKQNNIDGPLLLVTSAFHMPRSMAIFETQGLSVIAAPTDYQV 216
Query: 155 HDLEENSSIFKIKILRVL------------LIEYLKILLLSIQ 185
++ EN+ +LR+L E++ L+ ++
Sbjct: 217 TEVNENAGFL-GFVLRLLPDIEALVNTTIAFKEWIGFLMYRLR 258
>gi|75675900|ref|YP_318321.1| hypothetical protein Nwi_1708 [Nitrobacter winogradskyi Nb-255]
gi|74420770|gb|ABA04969.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 280
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 39/185 (21%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGVHHSVS 75
D I+VL G R+ A EL +I SG
Sbjct: 90 DGRDPDGIIVLGGAVDADISVSRGAVETNASAERVIAALELARRFPKARIVYSG-GAGNL 148
Query: 76 KDILLQKIPIRQDLAEC------CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
L + P+ L E I + ++ T+ NA+ + + L+VT Y
Sbjct: 149 IAGLRAEAPVMGRLFEQFGIPRERIVLETRSRTTDENARFTRELVKPESGERWLLVTSAY 208
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSSI--------FKIKILR--VLLIEYLKI 179
HMPR+ ++ V+ PYP+ D I + R E++ +
Sbjct: 209 HMPRSVGVFRKAGFDVE--PYPV---DWRTRGWIDAWMPFDKLSAGLARADTAAHEWVGL 263
Query: 180 LLLSI 184
L+ +
Sbjct: 264 LVYRM 268
>gi|34499583|ref|NP_903798.1| hypothetical protein CV_4128 [Chromobacterium violaceum ATCC 12472]
gi|34105434|gb|AAQ61789.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 190
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 33 DHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE 91
P IVVL GE R+ A EL +F+SG + LQ + +
Sbjct: 38 PQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRG--- 94
Query: 92 CCIDIGYK--ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
IGY+ + +T NA + +VT +H R ++ V++
Sbjct: 95 ---KIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGM 151
Query: 150 YPIIS-HDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ + +DL + + ++ + L EYLKIL+ S++
Sbjct: 152 HIVYPGNDLYHSLAWYEAGAV---LTEYLKILVYSVR 185
>gi|311697190|gb|ADQ00062.1| protein containing DUF218 [marine bacterium HP15]
Length = 159
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGV-HHSVSKD-ILLQKIPIRQDLAECCIDIGYKA 100
L R+ A L + ++G S S +++ + + + ++
Sbjct: 13 LESGADRVWHAARLFNASKAPLVLLTGGSDPSHSAASEAMRQFMRDLRVPGQALVLESRS 72
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLE 158
NT NA+ ++ + + +L+VT YHMPR + V + + ++S L
Sbjct: 73 RNTSQNAEYSAEILTEQGVNRILLVTFAYHMPRAKALFEAQGLEVILVATDHEVLSRPLW 132
>gi|116623760|ref|YP_825916.1| hypothetical protein Acid_4672 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226922|gb|ABJ85631.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 207
Score = 71.4 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 32/190 (16%)
Query: 3 YFWYGLFVCLIFFIM----GFISFIRYVKQMHIPDH----PSVSAIVVLTG-EP------ 47
+ W + + L +I+ + + + P+ AI VL G P
Sbjct: 4 WLWTAVALVLGGYILSAPLAGRWMLERLANQYPEMPVSSCPTADAIAVLAGTGPPRAGEM 63
Query: 48 ------IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+E LL ++ ++ + L++IP + L A
Sbjct: 64 RRGEPLNRMEAGITLLRAGRAPRLVMA---TDGEEAKGLREIPDDRVLQL------RPAR 114
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEE 159
+T A+ A + ++H +++VT +HM R E +R + V+ P +
Sbjct: 115 DTADEARRIVGEARQQSWHRLILVTSGFHMGRALREFRRAAERAGVELTVIPFAADPQVY 174
Query: 160 NSSIFKIKIL 169
K
Sbjct: 175 ERWPPAAKSW 184
>gi|153832463|ref|ZP_01985130.1| integral membrane protein [Vibrio harveyi HY01]
gi|148871258|gb|EDL70130.1| integral membrane protein [Vibrio harveyi HY01]
Length = 268
Score = 71.4 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWHEYLGGLWQKLRDNVGQTP 256
>gi|261379601|ref|ZP_05984174.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284798080|gb|EFC53427.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 218
Score = 71.4 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLSGTWQIYRTGSHTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|306840763|ref|ZP_07473510.1| Bme2 protein [Brucella sp. BO2]
gi|306289158|gb|EFM60407.1| Bme2 protein [Brucella sp. BO2]
Length = 189
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 33 DHPSVSAIVVLTG-EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQD--L 89
D I+V G R +A +L ++ I +G + ++ + L
Sbjct: 13 DGRPADVIIVPGGDGAPRAAQAAQLWKDGRSPYILATGDGDCLLNKHIMMAKGVPPSAIL 72
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
EC ++ +T NA+ ++ + + LIVT+ +H R + + F
Sbjct: 73 VEC------RSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFAS 126
Query: 150 YPIISHDLEENSSIFKIKILRVLLIEYLK--ILLLSIQLSLSTQTAS 194
P+ D+ ++ ++ EY K L+S ++ T S
Sbjct: 127 SPVADADMP-GGFPGTPPVIEHVVKEYAKLGWYLISDRIRPQNLTDS 172
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPAERIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRVWPEVAWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EYLK +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLKRAWYAVR 189
>gi|206889829|ref|YP_002248307.1| hypothetical protein THEYE_A0462 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741767|gb|ACI20824.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 235
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 37 VSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKI 83
AIV+L G R+ + + I +SG V +S + +
Sbjct: 74 ADAIVILGGGVYSWASFPEDSSNRLFTGYLVYRKTKLP-IIVSGGAVEGKISDSAAMAAM 132
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + I K+ +T NA + ++ +F V++VT YHM R ++
Sbjct: 133 LKEFGVEDSKIIEENKSRDTAQNALYVAKICKEKSFKKVILVTSAYHMKRAVKFFKQA-- 190
Query: 144 TVQFIPYP 151
++ +PYP
Sbjct: 191 GLEVLPYP 198
>gi|187929799|ref|YP_001900286.1| hypothetical protein Rpic_2729 [Ralstonia pickettii 12J]
gi|187726689|gb|ACD27854.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 192
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 11/162 (6%)
Query: 29 MHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPI 85
P IVVL GE R+ A EL + ++F+SG + + +++ +P
Sbjct: 38 REEPRLAQADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGQGDCLLIERRLVMAGVPA 97
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
+ EC + +T NA+ ++VT YH R +++ V
Sbjct: 98 ERIGHECV------SGSTMENARMTRGTLAGQQVQSAILVTSWYHTGRALAVFRKVWPEV 151
Query: 146 QFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLS 187
+ + D S +L EY+K +++
Sbjct: 152 TWGAQGVFPGDTLAKSVPIYEAGS--ILAEYVKRAWYAVRYR 191
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 71.0 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 24/143 (16%)
Query: 30 HIPDHPSVSAIVVLTGEP------------------IRIERAFELLENQIGEKIFISGV- 70
P + I++L G R+ +L I ISG
Sbjct: 70 QPPSELNGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLYYKLDVP-IIISGGQ 128
Query: 71 --HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
H+ S+ + I + + E I + ++LNT NA +K+ F+ ++VT
Sbjct: 129 IPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSA 188
Query: 129 YHMPRTFLELQRINSTVQFIPYP 151
+HM R + ++ + V IPYP
Sbjct: 189 FHMKRAVKQFEK--NEVNVIPYP 209
>gi|87301698|ref|ZP_01084538.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
gi|87283915|gb|EAQ75869.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
Length = 266
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 23/140 (16%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
++ P AIVVL G R+ LL +Q + +
Sbjct: 65 ARSARLTPAPVPRGDAIVVLGGGLRAALPPRAGVEVNEAGDRLLSGIRLLRDQRAPLLLL 124
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + ++ I + + + + + + +A T A++ + +
Sbjct: 125 SGGRVSFSGGDPAPAEAISARSLALELGVPADRLLVSDQARTTAEEARDLRRIGQSRGWS 184
Query: 121 HVLIVTHDYHMPRTFLELQR 140
VL+VT HMPR +R
Sbjct: 185 TVLLVTSALHMPRALASFRR 204
>gi|237748053|ref|ZP_04578533.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379415|gb|EEO29506.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 203
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 31/191 (16%)
Query: 2 RYFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP----------- 47
++ L +F I F F + + + A ++L G
Sbjct: 3 KWIKVALVSFCVFLIYIFCSIAWFS------TVDEKKTADAAIIL-GAAAWYKRPSPVFE 55
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTE 104
RI L +N +K+ +G S+ + ++ ++ + E I I ++L T
Sbjct: 56 ERINHGIWLYKNGYVKKLIATGGKSKNAPFSEAFVARRYAMKNQIPEEDILIEEESLTTR 115
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
N Q A E+N+ +IV+ HM R +I + + + + + S
Sbjct: 116 ENLQNAKKLMEENHLSSAIIVSDPMHMRRAM----QIANDLGIKAWSSPTPSTKYASWQA 171
Query: 165 KIKILRVLLIE 175
K ++ L E
Sbjct: 172 K---IQFLFQE 179
>gi|289664371|ref|ZP_06485952.1| hypothetical protein XcampvN_15203 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668148|ref|ZP_06489223.1| hypothetical protein XcampmN_06538 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 205
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMLALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 132 EQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 40/205 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGEP----------- 47
+ +FW + + +S + V Q P P AI++L G
Sbjct: 15 IAFFW---LLSAGWLTAPLLSLAQPVAQTSPPASFAPRT-AIILLGGGTVYNRDKVLVPP 70
Query: 48 ----IRIERAFELLENQIGEK------IFISGVHHS---VSKDILLQKIPIRQDLAECCI 94
RI+ + ++ + +SG + S+ +R+ + I
Sbjct: 71 REVLARIDVSARNYAA--CKRTATVCTVIVSGGNPQRHPASEADTYLPYLLREQVPRSDI 128
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ ++L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS
Sbjct: 129 VLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFGLD----PQPLIS 184
Query: 155 HDLEEN----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 185 SARRARLGVLPRYSNLANAEIALHE 209
>gi|269963112|ref|ZP_06177447.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832076|gb|EEZ86200.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWHEYLGGLWQKLRDNVGQTP 256
>gi|298492074|ref|YP_003722251.1| hypothetical protein Aazo_3520 ['Nostoc azollae' 0708]
gi|298233992|gb|ADI65128.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 76/223 (34%), Gaps = 39/223 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------E 46
L VC ++ + + + + + P AIVVL G
Sbjct: 43 LSLTLLLVCGNAWVAKNLVRSLEWQNIPLAEIPQAEAIVVLGGATKSGVWPRPTVDLSES 102
Query: 47 PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ A +L + I +SG + + + I + I +L
Sbjct: 103 GDRVIYAAQLYRQKKAPIIVLSGGRIDWRGSASQESTDMAAILTSIGIPSEAIIQEPDSL 162
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDL 157
NT NA E VL+VT H PR QR + IP P + +L
Sbjct: 163 NTYQNAVNVKETLENRGIKKVLLVTSAMHTPRALKIFQR--QGIDVIPAPTDFLVSQGEL 220
Query: 158 EENSSIFKIKILRVL------------LIEYLKILLLSIQLSL 188
+E +S K IL +L L EY+ ++ S++ L
Sbjct: 221 QELTSSPKGAILNLLPDTTNLYQFTNALKEYIGSVIYSLRGWL 263
>gi|117924002|ref|YP_864619.1| hypothetical protein Mmc1_0692 [Magnetococcus sp. MC-1]
gi|117607758|gb|ABK43213.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 229
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 9/173 (5%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHSV 74
+ G+ +++ P AIVVL G P R + F+LL +++ G V
Sbjct: 49 LGGWKQAAQWLVITQPPAV--ADAIVVLGGGIPTRPKMGFQLLHQGWAKRLIFVGDRPHV 106
Query: 75 SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ D A + + + +T + Q + +L+VT YH R
Sbjct: 107 -LTQVGHSYCPACDFARPEVTLLGLSRSTLDDLQRVLPHIQGGLNRRILLVTDPYHTRRA 165
Query: 135 FLELQRIN--STVQ---FIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
+ + ++ + + + +V+L E+ K L
Sbjct: 166 DWIARHLLNQHGIEVRTISSNAYFKMNAPQTPWWQDLPTRQVVLSEWTKFLFY 218
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPAERIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQSVRSAVLVTSWYHTGRALRAFRRVWPEVAWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLK 178
D S +L EYLK
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLK 182
>gi|90419579|ref|ZP_01227489.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336516|gb|EAS50257.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 66/215 (30%), Gaps = 39/215 (18%)
Query: 7 GLFVCLIFFIM-------GFISFIRYVKQMHIPDHPSV-SAIVVLTGE------------ 46
GLFV + G + + PD P I+VL G
Sbjct: 40 GLFVLATATLAVCSLTPLGLVMTAVLEDRFPRPDLPPAIDGIIVLGGAFDTRVARTRGMN 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDI 96
R+ EL + K+ SG + + + + LA + +
Sbjct: 100 ELNDAADRVTAGMELAQRYPKAKLLFSGGVAALLEEDIPETEAAEALYRGLGLAPDRLLL 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+A +T NA A A+ ++VT HMPR + +PYP+
Sbjct: 160 DGRARDTFENAVFAKELAQPKPGEVWVLVTSASHMPRAVGCFRVA--GFDIVPYPVDYRT 217
Query: 157 LEENSSIF-KIKILRVL------LIEYLKILLLSI 184
+ R L + EYL ++ +
Sbjct: 218 PSGPALWRPSSTTTRNLEKVHFAIREYLGLVAYRL 252
>gi|312144373|ref|YP_003995819.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
gi|311905024|gb|ADQ15465.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
Length = 252
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 78/217 (35%), Gaps = 31/217 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA-----IVVLTGE--------- 46
+++ + LIF F + + + + SV IVVL G
Sbjct: 38 IKFLATATLIFLIFISTAFGVKVLLLPLENYAEEISVDLEEDHPIVVLGGGNYYKTDGSA 97
Query: 47 ------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIG 97
R+ +A+EL + I+ GV H + S+ ++ L +
Sbjct: 98 EPSVHSKQRLAKAYELHRTLNTKIIYSGGVGLGHDNFSEADAAKEFLSGLGLESEKYESE 157
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP---IIS 154
+A +T NA W +N + +VT YHM R+ + + F+ + I
Sbjct: 158 DQARSTYENALYIKKWLNENEIERIYLVTSAYHMYRSARAFRA--QEIDFLAHHSGFIYD 215
Query: 155 HDLEENSSIFKIKILRV---LLIEYLKILLLSIQLSL 188
H + + L+V L E++ I+ ++ +
Sbjct: 216 HKFSWLNYLPNRGALQVNLSALHEWVGIVWYYLRARI 252
>gi|156973875|ref|YP_001444782.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
gi|156525469|gb|ABU70555.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFNAA--GIKPIPAPTNFMAIDDIEQPWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL L ++ ++
Sbjct: 223 YAPKARYLEQTELYWYEYLGGLWQKLRDNVGQTP 256
>gi|298370445|ref|ZP_06981761.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281905|gb|EFI23394.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 199
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 17/148 (11%)
Query: 2 RYFWYGLFVCLIFFIM-GFIS---FIRY---VKQMHIPDHPSVSAIVVLTGEPI------ 48
+ W G + +++ ++ G++ F R V+ + D + I V
Sbjct: 4 KILWIGTGLVILWLLLFGWVWGNNFYRSRQPVESIAPADTAVILGISVHDEGRQNPCLIS 63
Query: 49 RIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E EL + +K+ +SG H + + + + I++ + T N
Sbjct: 64 RVEAGVELWKAGKVKKLIMSGGMNHDGYVGAQSMMQTAEKMGIPREVIELEDHSETTHQN 123
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ E++ V+IV+ YH+PR
Sbjct: 124 ILYTAPMIEQD--KSVVIVSSAYHIPRA 149
>gi|17229959|ref|NP_486507.1| hypothetical protein alr2467 [Nostoc sp. PCC 7120]
gi|17131559|dbj|BAB74166.1| alr2467 [Nostoc sp. PCC 7120]
Length = 263
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----------------EPIRIERAF 54
C ++ ++ + + + P+ AI+VL G + R+ A
Sbjct: 51 CSNAWVAKYLVRSLEWQNLPMAQLPNAEAIIVLGGATKSVFPPRITPDLSEQGDRVIYAA 110
Query: 55 ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+L I +SG S+ + I + + +LNT NA
Sbjct: 111 QLYRQNKAPLIILSGGRIDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVN 170
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHDLEENSSIFKIK 167
VL+VT HMPR+ QR V P + + +L+E + K
Sbjct: 171 VKKILVSRGIDQVLLVTSALHMPRSLKIFQRQGMNVIPAPTDFLVSEGELQELGNTPKAA 230
Query: 168 ILRVL------------LIEYLKILLLSIQ 185
IL +L L EY+ + ++
Sbjct: 231 ILNLLPDTYNLHLFTNALKEYVGSFVYWLR 260
>gi|193212745|ref|YP_001998698.1| hypothetical protein Cpar_1090 [Chlorobaculum parvum NCIB 8327]
gi|193086222|gb|ACF11498.1| protein of unknown function DUF218 [Chlorobaculum parvum NCIB 8327]
Length = 196
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 12/190 (6%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQI 61
++ + L + + F+ + IVVL G+ R+E+ EL +
Sbjct: 9 LLFFLITSTLFATVYLGLGFLVSLHSTKPE---KADVIVVLGGDNGLRVEKGTELYKAGY 65
Query: 62 GEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ I ++G+ S S+ ++ + + + I + + T A+ S +K
Sbjct: 66 AKNIVLTGIDSRYYSPSRPNWRERRMLEAGVPKKAITVDIWSETTWEEAENTSDLMDKKG 125
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS--SIFKIKILRVLLIEY 176
++ L+V+ HM R + + + + + + ++ E
Sbjct: 126 WNSALVVSDPPHMLRLHKTWTQAFAGSSKQFILVTTEPEWWHPLFWWRDPFSKQFVINEI 185
Query: 177 LK---ILLLS 183
K LL
Sbjct: 186 KKNIYYLLAY 195
>gi|258591830|emb|CBE68131.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 232
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 68/204 (33%), Gaps = 18/204 (8%)
Query: 1 MRYFWYGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTG--EPIRIERAFELL 57
+R+ + L+ ++ F+ + AI VL G R A L
Sbjct: 6 IRWLIVFPLLGLLLYVGHPFLLRAMGRYLITEDRLQKAEAIAVLAGDGGVGRTLEAVRLY 65
Query: 58 ENQIGEKIFI------SGVHHSVSKDILLQK--------IPIRQDLAECCIDIGYKALNT 103
++ +I + +G I + + + + + + ++ +T
Sbjct: 66 QDGYAPRIILTRQRLPTGYEALTRLGITVPEERHIQWMVLKAMRVPVTAVLQVNERSDST 125
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISHDLEENSS 162
+++ +++VT+ H R L R++ + I P + +
Sbjct: 126 ASEMVHLVRLLKEHRIRTIILVTNKSHSTRASKILARVSRNNLTSISRPTRYDTFDPDGW 185
Query: 163 IFKIKILRVLLIEYLKILLLSIQL 186
R +L EYLK+L +Q
Sbjct: 186 WRSRADARDVLFEYLKLLDYLVQT 209
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 9/166 (5%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP--SVSAIVVLTGEP--IRIERAFELL 57
R + + + + + + P+ P V AIVVL G R+ A L
Sbjct: 5 RQRFLLAAALAVMTTATALLWGGRIIYSNAPEDPLRPVDAIVVL-GGENDGRVPYAVSLA 63
Query: 58 ENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
E + ++ IS H + C+ + A T G AQ A +N
Sbjct: 64 EQGLARQVVISNPHDARDPSTNEGCATTDPRFTVTCV-APHPAT-TRGEAQFTRTLAVQN 121
Query: 118 NFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-SHDLEENSS 162
+ VL+V+ YH+PR QR + + S+D
Sbjct: 122 GWTSVLVVSWRYHLPRARYIFQRCFDG-DLTMHAVPRSYDFSLAKW 166
>gi|289450181|ref|YP_003474931.1| hypothetical protein HMPREF0868_0608 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184728|gb|ADC91153.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 231
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 7 GLFVCLIFFIMG-FISFIRYVKQMHIPDH-PSVSAIVVLTGEP-----------IRIERA 53
GL +CL+F + ++ +Q+ D P I+VL G R+E A
Sbjct: 39 GLVLCLLFLAVPLWMGLAVKGRQISNADDIPKAECIMVL-GARVYKDRPSHMLEGRLEAA 97
Query: 54 FELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG---NAQ 108
L Q +I +SG D ++++ I + + I + + +NT NA
Sbjct: 98 ISLYFKQKAPQILVSGGGAGTDFDEAIVMRRYLISRGVPAESIIMDHAGINTYQSCYNAT 157
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
K + +LI T +YHM R+ ++ P
Sbjct: 158 F------KFGYKKILIATTEYHMQRSLFLATKLGLDCYGYASP 194
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIRASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|313672214|ref|YP_004050325.1| hypothetical protein Calni_0249 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938970|gb|ADR18162.1| protein of unknown function DUF218 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 29/209 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIRYVKQMHIPDHPSVSAIVVLTGE-----------PI 48
RY + V L F + + I +++ +I IVVL G
Sbjct: 34 RYLLFFFAVMLYLFSISPVKDILIYPIEKDYINLKCDGDIIVVLGGGVYGNGELSEDAFK 93
Query: 49 RIERAFELLENQIG--EKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ + FE G + I +SG S S + +++ + + + E I + + +T
Sbjct: 94 RVVKGFE---KGRGGDKIIIVSGGRVSESYPYEAEVMKDLLVTLGIREGNIIMDKDSKDT 150
Query: 104 EGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINST------VQFIPYPIISHD 156
NA+ E+ V+++T YHM R L ++ F + S
Sbjct: 151 VENAKFTKKIVEEKGIKGDVILITSAYHMKRGILIFKKYGFDNICAAATDFKFDGVYSI- 209
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ S + + L EYL IL I+
Sbjct: 210 YDFLPSASNLNTVSKALKEYLGILFYRIK 238
>gi|119356675|ref|YP_911319.1| hypothetical protein Cpha266_0844 [Chlorobium phaeobacteroides DSM
266]
gi|119354024|gb|ABL64895.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 219
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 7/186 (3%)
Query: 6 YGLFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGE 63
LFV G F + Y+ ++ I+VL G+ R+++ EL +
Sbjct: 31 ISLFVLTACTSAGIFFISLGYLVSLYAEKPKPADVIIVLGGDNGLRVKKGAELYNDGYAP 90
Query: 64 KIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ ++G+ S ++ + + I I ++ ++ A +S EK +
Sbjct: 91 RVILTGIDARFYRPSHPDWRERRMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWK 150
Query: 121 HVLIVTHDYHMPRTFLELQRINST--VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
++V+ H+ R ++ S QFI P K ++ E+ K
Sbjct: 151 TAIVVSDPPHLFRLHRTWKKAFSGSAKQFILVPTKPQWWNPLLWWKNKKSYSFVISEFQK 210
Query: 179 ILLLSI 184
L S+
Sbjct: 211 SLYYSV 216
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R+ EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRS--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|149915963|ref|ZP_01904486.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
gi|149810037|gb|EDM69885.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
Length = 266
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%)
Query: 4 FWYGLFVCLIFFIMGFI----SFIRYVKQMHI--PDHPSVSAIVVLTGEPI--------- 48
FW + + F+ GF+ +R ++Q + PD + I+VL G
Sbjct: 44 FWVNGTLLFVLFM-GFVPLGQLIMRPLEQRYPSAPDIAPPAGIIVLGGGEDGAMSAASGL 102
Query: 49 --------RIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCID 95
R+ L K+ +G VS I+ + + I
Sbjct: 103 PETNGAGDRMSAGVALALAYPDAKLIFTGGSGQFLAGGVSGAIVAKAYFESLGVDPERII 162
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ +A NT NA + + ++VT +HMPR+ P+P+
Sbjct: 163 LEGRARNTAENAAFSRELVDDPRIGPWVLVTSAFHMPRSLATFCAAG-WRDITPFPVDYR 221
Query: 156 DLEENSSIFKIKI----LRVLLIEYLKILLLS 183
+ + + L + + E++ +L
Sbjct: 222 SITDLEFKWDPTGNFEKLNLSIKEWIGLLAYE 253
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 73/219 (33%), Gaps = 39/219 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------------PIRI 50
L VC ++ + + + P+ AIVVL G R+
Sbjct: 47 LLLVCSNAWVAKSLVRSLEWQYLPPNPVPNAEAIVVLGGATKSAYPPRPTVDLSETGDRV 106
Query: 51 ERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
A +L I +SG S+ + + + I +LNT
Sbjct: 107 IYAAQLYRQNKAPIIILSGGRIDWRGGGESESADMANVLTSIGIPSEVIVQEPDSLNTYQ 166
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENS 161
NA E VL+VT HMPR+ QR + I P + +L+E S
Sbjct: 167 NAVNVKKILESRGIGKVLLVTSAMHMPRSIQIFQR--QGINAIAAPTDFLVSQGELQELS 224
Query: 162 SIFKIKILRVL------------LIEYLKILLLSIQLSL 188
S K IL +L L EY+ + S + L
Sbjct: 225 STPKAAILNLLPDSNNLQQFTSALKEYIGSFVYSWRGWL 263
>gi|153009344|ref|YP_001370559.1| hypothetical protein Oant_2014 [Ochrobactrum anthropi ATCC 49188]
gi|151561232|gb|ABS14730.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 235
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 68/214 (31%), Gaps = 37/214 (17%)
Query: 6 YGLFVCLIFFIM----GFISFIRYVKQMHIPD--HPSVSAIVVLTG-------------- 45
GL + ++FF G + + PD V IVVL G
Sbjct: 13 LGLSIAILFFAAFTTLGSVLLAPLEDRFAKPDAMPQHVDGIVVLGGYMNGDINAGRKGFE 72
Query: 46 ---EPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIG 97
RI A L ++ +SG + + +++ I +
Sbjct: 73 LNSAADRIFEAMRLARLYPDARVIVSGGDGAFFEEAAKEADSTRQMLIDLGFSGERYIYE 132
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
K+ NT NA + A+ L+VT YHMPR+ ++ + +P+
Sbjct: 133 NKSRNTVENAIFSKELAQPKPGETWLLVTSAYHMPRSVGCFRKA--DFDVVAWPVDYKTR 190
Query: 158 EENSSIFKIKI-------LRVLLIEYLKILLLSI 184
++ V + E++ + +
Sbjct: 191 ARERFALYLESPNEALSRFSVAMREWVGLAAYWL 224
>gi|229824827|ref|ZP_04450896.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
gi|229790830|gb|EEP26944.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
Length = 211
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 31 IPDHPSVSAIVVLTGEPIRI--ERAFELLENQIGEKIFISG---------VHHSVS---- 75
I D P S I+ + G + E A L + KI SG ++ V+
Sbjct: 23 IEDEPQDSDIIFIPGSSNWVLAETAASLYKEGKANKIMPSGMYFYKIGRFLNERVTDERY 82
Query: 76 ------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF--HHVLIVTH 127
+ L + ++ + I I KA NT NA + ++NN +I
Sbjct: 83 KGNFRTEAEFLSSVLVKNGVENKDILIEEKATNTYENAIFSRDLLKENNLTVKKAIICPQ 142
Query: 128 DYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+H R F+ + V+F P + + +S + ++V+L E K
Sbjct: 143 AFHARRAFMTYSHLFPDVEFYVVPTDTQGITADSWYKTERGIQVVLGELQK 193
>gi|319638788|ref|ZP_07993547.1| periplasmic protein [Neisseria mucosa C102]
gi|317400029|gb|EFV80691.1| periplasmic protein [Neisseria mucosa C102]
Length = 218
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLSGTWQIYRTGLQTLPKDVHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|239617397|ref|YP_002940719.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
gi|239506228|gb|ACR79715.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
Length = 254
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP----SVSAIVVLTGEP----------- 47
GLF L+ +G +++ ++ + + + AIVVL G
Sbjct: 45 ILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLLDTAEAIVVLGGGMIIAPYELEPGD 104
Query: 48 ---IRIERAFELLENQIGEKIFISGVHH----SVSKDILLQKIPIRQDLAECCIDIGYKA 100
R+ +AF++ G+ I ++G S+S+ ++ + + E + + A
Sbjct: 105 HTLKRLYKAFQI-HRATGKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVENSA 163
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
NT NA + ++ + +++VT HM R+ + V IPYP
Sbjct: 164 RNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNV--IPYP 212
>gi|313897329|ref|ZP_07830872.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312957699|gb|EFR39324.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 192
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R++ A L + + I ISG V ++ ++ ++ IR + + + +A NT N
Sbjct: 57 RMDAAITLYKEKRVRCILISGGSVRNTYTEADIMAAYAIRCSIPSTALLLERQAKNTYEN 116
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A + + + HV++VT +H+ R
Sbjct: 117 LLYAKTLCDAHAWKHVIVVTSCFHVRRA 144
>gi|315634101|ref|ZP_07889390.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477351|gb|EFU68094.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 247
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 34/144 (23%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLNDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS + L + + K+L T+ NA EK H
Sbjct: 125 SGVSPTGASEGKVSAEELQTFFNVPTKW------LEEKSLTTKENALYTRQLLEKEGIHK 178
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+++HM R L Q+ V
Sbjct: 179 IILVTNEWHMQRAKLLFQQQGFDV 202
>gi|300703293|ref|YP_003744895.1| hypothetical protein RCFBP_10965 [Ralstonia solanacearum CFBP2957]
gi|299070956|emb|CBJ42264.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CFBP2957]
Length = 190
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVASRVFVSGEGDCLLIVRRLVMAGVPAGRIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ NT NA+ + ++VT YH R +R+ V + +
Sbjct: 105 ------ESGNTMENARMTRRMLDGQPVRSAVLVTSWYHTGRALHAFRRVWPEVAWRARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EYLK +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYLKRAWYAVR 189
>gi|299135177|ref|ZP_07028368.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298590154|gb|EFI50358.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 264
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 37/182 (20%)
Query: 35 PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGV-----HH 72
+ I+VL G R+ A L KI +SG H
Sbjct: 77 RAPDGIIVLGGAINPDLTAVRGAPEMNSSAERMTAAAVLARRFPNAKIVLSGGNANPFHP 136
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
++ + +K +A+ I + ++ T NA+ +L+VT YHMP
Sbjct: 137 LSTEAEVGRKFLEDLGVADDRIVMEGRSRTTYENAEFTRPLIHPVAGERLLLVTSAYHMP 196
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSI--------FKIKILRV--LLIEYLKILLL 182
R + V+ YP+ D + + R+ + E++ ++
Sbjct: 197 RAMGVFRAAGFNVE--AYPV---DWRTRGWVDAERPFLTLSGGLGRLDTAVHEWVGLIGY 251
Query: 183 SI 184
+
Sbjct: 252 RL 253
>gi|255513632|gb|EET89897.1| protein of unknown function DUF218 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 295
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 50 IERAFELLENQIGEKIFISGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
+E A LL+ + I SG +++ +++ + + ++++
Sbjct: 97 VEHAVLLLKEGRAKAILFSGGWSFKHRRKPRLTESEGMRRYAVSLGAPASALITEKRSMD 156
Query: 103 TEGNAQEASAWAEK-NNFHHVLIVTHDYHMPRTFLELQRIN 142
T GNA +S K +L+V YHMPR ++
Sbjct: 157 TIGNALYSSKIIRKMRGTKRILLVAVAYHMPRASYIFRKAL 197
>gi|294627587|ref|ZP_06706170.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667213|ref|ZP_06732434.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598218|gb|EFF42372.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602994|gb|EFF46424.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + G+I ++ Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAGWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N ++A
Sbjct: 57 AQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGLHRAIIVSDPLHMARAL 137
>gi|225076794|ref|ZP_03719993.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
gi|224951892|gb|EEG33101.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
Length = 218
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLTGTWQIYRTGLQTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGGTPKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N N +++V+ YH+ R
Sbjct: 133 NMLNIVPIMHANGVGSIIVVSDPYHLARA 161
>gi|148255961|ref|YP_001240546.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
gi|146408134|gb|ABQ36640.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
Length = 262
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 28/184 (15%)
Query: 32 PDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG----- 69
P + I+VL G R+ +A L +I +G
Sbjct: 74 PAKGAPDGIIVLGGPVDPDLSIMYGMPVTVAGADRLIQAAALARRYPNARIVFTGGSANL 133
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + I + +A+ + + ++ NT NA + A L+VT +
Sbjct: 134 ISTDAREADVAADILLSLGVAKERLTLERESRNTYENAVFSKAMVAPKPGERWLLVTSAF 193
Query: 130 HMPRTFLELQRINSTVQFIPYPI---ISHDLEENS-SIFKIKILRVLLIEYLKILLLSIQ 185
HMPR+ ++ V+ PYP+ + L+ + S+ ++ + + E++ ++ ++
Sbjct: 194 HMPRSVGLFRKAGFPVE--PYPVDWRVGRVLDVDGVSLLGLRRADIAVREWVGLVAYRLR 251
Query: 186 LSLS 189
+
Sbjct: 252 GRID 255
>gi|209884886|ref|YP_002288743.1| hypothetical protein OCAR_5752 [Oligotropha carboxidovorans OM5]
gi|209873082|gb|ACI92878.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 264
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 34/208 (16%)
Query: 11 CLIFFIMGFI----SFIRYVKQMHIP---DHPSVSAIVVLTG-----------------E 46
+ + GF + + + D + IVVL G
Sbjct: 46 IALLLVCGFSPLGNWLLLPLSERFPAWHDDGRAPDGIVVLGGAISPDLTAERGTAELNAS 105
Query: 47 PIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ A EL KI +SG H ++ + + + +A I ++
Sbjct: 106 AERMTAAAELARRFPNAKIVLSGGNANVFHPLSTEAEVGRVLLENLGVAADRIVREDRSR 165
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NT NA + L+VT YHMPR + N V+ P + +E
Sbjct: 166 NTYENAIFTRDVVKPKPGERWLLVTSAYHMPRAIGVFRAANFPVEAYPIDWRTSGWKEAG 225
Query: 162 SIF---KIKILRV--LLIEYLKILLLSI 184
F + R+ E++ ++ +
Sbjct: 226 RPFLKLSAGLARLDTAAREWVGLIGYRL 253
>gi|146279502|ref|YP_001169660.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145557743|gb|ABP72355.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 187
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 53 AFELLENQIGEKIFISGVHHSVSKD---ILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
A L ++ + K+ ISG +V + + +AE + + A NT NA
Sbjct: 40 AIALYKSGLTPKLLISGAGVAVDGSTEWSFYRDHALDAGVAESALLLEKAARNTAENAAF 99
Query: 110 ASAWAEKN----NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIPYPIISH-DLEENSSI 163
+A EK + + +HM R + L+R V+ + P DL +
Sbjct: 100 GAAVIEKELGWAKVRSLAVCAKPFHMRRAIMTLRRHVPADVRLVAQPPDDPGDLSAETWW 159
Query: 164 FKIKILRVLLIEYLKILLLSIQ 185
+ + E KI +++
Sbjct: 160 QTAPGRQRIFAELGKISEYALK 181
>gi|254412764|ref|ZP_05026537.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180499|gb|EDX75490.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 263
Score = 69.9 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 72/227 (31%), Gaps = 50/227 (22%)
Query: 6 YGLFVCLIF---FIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------------- 46
GL + L+ ++ + + + + P AIV+L G
Sbjct: 43 LGLIILLVASNGWVANSMVQSLEWQHIPPTELPQAEAIVILGGATRSAIPPRPAPDLNEA 102
Query: 47 PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQDLAECCIDIG 97
R+ +L + I SG S +L+ I + I
Sbjct: 103 GDRVFYGAQLYQQGKAPVIIASGGRIEWRGGGSPESADMAQILEMIGVPPSA----ILQD 158
Query: 98 YKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----II 153
+LNT NA ++ VL+VT H PR QR ++ IP P +
Sbjct: 159 PASLNTHQNAVNVRRILQQEGIKKVLLVTSAMHTPRALRVFQR--QGIEAIPAPTDFLVT 216
Query: 154 SHDLEENSS------------IFKIKILRVLLIEYLKILLLSIQLSL 188
+L E +S + + + EY+ + ++ L
Sbjct: 217 QQELNEPNSSLAAILLNGLPDAQNLDMTTRAIKEYIGTAVYWLRGWL 263
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
L + +G + + V S AI VL G+P R + A EL + I++
Sbjct: 4 LIPITLLLSLGVVWGLNRVA----VAQRSPQAIFVLGGDPQREQFAAELAQTHPDLPIWV 59
Query: 68 S-GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S G + + + + + + + Y+A +T N + ++ HV +VT
Sbjct: 60 SSGSNP-----EYAEWVFGQAGVPRSRLHLDYQATDTLSNFTSLADRFQQQGIQHVYLVT 114
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFK 165
DYHM R + + + + F P P+ + S K
Sbjct: 115 SDYHMRRALVIANIVFASRGITFEPVPVPFD--RASESWRK 153
>gi|192291940|ref|YP_001992545.1| hypothetical protein Rpal_3570 [Rhodopseudomonas palustris TIE-1]
gi|192285689|gb|ACF02070.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 264
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 31/181 (17%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ I+VL G R+ A +L +I SG +
Sbjct: 75 AGRAPDGIIVLGGAIDSELSVARNTLEVDASAERVLAALDLARRYPKARIVYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
SV++ L ++ R LA + + K+ T NA A L+VT +H
Sbjct: 135 QRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVVPKPGELWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILR--VLLIEYLKILLLS 183
MPR+ + + V +PYP+ S D S + R V + E+ +L
Sbjct: 195 MPRSIIAFRAAGFDV--VPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 184 I 184
+
Sbjct: 253 L 253
>gi|167629577|ref|YP_001680076.1| hypothetical protein HM1_1492 [Heliobacterium modesticaldum Ice1]
gi|167592317|gb|ABZ84065.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 252
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 32/184 (17%)
Query: 31 IPDHPSVSAIVVLTGEPIRIER----AFELLENQIGEKIF-------ISGVHHSVSKDIL 79
PD PS I++L G ++ + ++ ++G VS +
Sbjct: 72 PPDKPSGDVIIMLGGGAT-MDTPDIDGLGQMTGGSANRLLTAARLHQLTGAPIIVSAGQV 130
Query: 80 LQKIPIRQDL----------AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + E I + + NTE NA+ + FH ++VT +
Sbjct: 131 FENSGNESRIAFRQLTGLGVPESMIIVEEMSRNTEENARYTKEILDARGFHKPILVTSAF 190
Query: 130 HMPRTFLELQRINSTVQFIPYP----IISHDL----EENSSIFKIKILRVLLIEYLKILL 181
HM R+ ++ V +P+P + + S + + + EYL ++
Sbjct: 191 HMERSVGHFSKL--GVSTLPFPTDYRVNRQARYSLNDWAPSAVAMSNASLAMKEYLGLIP 248
Query: 182 LSIQ 185
L ++
Sbjct: 249 LWLK 252
>gi|39936223|ref|NP_948499.1| hypothetical protein RPA3160 [Rhodopseudomonas palustris CGA009]
gi|39650078|emb|CAE28601.1| DUF218 [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 64/181 (35%), Gaps = 31/181 (17%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ I+VL G R+ A +L +I SG +
Sbjct: 75 AGRAPDGIIVLGGAIASELSAARNALEVDASAERVLAALDLARRYPKARIVYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
SV++ L ++ R LA + + K+ T NA A L+VT +H
Sbjct: 135 QRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVAPKPGELWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPII-----SHDLEENSSIFKIKILR--VLLIEYLKILLLS 183
MPR+ + + V +PYP+ S D S + R V + E+ +L
Sbjct: 195 MPRSIIAFRAAGFDV--VPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAYR 252
Query: 184 I 184
+
Sbjct: 253 L 253
>gi|299065943|emb|CBJ37124.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CMR15]
Length = 180
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 13/154 (8%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAE 91
IVVL GE R+ A EL + ++F+SG V + + +P + E
Sbjct: 35 RADVIVVLGGESGQRVIGAAELYHAGVAPRMFVSGGGDCLLIVRRLE-MAGVPAERIGHE 93
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
C ++ +T NA+ ++VT YH R +R+ V +
Sbjct: 94 C------ESGSTMENARMTRRTLAGQPVRSAVLVTSWYHTGRALNVFRRVWPEVAWGARG 147
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ D S +L EY+K +++
Sbjct: 148 VFPGDTFAKSFPIYESGS--ILAEYIKRTWYAVR 179
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K +++ L + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|74316470|ref|YP_314210.1| transmembrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055965|gb|AAZ96405.1| probable transmembrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 251
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 30/208 (14%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------------IR 49
L+ ++ G + + P AIVVL+G R
Sbjct: 48 ALYALSTPWVGGLLLKSLEISVPVDPARLQADAIVVLSGGRRMASREYGGDTLNGISLER 107
Query: 50 IERAFELLENQIGEKIFISGVHHS----VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
+ A L G + ++G + IL Q + + + AL T
Sbjct: 108 LRYAVRL-HRATGLPLLVTGGNPGGGTLAEGQILAQVLRDDYGIEPRWV--EDAALTTWD 164
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTF-----LELQRINSTVQFIPYPIISHDLEEN 160
NA+ ++ +K+ H + +VTH +H+ R EL+ I + +QF + L+
Sbjct: 165 NARLSAPLLKKSGVHRIALVTHAWHLRRAVPLFEAQELEVIPAGIQFASTDLDRI-LDLL 223
Query: 161 SSIFKIKILRVLLIEYLKILLLSIQLSL 188
+ ++ L E+L IL ++ +
Sbjct: 224 PTPAGLRDSSFALHEWLGILWYKLRSNF 251
>gi|325267121|ref|ZP_08133790.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
gi|324981474|gb|EGC17117.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
Length = 213
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 17/149 (11%)
Query: 33 DHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHS---VSKDI 78
D P A VVL G RI A L + K+ +G ++
Sbjct: 42 DLPQADAAVVL-GAAAWGNRPSPVFRERINHALTLYQTGYVRKLIFTGGTPKSGYETEAE 100
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + ++Q + E I I ++ +T N +K++ H ++I++ H+ R
Sbjct: 101 VARNFALKQGIPEQDILIEMRSKDTYQNLVNTRFLMQKHHLHDIVIISDPLHIARAMAIA 160
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ ++ + P P + S +
Sbjct: 161 EDLDIKANYSPTP--TSRYHNASWQTQAA 187
>gi|148658348|ref|YP_001278553.1| hypothetical protein RoseRS_4260 [Roseiflexus sp. RS-1]
gi|148570458|gb|ABQ92603.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 193
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 8/162 (4%)
Query: 36 SVSAIVVLTGE---PIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQ 87
+ AIVVL GE P R A L + Q + +G +S + + + +
Sbjct: 30 TADAIVVLGGEAYPPNRTIHALNLYKQQRAPVVVFTGGALPGQPPEISSARVALRYALAR 89
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
L + A +T A A + + ++IVT YH R + I VQ
Sbjct: 90 GLPAEVALVVDTAQSTYDEATLVRDLAAHHGWRSLIIVTDPYHTRRAVRTFRSIIPDVQV 149
Query: 148 IPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
D + +++ R E +K+ + +
Sbjct: 150 TASVAPFLDTFADPLSRGVRVWRYAAAELIKMAFYRLHYGIP 191
>gi|166714094|ref|ZP_02245301.1| hypothetical protein Xoryp_22305 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 205
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W LI+ + G+I +I Q I+VL RI
Sbjct: 17 WGWRLCMPALIWLVAVTGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L ++ +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
++A E++ H +IV+ HM R
Sbjct: 132 EQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|84621867|ref|YP_449239.1| hypothetical protein XOO_0210 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574494|ref|YP_001911423.1| hypothetical protein PXO_03633 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424447|gb|AAW73484.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365807|dbj|BAE66965.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188518946|gb|ACD56891.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 205
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 20/150 (13%)
Query: 1 MRYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------I 48
+ + W LI+ + G+I +I Q I+VL
Sbjct: 15 LGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEE 69
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L ++ +G ++ + ++ +R + I I + T
Sbjct: 70 RIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQ 129
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
N ++A E++ H +IV+ HM R
Sbjct: 130 NLEQARTLMERHGMHRAIIVSDPLHMARAL 159
>gi|282900121|ref|ZP_06308078.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281195003|gb|EFA69943.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 263
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 78/226 (34%), Gaps = 44/226 (19%)
Query: 5 WYGLFVCLIFFIM-GFI----SFIRYVKQMHIPDHPSVSAIVVLTG-------------- 45
W G+ + ++ G++ + + + P AIVVL G
Sbjct: 40 WIGISLAILIISGNGWVSKSLVASLEWQNIPLEKIPQAEAIVVLGGATKPAAWPRSTVDL 99
Query: 46 --EPIRIERAFELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ A +L + I +SG + + I I + I
Sbjct: 100 NESGDRVIYAAQLYGQKKAPLIILSGGRIDWRGGGTPESADMATILISLGIPPEVIIEEP 159
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IIS 154
+LNT NA E VL+VT H PR+ QR V+ IP P +
Sbjct: 160 NSLNTYENAVNVKKILESRGIKKVLLVTSAMHTPRSLKIFQR--QGVEVIPAPTDFIVSR 217
Query: 155 HDLEENSSIFKIKILRV------------LLIEYLKILLLSIQLSL 188
DLEE + K IL + L EY+ L+ +++ L
Sbjct: 218 SDLEELIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRGWL 263
>gi|260881233|ref|ZP_05403953.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849348|gb|EEX69355.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 266
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 29/176 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVLTGEP--------- 47
R + F+++ P+ P+ I++L G
Sbjct: 51 RAAAVLFALTFAFYLLCTGLVAEKTMGWLESAYQPPERPAGDVIIMLGGGAYSDTPDVDG 110
Query: 48 ---------IRIERAFELLENQIGEKIFISG--VHHSVS-KDILLQKIPIRQDLAECCID 95
R+ A L + SG V+ + + +++ + + E I
Sbjct: 111 TGTLCASPASRLLTAVRLQRQLDVPILL-SGGQVYEDTGAEAKIAKRVLMSLGVPEDKIL 169
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+++NT NA+ ++ +N H ++VT +HM R+ L + V P+P
Sbjct: 170 TETRSINTSQNARFSAEILRENGLSHPILVTSAFHMKRSVLNFAK--QGVAVEPFP 223
>gi|227824083|ref|YP_002828056.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343085|gb|ACP27303.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 261
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 30/175 (17%)
Query: 5 WYGLFVCLIFFIMG------FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ L + ++F + F+ + P ++ I+VL G
Sbjct: 40 FASLGLIVLFLSLFTTTGPYFLQMLEDRFPRPSPPPAEIACIIVLGGAFENVVIASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVH---HSVSKDILLQKIPIRQD--LAECCIDI 96
R A L + +I +SG + + +
Sbjct: 100 EFNQAADRFVEAVRLAKAYPAARILVSGGDGSISGAYEGDARASQGFFNAFGIGADRVIR 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ T NA+ N +VT YHMPR+ + + + +P+P
Sbjct: 160 EEDSRTTFENARYTKDLLAANGLERCALVTSAYHMPRSVGLFRA--NGIAVVPWP 212
>gi|332975337|gb|EGK12233.1| hypothetical protein HMPREF9373_1599 [Psychrobacter sp. 1501(2011)]
Length = 260
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 20/154 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHP--SVSAIVVLTGE----------P 47
+R W L+ +++ F+ F + + P+ P V AI++L G
Sbjct: 63 LRKIWKTLWAGFGIWLVSFLVFAFTLHSHVRQPNEPFEKVDAIIILGGGIQDGLPTPTLA 122
Query: 48 IRIERAFELLENQIGEKIFISG-VHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNT 103
R++ A L+ Q + SG V ++ + Q + + I K+ +T
Sbjct: 123 SRLDTAVPLIREQPEAIVITSGGVGIGETRSEGEAMAQYLHALYGIPLDDIYQEKKSTST 182
Query: 104 EGNAQEASAWAEKNNF---HHVLIVTHDYHMPRT 134
E N + N + IVT D+HMPR+
Sbjct: 183 EENFLFSQKILTDKNISLKDPIAIVTSDFHMPRS 216
>gi|160941542|ref|ZP_02088874.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
gi|158435507|gb|EDP13274.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
Length = 238
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 26/188 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI---- 48
GL CL F++ + + D + I+VL G P
Sbjct: 14 LLVLGLAGCLFLFLINLYMIRKEKPNIISSDDAAALGDVDCIMVLGCSVRPDGTPSGMLR 73
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEG 105
R+++ EL E+ + +++ +SG H + D + +++ I + + I + + +T
Sbjct: 74 DRLDKGIELYEDGVSDRLLMSGDHGRKNYDEVNRMKQYAIDEGIPSGDIFMDHAGFSTYE 133
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + ++IVT YHM R + + Y + S + K
Sbjct: 134 SMYRARDIFQ---VKKIIIVTQRYHMYRAL----YVAQAMGMEAYGVESDPRQYGG--QK 184
Query: 166 IKILRVLL 173
++ LR LL
Sbjct: 185 MRDLRELL 192
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 35/196 (17%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA--------IVVLTGEP-------------- 47
+ +F+++ + + P S +A I++L G
Sbjct: 1 MIALFWLLAAGWLTAPLLDLAQPQRQSAAAATFAPRTAIILLGGGTIYDDDNVLVPPHDV 60
Query: 48 -IRIERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYK 99
RIE + ++ +SG + S ++ +RQ +A I +
Sbjct: 61 LSRIEVSARNYAACKRTANICQVIVSGGNPQRHSATEADTYLPYLLRQQVARSDIVLEKT 120
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
+ T NA+ SA ++++ +++VT YHMPR L+ Q P P IS
Sbjct: 121 SRTTYENARNVSAIVGQSHYDTLILVTSAYHMPRALLDFQCFG----VEPQPQISSARRA 176
Query: 160 NSSIFKIKILRVLLIE 175
+ + +L E
Sbjct: 177 RLGVL-PRFENLLAAE 191
>gi|144900194|emb|CAM77058.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 167
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ A L+ + + +SG V+H + ++++ + + + I + ++ NT
Sbjct: 30 ARRVAHAATLVHSGRVAHLLMSGGAVNHPTPEALVMRDLAMAAGIDADRIVVEDQSRNTI 89
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
GNA+ + + +L+VT +H+PR L R V
Sbjct: 90 GNARYCAPIIVAQGWTRLLLVTDSFHLPRARLIFARHGLKVAL 132
>gi|86355763|ref|YP_467655.1| hypothetical protein RHE_CH00103 [Rhizobium etli CFN 42]
gi|86279865|gb|ABC88928.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 262
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 24/157 (15%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHHSVSK---------DILLQKIPIRQD-LAECCI 94
G R A L + +I ISG S+S + I +D L E
Sbjct: 103 GGADRFIEALRLAQKFPQSRILISGGDGSISGIYEGDAAASERFFPLFGIGKDRLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP--- 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ERQSRTTFENAVNTREFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWPTDY 215
Query: 152 ----IISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
+ L+ + + + E+ ++ +
Sbjct: 216 RTDGQVRPGLDFTQPNLNAQSMATAIREWYGLIGYYL 252
>gi|46202066|ref|ZP_00208367.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E L + + +SG V H+ + +++ + ++ L + + + NT
Sbjct: 31 ARRVELGVRLARDGKVAHLLMSGGAVRHTTPEAHVMRAMALQSGLDPDRLHVEDASRNTI 90
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF-IPYPIISHDLEENSSI 163
GNA + E + +LI+T HM R R+ + +P + E +
Sbjct: 91 GNALMSRPMIEARGWTRLLIITDACHMARALYIFHRLGLKARPAAAWPETNPGPEWYMAW 150
Query: 164 FK 165
+
Sbjct: 151 LR 152
>gi|21229858|ref|NP_635775.1| hypothetical protein XCC0380 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766735|ref|YP_241497.1| hypothetical protein XC_0392 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989803|ref|YP_001901813.1| hypothetical protein xccb100_0407 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111359|gb|AAM39699.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572067|gb|AAY47477.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731563|emb|CAP49738.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 205
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 20/148 (13%)
Query: 3 YFWYGLFVCLIFFI--MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRI 50
+ W + LI+ + G+I ++ Q I+VL RI
Sbjct: 17 WGWRLCMLALIWLVGVAGWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERI 71
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A +L + +G ++ + ++ +R + I I + T N
Sbjct: 72 RHALDLYARGYAPHLLFTGGFGNGARFAESQVARRYALRHGVPSEAIVIETSSRTTRQNL 131
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+A A E++ H +IV+ HM R
Sbjct: 132 LQARALMERHGMHRAIIVSDPLHMARAL 159
>gi|124007832|ref|ZP_01692534.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123986778|gb|EAY26559.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 256
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKDI----LLQKIPIRQDLAECCI 94
V L RI +A L +KI ISG + LL+++ ++ + I
Sbjct: 96 VYLDKGGDRITQALMLYRVGKIKKILISGGSFDPKQRLERAEAYLLKQVLLQAKVPSHDI 155
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I KA NT NA + K L++T +H+ R ++ ++ P+ +
Sbjct: 156 IIETKARNTRENALNTAKILNKQFPRQSYLLITSAFHIRRAVGCFRQA--GIRVTPFSVD 213
Query: 154 SHDLEEN--------SSIFKIKILRVLLIEYLKILLLSI 184
+ +++ + + VL E + ++ +
Sbjct: 214 FYTIDKGFTFPFSLFPAEKALYKWYVLSHEVIGYIVYKV 252
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 2 RYFWYGLFVCLIFFIM----GFISFIR---YVKQMHIPDHPSVSAIVVLTGE-------- 46
R W + I F + F+ F+ Y+K+ +IPD + IV+L G
Sbjct: 34 RQIWRFFLILSIVFYLISSPFFVYFLSKSFYIKEKNIPDSQNS-VIVILGGGITFFDGKY 92
Query: 47 ------PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ + FE+ I ISG + +S+ +++ I + + I +
Sbjct: 93 EVGNHTLKRLLKGFEIYRKTNAP-IIISGGVIGKGISESAIMKDILVTFGVNINDIIVED 151
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPII- 153
KA T+ NA S + NF ++++VT HM R+ + ++ + IP YPI
Sbjct: 152 KARTTKENAIFVSKLLKGKNFENIILVTSFLHMKRSIMLFEKYSKK-NIIPIVCDYPIDF 210
Query: 154 -SHDLEENSSIFKIKILRVLLIEYLKIL 180
+ L+ S + + E+ IL
Sbjct: 211 RNSFLDYLPSAEALYTFSQITHEFFGIL 238
>gi|302039339|ref|YP_003799661.1| hypothetical protein NIDE4067 [Candidatus Nitrospira defluvii]
gi|300607403|emb|CBK43736.1| conserved protein of unknown function DUF218 [Candidatus Nitrospira
defluvii]
Length = 270
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 25/154 (16%)
Query: 31 IPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHS 73
A+VVL G R +L + + K+ ++G +
Sbjct: 83 PASASKFDAVVVLAGGVFQKGSLRPADEVSDASRQRTSCGTDLWKQNLAPKLLLTGGDAT 142
Query: 74 VSKDILL-----QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L+ ++ IR + E I ++ T NA + + +L+VT
Sbjct: 143 VFRTGLMESHEMKRWAIRLGVPESAILTEEQSRTTYENAVQTKSML---GSGRILLVTAA 199
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
YH+PR ++ V P S + +
Sbjct: 200 YHLPRAVRLFEKQGFVVTPFPCGFESQHTPQQAW 233
>gi|78045951|ref|YP_362126.1| hypothetical protein XCV0395 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929410|ref|ZP_08190538.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
gi|78034381|emb|CAJ22026.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540185|gb|EGD11799.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
Length = 183
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + G+I +I Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAGWIVWIGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N ++A
Sbjct: 57 AQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGLHRAIIVSDPLHMARAL 137
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ + + I + K+ NT
Sbjct: 65 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|251792809|ref|YP_003007535.1| molybdate ABC transporter permease [Aggregatibacter aphrophilus
NJ8700]
gi|247534202|gb|ACS97448.1| molybdate ABC transporter permease protein [Aggregatibacter
aphrophilus NJ8700]
Length = 248
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 30/136 (22%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R A +L L+ + + ISG
Sbjct: 69 DHLTLNDYRQAQAIVLL-GGGVRDSKELYAPLASSAVQLERLRYAAYLQKETQLPLLISG 127
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
V + VS L + + K+L T+ NA EK + ++
Sbjct: 128 VSPTGASEAKVSMQELQDFFNVPTQW------LEEKSLTTKENALFTRQLLEKEGINKII 181
Query: 124 IVTHDYHMPRTFLELQ 139
+VT+++HM R L +
Sbjct: 182 LVTNEWHMQRAKLLFE 197
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ +QK +++ L + I + K+ NT
Sbjct: 65 RLDEGLGLYNEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|16330498|ref|NP_441226.1| hypothetical protein sll1606 [Synechocystis sp. PCC 6803]
gi|1652989|dbj|BAA17906.1| sll1606 [Synechocystis sp. PCC 6803]
Length = 262
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 29 MHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVH- 71
+ + D P IVVL G R+ ++ + I +G
Sbjct: 69 LPMEDFPQAPVIVVLGGGLYQATYPRQFPEVAEAGDRVIYGAQIYQEGKAPYIITTGGRI 128
Query: 72 -----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+ S+ + + R D+ I K+LNT NA ++ + +++VT
Sbjct: 129 PWLGTVATSEAEDMALLLQRLDVPREAIIKEEKSLNTRQNAVFTQKILQQRGINTIILVT 188
Query: 127 HDYHMPRTFLELQRINSTVQFIP 149
YHMPR +++ + IP
Sbjct: 189 SGYHMPRAKRVFEKL--GIIVIP 209
>gi|187778517|ref|ZP_02994990.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
gi|187772142|gb|EDU35944.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
Length = 181
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L G+ I +SG ++S+ ++K + + + + I + K+ NT
Sbjct: 49 RLDEGLRLYNEGYGKYIIVSGAKGPGENISEAEAMEKYLVEKGVDKNFIILEDKSKNTLE 108
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 109 NIKFSKKKMEDNNLKSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVKPHMSHEIVGF 166
Query: 166 IKILRVLLIEYLKIL 180
+ + LL+ Y+K +
Sbjct: 167 FREIPALLVYYVKTI 181
>gi|91977540|ref|YP_570199.1| hypothetical protein RPD_3072 [Rhodopseudomonas palustris BisB5]
gi|91683996|gb|ABE40298.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 264
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 27/179 (15%)
Query: 33 DHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-----V 70
+ + I+VL G R+ A EL +I SG +
Sbjct: 75 NGRAPDGIIVLGGAVDSEVSAARSSLEIDSSAERVVAALELARQYPQARIIYSGGSGNLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+SV++ + ++ R +A + + K+ T NA L+VT +H
Sbjct: 135 ANSVAEAPIAGELLARFGVAPDRVVLESKSRTTAENASFTRELVSPKPGEVWLLVTSAFH 194
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-----IKILRVLLIEYLKILLLSI 184
MPR+ + + VQ P + + + F + + V + E+ +L +
Sbjct: 195 MPRSIEAFRAVEFDVQAYPVDWRTRGWRDAALPFDRLSSGLARMDVAVHEWAGLLAYRL 253
>gi|261868380|ref|YP_003256302.1| molybdate ABC transporter permease [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413712|gb|ACX83083.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 247
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 34/138 (24%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLEDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS LL + + K+L T+ NA EK +
Sbjct: 125 SGVSPTGASEAKVSAQELLDFFHVPTKW------LEEKSLTTKENALYTRQLLEKEGINK 178
Query: 122 VLIVTHDYHMPRTFLELQ 139
+++VT+++HM R L +
Sbjct: 179 IILVTNEWHMQRAKLLFE 196
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
Query: 33 DHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFISGVH----- 71
+ P AIV+L G R+ +L + +G
Sbjct: 73 ELPEADAIVILGGATKPPFPPRPTPEVDEAGDRVLYGAQLYREGKAPWVIPAGGRIVWGS 132
Query: 72 ---------HSVSKDILLQKIPIRQDLAECCIDIG---------YKALNTEGNAQEASAW 113
S S + P +D+A+ D+G ++LNT NA
Sbjct: 133 SSNNSSQRLSSESGQSSQRLAPESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRKI 192
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEENSSIFKIKIL 169
++ +F VL+VT HMPR+ L +R + IP P + H+L+E SS + +L
Sbjct: 193 LDQRDFPKVLLVTSAIHMPRSVLVFRR--QGIDVIPAPTDFLVSQHELDEPSSSSQAALL 250
Query: 170 RVL------------LIEYLKILLLSIQ 185
L + EY+ I+ I+
Sbjct: 251 HSLPNAEQLSRITRAIKEYIGIVAYRIR 278
>gi|326390031|ref|ZP_08211593.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993896|gb|EGD52326.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
Length = 192
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVL-------TGEP---IR 49
M+ + + ++ F+ I+ + + + P I+VL T P R
Sbjct: 1 MKLLLRFIGILIVIFVTVVITLEYQIISFALYEKPKKSDVIIVLGCAVYGKTPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L + G+ I +SG ++S+ ++ ++ + E I K+ +T N
Sbjct: 61 LDEALRLYKEGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGIPEKIILTDDKSFSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ +KN+ +I+++ +H+ R + +RI+ F I + L + + +
Sbjct: 121 LLFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIDINASFSGVFIKRYMLSDEA-YGFL 179
Query: 167 KILRVLLIEYLK 178
+ + LL YLK
Sbjct: 180 REIPALLYTYLK 191
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ + FI+ +I F+ + +P AI++L G RI A E I+ +G
Sbjct: 5 ILFLGFILFWIGFVPLRLAIAHQQYPQPQAILLLEGHRQRIPFAAEFWNQHPTLPIWFTG 64
Query: 70 VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
+ + Q+ + ++ I ++ +T N + + HHV ++T
Sbjct: 65 -SRTDRPRNQRIFQQAGVPAEM----IHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITS 119
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKI-LRVLLIEYLKILLLSI 184
DYHMPR L + + F P + + ++ + ++ LR +L + S+
Sbjct: 120 DYHMPRASAIATLVLGSQGIVFTPVSVPTSPPKQENQWRTLRDCLRSVLWMVTGVTGASL 179
Query: 185 QLSLSTQTA 193
+ A
Sbjct: 180 RSYFQPNIA 188
>gi|261365693|ref|ZP_05978576.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288565787|gb|EFC87347.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 224
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 3 YFWYGLFVCLIFFIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + G+ + ++ + F + + +P H A +VL G
Sbjct: 14 YLFRGIGLSILLILGIFSVGAWQVYHTGSQPLPRHVRADAALVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ EKI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVEKIVFTGGTSKKGYMTEAEVGRRYALKQGIPAHNIIFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
N + ++IV+ YH+ R I S + Y
Sbjct: 133 NIRNIRPILRAEGIESIIIVSDPYHLARAL----EIASDLDIEAY 173
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 68.3 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 32/165 (19%)
Query: 8 LFVCLI--FFIMGFISFIRYVKQMHIPDHPSVSA--------IVVLTGEP---------- 47
L +C+I F+++ + + P S A I++L G
Sbjct: 47 LVICMIALFWLLAAGWLTAPLLDLAQPQRQSAEAATFAPRTAIILLGGGTIYDHDHVLVP 106
Query: 48 -----IRIERAFELLENQI----GEKIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RIE + + ++ +SG + S ++ +RQ + I
Sbjct: 107 PRDVLSRIEVSAQNYAACKRTAIVCQVIVSGGNPQRHSATEADTYLPYLLRQQVPRSDIV 166
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
+ + T NA+ S ++++ +++VT YHMPR L+ QR
Sbjct: 167 LEKSSRTTYENARNVSVIVGQSHYDKLILVTSAYHMPRALLDFQR 211
>gi|293392078|ref|ZP_06636412.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952612|gb|EFE02731.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 247
Score = 68.3 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 34/138 (24%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFEL-------------------LENQIGEKIFI 67
+ + D+ AIV+L G + + EL L+ + + I
Sbjct: 68 DHLTLEDYKQAQAIVLLGGG---VRDSKELYAPLASSATQLERLRYAAYLQKETQLPLLI 124
Query: 68 SGVHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SGV + VS LL + + K+L T+ NA EK +
Sbjct: 125 SGVSPTGASEAKVSAQELLDFFHVPTKW------LEEKSLTTKENALYTRQLLEKEGINK 178
Query: 122 VLIVTHDYHMPRTFLELQ 139
+++VT+++HM R L +
Sbjct: 179 IILVTNEWHMQRAKLLFE 196
>gi|167039302|ref|YP_001662287.1| hypothetical protein Teth514_0643 [Thermoanaerobacter sp. X514]
gi|256752180|ref|ZP_05493045.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913942|ref|ZP_07131259.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307725373|ref|YP_003905124.1| hypothetical protein Thet_2282 [Thermoanaerobacter sp. X513]
gi|166853542|gb|ABY91951.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X514]
gi|256748908|gb|EEU61947.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890627|gb|EFK85772.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307582434|gb|ADN55833.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X513]
Length = 192
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVL-------TGEP---IR 49
M+ + V ++ F+ I+ + + + P I+VL T P R
Sbjct: 1 MKLLLRFIGVLIVIFVTVVITLEYQIISFALYEKPKKSDVIIVLGCAVYGKTPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++ A L + G+ I +SG ++S+ ++ ++ + E I K+L+T N
Sbjct: 61 LDEALRLYKEGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGIPEKIILTDNKSLSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ +KN+ +I+++ +H+ R
Sbjct: 121 LFFSKEIMDKNSLKTAIIISNKFHLKRA 148
>gi|154249896|ref|YP_001410721.1| hypothetical protein Fnod_1217 [Fervidobacterium nodosum Rt17-B1]
gi|154153832|gb|ABS61064.1| protein of unknown function DUF218 [Fervidobacterium nodosum
Rt17-B1]
Length = 219
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 22/172 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAI--VVLTGEPI----------- 48
+ + L L+F+ + F + + + I VVL G
Sbjct: 15 KLAFLFLSFALVFYFLTSNLFAYLISKTFVLKDTEDKGIFIVVLGGGVDEFSNNVEIGKH 74
Query: 49 ---RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ +A EL +N KI ++G + V + ++++ + + + E I +G KA NT
Sbjct: 75 TLRRLYKALELYKN-RPRKIIVTGGIIDKGVPEALIMKNVLLNFGVPEEDIILGSKARNT 133
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
N + + +VT HM R+ ++ V F+ +
Sbjct: 134 FENGKCTFELI---GDVPITLVTSTIHMKRSLFVFRKFFKDVSFVSADVPVD 182
>gi|150398639|ref|YP_001329106.1| hypothetical protein Smed_3453 [Sinorhizobium medicae WSM419]
gi|150030154|gb|ABR62271.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 262
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 33/213 (15%)
Query: 3 YFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE-------------- 46
F + +F G F+ + P+ ++ ++VL G
Sbjct: 42 VFGLAVLFITLFTTAGSYFLQILEDRFPRPSPEPAELACMIVLGGAFENVVMASRGGIEM 101
Query: 47 ---PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDIGY 98
R L G +I +SG S+S + +
Sbjct: 102 NQAAERFVETLRLARAHPGARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGPERLIREG 161
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII---SH 155
++ T NA+ +N +VT YHMPR+ + + ++ P+P+ S
Sbjct: 162 ESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRA--NDIEVTPWPVDYRTSG 219
Query: 156 DLEENSSIFKIKILRVLLI----EYLKILLLSI 184
+ + + L E+ +L +
Sbjct: 220 KVRLGVDFTQPSLNAQLATTAAKEWTGLLAYYL 252
>gi|28897807|ref|NP_797412.1| hypothetical protein VP1033 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838515|ref|ZP_01991182.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260876969|ref|ZP_05889324.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260898706|ref|ZP_05907202.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900663|ref|ZP_05909058.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806020|dbj|BAC59296.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748082|gb|EDM58941.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089504|gb|EFO39199.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093685|gb|EFO43380.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308106719|gb|EFO44259.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|328473218|gb|EGF44066.1| hypothetical protein VP10329_21110 [Vibrio parahaemolyticus 10329]
Length = 261
Score = 68.0 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYDGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P ++E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIDEVSQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELFWHEYLGSVWQRLRDTVGQTP 256
>gi|282896704|ref|ZP_06304712.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
gi|281198422|gb|EFA73310.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
Length = 263
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 73/221 (33%), Gaps = 43/221 (19%)
Query: 9 FVCLIFFIMGFISFIR----YVKQMHIPDHPSVSAIVVLTG----------------EPI 48
L+ G++S + + P AIVVL G
Sbjct: 45 LAILMIAGNGWVSKALVGSLEWQNIPPGKIPEAEAIVVLGGATKPAAWPRSTVDLNESGD 104
Query: 49 RIERAFELLENQIGEKIFISGVH---HSVSKDIL--LQKIPIRQDLAECCIDIGYKALNT 103
R+ A +L + I +SG + I I + I +LNT
Sbjct: 105 RVIYAAQLYGQKKAPLIILSGGRIDWRGSGPPESADMAAILISLGIPPEVIIEEPNSLNT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP----IISHDLEE 159
NA E VL+VT H PR+ QR V+ IP P + DLEE
Sbjct: 165 YENAVNVRKILESRGIKKVLLVTSAMHTPRSLKIFQR--QGVEVIPAPTDFIVSRSDLEE 222
Query: 160 NSSIFKIKILRV------------LLIEYLKILLLSIQLSL 188
+ K IL + L EY+ L+ +++ L
Sbjct: 223 LIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRGWL 263
>gi|225025892|ref|ZP_03715084.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
gi|224956789|gb|EEG37998.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
Length = 213
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 30/180 (16%)
Query: 36 SVSAIVVLTGEPIR---IERAFELLENQIGEKIFISGVHHSVS----------------- 75
AI + R E A L ++ + SG + V
Sbjct: 34 KADAIFIP--GCARPEHTEEAARLYKDGYAPLLLPSGGYTKVQGSFQGVSKEGQKYGADF 91
Query: 76 --KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH--HVLIVTHDYHM 131
+ L+ + I+ + I +A T NA++ EK + H ++ +H
Sbjct: 92 ACEADFLEAVLIQNGVPASAILKECEATYTLENAEKTKVLLEKKDIHLKKAILCCKAHHS 151
Query: 132 PRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK----ILLLSIQLS 187
R++L + ++ + YP++ + + +V+L E+ + +L++ +++
Sbjct: 152 RRSYLYYSMVFPEIEILVYPVVVDGISREDWYKTAEGRKVVLGEFSRMGQQLLMMEGRIA 211
>gi|13470862|ref|NP_102431.1| hypothetical protein mll0674 [Mesorhizobium loti MAFF303099]
gi|14021605|dbj|BAB48217.1| mll0674 [Mesorhizobium loti MAFF303099]
Length = 265
Score = 68.0 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 37/195 (18%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERAFELLENQI-----GEKIF---------------IS 68
P V IVVL G E A L G+++ +S
Sbjct: 70 PRPPLPQKVDGIVVLGGGF---EGAINLARGGYELSSSGDRMVETAILARRFPLAKVVVS 126
Query: 69 GVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G H + ++ + ++ + + K+ NT NA + E L
Sbjct: 127 GGHGAFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPKPGETWL 186
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPIISH-------DLEENSSIFKIKILRVLLIEY 176
+VT +HMPR + +P+P+ H L +++I ++ + L E+
Sbjct: 187 LVTSAFHMPRAKALFDKA--GFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIALREW 244
Query: 177 LKILLLSIQLSLSTQ 191
+ + + +
Sbjct: 245 IGLFAYWLSGRIDQP 259
>gi|163802067|ref|ZP_02195963.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
gi|159174208|gb|EDP59016.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
Length = 268
Score = 68.0 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALSLGVAKSDIILLEDAEDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE--ENSSIF 164
A++A+A+ ++ + +++VT HM R E ++ IP P ++ E S
Sbjct: 168 ARQAAAFVKQKD---IVLVTSASHMKRALYEFHAA--GIKPIPAPTNFMAIDEIEQSWQK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L E+L L ++ ++
Sbjct: 223 YAPKARYLEQTELYWYEFLGGLWQKLRDNVGQTP 256
>gi|308125795|ref|ZP_07663526.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
gi|308113292|gb|EFO50832.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 67.6 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 34 RLTEGIRILRMYPGAKLILSGYDGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 93
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P ++E
Sbjct: 94 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIDEVSQPWDK 148
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 149 YSPKARYLEQTELFWHEYLGSVWQRLRDTVGQTP 182
>gi|292670312|ref|ZP_06603738.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648043|gb|EFF66015.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 252
Score = 67.6 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 22/145 (15%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP---IRIERAFELLENQIGEKIF--------------ISG 69
+ +P HP IV+L G +R +L ++ +SG
Sbjct: 67 RTYEVPVHPQGDIIVMLGGGAIADVRDVDGTGMLAQSPSSRLLAVLRLHRRYHLPILLSG 126
Query: 70 --VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
V S+ + +++ + I + + T NA+ ++ + F H ++VT
Sbjct: 127 GQVFSDTGSEAEIARRVLRSLGVPSEMIYVETHSRTTGQNARYSAEILRREGFAHPILVT 186
Query: 127 HDYHMPRTFLELQRINSTVQFIPYP 151
+H+PR L ++ V PYP
Sbjct: 187 SAFHLPRAVLNFEK--EGVAVTPYP 209
>gi|295695151|ref|YP_003588389.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
gi|295410753|gb|ADG05245.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
Length = 188
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+E +L +I +SG S+ ++ + + + + + +T
Sbjct: 49 RARLEAGLDLYRRGYAPRILVSGGQRRPGAPSEADVMADYLRVRGVPPRALIVEDLSSDT 108
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSI 163
N +S + + + ++VT YH+PR + Y S D+ + +
Sbjct: 109 VENLLFSSRLMKIHGWRRAVVVTSAYHLPRALWLARLAGLDAS--GYAPASADV-LGTWM 165
Query: 164 FKIKILRVLLIEYLKI 179
+ ++ + Y K
Sbjct: 166 YALREIPAFWRSYQKW 181
>gi|148657753|ref|YP_001277958.1| hypothetical protein RoseRS_3653 [Roseiflexus sp. RS-1]
gi|148569863|gb|ABQ92008.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 191
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 13/192 (6%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKI 65
L + + G+ AIVVL G P+R + A +L +I
Sbjct: 2 LLTIAALTVSAGWWLPALGGLLALEGRPAHADAIVVLGGGFPLRDQHAIDLYREGWAREI 61
Query: 66 FISGVHHS-----VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ +G L + + + + +T + +E + A++ +
Sbjct: 62 WRTGDLPGGSVVLQKARRLALQQGVPETAF-----VPVATDSTWADGREIARMAQERHAQ 116
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPY--PIISHDLEENSSIFKIKILRVLLIEYLK 178
+LIVT H R + R + + + ++ + R++ E LK
Sbjct: 117 RLLIVTEWPHSRRAMCVINRHLAGTGVVAFYDGPRHPPYTPSNWWRDPEGRRIVSGEMLK 176
Query: 179 ILLLSIQLSLST 190
+ ++ ++
Sbjct: 177 TIYYLLRFGVTP 188
>gi|83720198|ref|YP_443090.1| hypothetical protein BTH_I2573 [Burkholderia thailandensis E264]
gi|83654023|gb|ABC38086.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 301
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 152 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 211
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 212 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 267
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 268 GWL-PRAVNLVNAE 280
>gi|91228201|ref|ZP_01262183.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
gi|91188190|gb|EAS74491.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
Length = 261
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAIREISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 29/207 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPI-------------- 48
W L++ + G + + P AIV+L+
Sbjct: 42 WLFLWLASTPLVAGMLLVSLQTAPALPVVGELPPAQAIVILSAGQDLDAPEYGRAMPDND 101
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDILLQKI--PIRQDLAECCIDIGYKALNT 103
RI L +++ I ++G + + Q + + L +A+NT
Sbjct: 102 TLTRIAYGAHL-QHRTALPILVTGGAATPGSAAVAQVMLHTLESQLGARVRWTDERAMNT 160
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS- 162
NA+ A+A + +VTH +HMPR + V P S
Sbjct: 161 HENARNAAAILSAEGIERIYLVTHAWHMPRALRSFEAEGLDVVPAPTGFRDRPWRGPRSL 220
Query: 163 ---IFKIKILRVLLIEYLK---ILLLS 183
I+ E++ L
Sbjct: 221 IPRWSAIRDTYRAAHEWVGRLYYLAAY 247
>gi|304436974|ref|ZP_07396937.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369925|gb|EFM23587.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 252
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 26/147 (17%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIER-----AFELLENQIGEKIF--------------I 67
+ +P+ P I++L G I +L ++ +
Sbjct: 67 RTYPVPEAPQGDVIIMLGGGA--IADVQDVDGTGMLAQSPSSRLLAVYRLHLRTHLPILL 124
Query: 68 SG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SG V S+ + +++ + + I + ++L T NA+ + + F H ++
Sbjct: 125 SGGQVFSDTGSEAEIARRVLRSLGVPDDMIYVETRSLTTGQNARYTAEILRREGFVHPIL 184
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L ++ + PYP
Sbjct: 185 VTSAFHLPRAVLNFEK--QGITVTPYP 209
>gi|285017167|ref|YP_003374878.1| hypothetical protein XALc_0349 [Xanthomonas albilineans GPE PC73]
gi|283472385|emb|CBA14890.1| hypothetical protein XALc_0349 [Xanthomonas albilineans]
Length = 204
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 13/113 (11%)
Query: 36 SVSAIVVLTGEP----------IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQK 82
AI+VL RI A +L + +G ++ + ++
Sbjct: 46 PADAIIVLGAAAYDAKPSPVFEERIRHALDLYRRGYAPTLIFTGGFGNGARFAEAQVARR 105
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+RQ + + I + T N +A + V++V+ HM R
Sbjct: 106 YALRQGVPADAVLIETISRTTRQNLIQARQIMRAHGLRRVIVVSDPLHMARAL 158
>gi|157364443|ref|YP_001471210.1| hypothetical protein Tlet_1592 [Thermotoga lettingae TMO]
gi|157315047|gb|ABV34146.1| protein of unknown function DUF218 [Thermotoga lettingae TMO]
Length = 245
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 57/168 (33%), Gaps = 20/168 (11%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTGEPIRIERA----- 53
F L +C FF G + + + + A+VVL G ++
Sbjct: 37 AIFMIFLALCFYFFSSGLGALTLVLPLERSYEISIPKKIDAVVVLGGGIVKTPNGYQPSQ 96
Query: 54 ---FELLENQIGEK-----IFISGVH----HSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
LLE K + ISG + + ++++ + I I I A
Sbjct: 97 SSIVRLLEGVRIAKDFDSFLIISGGMLPLLNQPPEAVVMRDLAISLGFPAEAIIIEPDAK 156
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
T NA S + F +V++VT HM R + TV P
Sbjct: 157 TTFENAIFTSQICREKGFQNVVVVTSAIHMKRAIYSFSKARFTVHPCP 204
>gi|119502798|ref|ZP_01624883.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
gi|119461144|gb|EAW42234.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
Length = 236
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 54/177 (30%), Gaps = 24/177 (13%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPI----------------RIERAFELLENQIGEKIFISGV 70
+ P+ AIV+L G R+ A EL I ISG
Sbjct: 51 PAFSPEELPAAQAIVLLGGASNGAARFGRGADLNDAADRVMFAAELYFAGKAPIILISGG 110
Query: 71 HHSV--SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ LL + + + + ++ T NA A + H+L+VT
Sbjct: 111 APETMQPEAELLAQQLQALQIPRKQLLLETQSRTTFDNAVMAGEMLKNAGLQHILLVTSG 170
Query: 129 YHMPRTFLELQRINSTVQFIPY----PIISHDLEENSSIFKIKILR--VLLIEYLKI 179
HM R+ +R V P S ++ R + E++
Sbjct: 171 AHMRRSLALFERQGLQVTAAATDHQIPKFSDPYIPGWIPTYARLARSSRAIHEWVGY 227
>gi|51891778|ref|YP_074469.1| hypothetical protein STH640 [Symbiobacterium thermophilum IAM
14863]
gi|51855467|dbj|BAD39625.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 187
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 33 DHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQ 87
+ I+V G R ERA EL + + K+FI+G V + L+ +
Sbjct: 23 EPTPGDLILVF-GGKRLERAERAAELYKAGLAPKVFITGGDKRGIGVCEAERLRDHMVEL 81
Query: 88 DLAECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQ-RIN 142
+ IDI + LNT Q + E+ N +VL+V+ +HM R + I
Sbjct: 82 SVPAEAIDIECEGLNTIEQVQYSVKRIEETIGWKNIKNVLLVSAPHHMRRVKRTIANYIP 141
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
+ P D+ ++ +++ E K
Sbjct: 142 RETKITCCPDRRTDITRDNWWHTDDGQKLVYRELEK 177
>gi|188587339|ref|YP_001918884.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352026|gb|ACB86296.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 230
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 35/203 (17%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGE-PIRIERAFELLENQIGE 63
+ + IF+ + +++ + I+VL G P RI EL ++ E
Sbjct: 27 AILILTIFWDNLLTAIGKFLVAEEPLER---DGSYILVLQGGIPDRIAHGVELHQDNYAE 83
Query: 64 KIFISGVHHSV---------------SKDILLQKIPIRQDLAECCIDI-GYKALNTEGNA 107
I + V S + ++ ++ + + I+I K +T+ A
Sbjct: 84 NILM--VESKSFTNYELMEQKQLDLPSSAEINKQAAMQMGIDDDQINIIPGKVDSTQQEA 141
Query: 108 QEASAWAEKNNFHH-----VLIVTHDYHMPRTFLEL-----QRINSTVQFIPYPIISHDL 157
+ + + N +H V++VT YH R L L + + + + P
Sbjct: 142 GKVAQYLSSN-YHSEEDLKVILVTSRYHSKRAKLILQTELKEHDLTNIDIVSSPSHYDPY 200
Query: 158 EENSSIFKIKILRVLLIEYLKIL 180
+ + R +EYLK++
Sbjct: 201 YPDEWWKNRRQARNTFMEYLKLI 223
>gi|329118151|ref|ZP_08246863.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465811|gb|EGF12084.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
Length = 222
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 16/190 (8%)
Query: 4 FWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV---SAIVVLTGEP----------IRI 50
W G + + ++ F+ V + P A VVL RI
Sbjct: 18 LWRGFAISVALVLLFFVWCAWSVYRTGRDGLPQGYTGDAAVVLGAAAWDARPSPVFRERI 77
Query: 51 ERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
A L + K+ +G +S+ + ++ ++Q + I + K+ T N
Sbjct: 78 NHAVGLYRSGRVRKLVFTGGAVKKGYMSEGEVGRRYALKQGVPAEDILLENKSRTTYENL 137
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
A + ++IV+ H+ R + + Q P P + + F+++
Sbjct: 138 AYLRAPLREAGLRKIVIVSDPPHLARAAAVARDLGLDAQVSPTPTTRYAEGGSRFKFQLR 197
Query: 168 ILRVLLIEYL 177
+L YL
Sbjct: 198 ETVLLAGYYL 207
>gi|239832066|ref|ZP_04680395.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824333|gb|EEQ95901.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 279
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 56/179 (31%), Gaps = 28/179 (15%)
Query: 1 MRYFWYGLFVCLIFFI--MGFISFIRYVKQMHIPD--HPSVSAIVVLTG----------- 45
M L + +G + + PD V IVVL G
Sbjct: 54 MGLLALSLATLFLAAFTTLGAVLLAPLEDRFAKPDAMPQRVDGIVVLGGYMNGEINAGRK 113
Query: 46 ------EPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCI 94
RI A L K+ +SG S + +++ +
Sbjct: 114 GFELNSAADRIFEAMRLARLYPDAKVIVSGGEGAFFEKSAKEADSTRQMLADLGFSGERY 173
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
K+ NT NA + A+ L+VT YHMPR+ ++ V + +P+
Sbjct: 174 IFENKSRNTVENAVFSKELAQPKPGETWLLVTSAYHMPRSIGCFRKAGFDV--VAWPVD 230
>gi|159027601|emb|CAO86973.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 206
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 10/154 (6%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS 68
+ + + G ++Q + AI VL G R A +L + I++S
Sbjct: 22 LLAIPLILAGLGWLYLDLRQQWLKPE----AIFVLGGHADRERFAAKLAKEYPDLPIWVS 77
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ +K I + + Y A +T N + + V +VT D
Sbjct: 78 SGSPRRYVQKIFKKAGIPPERLH----LDYNARDTVTNFTSLADQLKAQGIDSVYLVTSD 133
Query: 129 YHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
HM R L E+ + + P + S E
Sbjct: 134 NHMRRARLVGEIIFGSRGIVIKPVTVPSQSPPEP 167
>gi|188582432|ref|YP_001925877.1| hypothetical protein Mpop_3190 [Methylobacterium populi BJ001]
gi|179345930|gb|ACB81342.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 278
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 41/180 (22%)
Query: 5 WYGLFVC----LIFFIMG-----FISFIRYVKQMHIPDHPSVSAIVVLTG--------EP 47
+ GL L +++G F +F D V+ IVVL G
Sbjct: 60 FLGLLAAGLSPLSAWVLGPLENRFPAFAD--------DERPVAGIVVLGGAVEADTSIGR 111
Query: 48 IRI---ERA------FELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECC 93
+I + +L ++ SG +VS+ ++ + +
Sbjct: 112 NQITVNDAGEREIALADLARRFPQARLVFSGGAGSLREDAVSEAEIVSRYADTLGVPRNR 171
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ + ++ NT NA ++ + L+VT +HMPR +R V YP+
Sbjct: 172 LILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRAVGCFRRAGFDVT--AYPVD 229
>gi|226311001|ref|YP_002770895.1| hypothetical protein BBR47_14140 [Brevibacillus brevis NBRC 100599]
gi|226093949|dbj|BAH42391.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G R+E+A L + K+ ++G ++++ + + + + + E I + K+
Sbjct: 68 GLRERLEQAAILYKEGYVSKLLVTGGLGEGKTITEAAVSRNYLVAKGIPEEDILLESKST 127
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
+T N E+++ LI++HDYH+ R + + ++ + P+
Sbjct: 128 STYENLLYGQQVLEEHHIQDALIISHDYHLARAMV----MADSLGIVASPV 174
>gi|195953339|ref|YP_002121629.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
gi|195932951|gb|ACG57651.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 29 MHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEKIFISGVHHSVSKD 77
+ +AIVVL G R+ L + +SG+
Sbjct: 68 SQPKGFLNANAIVVLGGGYYKNGNLSGETVKRLLAGVYLSYKTKIP-LILSGIDIKYLPK 126
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN---NFHHVLIVTHDYHMPRT 134
+ + + I K+ +T NA ++ + + + +++VT YHMPR
Sbjct: 127 N-TPIVKLINAIDIGNIYEDVKSKDTMQNAAQSYKVCTRYITPDCNSIILVTSAYHMPRA 185
Query: 135 FLELQRINSTVQFIPYPII-SHDLEENSSIFKIKILRV-----LLIEYLKILLLSI 184
+ R V IPYP+ DL N F + + + EYL IL I
Sbjct: 186 KMLFDRFFKNV--IPYPVDYKEDLRYNVRSFLPNMSDLENSTKAIREYLGILYYFI 239
>gi|89092000|ref|ZP_01164955.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
gi|89083735|gb|EAR62952.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
Length = 272
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 28/149 (18%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
V+ TG I R + Q Q LA I I +
Sbjct: 126 VIYTGGSGSIFR-------------------PGYRGADVAQNWLSEQGLAGRLI-IERDS 165
Query: 101 LNTEGNAQEASAWAEKNNFHH---VLIVTHDYHMPRTFLELQRINSTVQFIPYPI---IS 154
NT NA + L++T +HMPR+ ++ + +PYP+ ++
Sbjct: 166 RNTYQNALYTRELINELGADSQGSWLLITSAFHMPRSVGVFRKA--GIDVVPYPVDYRVA 223
Query: 155 HDLEENSSIFKIKILRVLLIEYLKILLLS 183
+ S + L + + E++ +L
Sbjct: 224 ENRWRPSLNRNMADLNLAVREWIGLLAYY 252
>gi|241760602|ref|ZP_04758694.1| periplasmic protein [Neisseria flavescens SK114]
gi|241318783|gb|EER55309.1| periplasmic protein [Neisseria flavescens SK114]
Length = 218
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 3 YFWYGLFVCLIFFIMGFI---SFIRYVKQMHIPDHPSVSAIVVLTGEP-----------I 48
Y + GL + ++ F+ I +P A VVL G
Sbjct: 14 YLFRGLALSVLLVCGIFLAGTWQIYRTGLQTLPKDAHADAAVVL-GAAAWDKRPSPVFRE 72
Query: 49 RIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A L ++ KI +G +++ + ++ ++Q + I + NT
Sbjct: 73 RINHAITLYQSHRVGKIIFTGSTSKKGFMTEAEVGRRYALKQGIPAHNILFENTSRNTYE 132
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + N +++V+ YH+ R
Sbjct: 133 NLRNIIPIMHANGVGSIIVVSDPYHLARA 161
>gi|242279972|ref|YP_002992101.1| hypothetical protein Desal_2506 [Desulfovibrio salexigens DSM 2638]
gi|242122866|gb|ACS80562.1| protein of unknown function DUF218 [Desulfovibrio salexigens DSM
2638]
Length = 214
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 29/211 (13%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
G + F V + AIVVL G R A +L +I
Sbjct: 11 IGALTVAGILAAAVLFFFAPVLLQQEDELEKADAIVVLGGHYYRPLYAADLYNKGYAPRI 70
Query: 66 FISGVHHSVSKD---------------ILLQKIPIRQDLAECCID-IGYKALNTEGNAQE 109
S ++ + + + + +++D+ I+ G ++T A++
Sbjct: 71 LAS--KPVITPEIEAVRDLDIHFPYQWEVFRDVLLKKDVPAERIEFFGKANISTLDEAEK 128
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRT-FLELQRINSTVQFI----PYPIISHDLEENSSIF 164
+++VT H R + + + V+ I PY +
Sbjct: 129 LRDKLTPQ-IKSIILVTSPMHTRRAGIIFREILPPNVKIIVVGTPYEVTP-----ERWWT 182
Query: 165 KIKILRVLLIEYLKILLLSIQLSLSTQTASQ 195
+ +++E K L + + ++
Sbjct: 183 NFRAAPFVVLEVAKTLYYEFGGAFRSSESTT 213
>gi|92117952|ref|YP_577681.1| hypothetical protein Nham_2431 [Nitrobacter hamburgensis X14]
gi|91800846|gb|ABE63221.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 267
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 33 DHPSVSAIVVL-----------------TGEPIRIERAFELLENQIGEKIFISG-----V 70
D I++L G RI EL ++ SG +
Sbjct: 75 DGREPDGIIILGGAIEPELSAARKAVEVNGAAERIIGGLELARRFPRARVVYSGGSANLI 134
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
VS+ + ++ ++ I + ++ T+ NA+ L+VT YH
Sbjct: 135 ADPVSEAPIAGRLLETFGISPERIVLESESRTTDENARFTRKLVSPKPGERWLLVTSAYH 194
Query: 131 MPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL----------LIEYLKIL 180
MPR+ ++ V+ YP+ D I L + E+ +L
Sbjct: 195 MPRSIGVFRKAGLDVE--AYPV---DWRTRGWIDAWTPFDRLSAGLARADTAVHEWCGLL 249
Query: 181 LLSI 184
+
Sbjct: 250 AYRL 253
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ L + G+ I +SG ++S+ +QK +++ L + I K+ NT
Sbjct: 65 RLDEGLRLYNDGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLE 124
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N + + E NN +IV++ YH+ R EL ++ + + +
Sbjct: 125 NIKFSKKKMEDNNLSSSIIVSNKYHLKRA--ELLCQKEGIKASYSGVFVRSHMSHEIMGF 182
Query: 166 IKILRVLLIEYLKIL 180
++ + LL+ Y+K +
Sbjct: 183 LREIPALLVYYIKTM 197
>gi|254455840|ref|ZP_05069269.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082842|gb|EDZ60268.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 228
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 19 FISFIRYVKQMHIPDH-PSVSAIVVLTG-----------------EPIRIERAFELLENQ 60
++++ Q+ P + +IVVL+G RI L + +
Sbjct: 35 LVAYLESDYQLSKPSNIEPADSIVVLSGMIRTINSKDGLDYEFGEASDRIFAGINLFKEK 94
Query: 61 IGEKIFIS-GVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
K+ ++ G + + L++I I ++E I + NT+ A+ +
Sbjct: 95 KAPKLILTRGKLPWSVGIPEGEYLKEIAINNGISENNILLTENVENTDQEAKAIKKLLSE 154
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ VL+VT +HMPR + + +P+P+
Sbjct: 155 DK-SKVLLVTSAFHMPRAQKVFEAA--GINVVPFPVD 188
>gi|33865854|ref|NP_897413.1| hypothetical protein SYNW1320 [Synechococcus sp. WH 8102]
gi|33633024|emb|CAE07835.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 250
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 33/198 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--------FISFIRYVKQMHIPDHPSVSAIVVLTGEPI----- 48
R W + + +I + ++ + P AIVVL+G
Sbjct: 30 RRHWPVVAAMSLLWIFSTGVVSQLLWRWVEHPYQRRSVERAPLADAIVVLSGGRHPAPGP 89
Query: 49 ----------RIERAFELLENQIGEKIFISGV----HHSVSKD-ILLQKIPIRQDLAECC 93
R L ++ ++ + H + + L + + +
Sbjct: 90 AQISEWHDPDRFLAGVALFQSGRASRLLFTRGQNPFHPGLPPEGELYRAEAVDLGVPATS 149
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I + + NT A + VL+VT +HM R + +R + +PYP+
Sbjct: 150 IGLTDRVTNTAQEANAIRRLL-PQDQPRVLLVTSAFHMRRAQVLFER--QGLTVLPYPVD 206
Query: 154 --SHDLEENSSIFKIKIL 169
+
Sbjct: 207 FQARAAWAGFIWRDPLQW 224
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 38/199 (19%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP--------------- 47
+F+++ + + P + + AI++L G
Sbjct: 29 VALFWLLSTGWLTAPLLSLAQPQAETSAPTRFAPRTAIILLGGGTVYNRDKVLVPPREVM 88
Query: 48 IRIERAFELLENQIGEK----IFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKA 100
RI + E + +SG + ++ +R+ + I + ++
Sbjct: 89 ARIAVSAENYAACKRSATVCSVIVSGGNPQRHPATEADTYLPYLLREQVPRSDIVLENRS 148
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS +
Sbjct: 149 LTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFG----LEPQPLISGARRAH 204
Query: 161 ----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 205 LGLLPRYSNLANAELALHE 223
>gi|220935848|ref|YP_002514747.1| hypothetical protein Tgr7_2685 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997158|gb|ACL73760.1| conserved protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 77/223 (34%), Gaps = 44/223 (19%)
Query: 2 RYFWYGLFVCLIFF--IMGFISFIRYVKQ-------MHIPDHPSVSAIVVLTGEPI---- 48
R GL I + + F ++ + P + AIVVL G
Sbjct: 27 RRLGKGLVFAGIAWLYVAATPLFAGWLLAGLERGYPVAPPLPEAAGAIVVLAGGRHPDAP 86
Query: 49 -------------RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID 95
R+ L G + +SG V D + + D+ E +
Sbjct: 87 EYGGETVSPHSLERLRYGARL-HRDTGLPLLVSGG--RVRGDEPAAEADLLADVLEGELG 143
Query: 96 I-----GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+ ++ NT NA ++ + H L+V+H HMPR QR + P+
Sbjct: 144 VAVRWRETESRNTCENALFSAHLLAEAGIEHALLVSHALHMPRAVWCFQRT--ELAVTPF 201
Query: 151 PIIS-HDLEENSSIF----KIKILRV---LLIEYLKILLLSIQ 185
P + DL + I + + L + L EYL ++ ++
Sbjct: 202 PTLPMGDLSRHRGITVVLPQPRALWLTGQALHEYLGLVWYRVK 244
>gi|269967671|ref|ZP_06181721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827758|gb|EEZ82042.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 261
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAISEISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|156740504|ref|YP_001430633.1| hypothetical protein Rcas_0485 [Roseiflexus castenholzii DSM 13941]
gi|156231832|gb|ABU56615.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 225
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 13/182 (7%)
Query: 17 MGFISFIRYVKQMHIPDHPSVSAIVVLTGE-PIRIERAFELLENQIGEKIFISGVHHS-- 73
G+ AIVVL G P+R + A +L +I+ +G
Sbjct: 46 AGWWLPALGSLLALPGRTARADAIVVLGGGFPLRDQHAIDLYREGWAREIWRTGEMPGGS 105
Query: 74 ---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
L + + I +T + +E + A + V+IVT H
Sbjct: 106 AVVQKARRLAIQQGVPAAAFVPLIT-----DSTWTDGREIARMARERKVERVIIVTDWSH 160
Query: 131 MPRTFLELQR--INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
R ++ S ++ + + R++ E LK ++ +
Sbjct: 161 SRRALCVIKHHLAGSGIEAFYDGPRNPPYTPFDWWHHPEGRRIVAGELLKTFYYLLRFGV 220
Query: 189 ST 190
+
Sbjct: 221 TP 222
>gi|254228980|ref|ZP_04922401.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262394709|ref|YP_003286563.1| membrane protein [Vibrio sp. Ex25]
gi|151938448|gb|EDN57285.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262338303|gb|ACY52098.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. Ex25]
Length = 261
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG +S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILRMYPGAKLILSGYAGGSEISHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE--NSSIF 164
A++A+A+ ++ +++VT HM R E ++ IP P + E
Sbjct: 168 ARQAAAFVQQKE---IVLVTSASHMSRALYEFNAA--GIKPIPAPTNFLAISEISQPWDK 222
Query: 165 KIKILRVL------LIEYLKILLLSIQLSLSTQT 192
R L EYL + ++ ++
Sbjct: 223 YSPKARYLEQTELYWHEYLGSIWQRLRDTVGQTP 256
>gi|15893643|ref|NP_346992.1| hypothetical protein CA_C0352 [Clostridium acetobutylicum ATCC 824]
gi|15023198|gb|AAK78332.1|AE007549_12 Uncharacterized conserved membrane protein, SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507765|gb|ADZ19401.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 225
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+ +A +L KI SG V++ + ++ + C+ K+ NT
Sbjct: 69 RERVIKAVKLFNKGYANKIICSGGGVYNKYIESDVMANFAKSLGIPNGCLIKEDKSRNTY 128
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
N Q + E ++ ++VT +H+ R+ L +
Sbjct: 129 QNIQNSIKIMENKHWSSAIVVTSPWHLRRSNYFLSK 164
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 38/204 (18%)
Query: 6 YGLFVCLIFFIMGFISFIR--------YVKQMHIPDHPSVSAIVVLTGE--PIR------ 49
IF+++ + +AIV+L G R
Sbjct: 24 LLFCTIAIFWLLSAGWLTAPLLSLAQPQAQTSTPARFAPRTAIVLLGGGTVYNRDKVLVP 83
Query: 50 ---IERAFELLENQIG--EK------IFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
+ + ++ + +SG + + ++ +R+ + I
Sbjct: 84 PREVLARIAVSAKNYAACKRSATVCSVIVSGGNPQRHAATEADTYLPYLLREQVPRSDIV 143
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++L T NA+ SA ++ + +++VT YHMPR L+ + P P+IS
Sbjct: 144 LENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRAMLDFRHFG----LEPQPLISS 199
Query: 156 DLEEN----SSIFKIKILRVLLIE 175
+ + L E
Sbjct: 200 ARRARLGVLPRYSNLANAEIALHE 223
>gi|70732742|ref|YP_262505.1| hypothetical protein PFL_5437 [Pseudomonas fluorescens Pf-5]
gi|68347041|gb|AAY94647.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 253
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 47/217 (21%)
Query: 11 CLIFFIMGFI---------SFIRYVKQMHIPDHPS-------VSAIVVLTGEPIRIE--- 51
C + GF R ++++ IVVL R +
Sbjct: 38 CFALGLGGFWLMSLPVMVEWGARGLERLPPLPQSQWASLAEQADVIVVLGSGRERGDPAW 97
Query: 52 -----RAFELLENQIGEKI--------FISGV-HHSVSKDILLQKIPIRQDLAECCIDIG 97
L + ++ SG H+ + + L + + +
Sbjct: 98 GSDQPTGVGLERERYASRLAKASGLPVLTSGGLHYGTPPTE--AALMAQSLLDDFGVTVR 155
Query: 98 YK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI-- 152
++ + T NAQ ++ V++VT +HMPR+ + + +P P+
Sbjct: 156 WQEGRSRTTWENAQFSAEVLLPLGIKRVVVVTQAWHMPRSVWSFEHA--GFEVVPAPVGF 213
Query: 153 --ISHDLEENSSIFKIKILR---VLLIEYLKILLLSI 184
+ + + + K + LL E + L +
Sbjct: 214 LGVDNARPLGGWMPEFKSIWQSGQLLNEAVGQLGYRL 250
>gi|313677361|ref|YP_004055357.1| hypothetical protein Ftrac_3275 [Marivirga tractuosa DSM 4126]
gi|312944059|gb|ADR23249.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 239
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 34/215 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFI--SFIR----YVKQMHIPDHPSVSAIVVLTG---------- 45
+Y F I F F+ F++ + + + V+LTG
Sbjct: 23 KYLAILGFALFIIFTNDFLANWFLKAWQTEAANLESIKNQKFTYGVLLTGMTNTLKEPKD 82
Query: 46 ------EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAE-----CCI 94
RI +A L + I + ++ISG + + L + I L +
Sbjct: 83 RVYFNQNADRILQAIMLHQQGIIDTLYISGGGATALRKDLQEARVISNYLESIQFPMDKV 142
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ ++ NT +A+ ASA+ +L++T HMPR ++ + VQ P ++
Sbjct: 143 ILEDQSRNTVESARFASAYISSQ--TEILLITSASHMPRALGCFKKEDFRVQPYPTVFLT 200
Query: 155 HDLEENSSIFKIKI-----LRVLLIEYLKILLLSI 184
+D N S+F +L E++ I
Sbjct: 201 NDEMINPSMFLPSDDALLKWNILFKEWMGYSAYWI 235
>gi|255019747|ref|ZP_05291824.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
gi|254970815|gb|EET28300.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
Length = 267
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 32/174 (18%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSVSAIVVLTGEP------------ 47
G+ + L +G + ++ + P P V AIVVL G
Sbjct: 44 LLAAGVGLYLSATGVGARWLVLPLENRYPPLLHPQPGVGAIVVLGGGEVARPPGDGGDMA 103
Query: 48 -----IRIERAFELLENQIGEKIFISGVHHS-------VSKDILLQKIPIRQDLAECCID 95
+R+E A +L Q I SG + LL++ + I
Sbjct: 104 NARTLMRLEAAAKL-AKQSALPIVTSGGAPRFGAPPEATTMARLLRESFAVHNP----IW 158
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
I ++ NT NA ++S + H V +VT HMPR +R +P
Sbjct: 159 IEGRSFNTAANAFDSSKLLAQKGIHRVYLVTSALHMPRAMAWFRRAGLDPVPVP 212
>gi|110597465|ref|ZP_01385752.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341009|gb|EAT59480.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 196
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 16/191 (8%)
Query: 4 FWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLE 58
+ L VC IF +GF+ ++ + I+VL G+ R+ + EL
Sbjct: 9 LFALLSVCGAASAIFLTLGFLV------SLYAGNPEKTDVIIVLGGDSGLRVRKGAELYN 62
Query: 59 NQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
+ + ++G+ + ++ I+ + + I + ++ T A A+ E
Sbjct: 63 SGYASHVILTGIDERFYRPAHPNWRERRMIKLGVPKKAIRVDTQSTTTWEEAVNAADTME 122
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
K + ++V+ HM R + S+ +FI K + ++
Sbjct: 123 KKGWKSAIVVSDPPHMLRLHQTWSKAFKGSSKRFILVSTKPEWWRPFVWWKNKKSYQFVI 182
Query: 174 IEYLKILLLSI 184
E K L ++
Sbjct: 183 NEIKKNLYYAV 193
>gi|218437457|ref|YP_002375786.1| hypothetical protein PCC7424_0452 [Cyanothece sp. PCC 7424]
gi|218170185|gb|ACK68918.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 260
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 74/219 (33%), Gaps = 48/219 (21%)
Query: 9 FVCLIFFIMGFISFIRYVKQMH-----IPDHPSVSAIVVLTG----------------EP 47
+I + + Q + P AIV+L G +
Sbjct: 43 LALIILLVASNGWISNQLVQSLEWQNIPSEIPQAEAIVLLGGATKPPAYPRPMVDMSEQG 102
Query: 48 IRIERAFELLENQIGEKIFISGV---------HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ A +L +Q I SG S LLQ + + I
Sbjct: 103 DRVLYAAKLYLDQKAPLIIASGGRIDWLSNEQSESADMANLLQLMGVPP----QVIIQEP 158
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP--YPIISHD 156
+LNT NA ++ VL+VT HMPR+ +++ V P + + +
Sbjct: 159 DSLNTYENATNVKKILQEKGIKQVLLVTSALHMPRSLFIFKKLGIDVIAAPTDFLVSRTE 218
Query: 157 LEENSSIFKIKILRVL------------LIEYLKILLLS 183
LE N+ + IL +L L EY+ +L+ S
Sbjct: 219 LEPNNLTLEGIILNILPSSENLDRTTKALKEYIGLLVYS 257
>gi|23012908|ref|ZP_00052888.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 65.7 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 23/162 (14%)
Query: 28 QMHIPDHPSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISGV 70
+ P V I+VL G R+ L + ++ SG
Sbjct: 70 RAPNPLPEKVDGIIVLGGAINPVVSEARGQVSVGGGVTRMTTLIPLAKRYPEARLVFSGG 129
Query: 71 -----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ + + + I + NT NA + + L++
Sbjct: 130 SGSPFNPELREADYAKIFYDDLGFDTDRIVFERDSRNTRENATLSKELMQPRPGETWLLI 189
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
T HMPR+ + + V IP + L+ +++
Sbjct: 190 TSAGHMPRSVGCFRAVGWPVVPIPVDYYTTGLD-KPWWTELR 230
>gi|119964395|ref|YP_948857.1| hypothetical protein AAur_3158 [Arthrobacter aurescens TC1]
gi|119951254|gb|ABM10165.1| putative uncharacterized DUF218 domain protein [Arthrobacter
aurescens TC1]
Length = 182
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 19/189 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQ 60
R + L C++ ++ I+ + AIVVL G R+ L +Q
Sbjct: 5 RKLAWALTACVLAGVLWLIAAFQLFHNPPRATPQKTDAIVVLGGMSNERLPVGLAL-RDQ 63
Query: 61 IGEKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+G K + +G+ + D + L +C + LNT G A A +
Sbjct: 64 LGIKDLVVVTTGLPANAGSDEFCEAHDGVTHL-DC---LRPDPLNTRGEALRLRDLAAER 119
Query: 118 NFHHVLIVTHDYHMPRTFLELQR-INSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEY 176
+ V +VT DYH+ R +++ I + V + +L + + ++E
Sbjct: 120 GWTSVTVVTSDYHVQRAGTLMKQCIAADVHMVG---TEPELSPVAWV------WRFVVET 170
Query: 177 LKILLLSIQ 185
+L + ++
Sbjct: 171 GGLLDVWVR 179
>gi|300854922|ref|YP_003779906.1| hypothetical protein CLJU_c17410 [Clostridium ljungdahlii DSM
13528]
gi|300435037|gb|ADK14804.1| uncharacterized conserved membrane protein [Clostridium ljungdahlii
DSM 13528]
Length = 204
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 23/159 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIP---DHPSV-------SAIVVL------TGEPI 48
+ L + ++ FI + V ++ P I++L G+P
Sbjct: 6 FIILLKYMAISVLFFIIIVLVVINLYPLLFYKSPETKLKRDRYDVIIILGFPALQDGKPS 65
Query: 49 -----RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R+ +A EL I SG V++ + ++ + C+ K+
Sbjct: 66 PIMRERVIKAVELFNKGYANNIICSGGGVYNKYIEADIMANFAESLGIPNSCLIREDKSR 125
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
NT N Q + E + +IVT +H+ R+ L +
Sbjct: 126 NTYQNIQNSIKIMEDKKWSSAMIVTSPWHLRRSNYFLSK 164
>gi|163852418|ref|YP_001640461.1| hypothetical protein Mext_3001 [Methylobacterium extorquens PA1]
gi|163664023|gb|ABY31390.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 278
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 24/143 (16%)
Query: 33 DHPSVSAIVVLTG--------EPIRI------ERAFEL--LENQIGE-KIFISGV----- 70
D V+ IVVL G +I ERA L L + + ++ SG
Sbjct: 89 DGTPVTGIVVLGGTVEADTSIGRDQITVNEAGERAIALADLARRYPQARLVFSGGAGSTR 148
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+VS+ ++ + + + + ++ NT NA ++ + L+VT +H
Sbjct: 149 EDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWH 208
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ ++ V YP+
Sbjct: 209 MPRSMGCFRKAGFDVT--AYPVD 229
>gi|167620257|ref|ZP_02388888.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
Length = 240
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 91 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 206
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 207 GWL-PRAVNLVNAE 219
>gi|167582098|ref|ZP_02374972.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|257139318|ref|ZP_05587580.1| hypothetical protein BthaA_08969 [Burkholderia thailandensis E264]
Length = 240
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + +
Sbjct: 91 RIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADTYAPYLLARGVANADLIRESSSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R +P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFRRFG----IVPQPVYANRRDARL 206
Query: 162 SIFKIKILRVLLIE 175
+ + ++ E
Sbjct: 207 GWL-PRAVNLVNAE 219
>gi|330816685|ref|YP_004360390.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
gi|327369078|gb|AEA60434.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
Length = 238
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 29/175 (16%)
Query: 26 VKQMHIPDHPSVSAIVVLTGE--------------PIRIERAFELLENQIGEK----IFI 67
V+ + P +AIV+L G RI RA EL I +
Sbjct: 52 VEPVEAPTMRGHTAIVLLGGGIERRRGELVPPHDALSRIVRAAELHSVCQAIASQCDIVV 111
Query: 68 SGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+G +S+ L + +AE + + ++ T NA+ + ++ ++
Sbjct: 112 TGGDPHHHGISEAQLYAPLLREHGVAERDLILETRSRTTYENAKYTAPILLAQHYDATIL 171
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE----ENSSIFKIKILRVLLIE 175
VT Y M R L+ R P P+ ++ L L E
Sbjct: 172 VTSSYQMRRALLDFARF----DIEPQPVYANQLRPILGWRPVWHNFVAASRALHE 222
>gi|226334849|ref|YP_002784521.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226246069|dbj|BAH56169.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 190
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 13/158 (8%)
Query: 1 MRYFWYGLFVCLIFFI----MGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-IRIERAFE 55
MR + V I GFI + + + D SV AIVVL GE R E AF+
Sbjct: 1 MRKIVAAMIVATILICCTAGAGFIVY----NRSAVDDIRSVDAIVVLGGERDGREEFAFD 56
Query: 56 LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAE 115
L + + +S + + + CI T G A A
Sbjct: 57 LARQGLSRNVVLSDPYGPYGTKLAARCETRDPRFTVRCI--PPNPSTTLGEAVFTRNLAT 114
Query: 116 KNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYP 151
N ++ +++V+ YH+PR R V +P P
Sbjct: 115 ANGWNSLMVVSWRYHLPRARYIFSRCLDGRDVLMVPVP 152
>gi|307267183|ref|ZP_07548690.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917799|gb|EFN48066.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 191
Score = 65.7 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLT----GE------PIRI 50
++ W + ++F I+G I + + + I+VL G+ R+
Sbjct: 5 LKIVW---LLLVLFIIIGIILEWQIISFAYNEKPKKSDVIIVLGCAVYGDIPSPFFKARL 61
Query: 51 ERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E A L G I +SG ++S+ + +++ + E I I K+ +T N
Sbjct: 62 EEALRLYNEGYGRYIIVSGGKGPGENISEAEAGKGYLLKKGIPEKAILIDDKSFSTYENL 121
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
Q + +K + +I+++ +H+ R + +R+ F
Sbjct: 122 QFSKEIMDKKSLKRAVIISNKFHLKRASVIAKRVGIEASF 161
>gi|327402034|ref|YP_004342872.1| hypothetical protein Fluta_0024 [Fluviicola taffensis DSM 16823]
gi|327317542|gb|AEA42034.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 255
Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 67/220 (30%), Gaps = 53/220 (24%)
Query: 6 YGLFVCLIFFIMGFIS--FIRYVK--QMHIPDHPSVSAIVVLTG---------------E 46
Y +FF FI F R + I +VLTG
Sbjct: 40 YAAIFIALFFSNTFIYKEFCRQWEIFGTPISQVKHYDVAIVLTGMAEYNNDLQVLSARRG 99
Query: 47 PIRIERAFELLENQIGEKIFIS---------GVHHSVSKDILLQKIPIRQDLAECCIDIG 97
RI + L + ++I IS G+H + +L K I + I
Sbjct: 100 IDRIWQTISLYKAGKIDRILISGDHGYLIDKGLHEATQLKEILVKWGIPEH----VIITE 155
Query: 98 YKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRI-------------N 142
K+ NT NA E+ + N + +L+VT HM R ++
Sbjct: 156 TKSKNTYENAVESQKIVNRLFPNSNAILLVTSGRHMRRARACFNKLGLKCDTYSTDLFTG 215
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLL 182
F +I D+ S LL E + +
Sbjct: 216 PNRSFTFDELIIPDVSTMSDWHS------LLKEMIGYIAY 249
>gi|21673972|ref|NP_662037.1| hypothetical protein CT1146 [Chlorobium tepidum TLS]
gi|21647116|gb|AAM72379.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 196
Score = 65.3 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 60/185 (32%), Gaps = 6/185 (3%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEK 64
F+ + ++ MH IV+L G+ R+ + +L + +
Sbjct: 9 LLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKH 68
Query: 65 IFISGVHHSVSKDIL---LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
+ ++G+ + ++ + + + I + + + A+ S +KN +
Sbjct: 69 VLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKS 128
Query: 122 VLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKI 179
L+V+ HM R + + +F R ++ E K
Sbjct: 129 ALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRFVINELKKN 188
Query: 180 LLLSI 184
+ +
Sbjct: 189 IYYLV 193
>gi|240139755|ref|YP_002964232.1| hypothetical protein MexAM1_META1p3209 [Methylobacterium extorquens
AM1]
gi|240009729|gb|ACS40955.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens AM1]
Length = 265
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 29/179 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHI---PDHPSVSAIVVLTG--------EPI 48
R FV L+F + + ++ D V+ IVVL G
Sbjct: 40 RVLTVASFVGLLFGGLSPLSAWTLAPLENRFPNFIDDGTPVTGIVVLGGTVEADTSIGRD 99
Query: 49 RI------ERAF---ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCI 94
+I ERA +L ++ SG +VS+ ++ + + +
Sbjct: 100 QITVNEAGERAIALADLARRYPQARLVFSGGAGSTREDAVSEAEIVSRYADTLGVPRNRL 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ ++ NT NA ++ + L+VT +HMPR+ ++ V YP+
Sbjct: 160 ILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGFDVT--AYPVD 216
>gi|116249878|ref|YP_765716.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254526|emb|CAK05600.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C+I GF + + + + G R A L + +I +SG
Sbjct: 80 CMIVLGGGFENEVNTARHG-----------IEFNGGADRFIEALRLAQKFPQSRILVSGG 128
Query: 71 HHSVS------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
S+S + P+ + I+ ++ T NA + + L+
Sbjct: 129 DGSISGIYEGDAAASERFFPLFGVGRDRLIE-ERQSRTTFENAVNTKEFLASQGLSNCLL 187
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
+T +HMPR+ +++ + +P+P
Sbjct: 188 ITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|167836831|ref|ZP_02463714.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 57/157 (36%), Gaps = 19/157 (12%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN--QIGEK--IFISGVHH---SVSKDI 78
+++ P A+ RI++ EL + ++ + +SG +++
Sbjct: 75 IRRRDGAAVPPRDAL-------ARIDKTAELYSACQRTAKRCTVVVSGGDPQMRGITEAD 127
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ + +A + + T NA+ ++ +++VT Y M R L+
Sbjct: 128 TYAPYLLARGVAHADLIRERSSHTTYENARFTVPILRAQHYDDLILVTSSYQMKRALLDF 187
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+R +P P+ ++ + + ++ E
Sbjct: 188 ERFG----IVPQPVYANRRDAQLGWL-PRAANLVNAE 219
>gi|237812033|ref|YP_002896484.1| hypothetical protein GBP346_A1775 [Burkholderia pseudomallei
MSHR346]
gi|237506357|gb|ACQ98675.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARP 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|167902941|ref|ZP_02490146.1| hypothetical protein BpseN_11835 [Burkholderia pseudomallei NCTC
13177]
Length = 240
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRSIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARP 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|241207055|ref|YP_002978151.1| hypothetical protein Rleg_4373 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860945|gb|ACS58612.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 28/151 (18%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C+I GF + + + + G R A L + +I +SG
Sbjct: 80 CMIVLGGGFENEVNTARHG-----------IEFNGGADRFIEALRLAQKFPQSRILVSGG 128
Query: 71 H---------HSVSKDILLQKIPI-RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ + + + R L E ++ T NA +
Sbjct: 129 DGSMSGIYEGDAAASERFFPLFGVGRDRLIE-----ERQSRTTFENAVNTKEFLASQGLS 183
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ L++T +HMPR+ +++ + +P+P
Sbjct: 184 NCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|218531176|ref|YP_002421992.1| hypothetical protein Mchl_3226 [Methylobacterium chloromethanicum
CM4]
gi|218523479|gb|ACK84064.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 265
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 2 RYFWYGLFVCLIFFIMG--FISFIRYVKQMHI---PDHPSVSAIVVLTG--------EPI 48
R FV L+ + + ++ D V+ IVVL G
Sbjct: 40 RVLTVAGFVGLLVAGLSPLSAWTLAPLENRFPSFTDDGTPVTGIVVLGGTVEADTSIGRD 99
Query: 49 RI------ERAF---ELLENQIGEKIFISGV-----HHSVSKDILLQKIPIRQDLAECCI 94
+I ERA +L ++ SG +VS+ ++ + + +
Sbjct: 100 QITVNEAGERAIALADLARRYPQARLVFSGGSGSTREDAVSEAEIVSRYADTLGVPRNRL 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
+ ++ NT NA ++ + L+VT +HMPR+ ++ V YP+
Sbjct: 160 ILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRKAGFDVT--AYPVD 216
>gi|307150072|ref|YP_003885456.1| hypothetical protein Cyan7822_0130 [Cyanothece sp. PCC 7822]
gi|306980300|gb|ADN12181.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 278
Score = 65.3 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 68/242 (28%)
Query: 9 FVCLIFFIMGFISFIRYVKQMH-----IPDHPSVSAIVVLTG----------------EP 47
+I + G + Q + P+ AI+VL G +
Sbjct: 43 LALIIILVAGNEWVSNGLIQSLEWQNIPQNIPNAEAIIVLGGATKSASFPRPMVDLNEQG 102
Query: 48 IRIERAFELLENQIGEKIF----------------ISGVHHSVSKDI---------LLQK 82
R+ A +L ++ I +SGV +S LL
Sbjct: 103 DRVVYAAKLYQDHKAPLIIASGGRIKWGGQQVTDKLSGVGNSFRTQQQPESADIATLLTL 162
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + I +LNT N + VL+VT HMPR+ L ++
Sbjct: 163 MGVPPSA----ILQDSTSLNTYENVVNVKKILNEKGIKRVLLVTSALHMPRSLLIFKK-- 216
Query: 143 STVQFIPYP----IISHDLEENSSIFKIKILRVL------------LIEYLKILLLSIQL 186
+ IP P + +LE++ + +L ++ L EY+ +++ ++
Sbjct: 217 QGIDVIPAPTDFLVSQPELEQSDLSVETIMLNLIPDAGRLEGTTKALKEYIGMVIYRLKG 276
Query: 187 SL 188
L
Sbjct: 277 WL 278
>gi|190889771|ref|YP_001976313.1| hypothetical protein RHECIAT_CH0000139 [Rhizobium etli CIAT 652]
gi|190695050|gb|ACE89135.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 262
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 17/117 (14%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPI-RQDLAECCI 94
G R A L + +I +SG + + + I R L E
Sbjct: 103 GGADRFVEALRLAQKFPQSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRDRLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ETQSRTTFENAVNTRDFLAGQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP-SVSAIVVLTGEPI-RIERAFELLENQ 60
+ G+ + + ++G +S+ + + I + P I+V G+ R RA ELL
Sbjct: 7 IIFIGVVIVFMCLVIG-VSYPIIINNLIIDEGPVQSDVIIVPEGQEYVRAYRAAELLHEG 65
Query: 61 IGE--KIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+I +S + + ++ + Q+ I KA +T NA E++
Sbjct: 66 FSTSGQIIVSPIDKAT--VQGYKEFWVSQEQ----IIPETKATSTYENAVITLRMMEEHG 119
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQF 147
F +IV+ DYHM RT L +RINS F
Sbjct: 120 FDSAIIVSSDYHMRRTKLIYERINSDYDF 148
>gi|219872211|ref|YP_002476586.1| hypothetical protein HAPS_2205 [Haemophilus parasuis SH0165]
gi|219692415|gb|ACL33638.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 201
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ I D+ S AIV+L+G R+ A L+ + G + I+G
Sbjct: 22 DNLSIEDYKSAQAIVLLSGGLRDSKELFGKLAISEIALERVRYA-AFLQKETGLPLLITG 80
Query: 70 VHH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+V K L Q I + KA T NA+ + EK + ++
Sbjct: 81 SSPKGTSEAAVMKKELEQFFHIPTQW------LEEKAKTTAENAKFSKPILEKEGINKIV 134
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + +R
Sbjct: 135 LVTNQWHMQRARMLFER 151
>gi|330811913|ref|YP_004356375.1| hypothetical protein PSEBR_a4949 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380021|gb|AEA71371.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 253
Score = 64.9 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 36/177 (20%)
Query: 10 VCLIFFIMGF--------ISFIRYVKQMHIPDHP--------SVSAIVVLTGEPIRIE-- 51
+C + GF + + + P AIVVL R +
Sbjct: 37 LCFAVGLGGFWLMSLPVVVQWSAKALEREPPLLRSEWATLAQRADAIVVLGSGRERGDLA 96
Query: 52 ------RAFELLENQIGEKIF-ISGVHHSVSKDILLQKIPIRQDLAECCIDIGY------ 98
L + ++ +SG+ + + P L + +
Sbjct: 97 WGADQPTGVGLERQRYAARLAKVSGLPVLTTGGLHYGTPPSEAKLMADSMLDDFGVNVRW 156
Query: 99 ---KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ T NAQ ++ V+++T +HMPR+ +R + +P P+
Sbjct: 157 QEGRSRTTWENAQMSAEILLPEGIKRVVVITQAWHMPRSVWSFERA--GFEVVPAPV 211
>gi|56476276|ref|YP_157865.1| hypothetical protein ebA1532 [Aromatoleum aromaticum EbN1]
gi|56312319|emb|CAI06964.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 37/182 (20%)
Query: 12 LIFFIMGFISFIR----YVKQMHIPDHPSVSAIVVL-----------------TGEPIRI 50
+ F ++GF +F R V + +P AIVVL G R+
Sbjct: 50 IAFSLVGFDNFARSPWPQVPERIALPYPRAEAIVVLGAGRYLQAPEYDGDTAAAGSLERV 109
Query: 51 ERAFELLENQIGEKIFISGVHH----SVSKDILLQ-----KIPIRQDLAECCIDIGYKAL 101
A +L G I +SG + S+ ++Q + + E +
Sbjct: 110 RYAAKLYRE-TGLPILVSGGRPGDIGTRSEAEIMQDILEQEFHVPVRWVE------PDSE 162
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
+T+ NA+ ++A + +VTH +H+ R + + V + + +
Sbjct: 163 DTQQNAERSAALLRAEGVTCIYLVTHGFHIDRAAAQFHKHGLEVVPMATGFVRPQPDTVL 222
Query: 162 SI 163
S
Sbjct: 223 SW 224
>gi|219855730|ref|YP_002472852.1| hypothetical protein CKR_2387 [Clostridium kluyveri NBRC 12016]
gi|219569454|dbj|BAH07438.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 199
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RIERAF 54
+ L+ ++ F++ I+ I+ + I+VL G R+ +
Sbjct: 10 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVL-GCRVYGSTPSPFLIWRLNKGL 68
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
EL + G+ I +SG ++S+ ++ + + + + + K+++T N +
Sbjct: 69 ELYDKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSK 128
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
E+ +IV++ YH+ R L
Sbjct: 129 RVMEEKGLKTAVIVSNKYHLKRASL 153
>gi|153955310|ref|YP_001396075.1| hypothetical protein CKL_2692 [Clostridium kluyveri DSM 555]
gi|146348168|gb|EDK34704.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 196
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTG----EPI-------RIERAF 54
+ L+ ++ F++ I+ I+ + I+VL G R+ +
Sbjct: 7 FVLYFIIVIFLLALITEIQIIYFGENAKPKKSDCIIVL-GCRVYGSTPSPFLIWRLNKGL 65
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
EL + G+ I +SG ++S+ ++ + + + + + K+++T N +
Sbjct: 66 ELYDKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSK 125
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFL 136
E+ +IV++ YH+ R L
Sbjct: 126 RVMEEKGLKTAVIVSNKYHLKRASL 150
>gi|300690675|ref|YP_003751670.1| hypothetical protein RPSI07_1014 [Ralstonia solanacearum PSI07]
gi|299077735|emb|CBJ50373.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum PSI07]
Length = 190
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 11/153 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHH--SVSKDILLQKIPIRQDLAEC 92
IVVL GE R+ A EL + ++F+SG + + +++ +P + EC
Sbjct: 45 HADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSGEGDCLLIVRRLVMAGVPADRIGHEC 104
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ +T GNA+ ++VT YH R +++ V + +
Sbjct: 105 ------ESGSTMGNAEMTHRALTGQPVRSAVLVTSWYHTGRALEVFRQVWPEVTWGARGV 158
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
D S +L EY+K +++
Sbjct: 159 FPGDTLAKSFPIYESGS--ILAEYIKRAWYAVR 189
>gi|238927939|ref|ZP_04659699.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
gi|238884272|gb|EEQ47910.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
Length = 253
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 26/147 (17%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIER-----AFELLENQIGEKIF--------------I 67
+ +P+ P I++L G I +L ++ +
Sbjct: 68 RTYPVPEVPQGDVIIMLGGGA--IADVQDVDGMGMLAQSPSSRLLAAYRLHLRTHLPILL 125
Query: 68 SG--VHHSV-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
SG V S+ + +++ + + I + ++L T NA + + H ++
Sbjct: 126 SGGQVFSDTGSEAEIARRVLRSLGVPDEMIRVETRSLTTGQNAHYTAEILRREGLMHPIL 185
Query: 125 VTHDYHMPRTFLELQRINSTVQFIPYP 151
VT +H+PR L ++ + PYP
Sbjct: 186 VTSAFHLPRAVLNFEK--QGITVTPYP 210
>gi|254562167|ref|YP_003069262.1| hypothetical protein METDI3773 [Methylobacterium extorquens DM4]
gi|254269445|emb|CAX25411.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens DM4]
Length = 265
Score = 64.9 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)
Query: 33 DHPSVSAIVVLTG--------EPIRI------ERAF---ELLENQIGEKIFISGV----- 70
D V+ IVVL G +I ERA +L ++ SG
Sbjct: 76 DGTPVTGIVVLGGTVEADTSIGRDQITVNEAGERAIALADLARRYPQARLVFSGGAGSTR 135
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
+VS+ ++ + + + + ++ NT NA ++ + L+VT +H
Sbjct: 136 EDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWH 195
Query: 131 MPRTFLELQRINSTVQFIPYPII 153
MPR+ ++ V YP+
Sbjct: 196 MPRSMGCFRKAGFDVT--AYPVD 216
>gi|182678647|ref|YP_001832793.1| hypothetical protein Bind_1673 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634530|gb|ACB95304.1| protein of unknown function DUF218 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 284
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 39/218 (17%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHP----SVSAIVVLTGE----------- 46
R + + + F +F+ + P+ + I+VL G
Sbjct: 40 RLQAIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPAGIIVLGGGMDSRESKARGV 99
Query: 47 ------PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQDLAE 91
R+ EL K+ +G S+ L Q + + +
Sbjct: 100 PILNTAGSRMTAGVELSRLFPQAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQM- 158
Query: 92 CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI--P 149
+ NT NA + L+VT HMPR+ +++ V
Sbjct: 159 ---VFEGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNAN 215
Query: 150 YPIISHDLEENSSIFKIKILRVL---LIEYLKILLLSI 184
Y I + + + LR+L L E++ +L +
Sbjct: 216 YMTIGDARDWSVTTLAHDRLRMLSFGLREWIGLLAYRL 253
>gi|34558162|ref|NP_907977.1| hypothetical protein WS1867 [Wolinella succinogenes DSM 1740]
gi|34483881|emb|CAE10877.1| hypothetical protein WS1867 [Wolinella succinogenes]
Length = 214
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 24/172 (13%)
Query: 33 DHPSVSAIVVLTGE--PIRIERAFELLENQIGEKIFISGV-------------HHSVSKD 77
AI+VL G R+ A LL+ + ++ V H S
Sbjct: 36 AQRGADAILVL-GGNKSSRLPHAISLLKAGYAPLLLVTEVKRYSNQTFDGLLRHESDEVV 94
Query: 78 ILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
+L + + L + A +T A + A+A+ +N ++IVT +H R
Sbjct: 95 HILSSLHLPHHLIP---SLKGGATSTYDEAYDFFAYAKDSNIRSIIIVTDAFHTRRALGA 151
Query: 138 LQRINS-----TVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSI 184
++ +Q P + E L+ ++E +K L I
Sbjct: 152 FLKVQRRLQEEKIQIQISPAPNTHFNEKDWYLTEAGLQAYILEGIKTFLYLI 203
>gi|317968461|ref|ZP_07969851.1| hypothetical protein SCB02_02886 [Synechococcus sp. CB0205]
Length = 266
Score = 64.5 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 24/149 (16%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGE----------------PIRIERAFELLENQIGEKIFI 67
+ P+ A+VVL G R+ L+ + +
Sbjct: 65 ERAAALTPKTIPNADAVVVLGGGLKPALPPRRGVEVSEGGDRLLTGVRLMSQKKAGTLVT 124
Query: 68 SGV-------HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
SG + ++ + + + I + T A++ A++ +
Sbjct: 125 SGAQISFTAADPAPAEAFSAKALAEELGVPSQRIVPNPLSKTTAEEARDIGQLAKQRGWS 184
Query: 121 HVLIVTHDYHMPRTFLELQRINSTVQFIP 149
VL+VT +HMPR+ QR + +Q IP
Sbjct: 185 QVLLVTSAFHMPRSLATFQRRS-GLQVIP 212
>gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021]
gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 335
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 26/175 (14%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 113 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 172
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDI 96
R L + +I +SG S+S + + +
Sbjct: 173 ELNQAAERFVETLRLAQAYPQARILVSGGDGSLSGIYEGDAHASENFFGTFGIGSDRLIR 232
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 233 EGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 285
>gi|90421278|ref|ZP_01229163.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334463|gb|EAS48266.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 211
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 24/167 (14%)
Query: 25 YVKQMHIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFI 67
V + + D + + I+VL G R+ EL + K+
Sbjct: 44 SVIRAVVLDRRARNGIIVLGGAFDTRVARTRGMNELNDAADRVTAGMELAQRYPKAKLLF 103
Query: 68 SGV-----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHV 122
SG + + + + LA + + +A +T NA A A+
Sbjct: 104 SGGVAALLEEDIPETEAAEALYRGLGLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVW 163
Query: 123 LIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKIL 169
++VT HMPR + +PYP+ +
Sbjct: 164 VLVTSASHMPRAVGCFRVA--GFDIVPYPVDYRTPSGPALWRPSSTT 208
>gi|21673458|ref|NP_661523.1| hypothetical protein CT0624 [Chlorobium tepidum TLS]
gi|21646562|gb|AAM71865.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 257
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 22/160 (13%)
Query: 28 QMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV-- 70
++ + AIVVL+G R E +L + + +G
Sbjct: 63 RVPVEQVRKADAIVVLSGMLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGGQM 122
Query: 71 --HHS-VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW--AEKNNFHHVLIV 125
V + LL + + I + NT G A + +++V
Sbjct: 123 PWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRIILV 182
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
T +HM R + V+ P + DL+ +++
Sbjct: 183 TSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLD 222
>gi|33240920|ref|NP_875862.1| hypothetical protein Pro1471 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238449|gb|AAQ00515.1| Uncharacterized conserved protein with signal peptide
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 241
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 28/189 (14%)
Query: 6 YGLFVCLIFFIMGFIS-----FIRY-VKQMHIPDHPSVSAIVVLTGE------------- 46
+F+ L F +G +S F+ + +++ P+ AIVVL+
Sbjct: 24 LSIFIFLWTFSIGLVSQMLWKFVEHPWQRIDESHAPTADAIVVLSSGGRSLAPGISNIIE 83
Query: 47 ---PIRIERAFELLENQIGEKIFISGVHHSVSKD-----ILLQKIPIRQDLAECCIDIGY 98
P R +L + + K+F +G K L ++ I + + I
Sbjct: 84 WNDPDRFLAGVKLFKEKKAPKLFFTGGASPYRKALKTEGDLYKEEAISLGIPKKAISTTG 143
Query: 99 KALNTEGNAQEASAWAEKNNFHH-VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDL 157
+ NT A + + +L+VT +HM R + +R VQ P +
Sbjct: 144 RVFNTAEEAFQIRRNIKDKGSPSKILLVTSAFHMQRAKRQFERQGFIVQPFPVDFKTERK 203
Query: 158 EENSSIFKI 166
+
Sbjct: 204 FRKTYWKNP 212
>gi|315652448|ref|ZP_07905435.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485286|gb|EFU75681.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 365
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 25/198 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
+ Y + F+M + +HI + + I+VL RI
Sbjct: 144 LVYKMLSFIFIYLLFLMAMYCISAILNLIHIGRNKKLDYIIVLGAGIKGKRVTPLLAGRI 203
Query: 51 ERAFELLENQIGEKIFISGV-HHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNA 107
++ ELL+ K+ +SG + ++ +++ I I K+ NT+ N
Sbjct: 204 DKGIELLKYNPNAKLILSGGMGPGEDIPEGVAMADYAKQKGVSDEKIIIEDKSKNTKENL 263
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK 167
+ + N + IVT YH+ R + +++ + I Y +
Sbjct: 264 LFSYKLIDNKN-SKIAIVTTSYHVFRALVFAKKL--NIPCIGYGSKT---------KWYF 311
Query: 168 ILRVLLIEYLKILLLSIQ 185
L L+ EY+ L +S +
Sbjct: 312 TLNALIREYIGYLSISYR 329
>gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 262
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 26/175 (14%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 40 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSK-----DILLQKIPIRQDLAECCIDI 96
R L + +I +SG S+S + + +
Sbjct: 100 ELNQAAERFVETLRLAQAYPQARILVSGGDGSLSGIYEGDAHASENFFGTFGIGSDRLIR 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 160 EGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 212
>gi|218509953|ref|ZP_03507831.1| hypothetical protein RetlB5_22095 [Rhizobium etli Brasil 5]
Length = 262
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPI-RQDLAECCI 94
G R A L + +I +SG + + + I R+ L E
Sbjct: 103 GGADRFVEALRLAQKFPDSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRERLIE--- 159
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 160 --ETQSRTTFENAVNTREFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|194336436|ref|YP_002018230.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308913|gb|ACF43613.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 196
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 9/193 (4%)
Query: 1 MRYF---WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFEL 56
MR F F+ L +S + + H D I+VL G+ R+ + EL
Sbjct: 1 MRLFVKITLIFFLSLTTAAALLLSCLGILVSQHAADPEKCDVIIVLGGDNGLRVRKGAEL 60
Query: 57 LENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ ++G+ S ++ I + + I I K+ T A+ S
Sbjct: 61 YNAGYASHVILTGIDERFYRPSHPNWRERRMIALGVPKKAIKIDTKSKTTWEEAENTSNT 120
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRV 171
EK + +IV+ HM R R S+ FI + + +
Sbjct: 121 MEKKGWKSAIIVSDPPHMLRLHQTWNRAFKGSSKTFILVSTTPSWWDRVLWWKNRQSYQF 180
Query: 172 LLIEYLKILLLSI 184
++ E K L +
Sbjct: 181 VISEIKKNLFYAA 193
>gi|261252465|ref|ZP_05945038.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
gi|260935856|gb|EEX91845.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
Length = 267
Score = 64.5 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG VS ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRVMRIYPGSKLILSGYAGGSEVSNARMMAKVALSLGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ +++VT HM R E PYP ++ L +N+
Sbjct: 165 WEEARQAAAFVTTKK---LVVVTSASHMKRALNEFHSAGMD----PYPAPTNYLAQNN 215
>gi|325917198|ref|ZP_08179425.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
gi|325536588|gb|EGD08357.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
Length = 183
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 18/141 (12%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFELL 57
L + + + +I ++ Q I+VL RI A +L
Sbjct: 2 LALIWLVAVAAWIVWVGDRDQAAP-----ADVIIVLGAAAYDARPSPVFEERIRHALDLY 56
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ +G ++ + ++ +R + I I + T N +A A
Sbjct: 57 GQGYAPRLLFTGGFGNGARFAESQVARRYALRHGVPPEAIVIETSSRTTRQNLLQARALM 116
Query: 115 EKNNFHHVLIVTHDYHMPRTF 135
E++ H +IV+ HM R
Sbjct: 117 ERHGMHRAIIVSDPLHMARAL 137
>gi|166368105|ref|YP_001660378.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
gi|166090478|dbj|BAG05186.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
Length = 207
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 12/156 (7%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIF 66
L + LI I+G++ ++Q AI VL G R A +L + I+
Sbjct: 26 LLAIPLILAILGWL--YHDLRQ----QWLKPEAIFVLGGHADRERFAAKLAKEYPDLPIW 79
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
+S + +K I + + Y A +T N + + V +VT
Sbjct: 80 VSSGSPRRYVRKIFKKAGIPPERLH----LDYNARDTVTNFTSLADQLKAQGIDSVYLVT 135
Query: 127 HDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
D HM R L E+ + + P + S E
Sbjct: 136 SDNHMRRARLVGEIVFGSRGIMIKPVTVPSQSPPEP 171
>gi|237746467|ref|ZP_04576947.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377818|gb|EEO27909.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 203
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 21/149 (14%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IR 49
+R F+ + + F + + A ++L G R
Sbjct: 5 LRILVIAAFLFVAYIFCSIALFS------TVDQKKTADAAIIL-GAAAWYKRPSPVFEER 57
Query: 50 IERAFELLENQIGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I L EN K+ ++G S+ + ++ + + E I I + T N
Sbjct: 58 IRHGLWLYENGYVRKLILTGGKSKNAPYSEAFVARRYALSHAIPENDILIEEASQTTREN 117
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A A + N LIV+ HM R
Sbjct: 118 LLNAKAIMQANGLSTALIVSDPIHMKRAM 146
>gi|186685641|ref|YP_001868837.1| hypothetical protein Npun_R5589 [Nostoc punctiforme PCC 73102]
gi|186468093|gb|ACC83894.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 176
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 36 SVSAIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
A+VVL G R+ER E + I+I+G S Q++ + +
Sbjct: 22 QPQAVVVLGGSTRRLEREKFTAEFVRQHPNIPIWITGG----SPPRFTQRVFTKAGVDPK 77
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPY 150
+ + Y+A++T N + V ++T D+HM R E+ + + P
Sbjct: 78 RLHLDYEAVDTVTNFTTLVDDLQARGIKSVYLITSDFHMRRACVIGEIILGSRGIYLKPV 137
Query: 151 PIISHDLEEN 160
P+ S E+
Sbjct: 138 PVPSEKPPES 147
>gi|170749150|ref|YP_001755410.1| hypothetical protein Mrad2831_2743 [Methylobacterium radiotolerans
JCM 2831]
gi|170655672|gb|ACB24727.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 281
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 43/223 (19%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFI----------RYVKQMHIPDHPSVSAIVVLTGEPIRI 50
R+ GL + L+ F++G + D P+ + I+VL G I
Sbjct: 34 RWRRSGLGLALLGSFLLGAAGLAPLSDVALIPLEQRFPAYPDDGPAPTGIIVLGGG---I 90
Query: 51 ERAF--------------------ELLENQIGEKIFISG----VHHSVSKDILLQKIPIR 86
E +L ++ SG + +++ ++ +
Sbjct: 91 EAGLSEARRQIVVNDAGERPIYLGDLARRYPAARLVFSGGSGFIAGGMAEADIVSRQADV 150
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ + + ++ NT NA ++A + L+VT +HMPR ++ V
Sbjct: 151 IGVPRTRLILENRSRNTHENAAFSAALVKPKPGERWLLVTSAWHMPRAVGCFRQAGFAVD 210
Query: 147 FIPYPIISHDLEENSSIFKIKILRVL-----LIEYLKILLLSI 184
P + + + +L + E++ ++ +
Sbjct: 211 AFPVDYRTRGWSDVAHFHGFASDGLLQFDLAVKEWIGLVAYRL 253
>gi|254504841|ref|ZP_05116992.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440912|gb|EEE47591.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 268
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 69/229 (30%), Gaps = 49/229 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM------HIPDHPSVSAIVVL--------TGEP 47
R+ W G +I GF + Q + S + +++L TG
Sbjct: 41 RFIWVGALGLVI---CGFSPAANLLIQPLEDRFSRPAELGSFNGVIILGGAVDTVVTGAR 97
Query: 48 I---------RIERAFELLEN----------QIGEKIFISGVHHSVSKDILLQKIPIRQD 88
R+ A L + G I+G ++ ++
Sbjct: 98 GETALTVSGERLTIAARLAKQLPEALIIHTGGQGT--IITG---QATESEGASRLFDDFG 152
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFI 148
+A I + ++ NT NA + L+VT YHMPR+ +
Sbjct: 153 IASQRIILEDESRNTWENAVLTKELVDPKPGQTWLLVTSAYHMPRSMGVFEAAG-WTGVT 211
Query: 149 PYPIISHDLEENSSI----FKIKILRVL---LIEYLKILLLSIQLSLST 190
YP+ K LR L + E++ + + + S
Sbjct: 212 AYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIGLTVYWMTGRSSA 260
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 34/185 (18%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP---------- 47
+ +F+++ + + P + + AI++L G
Sbjct: 10 LAVCTAALFWLLAAGWLTAPLLHLAQPRSQTDAPARFAPRTAIIMLGGGTVYDDNHVLVP 69
Query: 48 -----IRIERAFELLEN-QIGE---KIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RI + + + E + +SG + S ++ +RQ + I
Sbjct: 70 PRDVLARITASAQNYAACKRAEATCHVIVSGGNPQRHSATEADTYLPYLLRQQVPRADIV 129
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ + T NA+ SA E + + +++VT Y MPR L+ R F P P+IS+
Sbjct: 130 LENSSRTTYENARNVSAILEGSRYDSLILVTSAYQMPRAMLDFHRFG----FAPQPMISN 185
Query: 156 DLEEN 160
Sbjct: 186 ARRAR 190
>gi|260779195|ref|ZP_05888087.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605359|gb|EEX31654.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
Length = 267
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG VS ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRIMRIYPGSKLILSGYAGGSEVSNARMMAKVALALGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
A++A+A+ ++ +++VT HM R E PYP ++ L +
Sbjct: 165 WEEARQAAAFVKRKK---LVVVTSASHMKRALNEFHSAG----LKPYPAPTNYLAHD 214
>gi|317064197|ref|ZP_07928682.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689873|gb|EFS26708.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI+ISG S+ + ++ + + I I K+
Sbjct: 91 GANARIIKTAQFY-NKYPKKIYISGGSPLQNKESESSVYKRELVALGIPSENIVIEEKSR 149
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN- 160
NT NA E + +++T +H+PR+ + F P P +E
Sbjct: 150 NTRENALYIRKMMEGSKEKKAVLITSAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAE 209
Query: 161 ------SSIFKIKILRVLLIEYLKILLLSIQ 185
K L +LL EY+ +L I+
Sbjct: 210 NFFDYIPEYTNFKKLGILLKEYIGMLYYRIR 240
>gi|257469971|ref|ZP_05634063.1| hypothetical protein FulcA4_11568 [Fusobacterium ulcerans ATCC
49185]
Length = 252
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI+ISG S+ + ++ + + I I K+
Sbjct: 102 GANARIIKTAQFY-NKYPKKIYISGGSPLQNKESESSVYKRELVALGIPSENIVIEEKSR 160
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN- 160
NT NA E + +++T +H+PR+ + F P P +E
Sbjct: 161 NTRENALYIRKMMEGSKEKKAVLITSAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAE 220
Query: 161 ------SSIFKIKILRVLLIEYLKILLLSIQ 185
K L +LL EY+ +L I+
Sbjct: 221 NFFDYIPEYTNFKKLGILLKEYIGMLYYRIR 251
>gi|229592788|ref|YP_002874907.1| hypothetical protein PFLU5409 [Pseudomonas fluorescens SBW25]
gi|229364654|emb|CAY52578.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 253
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 24/157 (15%)
Query: 36 SVSAIVVLTGEPIRIE--------RAFELLENQIGEKI--------FISGV-HHSVSKDI 78
AIVVL R + L + ++ +G H+
Sbjct: 79 RADAIVVLGSGRERGDPAWGTDQPTGIGLERQRYAARLAKASGLPVLTTGGLHYGTPPSE 138
Query: 79 LLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
QD + ++ T NAQ ++ V++VT +HMPR+
Sbjct: 139 AALMAVSMQDDFGVTVRWKEERSRTTWENAQMSAEILLPEGIKRVVVVTQAWHMPRSVWS 198
Query: 138 LQRINSTVQFIPYPI----ISHDLEENSSIFKIKILR 170
++ +P P+ + + + + K +
Sbjct: 199 FEKA--GFTVVPAPVGFLGVDNARPLGGWMPEFKSVW 233
>gi|148241344|ref|YP_001226501.1| hypothetical protein SynRCC307_0245 [Synechococcus sp. RCC307]
gi|147849654|emb|CAK27148.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 186
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIR 86
++ P P I+VL G+ R ++A L + G + Q +
Sbjct: 22 PRLLEPWMPPPQMILVLGGDVEREKQAAALARQSNLPVLITGGSNP-----EYAQWVFEG 76
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NST 144
Q + + + Y A +T N + HVL+VT HM R L + + +
Sbjct: 77 QGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIRHVLLVTSSDHMDRALLVGRVVAGSRG 136
Query: 145 VQFIPYPIISHD--LEENSSIFKIKILRVLL 173
+ P P+ D E S +R L+
Sbjct: 137 IHLTPVPVPCGDDCRPERRSKVWGDGVRALV 167
>gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073]
gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC
39073]
Length = 461
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 23/193 (11%)
Query: 8 LFVCLIFFIMG-FISFIRYVKQMHIPDHPSVSAIVVL-----TGEPI-----RIERAFEL 56
+F LI I+G +I + P I+VL P RI A L
Sbjct: 10 IFAALITLILGSTYWYIEWFGWNTAP--KRADVIIVLGAAVWANGPSPALMERITLAETL 67
Query: 57 LENQIGEKIFISG-VHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAW 113
+ + +G + S +++ I + I + NT N A
Sbjct: 68 YQQVYAATLITTGGIGRSNPTPEGSAARQVLISHGIPANVIYEEVTSSNTRENLVGALNI 127
Query: 114 AEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
K+ + +IVTHD+H+ R E +R+ + + E + +LR ++
Sbjct: 128 MRKHGWKSAVIVTHDFHLLRAMTEARRLGIE-------VSGAGVHETAMFRPPLVLREVI 180
Query: 174 IEYLKILLLSIQL 186
+K + ++Q+
Sbjct: 181 ANLVKAIGYNLQM 193
>gi|168183333|ref|ZP_02617997.1| putative sanA protein [Clostridium botulinum Bf]
gi|237793971|ref|YP_002861523.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
gi|182673423|gb|EDT85384.1| putative sanA protein [Clostridium botulinum Bf]
gi|229261043|gb|ACQ52076.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
Length = 222
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R + + LI + FI F + ++ D P AI+VL G
Sbjct: 7 RILMVIIVIALIGTAAIFFIDFKVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|325661886|ref|ZP_08150507.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471864|gb|EGC75081.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 241
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPI------------R 49
W + + FI F+ F V M + I+VL R
Sbjct: 54 WLQYILLTLNFIAYFVFFAVQVIICSAMLTLPPKKLDVIIVL--GAQVRGKKITNSLKRR 111
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++R E L+ ++ +SG V++ + + + +AE I + K+ NT N
Sbjct: 112 LDRGIEYLKENPETRVVVSGGQGKGEDVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYEN 171
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + + + IV++++H+ R+ L
Sbjct: 172 LKYSALLVDSMD-DRIGIVSNNFHIYRSLL 200
>gi|87301819|ref|ZP_01084653.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
gi|87283387|gb|EAQ75342.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
Length = 194
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 23/180 (12%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISG 69
+ ++ + G + + + HP + I+VL G+ R + A L G + +SG
Sbjct: 4 LLVMALLAGALIVVGRGLLLPSLGHPQL--ILVLGGDIEREKLAGRLAHRD-GLPLLVSG 60
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ L + + + + Y+A +T GN ++ HHVL+VT
Sbjct: 61 GSNPEYAQWLFSQEGLDRRQFR----LDYRARDTLGNFTTVVDDLKRLGIHHVLLVTSSD 116
Query: 130 HMPRTFL--ELQRINSTVQFIPYPII--------------SHDLEENSSIFKIKILRVLL 173
HM R L + + + P + L + + + LR
Sbjct: 117 HMDRALLVGRIVAGSRGIHLTPVAVPCGDRCLPEGRRKVWGDGLRAAAWVLTGRDLRSWA 176
>gi|160881431|ref|YP_001560399.1| hypothetical protein Cphy_3306 [Clostridium phytofermentans ISDg]
gi|160430097|gb|ABX43660.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 189
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 40 IVVLTGE--PIRIERAFELLENQIGEKIFISGVHHSV-----SKDILLQKIPIRQDLAEC 92
I+++ G P +E+A +LLE + + I SG + ++ L+ I I++ ++
Sbjct: 23 IILIPGGSHPQLMEKAVDLLEMGMAKYILPSGGKNKKLPDYPNEADFLKTIAIKRGISSD 82
Query: 93 CIDIGYKALNTEGNAQEASAWAEKN--NFHHVLIVTHDYHMPRTFLELQRINS-TVQFIP 149
I KA NT NA + + V++V YH R Q++ F
Sbjct: 83 IIICENKATNTYENALFSYELLMGKCIDITKVILVCKAYHSRRALFSYQKVFPANTTFFV 142
Query: 150 YPI-ISHDLEENSSIFKIKILRVLLIEYLK 178
P+ + + + + + + +++ E K
Sbjct: 143 CPVTDNRGITKENWFTRNDYIELIMREVEK 172
>gi|260459193|ref|ZP_05807448.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259034747|gb|EEW36003.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 265
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 37/188 (19%)
Query: 29 MHIPDHPSVSAIVVLTGEPIRIERAFELLENQI-----GEKIF---------------IS 68
P V IVVL G E A L G+++ +S
Sbjct: 70 ARPPLPQKVDGIVVLGGGF---EGAINLTRGGYELSSSGDRMVETAILARRFPQAKVVVS 126
Query: 69 GVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
G + ++ ++ + + K+ NT NA + E L
Sbjct: 127 GGNGSLFLDGEGDADTAPRLLGPLGVSADRLVLEDKSRNTYENAVFSRKLVEPKPGETWL 186
Query: 124 IVTHDYHMPRTFLELQRINSTVQFIPYPII-------SHDLEENSSIFKIKILRVLLIEY 176
+VT +HMPR + +P+P+ L +++ ++ + + E+
Sbjct: 187 LVTSAFHMPRAKALFDKA--GFPTVPWPVDYRTSGKEGVGLFRDNAADSLENTTMAIREW 244
Query: 177 LKILLLSI 184
+ + +
Sbjct: 245 IGLFAYWL 252
>gi|186476497|ref|YP_001857967.1| hypothetical protein Bphy_1739 [Burkholderia phymatum STM815]
gi|184192956|gb|ACC70921.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 228
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 37/183 (20%)
Query: 6 YGLFVCLIFFIMGFISFIRYV------------KQMHIPDHPSVSAIVVL-TGEPIR--- 49
G ++F+ +G + + + + + + +AIV+L TG R
Sbjct: 10 IGTTTIVLFWAVGAGWLAQPLLDLAQRGAPPGGQTVAPATYAAHTAIVLLGTGTVHRDGK 69
Query: 50 ----------IERAFELLENQIGE----KIFISGVHH---SVSKDILLQKIPIRQDLAEC 92
I + +L + +SG + ++ +R+++
Sbjct: 70 LVPPRDAIARIAMSADLYARCKQVSSVCHVIVSGGNPQEHEATEADTYLPYLLREEVPRG 129
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
I + +++ T NA+ +A + +++VT Y MPR L R P P+
Sbjct: 130 DIILENRSMTTYENARNVAAILPDGYYGSLMLVTSAYQMPRALLNFHRFGMN----PLPV 185
Query: 153 ISH 155
+S+
Sbjct: 186 VSN 188
>gi|87123192|ref|ZP_01079043.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
gi|86168912|gb|EAQ70168.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
Length = 250
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 37/199 (18%)
Query: 2 RYFWYGLFVCLIFFIMGFI------SFIRYVKQMHIPDHPSVSAIVVLTGEPI------- 48
R+ G L FF +G + +++ P+ AIVVL+G
Sbjct: 32 RWPLIGALALLWFFSLGLVSQVLWRWLEAPWQRLPAAAAPTADAIVVLSGGRHPAPGAAR 91
Query: 49 --------RIERAFELLENQIGEKIFISGVHHSVSK---DILLQKIPIRQDLAECCIDIG 97
R +L ++ +G + + + L I
Sbjct: 92 VSEWEDPDRFLAGLDLYRAGKAPRLLFTGGASPFRPGQPPEGQRYLAEAEQLG-----IP 146
Query: 98 YKAL-------NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPY 150
+A+ NT A + + +L+VT +HM R +R V+ P
Sbjct: 147 SEAMASTPVVVNTAEEAVAIRRLLQAPSAR-ILLVTSAFHMRRAQRLFERQGLEVKPFPV 205
Query: 151 PIISHDLEENSSIFKIKIL 169
+ S
Sbjct: 206 DFQTRGAWAGSLWRDPSQW 224
>gi|218779182|ref|YP_002430500.1| hypothetical protein Dalk_1331 [Desulfatibacillum alkenivorans
AK-01]
gi|218760566|gb|ACL03032.1| protein of unknown function DUF218 [Desulfatibacillum alkenivorans
AK-01]
Length = 178
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-IDIGYKAL 101
+G R+E + L + + E + IS + + L+ R L + + KA
Sbjct: 2 FSGAVSRVEATYGLAKEGLAESLVIS---PAT--EQSLRFYKNRYGLPDSVNQVLEPKAR 56
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEE 159
T NA ++ +++V++VTH++HMPR++ L+ + V+ Y + +E
Sbjct: 57 TTFENALLCGEIIKREGWNNVILVTHEHHMPRSYFLLRWVLLGEGVEIQRYGVPLRSIEG 116
Query: 160 NSSIFKIKILRVLLIEYL-------KILLLSIQLSLS 189
I L+++ E + + +L I+ L
Sbjct: 117 REVSTTID-LKIMYNEMVDLWGSLGEWVLYKIRGRLP 152
>gi|297538308|ref|YP_003674077.1| hypothetical protein M301_1116 [Methylotenera sp. 301]
gi|297257655|gb|ADI29500.1| protein of unknown function DUF218 [Methylotenera sp. 301]
Length = 227
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 43 LTGEPIRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
LTG R++ L + + + +SG + + + + R + I + ++
Sbjct: 86 LTG---RVDEGLLLAQQGLVSTLLMSGGLDYEDERIEAVTMEAHARSKGFQGEILLESRS 142
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLE 158
+T N + E + +++I + YHM R +E + + + Y S
Sbjct: 143 SSTLENLTFSRPILEAADIKNIIITSEPYHMWRVKKLVEAGHLGRKIN-VSYAAASSQCW 201
Query: 159 ENSSIFKIKILR 170
N + LR
Sbjct: 202 VNWGMAFKGALR 213
>gi|78189450|ref|YP_379788.1| hypothetical protein Cag_1489 [Chlorobium chlorochromatii CaD3]
gi|78171649|gb|ABB28745.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 235
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 59/165 (35%), Gaps = 6/165 (3%)
Query: 26 VKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSV---SKDILLQ 81
+ + IVVL G+ R+++ EL + +K+ ++G+ S+ +
Sbjct: 53 LLSLPASKPQKADVIVVLGGDKGLRVQKGAELYNDGFSKKVLLTGIDRRYYRPSRPNWRE 112
Query: 82 KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI 141
+ + + I + K+ + A +A E+ + ++V+ HM R +L
Sbjct: 113 RRIRDLGVKKSAIVVDTKSQTSWEEAMNTAATMERRKWESAIVVSDPPHMLRLWLTWHHA 172
Query: 142 NSTVQFIPYPIISHDLEENS--SIFKIKILRVLLIEYLKILLLSI 184
+ + + + + ++ E K + +
Sbjct: 173 FAGTSKRFTLVATKPDWWHPIFWWKHKTNYKFVVSELKKNIAYVV 217
>gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
Length = 262
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 30/177 (16%)
Query: 1 MRYFWYGLFVCLIFFIMG--FISFIRYVKQMHIPDHPSVSAIVVLTGE------------ 46
+ F + +F G F+ + P+ ++ I+VL G
Sbjct: 40 LSAFGLAVLFVTLFTTAGSYFLQILEDRFPRPTPEPTELACIIVLGGAFENVVMASRGGM 99
Query: 47 -----PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY--- 98
R L + +I +SG S + + + IG
Sbjct: 100 ELNQAAERFVETLRLAQAYPQARILVSGGD--GSLSGIYEGDAHASENFFGTFGIGSDRL 157
Query: 99 ----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA+ KN +VT YHMPR+ + + ++ P+P
Sbjct: 158 IRAGESRTTFENARYTRDLLAKNGLERCALVTSAYHMPRSIGLFRA--NGMEVTPWP 212
>gi|149191740|ref|ZP_01869980.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
gi|148834429|gb|EDL51426.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
Length = 297
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 63/162 (38%), Gaps = 11/162 (6%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L G K+ +SG VS + K+ + +A+ I + A +T
Sbjct: 108 RLSEGIRILRMYPGAKLILSGYDGGTGVSHARTMAKVALALGIAKPDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A++A+ + + +++VT HM R E + P ++ E +
Sbjct: 168 ARQAAGFVQNKK---LVLVTSASHMKRAMHEFEAAGLNPLPAPTNFLAQKDIEQAWQKYT 224
Query: 167 KILRVL------LIEYLKILLLSIQLSLSTQTASQFFITLIE 202
R L E + ++ +++ ++ + +F ++ E
Sbjct: 225 PSSRYLEQTERYWHETMGLIWQNLRDWVANEGNQEFLPSVSE 266
>gi|28211594|ref|NP_782538.1| membrane associated protein [Clostridium tetani E88]
gi|28204035|gb|AAO36475.1| membrane associated protein [Clostridium tetani E88]
Length = 192
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 49 RIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RIE + L + G I SG S+S+ +++ I + + E I K+ +T
Sbjct: 60 RIEEGYRLYKEGYGRYILASGGKGPGESISEAEAMKRYLISKGIKEEYIIKEDKSTSTME 119
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEE 159
N + + EK + +IV++ YH+ R L +++ F + S+ E
Sbjct: 120 NLKNCNKIMEKKGLKNAVIVSNKYHLKRASLMTKKVGIDSSFSGVYVTSYKKHE 173
>gi|170744388|ref|YP_001773043.1| hypothetical protein M446_6345 [Methylobacterium sp. 4-46]
gi|168198662|gb|ACA20609.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 273
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 59/180 (32%), Gaps = 15/180 (8%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHH 72
+ + G ++ ++ + +V R A + SG
Sbjct: 84 VVVLGGALAEGIRAERGAPGLNREADRLVAFAALARRYPAAKLVFAGGPA-----SGRRE 138
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+++ + + L + + ++ +T NA EA A A L+VT HMP
Sbjct: 139 GLTEAQASRALLEEIGLPPGRLLVDDRSRSTWENAVEARALARPGPGETWLLVTSASHMP 198
Query: 133 RTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLI-----EYLKILLLSIQ 185
R +R + +P+ ++ + ++ I E+ +L ++
Sbjct: 199 RAMGAFRRAGWPP---LLAWPVAYRTTRRGAAALRPLGAKLAAIDLAAHEWAGLLAYRLR 255
>gi|53719541|ref|YP_108527.1| hypothetical protein BPSL1927 [Burkholderia pseudomallei K96243]
gi|126452373|ref|YP_001066022.1| hypothetical protein BURPS1106A_1753 [Burkholderia pseudomallei
1106a]
gi|167816053|ref|ZP_02447733.1| hypothetical protein Bpse9_12987 [Burkholderia pseudomallei 91]
gi|167824429|ref|ZP_02455900.1| hypothetical protein Bpseu9_12213 [Burkholderia pseudomallei 9]
gi|167845961|ref|ZP_02471469.1| hypothetical protein BpseB_11780 [Burkholderia pseudomallei B7210]
gi|226199704|ref|ZP_03795257.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242315371|ref|ZP_04814387.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254179990|ref|ZP_04886589.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254297823|ref|ZP_04965276.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|52209955|emb|CAH35927.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|126226015|gb|ABN89555.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157807296|gb|EDO84466.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|184210530|gb|EDU07573.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|225928290|gb|EEH24324.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242138610|gb|EES25012.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 240
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|224542305|ref|ZP_03682844.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
gi|224524754|gb|EEF93859.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
Length = 210
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 19/198 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IR 49
M+ + + + F + + D + +VL G R
Sbjct: 11 MKILKKLIIIVALVICYVFSNAVSIYIYSFKDDARNADVAIVL-GASTYNGHPSPVYQER 69
Query: 50 IERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
I A +L + +KI ++G + VS + + Q + E + ++ T N
Sbjct: 70 INHAVDLYNKHLVKKIIMTGGYGKGNPVSDAYNAKLYAVSQGVPEDDVLTEDQSTVTLEN 129
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + N+ LIV+ HM R L+ I Y +H + K
Sbjct: 130 LINAKKIMDVYNYQTALIVSDPLHMKRAMLQ----AKDAGIIAYTSPTHSSRFRTRDTKF 185
Query: 167 KILRVLLIEYLKILLLSI 184
K L+ +I Y+ +
Sbjct: 186 KFLKREVINYIGYKWYRL 203
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
V TG + + S+ + ++ ++ +
Sbjct: 127 VAFTGGTGWAADGMQ-----------------TASEAEVAAQVALQDYGFTLRWS-ESAS 168
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP----YPIISHD 156
+T GNA+ + +++ + +VTH +HMPR +R +V P PI +H
Sbjct: 169 RDTSGNARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHL 228
Query: 157 LEENSSIFKIKILRVLLIE 175
L+ S ++ R++L E
Sbjct: 229 LQWLPSAQGLQASRLVLRE 247
>gi|53724817|ref|YP_102769.1| hypothetical protein BMA1073 [Burkholderia mallei ATCC 23344]
gi|67641348|ref|ZP_00440128.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121599410|ref|YP_992846.1| hypothetical protein BMASAVP1_A1516 [Burkholderia mallei SAVP1]
gi|124385403|ref|YP_001026188.1| hypothetical protein BMA10229_A0183 [Burkholderia mallei NCTC
10229]
gi|134282282|ref|ZP_01768987.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167003067|ref|ZP_02268857.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167719831|ref|ZP_02403067.1| hypothetical protein BpseD_12495 [Burkholderia pseudomallei DM98]
gi|254178040|ref|ZP_04884695.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254188599|ref|ZP_04895110.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254199716|ref|ZP_04906082.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254206038|ref|ZP_04912390.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254358413|ref|ZP_04974686.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|52428240|gb|AAU48833.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228220|gb|ABM50738.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293423|gb|ABN02692.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134246320|gb|EBA46409.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147749312|gb|EDK56386.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147753481|gb|EDK60546.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148027540|gb|EDK85561.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157936278|gb|EDO91948.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160699079|gb|EDP89049.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238522267|gb|EEP85712.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243061318|gb|EES43504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
Length = 240
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|167854576|ref|ZP_02477357.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
gi|167854331|gb|EDS25564.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ I D+ S AIV+L+G R+ A L+ + G + I+G
Sbjct: 68 DNLSIEDYKSAQAIVLLSGGLRDSKELFGKLAISEIALERVRYA-AFLQKETGLPLLITG 126
Query: 70 VHH------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+V K L Q I + KA T NA+ + EK + ++
Sbjct: 127 SSPKGTSEAAVMKKELEQFFHIPTQW------LEEKAKTTAENAKFSKPILEKEGINKIV 180
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + +R
Sbjct: 181 LVTNQWHMQRARMLFER 197
>gi|284039129|ref|YP_003389059.1| hypothetical protein Slin_4276 [Spirosoma linguale DSM 74]
gi|283818422|gb|ADB40260.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 272
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 67/243 (27%)
Query: 1 MRYFWYGLFVCLIFFIMG---------FISFIRYVKQMHIPDHPSVSAIVVLTGE----- 46
+R GL + +F++ G MH P +VLTG
Sbjct: 34 LRRQLIGLALG-VFWLFGNSFLVNELALWWEYPIKPDMHAPGDSVKRVAIVLTGGMINGE 92
Query: 47 ---------------------PIRIERAFELLENQIGEKIFISGV------------HHS 73
RI +A L + +K+ ISG
Sbjct: 93 REAPGKPLNRTHLARFLLGREADRIGQALYLYKTGAVQKVLISGGLGSWPFQPISLNDEG 152
Query: 74 VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN----NFHHVLIVTHDY 129
LL +R + I + K+ NT NA+ ++ K+ ++ +V ++T +
Sbjct: 153 HLAGELLIIAGVRPE----DIMLEGKSRNTHENARFSAPILRKHFDKAHYEYV-LITSAW 207
Query: 130 HMPRTFLELQRINSTVQFIPYP---IISHDLEENSSIFKIKILRV-----LLIEYLKILL 181
HM R Q+ VQ IP+P + + L + L+ E++ +
Sbjct: 208 HMKRAIACFQK--EGVQTIPFPSNFLGNRRLSGPAEWLLPDEEAFFESYYLIREFVGYIT 265
Query: 182 LSI 184
+
Sbjct: 266 YKV 268
>gi|189346479|ref|YP_001943008.1| hypothetical protein Clim_0953 [Chlorobium limicola DSM 245]
gi|189340626|gb|ACD90029.1| protein of unknown function DUF218 [Chlorobium limicola DSM 245]
Length = 197
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 7/189 (3%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLENQ 60
RY + + F+S + + IVVL G+ R+E+ EL N
Sbjct: 7 RYLSIFILSVVTVTAAVFLS-LGFAVSYPAQKPEKADVIVVLGGDDGLRVEKGAELYNNG 65
Query: 61 IGEKIFISGVHHSV---SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
+ ++G+ + ++ + + I + ++ T A AS +K
Sbjct: 66 FAPNVLLTGIDARFYRPGRPNWRERRMRDLGVPKKAIRVDTESETTWEEAVNASETLQKQ 125
Query: 118 NFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ ++V+ HM R +R+ S+ + I R ++ E
Sbjct: 126 KWESAIVVSDPPHMLRIHQTWRRVFEGSSKKIILVSTEPDWWNALLWWKNKTSYRFVISE 185
Query: 176 YLKILLLSI 184
K +
Sbjct: 186 IKKNIYYYA 194
>gi|316933607|ref|YP_004108589.1| hypothetical protein Rpdx1_2264 [Rhodopseudomonas palustris DX-1]
gi|315601321|gb|ADU43856.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 34/192 (17%)
Query: 25 YVKQMHIPDH---PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEK 64
+ + + P H + I+VL G R+ +L +
Sbjct: 64 SLSERYPPWHDTGRAPDGIIVLGGAINSEVSAARNTVELDASAERVLATLDLARRYPQAR 123
Query: 65 IFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
I SG + S ++ L ++ R LA + + ++ T NA A
Sbjct: 124 IVYSGGSGNLIQRSAAEAPLAGELLERFGLAAGRVVLEDQSRTTAENAANTRALVSPKPG 183
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILR-------VL 172
L+VT +HMPR+ + Q V + YP+ L V
Sbjct: 184 ELWLLVTSSFHMPRSIMAFQAAGFDV--VAYPVDWRTRGREDVALPFATLAAGLARTDVA 241
Query: 173 LIEYLKILLLSI 184
E+ +L +
Sbjct: 242 AHEWAGLLAYRL 253
>gi|304316432|ref|YP_003851577.1| hypothetical protein Tthe_0963 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777934|gb|ADL68493.1| protein of unknown function DUF218 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 191
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE------------PIRIERAFELL 57
+ ++ I+ ++ + + + AI+VL R+ A +L
Sbjct: 7 ITAFVVLLNIIAELQVITFAYNAKPVNSDAIIVL--GCAVYGKNPSPFFKERLSEAIKLY 64
Query: 58 ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
+ +G+ I +SG +S+ ++ ++ + + + + + +T N + +
Sbjct: 65 KEGLGKYIIVSGGKGPGEDISEAEAGKEYLLKNGITDNVVLMDDGSYSTLQNLENSKKIM 124
Query: 115 EKNNFHHVLIVTHDYHMPRT 134
++ + +IV++ +H+ R
Sbjct: 125 DEKSLKTAIIVSNKFHLKRA 144
>gi|52424963|ref|YP_088100.1| hypothetical protein MS0908 [Mannheimia succiniciproducens MBEL55E]
gi|52307015|gb|AAU37515.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 250
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIER-AFELLENQIGEKI--------FISGV 70
+ + D+ S AIVVL +I L + + ISG
Sbjct: 70 DNLTVEDYRSAQAIVVLGAGLRDSKELYNKITVPGIALERMRYAAYLHKETELPILISGA 129
Query: 71 HH-SVSKDILLQK-----IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
S+ ++ + ++ + ++ NT+ NA E+ +++
Sbjct: 130 GPNGNSEAKIMGQEFFTFFGVQPKW------LEERSTNTKQNALYTREMLEREGIKRIIL 183
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R L +
Sbjct: 184 VTNQWHMQRAKLLFEA 199
>gi|255065363|ref|ZP_05317218.1| putative SanA protein [Neisseria sicca ATCC 29256]
gi|255050188|gb|EET45652.1| putative SanA protein [Neisseria sicca ATCC 29256]
Length = 224
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 22/165 (13%)
Query: 7 GLFVCLIFFIMGFI-----SFIRYVKQMHIPDHPSVSAIVVLT-----GEP------IRI 50
+F+ ++FF + V ++ A VVL+ G R+
Sbjct: 33 LVFILVLFFTAALLPLWIMWRDFQVSRLDADTVRPADAAVVLSTRSYEGGRLNPCLVARV 92
Query: 51 ERAFELLENQIGEKIFISGVHHS--VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQ 108
E A EL +K+ +SG S +Q I + +++ I +A NT N
Sbjct: 93 EAAVELYRAGKVKKLVMSGGLSRDFQSASGNMQAIAEKMGVSKEDIIQERRAENTFENIV 152
Query: 109 EASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIPYP 151
+ + E N V+IV+ +H+ R + Q +Q P
Sbjct: 153 FSRDFIE--NSPRVVIVSAGFHLARAQMMADRQWQGHDIQVYAAP 195
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 34/182 (18%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVS--------AIVVLTGEP---------- 47
+F F+++ + ++ P + + AI++L G
Sbjct: 47 LAIFTVAFFWLLAAGWLTAPLLRLAQPHWRTEAPATFAPRTAIIMLGGGTIYGAGQVLMP 106
Query: 48 -----IRIERAFELLEN-QIGE---KIFISGVHH---SVSKDILLQKIPIRQDLAECCID 95
RI + E + + +SG + ++ +R+ + I
Sbjct: 107 PRDVLARIAASAEYYAACKRAADICHVIVSGGNPQRHRATEADTYLPYLLRRQVPRADIV 166
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+ ++L T NA+ S + + ++++T Y MPR L+ R P P+IS+
Sbjct: 167 LENRSLTTYENARNVSGIVHGSRYDSLILITSAYQMPRALLDFHRFG----LTPQPMISN 222
Query: 156 DL 157
+
Sbjct: 223 AI 224
>gi|325578228|ref|ZP_08148363.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159964|gb|EGC72093.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 30/142 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R +L L+ + + I+G
Sbjct: 68 DHLTLQDYQQAQAIVLL-GGGLRDSKELYAPLASTGIQLERLRYAAFLQKETHLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ++ + L + I KAL T+ NA EK H ++
Sbjct: 127 ASPTGAIEAKIAAEELQNFFNVPTKW------IEPKALTTKENALFTKQMLEKEGIHKII 180
Query: 124 IVTHDYHMPRTFLELQRINSTV 145
+VT+++HM R L Q+ V
Sbjct: 181 LVTNEWHMQRAKLLFQQQGFDV 202
>gi|77465405|ref|YP_354908.1| hypothetical protein RSP_3403 [Rhodobacter sphaeroides 2.4.1]
gi|77389823|gb|ABA81007.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 280
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 135 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 174
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR +P+P
Sbjct: 175 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 233
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 267
>gi|294852515|ref|ZP_06793188.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
gi|294821104|gb|EFG38103.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|17987093|ref|NP_539727.1| hypothetical protein BMEI0810 [Brucella melitensis bv. 1 str. 16M]
gi|163843442|ref|YP_001627846.1| hypothetical protein BSUIS_A1225 [Brucella suis ATCC 23445]
gi|189024327|ref|YP_001935095.1| hypothetical protein BAbS19_I11160 [Brucella abortus S19]
gi|225852674|ref|YP_002732907.1| hypothetical protein BMEA_A1222 [Brucella melitensis ATCC 23457]
gi|254689399|ref|ZP_05152653.1| hypothetical protein Babob68_04337 [Brucella abortus bv. 6 str.
870]
gi|254693883|ref|ZP_05155711.1| hypothetical protein Babob3T_04332 [Brucella abortus bv. 3 str.
Tulya]
gi|254697533|ref|ZP_05159361.1| hypothetical protein Babob28_07456 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701918|ref|ZP_05163746.1| hypothetical protein Bsuib55_13827 [Brucella suis bv. 5 str. 513]
gi|254704463|ref|ZP_05166291.1| hypothetical protein Bsuib36_11145 [Brucella suis bv. 3 str. 686]
gi|254710250|ref|ZP_05172061.1| hypothetical protein BpinB_08247 [Brucella pinnipedialis B2/94]
gi|254714246|ref|ZP_05176057.1| hypothetical protein BcetM6_13021 [Brucella ceti M644/93/1]
gi|254717682|ref|ZP_05179493.1| hypothetical protein BcetM_15020 [Brucella ceti M13/05/1]
gi|254730428|ref|ZP_05189006.1| hypothetical protein Babob42_04352 [Brucella abortus bv. 4 str.
292]
gi|256031744|ref|ZP_05445358.1| hypothetical protein BpinM2_14019 [Brucella pinnipedialis
M292/94/1]
gi|256044830|ref|ZP_05447734.1| hypothetical protein Bmelb1R_10074 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113736|ref|ZP_05454540.1| hypothetical protein Bmelb3E_13258 [Brucella melitensis bv. 3 str.
Ether]
gi|256257645|ref|ZP_05463181.1| hypothetical protein Babob9C_09914 [Brucella abortus bv. 9 str.
C68]
gi|256263835|ref|ZP_05466367.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168877|ref|ZP_05755688.1| hypothetical protein BruF5_11021 [Brucella sp. F5/99]
gi|260546638|ref|ZP_05822377.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565570|ref|ZP_05836054.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260754918|ref|ZP_05867266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758135|ref|ZP_05870483.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761961|ref|ZP_05874304.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883930|ref|ZP_05895544.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214170|ref|ZP_05928451.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261219524|ref|ZP_05933805.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317810|ref|ZP_05957007.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322019|ref|ZP_05961216.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752483|ref|ZP_05996192.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755142|ref|ZP_05998851.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758366|ref|ZP_06002075.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988841|ref|ZP_06101398.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991256|ref|ZP_06103813.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995092|ref|ZP_06107649.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982753|gb|AAL51991.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|163674165|gb|ABY38276.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
gi|189019899|gb|ACD72621.1| Protein of unknown function DUF218 [Brucella abortus S19]
gi|225641039|gb|ACO00953.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260095688|gb|EEW79565.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151638|gb|EEW86732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260668453|gb|EEX55393.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672393|gb|EEX59214.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675026|gb|EEX61847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873458|gb|EEX80527.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915777|gb|EEX82638.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260924613|gb|EEX91181.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294709|gb|EEX98205.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297033|gb|EEY00530.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738350|gb|EEY26346.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742236|gb|EEY30162.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744895|gb|EEY32821.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262766205|gb|EEZ11994.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002040|gb|EEZ14615.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093964|gb|EEZ17898.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661038|gb|EEZ31299.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|326409195|gb|ADZ66260.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538905|gb|ADZ87120.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|302392084|ref|YP_003827904.1| hypothetical protein Acear_1326 [Acetohalobium arabaticum DSM 5501]
gi|302204161|gb|ADL12839.1| protein of unknown function DUF218 [Acetohalobium arabaticum DSM
5501]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 51 ERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
E +L+ + GV S +++++ + + E I + KA NT NA
Sbjct: 130 ETGLDLVVSG--------GVVPGADNTSGAEVMKEVLLDLGVKEDKIILEKKAKNTWQNA 181
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ E+ + +++VT HM R +R N + IP P
Sbjct: 182 VNTALLLEEREYEQIILVTSALHMKRAVYSFER-NCNQRLIPAP 224
>gi|256159910|ref|ZP_05457632.1| hypothetical protein BcetM4_13019 [Brucella ceti M490/95/1]
gi|256255144|ref|ZP_05460680.1| hypothetical protein BcetB_12801 [Brucella ceti B1/94]
gi|261222341|ref|ZP_05936622.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265998306|ref|ZP_06110863.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920925|gb|EEX87578.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552774|gb|EEZ08764.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|161619130|ref|YP_001593017.1| hypothetical protein BCAN_A1197 [Brucella canis ATCC 23365]
gi|260566292|ref|ZP_05836762.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335941|gb|ABX62246.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260155810|gb|EEW90890.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 264
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|23502055|ref|NP_698182.1| hypothetical protein BR1177 [Brucella suis 1330]
gi|62290089|ref|YP_221882.1| hypothetical protein BruAb1_1183 [Brucella abortus bv. 1 str.
9-941]
gi|82700013|ref|YP_414587.1| hypothetical protein BAB1_1199 [Brucella melitensis biovar Abortus
2308]
gi|225627645|ref|ZP_03785682.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815595|ref|ZP_04594592.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256369602|ref|YP_003107112.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297248487|ref|ZP_06932205.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
gi|23348011|gb|AAN30097.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196221|gb|AAX74521.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616114|emb|CAJ11155.1| Protein of unknown function DUF218 [Brucella melitensis biovar
Abortus 2308]
gi|225617650|gb|EEH14695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788893|gb|EEP63104.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999764|gb|ACU48163.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297175656|gb|EFH35003.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
Length = 268
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 52 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 111
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 112 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 171
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 172 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 219
>gi|331085682|ref|ZP_08334765.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406605|gb|EGG86110.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 241
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYV---KQMHIPDHPSVSAIVVLTGEPI------------R 49
W + + FI F+ F V M + I+VL R
Sbjct: 54 WLQYILLTLNFIAYFVFFAVQVIICSAMLTLPPKKLDVIIVL--GAQVRGKKITNSLKRR 111
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
++R L+ ++ +SG V++ + + + +AE I + K+ NT N
Sbjct: 112 LDRGVAYLKENPETRVVVSGGQGKGEDVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYEN 171
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + + + IV++++H+ R+ L
Sbjct: 172 LKYSALLVDSMD-DRIGIVSNNFHIYRSLL 200
>gi|114319324|ref|YP_741007.1| hypothetical protein Mlg_0162 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225718|gb|ABI55517.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 247
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 55/180 (30%), Gaps = 24/180 (13%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPI-----------------RIERAFELLENQIGEKIFISG 69
+ AIVVL R+ A L + G + SG
Sbjct: 64 PPVQPAQLRDAQAIVVLGAGYRSGADEFSGETVNDLALVRLRYA-AYLHRETGLPVIASG 122
Query: 70 VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDY 129
+ + + + I +A +T GNAQ + + V +V+H +
Sbjct: 123 GAATDREPEARWMAEVLAEFGVDPILTESEARDTWGNAQHTAELLARQGLSRVALVSHAH 182
Query: 130 HMPRTFLELQRINSTVQFIPYPIISHDLEENSS------IFKIKILRVLLIEYLKILLLS 183
HMPR ++ TV P S +++ + + EYL +
Sbjct: 183 HMPRAVWAFEQAGVTVLPAPTGAFVPHDRGWSWGMLRPQANALRMSWLAMHEYLGLFWYR 242
>gi|323499476|ref|ZP_08104447.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
gi|323315463|gb|EGA68503.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
Length = 267
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG +S ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRIMRIYPGSKLILSGYAGGSEISNARMMAKVALALGVSKSDIVLLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E PYP ++ L ++
Sbjct: 165 WEEARQAAAFVK---HRKLVVVTSASHMQRALNEFHSAG----LKPYPAPTNYLAHDN 215
>gi|239624750|ref|ZP_04667781.1| exported protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521136|gb|EEQ61002.1| exported protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 26/188 (13%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV----SAIVVL------TGEPI---- 48
+ L CL+ F++ + K + + I+VL G P
Sbjct: 14 FLVLALAGCLVLFLVNLYIIRKEEKYIVSAEEARAFEDVDCIMVLGCGVRPDGSPSGMLN 73
Query: 49 -RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEG 105
R+ + L + + +++ +SG H V+ D L+++ I + + I + + +T
Sbjct: 74 DRLVQGISLYKEDVSDRLLMSGDHGKVNYDEVNLMKQFAIDRGVPSENIFMDHAGFSTYE 133
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
+ A + ++IVT YHM R + + Y + S K
Sbjct: 134 SMYRARDIFQ---VKKIVIVTQRYHMYRAL----YVAQAMGMEAYGVASDPRTYGG--QK 184
Query: 166 IKILRVLL 173
++ LR LL
Sbjct: 185 MRDLRELL 192
>gi|159044137|ref|YP_001532931.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
gi|157911897|gb|ABV93330.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
Length = 213
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 22/156 (14%)
Query: 1 MRYFW----YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE---------- 46
MR W G+ V + F + F + Y P +AIVVL+
Sbjct: 4 MRALWQLCKIGVLVLMGFAVATFAGIVLY----EPPARSEYAAIVVLSHGVAADGTLSPQ 59
Query: 47 -PIRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
R + + E K+ SG SK L+ + I L + ++ +
Sbjct: 60 TAARTQAGLDAFEAGYAPKVIFSGGLGGLEPASKGALMAEAAIAAGLPAEVAMVEGESHS 119
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
T NA + + VL+VTH YH R+
Sbjct: 120 TLQNALFTARLVPELRDQPVLLVTHRYHGMRSIASF 155
>gi|78187520|ref|YP_375563.1| hypothetical protein Plut_1666 [Chlorobium luteolum DSM 273]
gi|78167422|gb|ABB24520.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 246
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 26 VKQMHIPDHPSVSAIVVLTG---------------EPIRIERAFELLENQIGEKIFISGV 70
+++ AIVVL G R E +L + +G
Sbjct: 61 ARRVPAASVAHADAIVVLGGMTMQLPGAPLGEWGEAADRFEAGIDLYREGKAPLLVFTGG 120
Query: 71 -----HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
+ V + LL ++ D+ + + A NT A A+ + +++V
Sbjct: 121 RLPWRENFVPEGELLALRALQLDIPRASVLVTGIAGNTSDEAGAAAELLGPS--KKIILV 178
Query: 126 THDYHMPRTFLELQRIN 142
T +HMPR+ L R
Sbjct: 179 TSAFHMPRSILLFHRAG 195
>gi|120402709|ref|YP_952538.1| hypothetical protein Mvan_1708 [Mycobacterium vanbaalenii PYR-1]
gi|119955527|gb|ABM12532.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 190
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 18 GFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEKIFISGVHHSVS 75
G F + AIVVL G R L E + +S + S
Sbjct: 29 GTFLFA----HSKVDPLARADAIVVL-GGEHDGRETYGLTLAEQGYAPVVLLS--NPYRS 81
Query: 76 KDILLQKIPIRQDLAE--CCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR 133
KD ++ K + C + T G A A+K+ + V++V+ YH+PR
Sbjct: 82 KDKVMAKACAPRTDIRVICRAPVPS---TTRGEAMMTRELADKHGWTTVIVVSWRYHLPR 138
Query: 134 T 134
Sbjct: 139 A 139
>gi|170760763|ref|YP_001786003.1| putative sanA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407752|gb|ACA56163.1| putative SanA protein [Clostridium botulinum A3 str. Loch Maree]
Length = 222
Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RILTVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|325127259|gb|EGC50197.1| hypothetical protein NMXN1568_2007 [Neisseria meningitidis N1568]
Length = 214
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|304392434|ref|ZP_07374375.1| periplasmic protein [Ahrensia sp. R2A130]
gi|303295538|gb|EFL89897.1| periplasmic protein [Ahrensia sp. R2A130]
Length = 189
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 22/157 (14%)
Query: 33 DHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGV---HHSVSKDI 78
+ S AIVVL G R A L + + + +SG H
Sbjct: 2 ELKSAYAIVVLGAAVWKDGRASPALERRTRHAIALHQQGLAPILVLSGGLGRHPPTEAKA 61
Query: 79 LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLEL 138
+ +I + + + + + + ++ NT N ++A + + VL+V+ YH+PR +
Sbjct: 62 -MAEICMGEGVPQAALLLEGRSTNTFENVAFSAALLREKRVNSVLVVSDAYHLPRAKMCF 120
Query: 139 QRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ + FI + + R L E
Sbjct: 121 RYLG----FIATGSAAVAGPTTPWY---RTARYWLRE 150
>gi|221369405|ref|YP_002520501.1| hypothetical protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
gi|221162457|gb|ACM03428.1| Hypothetical Protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
Length = 267
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 122 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA A A L+VT +HMPR +P+P
Sbjct: 162 LEGQSRNTAENAHFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 220
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 254
>gi|123966515|ref|YP_001011596.1| hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
gi|123200881|gb|ABM72489.1| Hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
Length = 236
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 30/181 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGF---IS--FIRYVKQMHIPDHPSVSAIVVLTGEPI------- 48
+R+ + L + L+F F + K++ S IVVL+G
Sbjct: 14 LRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVVLSGGRHLPLGNTK 73
Query: 49 --------RIERAFELLENQIGEKIFISGVHHSVS-----KDILLQKIPIRQDLAECCID 95
R EL + K+ +G ++ + + K I + + +
Sbjct: 74 IIEWHDPDRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIKEAISMGIPKKDVL 133
Query: 96 IGYKALNTEGNAQEASAWAEKNN---FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
Y NT A+ A + +++VT +HM R +R + +PYP+
Sbjct: 134 TTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAFHMKRAKKVFER--EGMNVLPYPV 191
Query: 153 I 153
Sbjct: 192 D 192
>gi|332561062|ref|ZP_08415380.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
gi|332274860|gb|EGJ20176.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
Length = 267
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 122 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 161
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR +P+P
Sbjct: 162 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQ-DLVPWPTDYR 220
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 254
>gi|307298224|ref|ZP_07578028.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916310|gb|EFN46693.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 252
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 8 LFVCLIFFIM--GFI--SFIRYVKQMH-IPDHPSVSAIVVLTGE--------------PI 48
+ +C +++ GF +++ +++ + P++ S AIVVL+
Sbjct: 46 IILCFFAYLLSTGFGTHLYLQPLERAYTAPNNVSGQAIVVLSSGIIISPEGQVLDNHSVA 105
Query: 49 RIERAFEL-LENQIGEKIFISG----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
R+ +A+ L L+ ++ I ++G +V+ L++ + + +A + + A T
Sbjct: 106 RLSKAYSLHLQTKL--PIIVTGSFMPGRSTVAVSELMRDWLLDRGVASSKVIVEPMAQTT 163
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
NA+ ++ + N+ +++VT HM R ++ ++ P+P
Sbjct: 164 WENARYSADICSQFNWSSIVLVTSAVHMKRAVTSFEKF--GLRVTPFP 209
>gi|28198681|ref|NP_778995.1| hypothetical protein PD0776 [Xylella fastidiosa Temecula1]
gi|28056772|gb|AAO28644.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|307579820|gb|ADN63789.1| hypothetical protein XFLM_09510 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 202
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 30/191 (15%)
Query: 3 YFWYGLFVCLIFF----IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------I 48
+ W + V L+FF + G+I +I Q S I+VL
Sbjct: 11 WQWICVLVVLVFFWLVAVAGWIVWIGQRDQAA-----SSDVIIVLGAAAYDAKPSPVFEE 65
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKD----ILLQKIPIRQDLAECCIDIGYKALNTE 104
RI L ++ + +G S + ++ +R D+ I I + T
Sbjct: 66 RIRHGLYLYQHGYAPTLIFTGGFGGSSARFAESQVARRYALRYDVPSRAILIETVSRTTR 125
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
N +A ++V+ HM R R+ + + S
Sbjct: 126 QNLIQARQLMRVYGLRRAIVVSDPLHMARAL----RLCRELDIDALASATPSTRFRSLHT 181
Query: 165 KIKILRVLLIE 175
+ R LL E
Sbjct: 182 R---WRFLLQE 189
>gi|330721274|gb|EGG99364.1| Putative membrane protein [gamma proteobacterium IMCC2047]
Length = 256
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 25/133 (18%)
Query: 39 AIVVLTGEPIRIERA--------------FEL-----LENQIGEKIFISGV---HHSVSK 76
AIVVL R A L L + G + ++G V +
Sbjct: 83 AIVVL--GSGRYRAAPEYGGQDTAKPMGLVRLRYGAYLHRKTGLPLLVTGGAWLDDFVPE 140
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ ++ + L + ++ T NA+ + + +L+VTH +HMPR
Sbjct: 141 AEFMARVLEEEFLVKATWQ-EPRSRTTWENAKYSRELTGSDGVQKILLVTHAWHMPRALY 199
Query: 137 ELQRINSTVQFIP 149
+R V P
Sbjct: 200 SFERAGFDVTAAP 212
>gi|226308856|ref|YP_002768816.1| hypothetical protein RER_53690 [Rhodococcus erythropolis PR4]
gi|226187973|dbj|BAH36077.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 21/168 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------IR 49
R+ + + + + + A VV+ R
Sbjct: 19 RWVAGIAVLGAVVYAGSIVWISVASAGHTSDAADAPDAPVVIVLGAQIKDGKPMAFLKGR 78
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNA 107
++ A EL+E + + +SG + S D + + Q + E I L+T
Sbjct: 79 LDAAVELVEAGKAKAVLVSGDANGGSGDEIAAMTNYLVEQGIDERRIVGDPYGLDTYDTC 138
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
A LIVT YH+PR + V + S
Sbjct: 139 FRA---IHTYGVTKALIVTQGYHVPRAV----ALCRDVGIDADGVNSD 179
>gi|298244343|ref|ZP_06968149.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
gi|297551824|gb|EFH85689.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
Length = 239
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 48/221 (21%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEPI-------RIERA 53
+ W + L F + ++ F K+ + D V AIVVL G ++E A
Sbjct: 6 KVLWAISAITLSFIFI-WLLFYTRGKRFALRDKLQKVDAIVVLAGTRGNVEFLHKKVETA 64
Query: 54 FELLENQIGEKIFISG---------------------VHHS-VSKDILLQKIP------- 84
L + + I G V + + + +
Sbjct: 65 ARLYRDGWAKHIICGGKFSAKVTDSPQLMSQEELRLAVDQGRIQEKDIARAAATWDIALG 124
Query: 85 --------IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + + I + ++L+T A+ +K+ ++ +++VT +H RT+L
Sbjct: 125 ARYMRDKAMAYGVPDDAIVLEEESLHTRETAEYVLDIVQKHKWYKIILVTSPFHQLRTYL 184
Query: 137 ELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
++ +Q Y S + +L E
Sbjct: 185 TFAKVFLPYDIQISNYYADSDSWHPMAWFLSKSNRELLDSE 225
>gi|325143399|gb|EGC65728.1| hypothetical protein NMB9615945_0016 [Neisseria meningitidis
961-5945]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|17227740|ref|NP_484288.1| hypothetical protein all0244 [Nostoc sp. PCC 7120]
gi|17135222|dbj|BAB77768.1| all0244 [Nostoc sp. PCC 7120]
Length = 174
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 14/167 (8%)
Query: 13 IFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIR-IER---AFELLENQIGEKIFIS 68
+ F+ + F Q + A++VL G R +ER I+IS
Sbjct: 1 MLFLPLLMWFGY---QEAKNAYTQPQAVIVL-GGSTRNLEREKFTASFARKHPNLPIWIS 56
Query: 69 GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
G V + +K I + Y+A++T N + V ++T D
Sbjct: 57 GGSPPVYTKRVFKKAGIDTKRLH----LDYEAVDTVTNFTTLIDELQSRGIKSVYLITSD 112
Query: 129 YHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+HM R E+ + + F P + S + E R LL
Sbjct: 113 FHMRRACIIGEIVLGSRGITFKPISVPSENSPEPIEKSLRDGARALL 159
>gi|325133332|gb|EGC55998.1| hypothetical protein NMBM13399_2155 [Neisseria meningitidis M13399]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F ++ F + + +P H A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPHVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|75908946|ref|YP_323242.1| hypothetical protein Ava_2734 [Anabaena variabilis ATCC 29413]
gi|75702671|gb|ABA22347.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 167
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 14/160 (8%)
Query: 20 ISFIRYVKQMHIPDHPSVSAIVVLTGEPIR-IER---AFELLENQIGEKIFISGVHHSVS 75
+ F Q + A++VL G R +ER I+ISG V
Sbjct: 1 MWFGY---QEAKNAYTQPQAVIVL-GGSTRNLEREKFTASFARQHPNLPIWISGGSPPVY 56
Query: 76 KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT- 134
+ +K I + Y+A++T N + V ++T D+HM R
Sbjct: 57 TKRVFKKAGIDTKRLH----LDYEAVDTVTNFTTLIDELQSRGIKSVYLITSDFHMRRAC 112
Query: 135 -FLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
E+ + + F P + S + E R LL
Sbjct: 113 IIGEIVLGSRGITFKPISVPSENSPEPIEKSLRDGARALL 152
>gi|218661819|ref|ZP_03517749.1| hypothetical protein RetlI_21178 [Rhizobium etli IE4771]
Length = 214
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 17/115 (14%)
Query: 47 PIRIERAFELLENQIGEKIFISGVH---------HSVSKDILLQKIPIRQD-LAECCIDI 96
R A L + +I +SG + + + I +D L E
Sbjct: 57 ADRFVEALRLAQKFPQSRILVSGGDGSLSGIYEGDAAASERFFPLFGIGKDRLIE----- 111
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
++ T NA + H L++T +HMPR+ +++ + +P+P
Sbjct: 112 ERQSRTTFENAVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKL--GIDIVPWP 164
>gi|77461176|ref|YP_350683.1| hypothetical protein Pfl01_4955 [Pseudomonas fluorescens Pf0-1]
gi|77385179|gb|ABA76692.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 259
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 36/177 (20%)
Query: 10 VCLIFFIMGFI---------SFIRYVKQMHIPD-------HPSVSAIVVLTGEPIRIE-- 51
+C GF + +++ AIVVL R +
Sbjct: 37 LCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRADAIVVLGSGRERGDLA 96
Query: 52 ------RAFELLENQIGEKI--------FISGV-HHSVSKDILLQKIPIRQDLAECCIDI 96
L + ++ SG H+ +D +
Sbjct: 97 WGEDQPTGVGLERQRYAARLAKASGLPILTSGGLHYGTPPTEAKLMADSLRDDFGVTVRW 156
Query: 97 -GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI 152
++ T NA+ ++ +++VT +HMPR Q+ + +P P+
Sbjct: 157 QEGESRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQQA--GFEVVPAPV 211
>gi|254671270|emb|CBA08572.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|126463807|ref|YP_001044920.1| hypothetical protein Rsph17029_3048 [Rhodobacter sphaeroides ATCC
17029]
gi|126105618|gb|ABN78148.1| protein of unknown function DUF218 [Rhodobacter sphaeroides ATCC
17029]
Length = 280
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 27/154 (17%)
Query: 37 VSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPIRQDLAECCID 95
A V+ TG R+ E+ E +I +I +S GV + +
Sbjct: 135 PEARVLFTGGSGRL-FGAEIPEARIAREILVSAGVDPA-------------------RLI 174
Query: 96 IGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII-- 153
+ ++ NT NA+ A A L+VT +HMPR+ +P+P
Sbjct: 175 LEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRSVETFCAAGWQ-NLVPWPTDYR 233
Query: 154 SHDLEENSSI---FKIKILRVLLIEYLKILLLSI 184
+ L + + +L V + E++ IL +
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRV 267
>gi|301156135|emb|CBW15606.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 247
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 30/142 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIR---------IERAFEL--------LENQIGEKIFISG 69
+ + D+ AIV+L G +R A +L L+ + + I+G
Sbjct: 68 DHLTLQDYQQAQAIVLL-GGGLRDSKELYAPLASTAIQLERLRYAAFLQKETHLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ ++ + L + I KAL T+ NA EK H ++
Sbjct: 127 ASPTGAIEAKIAAEELQNFFNVPTKW------IEPKALTTKENALFTKQMLEKEGIHKII 180
Query: 124 IVTHDYHMPRTFLELQRINSTV 145
+VT+++HM R L Q+ V
Sbjct: 181 LVTNEWHMQRAKLLFQQQGFDV 202
>gi|298370494|ref|ZP_06981810.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281954|gb|EFI23443.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 220
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 23/187 (12%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELL 57
+ ++ G + + +P + A VVL G RI A L
Sbjct: 24 ILLVLAVFAGNVWQVYRTGNQTLPAAATADAAVVL-GAAAWNKQPSPVFLERINHAIALY 82
Query: 58 ENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWA 114
++ KI +G +++ + ++ ++Q + I + NT N +
Sbjct: 83 QSHRVGKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAKNILFENTSRNTYENLRNIKPIL 142
Query: 115 EKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
N+ ++IV+ YH+ R + ++ + P D E R L
Sbjct: 143 RANSVDSIIIVSDPYHLARAQAIARDLDLNAEVSATPTTRFDAREKKG-------RFLFQ 195
Query: 175 E-YLKIL 180
E YL L
Sbjct: 196 ESYLLFL 202
>gi|46143233|ref|ZP_00135637.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207969|ref|YP_001053194.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae L20]
gi|126096761|gb|ABN73589.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 252
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM R + +R V
Sbjct: 184 IILVTNQWHMKRAKMLFEREGFNV 207
>gi|313669320|ref|YP_004049604.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006782|emb|CBN88252.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 218
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FQERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|241888952|ref|ZP_04776256.1| integral membrane protein [Gemella haemolysans ATCC 10379]
gi|241864201|gb|EER68579.1| integral membrane protein [Gemella haemolysans ATCC 10379]
Length = 345
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIER 52
Y + GL V L F + + V + + +VVL RI +
Sbjct: 135 YSYVGLVV-LYFLCIAMSYLVSSVLNIINILPRRIDYVVVLGAGLIGERVTPLLASRIRK 193
Query: 53 AFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQE 109
+ + G K+ +SG VS+ ++ Q + E I + K+ +TE N
Sbjct: 194 GINVYKANPGSKLIMSGGQGPDEVVSEAFAMKNYAFEQGVDENDIILEDKSTSTEENIIF 253
Query: 110 ASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ + + +VT+ YH+ R ++ + +
Sbjct: 254 SKKFIPAD--KSFAVVTNYYHVYRALVQARTLG 284
>gi|295397171|ref|ZP_06807275.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294974593|gb|EFG50316.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 193
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 59/184 (32%), Gaps = 16/184 (8%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R + + + ++G I+ + IVV G R A +LLE
Sbjct: 7 VRLAGFFAGIMIAIGLLGVITLSNLIVDEEP---RVSDIIVVPEGASERAGEAVDLLEAG 63
Query: 61 IGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKN 117
SG V + L ++ I+ G A +T NA+ ++
Sbjct: 64 YSR----SGKIIVSPLTQSN--LDFYVGAGAPSDALINEG-NATSTYTNARNTLKMMQEL 116
Query: 118 NFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIE 175
+ +I + DYHM R E Q + E + ++ R L E
Sbjct: 117 GYDSAVITSSDYHMLRTKMIYERQNRHYGFDLTYVATYHDVAGEEVTWWQANR-RAGLSE 175
Query: 176 YLKI 179
K
Sbjct: 176 IRKF 179
>gi|224373337|ref|YP_002607709.1| hypothetical protein NAMH_1317 [Nautilia profundicola AmH]
gi|223588336|gb|ACM92072.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 240
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 29/211 (13%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVKQMHIPDHPSVSAIVVLTGEPI----------- 48
+ ++ V L F++ + ++ + D + SA+VVL G
Sbjct: 33 KIVFFSAAVLLWAISTKFVANALLYPLEHGYKSDTITPSAVVVLGGGTNSRDVLKAMPDA 92
Query: 49 --RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIG----YKALN 102
R + + + IF G ++ + ++K I L C DI ++LN
Sbjct: 93 FKREVYGLLIAKQESLPYIFTGGGIQNIKEAENIKK-DIDMILKTCNCDIETFYENRSLN 151
Query: 103 TEGNAQEASAWAEKNNF-HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPI-ISHDLEEN 160
T NA+ + EK N + +VT YHM R + Q IP P+ +D E
Sbjct: 152 TFQNAKYTAKLFEKLNLSKKIYLVTSAYHMKRAIMIFNNF--GFQIIPKPVGFYYDNEYT 209
Query: 161 SSIFKIKILRV-----LLIEYLKILLLSIQL 186
+ EY ++ +++
Sbjct: 210 FWDIFPNAGNFYHSYKAIHEYFGLIKTYLRI 240
>gi|115525420|ref|YP_782331.1| hypothetical protein RPE_3419 [Rhodopseudomonas palustris BisA53]
gi|115519367|gb|ABJ07351.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 267
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 29/186 (15%)
Query: 32 PDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHHSV 74
+ + IVVL G R+ +L +I +G +
Sbjct: 74 AEGRAPDGIVVLGGSIDSDISAARNALETDASAERVFAMLDLARRYPNARIVFTG-GSAN 132
Query: 75 SKDILLQKIPIRQDLAEC------CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
+ P+ L E I + + T NA L+VT
Sbjct: 133 LIGDTAAEAPVAGQLLEQFGIAPDRIVLESGSRTTAENATMTRDLVAPKPGERWLLVTSA 192
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF---KIKILR--VLLIEYLKILLLS 183
+HMPR+ + I V+ P + + F + R V + E++ ++
Sbjct: 193 FHMPRSIGVFRAIGFEVEAYPVDWRTRGWIDLRWPFGKLSAGLARIDVAVHEWVGLIAYR 252
Query: 184 IQLSLS 189
+ ++
Sbjct: 253 LTGRIA 258
>gi|34499564|ref|NP_903779.1| hypothetical protein CV_4109 [Chromobacterium violaceum ATCC 12472]
gi|34105415|gb|AAQ61770.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 199
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 26/197 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH-PSVSAIVVLTGEP-----------I 48
+R G + ++ ++GF + D P A +VL G
Sbjct: 4 LRLMLRGFLLAVLLVVLGFACVAWSIVDYGSGDEVPGADAALVL-GAAAWGNKPSPVFRE 62
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKALNTEG 105
RI A +L ++ I +G + + ++ RQ + + + ++ T
Sbjct: 63 RINHAVKLYQSGKVRWIVFTGGTPEPGYPAEADVGREFAARQGVPMTAMLVENQSRTTWQ 122
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
N A + L+V+ HM R L + ++ P P S +S
Sbjct: 123 NLSNARDLGNQFGIRSYLLVSDPLHMRRAV--LMAGDLGLRAYPAPTQSSRFRTLASWS- 179
Query: 166 IKILRVLLIE---YLKI 179
R L E Y+
Sbjct: 180 ----RFLARETWLYVGY 192
>gi|218440733|ref|YP_002379062.1| hypothetical protein PCC7424_3813 [Cyanothece sp. PCC 7424]
gi|218173461|gb|ACK72194.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 194
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 11/157 (7%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + L +G + ++ + AI+VL G R A L I++
Sbjct: 20 VMILLPLLTVGSWWSYKQIQSYLVKPE----AILVLGGHEERERFAAHLAAKNPQLPIWV 75
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S S + + D + YKA +T N + V ++T
Sbjct: 76 SSGSPSNYVKRIFANAGVNSDRLH----LDYKAKDTVTNFTTLVDKLKAQGIDSVYLITS 131
Query: 128 DYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSS 162
+ HM R + E+ + + P + S S
Sbjct: 132 ENHMRRARIIGEIVFGSRGIIIKPVAVPSDA-PSESW 167
>gi|322804976|emb|CBZ02535.1| sana protein [Clostridium botulinum H04402 065]
Length = 222
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 31/172 (18%)
Query: 8 LFVCLIFFIMGFIS--FIRYVKQMH-------IPDHPSVSAIVVLTGE------------ 46
L V + +MG + FI + + D P AI+VL G
Sbjct: 9 LVVIMAIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCDML 67
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTE 104
R+ +L +N +K+ SG H V+ D + ++K+ ++ + + I + + +T
Sbjct: 68 EDRVAVGIDLYKNNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTY 127
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ A + ++IVT YH+ R +++ Y + S
Sbjct: 128 ESMYRAKEIFKAKK---IIIVTQQYHLMRAVYIARKLGLD----AYGVNSDQ 172
>gi|261401556|ref|ZP_05987681.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269208394|gb|EEZ74849.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|332528861|ref|ZP_08404835.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
gi|332041720|gb|EGI78072.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 12/157 (7%)
Query: 42 VLTGEPIRIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDI 96
L R+ A LL+ + + +G S+ ++ + Q + + +
Sbjct: 101 ALNSAAERLTAALPLLQREPRLVLLYTGGEGELLASGPSEAERARRFYVEQGVPPARLLL 160
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ NT NA ++A + L++T +HMPR+ ++ V P+P
Sbjct: 161 ESASRNTHDNAVFSAALPGVDRTRPWLLITSAWHMPRSLRTFRKAGWNVT--PWPTDYRA 218
Query: 157 LEENSSIFK-----IKILRVLLIEYLKILLLSIQLSL 188
++ L E L + ++ L
Sbjct: 219 GLTTPWHQYSLSQGAAKWQLALHELLGLAAYRLRGWL 255
>gi|161524938|ref|YP_001579950.1| hypothetical protein Bmul_1765 [Burkholderia multivorans ATCC
17616]
gi|160342367|gb|ABX15453.1| protein of unknown function DUF218 [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 32/203 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ FI + + + +HP + ++VL R +
Sbjct: 65 RRIALAAVALFWLIASGWLAAPFIAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 124
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 125 PPRDGAARIRKAAELYRSCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGVDPGDL 184
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 185 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 240
Query: 155 HDLEENSSIFKIKILRVLLIEYL 177
+ E + + V+ E+
Sbjct: 241 NRREAQTGWL-PRWSNVVATEFA 262
>gi|261391563|emb|CAX48996.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
Length = 218
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIDSVVIVSDPYHLARA 162
>gi|229156674|ref|ZP_04284762.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
gi|228626843|gb|EEK83582.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
Length = 219
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGVENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|309379839|emb|CBX21615.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|83593886|ref|YP_427638.1| hypothetical protein Rru_A2551 [Rhodospirillum rubrum ATCC 11170]
gi|83576800|gb|ABC23351.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 206
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 18/160 (11%)
Query: 23 IRYVKQMHIPDHPSVS--AIVVL------TGEPI-----RIERAFELLENQIGEKIFISG 69
+ P + A+VVL G P R+ L ++ +SG
Sbjct: 12 AEETDRAFPPAGRAGEGCAVVVLGARVLGDGRPSPALERRVLHGVALARRHPAARLLLSG 71
Query: 70 VHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
D ++ + + +A + + +AL+T GNA+ + VL+VT
Sbjct: 72 GATGGPLDEAWVMATLALGAGIAAERLILEDRALDTLGNARHSLPLLRAARIGRVLLVTD 131
Query: 128 DYHMPRTFLELQRINST---VQFIPYPIISHDLEENSSIF 164
HMPR L + + ++ P P + +IF
Sbjct: 132 PSHMPRALLSFRAVAGDHLRLRAAPTPCPAGGWRNRRAIF 171
>gi|93007196|ref|YP_581633.1| hypothetical protein Pcryo_2372 [Psychrobacter cryohalolentis K5]
gi|92394874|gb|ABE76149.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 259
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 28/201 (13%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ---MHIPDHPSVSAIVVLTGE----------P 47
+ WYGL++ +++ F F+ ++Q P V+AI+VL
Sbjct: 62 LSRLWYGLWMVFFIWLISFGIFVYALQQQIKQSAKPIPRVAAIIVLGSGTVAGKPTPTLA 121
Query: 48 IRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQ-DLAECCIDIGYKALNT 103
R++ A L+ +Q G + SG + S+ ++ D+ I ++ +T
Sbjct: 122 KRLDTAAPLINSQKGALVITSGGIGFGQTHSEAYIMATYLYDTYDIPLKHILQEGQSTST 181
Query: 104 EGNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFLELQR---INSTVQFIPYPIISHDL 157
N + + IVT D+H+ R + + T+ P P+ +
Sbjct: 182 AENLIYSQEILAAKGISIKAPIAIVTSDFHIIRAANIARHQGYVQPTMLASPTPL---SI 238
Query: 158 EENSSIFKIKIL--RVLLIEY 176
N+ + L EY
Sbjct: 239 RYNAWFREYFAFVSGWLFGEY 259
>gi|116624473|ref|YP_826629.1| hypothetical protein Acid_5395 [Candidatus Solibacter usitatus
Ellin6076]
gi|116227635|gb|ABJ86344.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 195
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 18/177 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISF-IRYVKQMHIPDHPS-VSAIVVLTGEPI----------- 48
R W G+ + + +M +++F ++Q + + I+VL G
Sbjct: 3 RLLWNGIALAAVV-VMFYVAFLSLRIEQQSVREEAQPADVILVL-GAAEYRGRPSPVLRA 60
Query: 49 RIERAFELLENQIGEKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ A +L + +I SG ++ + + + + I + + +T
Sbjct: 61 RLDHALDLYSRKFAPRILTTGGSGGDPIFTEGGVGRSYLTQHGVPSDAIIVETEGESTVE 120
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSS 162
+ A+ + H V++V+ YH+ R L+ T P P S
Sbjct: 121 STTMAAEIMRRMELHSVIVVSDGYHIYRVKQMLEAHGMTAYGSPRPDHSQSPLHLRW 177
>gi|167894539|ref|ZP_02481941.1| hypothetical protein Bpse7_12379 [Burkholderia pseudomallei 7894]
Length = 240
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLENQIGEKI----FISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|42782182|ref|NP_979429.1| hypothetical protein BCE_3127 [Bacillus cereus ATCC 10987]
gi|42738107|gb|AAS42037.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 210
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGTENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|196228088|ref|ZP_03126955.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196227491|gb|EDY21994.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 29/148 (19%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP----------------IRIERAFELLENQIGEKIFISG- 69
+ I + P AIV+L G R+ A E+ + + G
Sbjct: 70 AGVKIDELPKADAIVMLGGGSAPSRYEALGVHLTQAGDRLVMAHEVYRLGKAPVLLLGGN 129
Query: 70 VHH--------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
V+ S L + I +D I +G + +T A + +A A+++ +H
Sbjct: 130 VNKLDGVRKFESEIVRDLFKTWGIPEDAM---IPLG-ENQDTHDEALKTAALAKEHGWHR 185
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIP 149
VL+VT HM R L+ V +P
Sbjct: 186 VLLVTSASHMRRASGVLRAQGLEVIPVP 213
>gi|76811194|ref|YP_333307.1| hypothetical protein BURPS1710b_1908 [Burkholderia pseudomallei
1710b]
gi|126441655|ref|YP_001058770.1| hypothetical protein BURPS668_1731 [Burkholderia pseudomallei 668]
gi|167738833|ref|ZP_02411607.1| hypothetical protein Bpse14_12248 [Burkholderia pseudomallei 14]
gi|167911178|ref|ZP_02498269.1| hypothetical protein Bpse112_11843 [Burkholderia pseudomallei 112]
gi|167919203|ref|ZP_02506294.1| hypothetical protein BpseBC_11665 [Burkholderia pseudomallei
BCC215]
gi|217423472|ref|ZP_03454973.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254259791|ref|ZP_04950845.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76580647|gb|ABA50122.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126221148|gb|ABN84654.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|217393330|gb|EEC33351.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254218480|gb|EET07864.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 240
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLENQIGEKI----FISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ +R F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|148378651|ref|YP_001253192.1| exported protein [Clostridium botulinum A str. ATCC 3502]
gi|153933579|ref|YP_001383034.1| putative sanA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934960|ref|YP_001386583.1| putative sanA protein [Clostridium botulinum A str. Hall]
gi|226947902|ref|YP_002802993.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
gi|148288135|emb|CAL82203.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152929623|gb|ABS35123.1| putative SanA protein [Clostridium botulinum A str. ATCC 19397]
gi|152930874|gb|ABS36373.1| putative SanA protein [Clostridium botulinum A str. Hall]
gi|226841482|gb|ACO84148.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
Length = 222
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R F + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H + D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|237711018|ref|ZP_04541499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750614|ref|ZP_06086677.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454862|gb|EEO60583.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237510|gb|EEZ22960.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 252
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 14/157 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL---------LQKIPIRQDLAECCIDIG 97
R+ L ++ K+ ++ + +++ + + +
Sbjct: 95 ADRLLEGIRLYKHGRIRKLVLASDGSIIESKDGKGLQGNAADMKQYLADLGMPLEDVILE 154
Query: 98 YKALNTEGNAQEASAWA-EKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFI-PYP-I 152
+A NT NA L++T HM R+ +P I
Sbjct: 155 TRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNPDTYITDTFPEI 214
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
S + L E++ L ++ S
Sbjct: 215 KGEKTNFLPSWHVLASWPELTHEWVGYLYYRLRHKPS 251
>gi|254719238|ref|ZP_05181049.1| hypothetical protein Bru83_06801 [Brucella sp. 83/13]
gi|265984234|ref|ZP_06096969.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837987|ref|ZP_07470845.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
gi|264662826|gb|EEZ33087.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406911|gb|EFM63132.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
Length = 264
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGDRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|121635807|ref|YP_976052.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120867513|emb|CAM11290.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|254672612|emb|CBA06344.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|325131248|gb|EGC53960.1| hypothetical protein NMBM6190_2077 [Neisseria meningitidis M6190]
gi|325137422|gb|EGC60010.1| hypothetical protein NMBES14902_2053 [Neisseria meningitidis
ES14902]
Length = 218
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIDSVVIVSDPYHLARA 162
>gi|167746537|ref|ZP_02418664.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|317471356|ref|ZP_07930711.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|167653497|gb|EDR97626.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|316901162|gb|EFV23121.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 228
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 30/172 (17%)
Query: 2 RYF-WYGLFVCLIFF----IMGFISFIRYVKQMHIPDHP---------SVSAIVVL---- 43
R+ W L + LIF G F+ + + I A+VVL
Sbjct: 7 RWSRWLKLLLILIFAGILTAGGINWFMIHQSKKDIETARQLALEQKGKKADAVVVLGAKV 66
Query: 44 --TGE-----PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCI 94
G R++ + + + ++I +SG H + D + ++ I+Q + I
Sbjct: 67 RKDGSMCLMLKERVDLGIQAYKQGLADRIIMSGDHGAEGYDEVSTMKAYAIKQGIPSEHI 126
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ +T A + +++VT YH+ R + + + V+
Sbjct: 127 FKDHAGFSTYETMYRARDVFKA---KSIVVVTQKYHLYRAVYDAKALGLEVK 175
>gi|225386502|ref|ZP_03756266.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
gi|225047421|gb|EEG57667.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
Length = 253
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 22/161 (13%)
Query: 26 VKQMHIPDHPSVSAIVVL------TGEPI-----RIERAFELLENQIGEKIFISGVHHSV 74
V + V I+VL G P R+ + L + +++ +SG H V
Sbjct: 67 VTPEQAAELDKVDCILVLGCGVRDDGSPSGMLNDRLLQGIALYNAGVSDRLLMSGDHGRV 126
Query: 75 SKDI--LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
D L+++ I + I + + +T + A + +++VT +YHM
Sbjct: 127 DYDEVNLMKQFAIDHGVPSEDIFMDHAGFSTYESMYRARDIFQAE---RIVVVTQEYHMY 183
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
R ++ Y + S + KI+ R +L
Sbjct: 184 RALYNAGQMGMD----AYGVASDPRKYGG--QKIRDAREML 218
>gi|89096104|ref|ZP_01168997.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
gi|89088958|gb|EAR68066.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
Length = 226
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 17/175 (9%)
Query: 33 DHPSVSAIVVLTGEPI-----RIERAFELLENQIGEKIFISG----VHHSVSKDILLQKI 83
D S I VL R+ +A EL + K+ SG + + LL++
Sbjct: 49 DKKSGECIFVL--GSSKAAEYRLPKALELYNSGRAGKLLFSGGVVWAPSRLCEAELLKEK 106
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEK----NNFHHVLIVTHDYHMPRTFLELQ 139
+ + I I ++L+T+ N + ++ + +L+VT H+ R +L ++
Sbjct: 107 ALALGIPAADILIENQSLHTKENVLASLLVLDREFNLHKIKRILVVTASCHIRRAYLAMK 166
Query: 140 RINST-VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTA 193
+++ P+ E + E K L+ ++ + T
Sbjct: 167 TYMPDWIEYSLCPVDDIHTIEGNWQLSEAGRLRAKREAEK-LIYYVKQGIIIDTE 220
>gi|220910044|ref|YP_002485355.1| hypothetical protein Cyan7425_4689 [Cyanothece sp. PCC 7425]
gi|219866655|gb|ACL46994.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 262
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 40/206 (19%)
Query: 21 SFIRYVKQMHIPDH-PSVSAIVVLTGE----------------PIRIERAFELLENQIGE 63
++ ++ ++P P+ +AIVVL G R+ A +L +
Sbjct: 59 WLLQTLETQNLPGSLPNAAAIVVLGGAIKGADPPRPWIEVAEAGDRLLYAAKLYRDGKAP 118
Query: 64 KIFISG-------VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ +SG + + + + + + +LNT NA ++
Sbjct: 119 LVILSGGRISWLSTATAAPESADMAILIETMGVPASALLQDSTSLNTYQNAVNVQKILKE 178
Query: 117 NNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD-------------LEENSS 162
N +L+VT +HMPR R+ + I P H L S
Sbjct: 179 KNITGSILLVTSAFHMPRALAIFNRL--GIPAIAAPTDFHTTQTAELSGAIGFLLSLLPS 236
Query: 163 IFKIKILRVLLIEYLKILLLSIQLSL 188
++ + L EY+ +++ ++ L
Sbjct: 237 AETLQNTTLALKEYVGLVVYRLRGWL 262
>gi|312892082|ref|ZP_07751582.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311295454|gb|EFQ72623.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 260
Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 30/188 (15%)
Query: 26 VKQMHIPDHPSVSAIVV-------------LTGEPIRIERAFELLENQIGEKIFISGVH- 71
+ Q P+ AIV+ G R + +L I +SG +
Sbjct: 64 ITQGPPPEGKYSCAIVLGGFSSADQDGNGYFNGSADRFIKTLQLKVTGRVPLILMSGGNG 123
Query: 72 -----HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF-HHVLIV 125
++ + + ++ + CI I ++ NT NA L+V
Sbjct: 124 QLIKTSNLKEADYVFSQFKAFNIPDSCIMIENQSRNTLENAMFTKRILIDKKVPGPYLLV 183
Query: 126 THDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK--------IKILRVLLIEYL 177
T +HM R+ ++I + PYP + S+ + + + E +
Sbjct: 184 TSAFHMRRSAYIFKKI--GINVTPYPCDFIAGKSAVSLSDFIIPDPLALAQWNIYIKEVV 241
Query: 178 KILLLSIQ 185
+ ++
Sbjct: 242 GFVAYYLK 249
>gi|190149832|ref|YP_001968357.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307249724|ref|ZP_07531703.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307263153|ref|ZP_07544774.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914963|gb|ACE61215.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306858232|gb|EFM90309.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306871515|gb|EFN03238.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIIAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM R + +R V
Sbjct: 184 IILVTNQWHMKRAKMLFEREGFNV 207
>gi|253584074|ref|ZP_04861272.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834646|gb|EES63209.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQKIPIRQDLAECCIDIGYKAL 101
G RI + + N+ +KI++SG S+ + ++ I + I I K+
Sbjct: 102 GANTRIMKTAQFY-NKYPKKIYVSGGTPLQNKESESSVYKRELIGLGVPAEDIVIEEKSR 160
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
NT+ NA E+ +++T +HMPR+ + + F P P E
Sbjct: 161 NTKENAVYIKKMMEEAKEKKAVLITSAFHMPRSVKTFDKGEEGLIFYPAPCDFMAKSETE 220
Query: 162 SIFKI-------KILRVLLIEYLKILLLSIQ 185
+ F K L +LL EY+ ++ I+
Sbjct: 221 NFFDYIPKYVNFKKLGLLLKEYIGMVYYKIR 251
>gi|229097607|ref|ZP_04228566.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
gi|229106282|ref|ZP_04236779.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|229116606|ref|ZP_04245993.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228666916|gb|EEL22371.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228677137|gb|EEL31517.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|228685877|gb|EEL39796.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
Length = 219
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIHSYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|168178023|ref|ZP_02612687.1| putative sanA protein [Clostridium botulinum NCTC 2916]
gi|182670781|gb|EDT82755.1| putative sanA protein [Clostridium botulinum NCTC 2916]
Length = 222
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 27/174 (15%)
Query: 2 RYFWYGLFVCLIF-FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE---------- 46
R F + + L+ + FI F + ++ D P AI+VL G
Sbjct: 7 RMFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCD 65
Query: 47 --PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALN 102
R+ +L +N +K+ SG H + D + ++K+ ++ + + I + + +
Sbjct: 66 MLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMKKVAEKKGVKKEDIFLDHAGFS 125
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
T + A + ++IVT YH+ R I + Y + S
Sbjct: 126 TYESMYRAKEIFKAKK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 172
>gi|15644422|ref|NP_229474.1| hypothetical protein TM1674 [Thermotoga maritima MSB8]
gi|4982249|gb|AAD36741.1|AE001808_16 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 237
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L + F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAAIVYLFSSYVGEFLFLWPLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGV--HHSV---------------SKDILLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + S+ ++++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRSEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R +R +V P
Sbjct: 151 RNTYENALFTRE---KIGDVPIILVTDSIHMRRAVFTFKRFFQSVTPYP 196
>gi|325135386|gb|EGC58007.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325201201|gb|ADY96655.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207058|gb|ADZ02510.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|307260971|ref|ZP_07542653.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869273|gb|EFN01068.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 252
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 17/140 (12%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIGEKIF 66
+ + +++ I D+ AIVVL G R I A L Q G I
Sbjct: 68 VTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTGLPIL 127
Query: 67 ISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++G + D + + + TE NA + A ++ +++V
Sbjct: 128 VTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILV 187
Query: 126 THDYHMPRTFLELQRINSTV 145
T+ +HM R + +R V
Sbjct: 188 TNQWHMKRAKMLFEREGFNV 207
>gi|170078552|ref|YP_001735190.1| hypothetical protein SYNPCC7002_A1947 [Synechococcus sp. PCC 7002]
gi|169886221|gb|ACA99934.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 218
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKI 65
+ LI G I++ R + AI VL G R A + + K+
Sbjct: 25 RWFVLGLIGLTCGAIAYQRIQGALRP-----AKAIFVLGGHEERERFAAQFAQEHPDLKV 79
Query: 66 FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIV 125
++S + I D + + Y+A +T N ++ N V ++
Sbjct: 80 WVSSGSPPEYARQIFANYQIEGDRLQ----LDYQAEDTVTNFTSLVDEFKQENIDSVYLI 135
Query: 126 THDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENS 161
T + HM R L + + P P+ S + E +
Sbjct: 136 TSENHMNRAKLVASIVFGTRDIAIKPVPVPSDNPPETT 173
>gi|254804041|ref|YP_003082262.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
gi|254667583|emb|CBA03327.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
Length = 218
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|291278482|ref|YP_003495317.1| hypothetical protein DEFDS_0049 [Deferribacter desulfuricans SSM1]
gi|290753184|dbj|BAI79561.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 237
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 18/165 (10%)
Query: 38 SAIVVLTGEP-----------IRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIP 84
A+V+L G R+ + L+ + + I +SG V ++ + L+ +
Sbjct: 74 DAVVILGGGVYADGELKEDSLKRLVEGY-LIAKKANKPIILSGGKVFKNLEPESLIMRNK 132
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT--FLELQRIN 142
+ + I I + +T NA NNF+ VL++T YH R+ E IN
Sbjct: 133 LLNLGFDGEIFIDDTSKDTNENATFVKKIIAANNFNKVLLITSGYHAMRSKMLFEKHGIN 192
Query: 143 STVQFIPYPIISHD--LEENSSIFKIKILRVLLIEYLKILLLSIQ 185
S V + I ++ + + ++ EYL IL S++
Sbjct: 193 SCVVLVDKKIDKKYNFVDFLPVASNLHTISKVIKEYLGILYYSMK 237
>gi|323493229|ref|ZP_08098358.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
gi|323312495|gb|EGA65630.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
Length = 267
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRIYPGAKLILSGYAAGSEVSNARMMAKVALALGVAKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ +++VT HM R E PY ++ L ++
Sbjct: 165 WEEARQAAAFVSTKK---LVVVTSASHMKRALNEFHSAG----LKPYAAPTNYLAHDN 215
>gi|37680486|ref|NP_935095.1| hypothetical protein VV2302 [Vibrio vulnificus YJ016]
gi|320155855|ref|YP_004188234.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423949|ref|NP_760999.2| membrane protein [Vibrio vulnificus CMCP6]
gi|37199234|dbj|BAC95066.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931167|gb|ADV86031.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus MO6-24/O]
gi|319999327|gb|AAO10526.2| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus CMCP6]
Length = 266
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ +L+ G K+ +SG S ++ + + +A+ I + A +T
Sbjct: 108 RLTEGIRILKMYPGSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLEDAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E P P ++ L + +
Sbjct: 168 ARQAAAFVRQKQ---LVLVTSASHMARAMKEF----HDAGITPLPAPTNYLAQKN 215
>gi|167587349|ref|ZP_02379737.1| hypothetical protein BuboB_18529 [Burkholderia ubonensis Bu]
Length = 224
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 57/187 (30%), Gaps = 33/187 (17%)
Query: 6 YGLFVCLIFFIMGFISFIRYV-----KQMHIPDHPSVSAIVVL----------------- 43
+F+++ + + +HP + VL
Sbjct: 10 IAAVAFALFWLLATGWLAAPLIAWSQAGVTPVEHPDMHGQTVLILLGTGTRRIDGRLEPR 69
Query: 44 TGEPIRIERAFELLEN--QIGEK--IFISGVHHS---VSKDILLQKIPIRQDLAECCIDI 96
T RI + L + Q E+ + +SG ++ + + + + +
Sbjct: 70 TDGFPRIRKTAALYRDCRQRAERCTVIVSGGDPERHGATEAATYAPYLVARGVDPRDLML 129
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
+ T NA+ + + ++VT Y M R L+ + Q P+ ++
Sbjct: 130 EANSRTTYENAKFTTPILRSRHVDATILVTSSYQMRRALLDFRHFGIDAQ----PVYANR 185
Query: 157 LEENSSI 163
+ +
Sbjct: 186 RDAQTGW 192
>gi|294507679|ref|YP_003571737.1| hypothetical protein SRM_01864 [Salinibacter ruber M8]
gi|294344007|emb|CBH24785.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 180
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
I + K+ NT NA + ++ + VL+VT HMPR + P +
Sbjct: 56 ILLESKSANTYENATRTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAPTDVQ 115
Query: 154 SHD-----LEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTAS 194
D L+ + + EY+ L+ + + S
Sbjct: 116 VGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYDWRGWIDGPAGS 161
>gi|226364924|ref|YP_002782706.1| hypothetical protein ROP_55140 [Rhodococcus opacus B4]
gi|226243413|dbj|BAH53761.1| hypothetical protein [Rhodococcus opacus B4]
Length = 185
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 5/138 (3%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPI 85
+ H+ V AI+VL G+ R E EL + +S H D + +
Sbjct: 31 SKSHVDPMRPVDAIIVLGGDRDGREEYGIELAREGFSTNVVLS--HPYWKGDRKMAEFCA 88
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTV 145
QD + + T G A A ++ + VL+++ YH+PR +
Sbjct: 89 IQDQRFTVTCVPPQPRTTRGEALFTRDLAAQHGWTSVLVISWRYHLPRARYIFSQCFEG- 147
Query: 146 QFIPYPIISH-DLEENSS 162
+ + P+ D
Sbjct: 148 EIVMRPVPRDYDFSVAHW 165
>gi|304388801|ref|ZP_07370857.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304337253|gb|EFM03431.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 218
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|118591094|ref|ZP_01548493.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
gi|118436170|gb|EAV42812.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
Length = 265
Score = 61.8 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 53/171 (30%), Gaps = 23/171 (13%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-----------------VLTGEP 47
+ GL VC ++ + + I+ LT
Sbjct: 47 FAGLVVCAFSPAANWLIVPLEDRFQRPATLENYDGIIILGGAVDTVVTGVRGDTALTMSA 106
Query: 48 IRIERAFELLENQIGEKIFISG-----VHHSVSKDILLQKIPIRQDLAECCIDIGYKALN 102
R+ L + KI +G V ++ ++ +A I + ++ N
Sbjct: 107 ERVTITARLAKALPAAKIIHTGGQGMIVSSQATEAEGAARLFRDFGIAPERIILEDQSQN 166
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
T NA A + L+VT YHMPR+ ++ YP+
Sbjct: 167 TWQNAVYAKKIVQPQPGQRWLLVTSAYHMPRSMGVFEKAG-WTGVTAYPVD 216
>gi|116073939|ref|ZP_01471201.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
gi|116069244|gb|EAU74996.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
Length = 193
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 15/177 (8%)
Query: 2 RYFWY-GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
R+ W G + + + + + + P+ I+VL G+ R +L
Sbjct: 4 RWGWVAGAGLLGVVCALPLRPYHQALVTAQPPER-----ILVLGGDVDRERAGLQL---- 54
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
++ + V S + + L E + + Y+A +T GN +
Sbjct: 55 -ARRLNLPLVVSGGSNPEYAHWLMETEGLREGQVVLDYRANDTLGNFTSLVDDLREQGVQ 113
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPII--SHDLEENSSIFKIKILRVLL 173
HVL+VT + H+PR L + ++ P+ ++E+ LR L
Sbjct: 114 HVLLVTSEDHLPRALTVGSLVAGSRGIRLTGVPVSCGVDCVQESPGKRWGDGLRALA 170
>gi|121534257|ref|ZP_01666081.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
gi|121307027|gb|EAX47945.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
Length = 192
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 26 VKQMHIPDHPSVSAIVVL----------TGEPIRIERAFELLENQIGEKIFISGV---HH 72
V Q+ P+ I+VL T +R++ A +L + I +SG
Sbjct: 29 VGQLAKPEP--GDVIIVLGAKLIGHEPSTMLRLRLDEAAKLYQAGYAPFIIVSGAQGCDE 86
Query: 73 SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
+S+ ++ I + I + K+ NT+ N + A ++ +IV++ H+
Sbjct: 87 VISEAAAMRNYLIAHGVPADRILLEDKSFNTQQNLANSLAIMREHGLQRAIIVSNASHIR 146
Query: 133 RTFLELQRINSTVQFIPYPIISHD 156
R + + P P+ ++
Sbjct: 147 RALVIAHNLGMEASGAPAPMANNA 170
>gi|303252155|ref|ZP_07338323.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247491|ref|ZP_07529536.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648938|gb|EFL79126.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855994|gb|EFM88152.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 252
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|218767273|ref|YP_002341785.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121051281|emb|CAM07557.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319409538|emb|CBY89825.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
Length = 218
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|221197747|ref|ZP_03570793.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204695|ref|ZP_03577712.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221214890|ref|ZP_03587858.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221165117|gb|EED97595.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221175552|gb|EEE07982.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181679|gb|EEE14080.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 238
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ F+ + + + +HP + ++VL R +
Sbjct: 22 RRIALAAVALFWLIASGWLAAPFVAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 81
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 82 PPRDGAARIRKAAELYRTCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGIDPGDL 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 142 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 197
Query: 155 HDLEENSSI 163
+ E ++
Sbjct: 198 NRREAHTGW 206
>gi|294085382|ref|YP_003552142.1| hypothetical protein SAR116_1815 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664957|gb|ADE40058.1| DUF218 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 264
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 44/223 (19%)
Query: 2 RYFWYGLFVCLIF-FIMGFI-------SFIRYVKQMHIPDHPSVSAIVVL---TG----- 45
R+ V +I + GFI F+ + I + + I++L TG
Sbjct: 36 RWARMFTIVAVILPLLYGFIPLSHIPLQFLENRFDVPILEGRPLDGIIILGGHTGNGEIS 95
Query: 46 ----------EPIRIERAFEL---------LENQIGEKIFISGVHHSVSKDILLQKIPIR 86
R A L L + ++ G + + LL ++ +
Sbjct: 96 EGRGQPQLSAAAERFTTALHLHRQFPDLPILFSGFSGELMPKGWSETQTIKRLLDELGMA 155
Query: 87 QDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQ 146
+ I + NT NA + ++VT HMPR +
Sbjct: 156 ESP---NILFESTSRNTYENALYSETVLSPQPGSFWVLVTSASHMPRAVGSFRNAGWG-G 211
Query: 147 FIPYPIISHDLEEN-----SSIFKIKILRVLLIEYLKILLLSI 184
IPYP+ L + + + ++ EY + +
Sbjct: 212 VIPYPVDYQTLPSGFPYIWNLPRGLHTMTIVFHEYAGLFAYWL 254
>gi|308388228|gb|ADO30548.1| putative periplasmic protein [Neisseria meningitidis alpha710]
Length = 214
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|289209654|ref|YP_003461720.1| hypothetical protein TK90_2494 [Thioalkalivibrio sp. K90mix]
gi|288945285|gb|ADC72984.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 43/192 (22%)
Query: 27 KQMHIPDHPS---VSAIVVLTGE--------PIRIERAFELLENQIGEKI--------FI 67
+ PD AIVVL L+ + + +
Sbjct: 28 EGFAPPDDNQLADAQAIVVLGAGYRSGAEEFSGETVHDLALVRLRYAAYLHHRTGLPVMV 87
Query: 68 SGVHHSVSK------DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
SG +L++ + L E A +T GNA+ ++
Sbjct: 88 SGGGPEERVPEADYMAEVLKEYGVHPILRE------PNARDTWGNARHSAEQLHAEGIER 141
Query: 122 VLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIK--------ILRVLL 173
V +V+H +HMPR +R ++ IP P ++ +N + + L
Sbjct: 142 VALVSHAHHMPRATWSFERA--GLEIIPAPTGAYVPRDNGWSLEGFRPQASAVWASWLAL 199
Query: 174 IEYLKILLLSIQ 185
EY + +
Sbjct: 200 HEY--WGMAWYR 209
>gi|307151691|ref|YP_003887075.1| hypothetical protein Cyan7822_1814 [Cyanothece sp. PCC 7822]
gi|306981919|gb|ADN13800.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 200
Score = 61.8 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 11/175 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+ +++ + + G+ S+ + P+ AIVVL G R A L
Sbjct: 14 LTLLRQIIYLLPVVSVGGWWSYNEIQSYLVKPE-----AIVVLGGHEERERYAAHLASKN 68
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S S + K + + YKA +T N +
Sbjct: 69 PTLPIWVSSGSPSNYVKRIFAKAGVNSTRLH----LDYKAKDTVTNFTTLVDQLKAQGID 124
Query: 121 HVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLL 173
V ++T + HM R ++ E+ + + P + SH E+ R LL
Sbjct: 125 SVYLITSENHMRRAWIVGEIVFGSRGIVIKPLAVPSHARPESFKKCLRDGARALL 179
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 61.4 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 18/157 (11%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVL----TGEP--------IRIERAFE 55
L + +I FI I + + ++VL G+P R++ A
Sbjct: 3 LILIVIGFIYLLIVAAFMFSGARAKPNGNADTVLVLGARVNGDPAEPSSVLKERLDTAVA 62
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L K+ +SG S S+ ++++ + Q +A I++ K+ TE N + +
Sbjct: 63 YLNENPTLKVIVSGGQGEDESASEASVMEEYLVNQGIARNRINVEDKSTRTEENLKYSK- 121
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
K N +IVT DYHM R + +R +P
Sbjct: 122 --GKFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLP 156
>gi|325143566|gb|EGC65887.1| hypothetical protein NMBM01240013_2108 [Neisseria meningitidis
M01-240013]
gi|325205110|gb|ADZ00563.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 218
Score = 61.4 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F F++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|228986175|ref|ZP_04146317.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773556|gb|EEM21980.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|229139714|ref|ZP_04268284.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
gi|228643845|gb|EEL00107.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|217960516|ref|YP_002339078.1| hypothetical protein BCAH187_A3129 [Bacillus cereus AH187]
gi|217066516|gb|ACJ80766.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|52142423|ref|YP_084406.1| hypothetical protein BCZK2819 [Bacillus cereus E33L]
gi|206974549|ref|ZP_03235465.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|222096575|ref|YP_002530632.1| epih/gdmh-related protein [Bacillus cereus Q1]
gi|51975892|gb|AAU17442.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|206747192|gb|EDZ58583.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|221240633|gb|ACM13343.1| EpiH/GdmH-related protein [Bacillus cereus Q1]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|47564233|ref|ZP_00235278.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
gi|47558385|gb|EAL16708.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
Length = 210
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|229197269|ref|ZP_04324000.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
gi|228586228|gb|EEK44315.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
Length = 219
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + + I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKDEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGVENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|15675952|ref|NP_273070.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|7225229|gb|AAF40483.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|316984529|gb|EFV63495.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325129274|gb|EGC52113.1| hypothetical protein NMBOX9930304_1979 [Neisseria meningitidis
OX99.30304]
gi|325139474|gb|EGC62014.1| periplasmic protein [Neisseria meningitidis CU385]
gi|325199239|gb|ADY94694.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 214
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|239787465|emb|CAX83936.1| conserved uncharacterized protein [uncultured bacterium]
Length = 258
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 19/174 (10%)
Query: 26 VKQMHIPDHPSVSAI-VVLTGEPIRIERAFELLENQIGEKIFISGVHH---SVSKDILLQ 81
+ P P V TG RI L + G I SG S+ L++
Sbjct: 86 LGHGRYPAAPEYDGADTVNTGGLARIRYG-AWLHRRTGLPILTSGGKPFQEKESEAQLMK 144
Query: 82 -----KIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ + E + NT NA+ HVL+VTH HM R
Sbjct: 145 RALEKEFGVPVRWTED------SSDNTLENARNTQKILAAQGIDHVLLVTHGNHMVRALQ 198
Query: 137 ELQRINSTVQFIP--YPIISHDLEENSSIF-KIKILRVLLIEYLKILLLSIQLS 187
+ + P + + + + + + V L EY+ L ++
Sbjct: 199 TFHQAGLKITPAPTLFQTPTPNAGILDWLPLSCRGVWVPLHEYVGRLWYQLRCG 252
>gi|229488511|ref|ZP_04382377.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229324015|gb|EEN89770.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 235
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 21/168 (12%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP------------IR 49
R+ + + + + + A VV+ R
Sbjct: 25 RWVAGIAVLGAVVYAGSIVWISVASAGHTSDAADAPDAPVVIVLGAQIKDGKPMAFLKGR 84
Query: 50 IERAFELLENQIGEKIFISGVHHSVSKDILLQKIP--IRQDLAECCIDIGYKALNTEGNA 107
++ A EL+E + + +SG + S D + + Q + I L+T
Sbjct: 85 LDAAVELVEAGKAKAVLVSGDANGGSGDEIAAMTNYLVEQGIDARRIVGDPYGLDTYDTC 144
Query: 108 QEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
A LIVT YH+PR + V + S
Sbjct: 145 FRA---IHTYGVTKALIVTQGYHVPRAV----ALCRDVGIDADGVNSD 185
>gi|254197234|ref|ZP_04903656.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|169653975|gb|EDS86668.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
Length = 240
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 49 RIERAFELLEN--QIGEK--IFISGVHHSVS---KDILLQKIPIRQDLAECCIDIGYKAL 101
RI++ EL + ++ + +SG V + + + +A + ++
Sbjct: 91 RIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSH 150
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA+ + ++ +++VT Y M R L+ + F P P+ ++ +
Sbjct: 151 TTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFEWFG----FAPQPVYANRRDARL 206
Query: 162 SI 163
Sbjct: 207 GW 208
>gi|110633611|ref|YP_673819.1| hypothetical protein Meso_1258 [Mesorhizobium sp. BNC1]
gi|110284595|gb|ABG62654.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 268
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 8/135 (5%)
Query: 41 VVLTGEPIRIERAFELLENQIGEKIFISG------VHHSVSKDILLQKIPIRQDLAECCI 94
+ LT R+ + E +I +SG + H ++ L +++ ++ + I
Sbjct: 102 IALTDAAERLTKTAEFNRLYPNARILLSGGINDLLITHDRTEAALARELLVKIGVPADRI 161
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
++ ++ NT NA E+ A A L+VT +HMPR + +PYP+
Sbjct: 162 ELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFRAA--GFPVLPYPVDY 219
Query: 155 HDLEENSSIFKIKIL 169
S +
Sbjct: 220 LARRSALSSLAPSVA 234
>gi|325203138|gb|ADY98591.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 218
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKHPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|189350313|ref|YP_001945941.1| hypothetical protein BMULJ_01475 [Burkholderia multivorans ATCC
17616]
gi|189334335|dbj|BAG43405.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 238
Score = 61.4 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 32/203 (15%)
Query: 2 RYFWYGLFVCLIFFIMGFIS--FIRYVK-QMHIPDHPSVSA---IVVLTGEPIRIERAFE 55
R G+++ FI + + + +HP + ++VL R +
Sbjct: 22 RRIALAAVALFWLIASGWLAAPFIAWAEAGVEPVEHPDMHGQTVLIVLGAGTQRADDGLR 81
Query: 56 LLENQIGEK------------------IFISGVHHSVSKDILLQKIP---IRQDLAECCI 94
+ + +SG D + + +
Sbjct: 82 PPRDGAARIRKAAELYRSCRRQAERCTVVMSGGDPQHHGDTEAAVYGRGLVAAGVDPGDL 141
Query: 95 DIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIIS 154
+ K+ T NAQ ++ +++T Y M R L+ +R P P+ +
Sbjct: 142 VLEPKSRTTYENAQFTTSILRSRRDDARILITSSYQMRRALLDFRRFGID----PQPVFA 197
Query: 155 HDLEENSSIFKIKILRVLLIEYL 177
+ E + + V+ E+
Sbjct: 198 NRREAQTGWL-PRWSNVVATEFA 219
>gi|148560243|ref|YP_001259097.1| hypothetical protein BOV_1136 [Brucella ovis ATCC 25840]
gi|148371500|gb|ABQ61479.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 268
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 52 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIVAGRQNFELNSAAD 111
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K NT
Sbjct: 112 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKLRNT 171
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 172 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 219
>gi|312963224|ref|ZP_07777708.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
gi|311282490|gb|EFQ61087.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
Length = 253
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 24/157 (15%)
Query: 36 SVSAIVVLTGEPIRIE--------RAFELLENQIGEKI--------FISGV-HHSVSKDI 78
AIVVL R + L + ++ SG H+
Sbjct: 79 RADAIVVLGSGRERGDPAWGADQPTGIGLERQRYAARLAKASGLPVLTSGGLHYGTPPSE 138
Query: 79 LLQKIPIRQDLAECCIDI-GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLE 137
QD + ++ T NA+ ++ V++VT +HM R
Sbjct: 139 AQLMAVSMQDDFGVTVRWKEERSRTTWENARMSAEILLPEGIKRVVVVTQAWHMSRAVWS 198
Query: 138 LQRINSTVQFIPYPI----ISHDLEENSSIFKIKILR 170
++ +P P+ + + + + K +
Sbjct: 199 FEKA--GFTVVPAPVGFLGVDNARPLGGWMPEFKSVW 233
>gi|325519750|gb|EGC99059.1| hypothetical protein B1M_38501 [Burkholderia sp. TJI49]
Length = 210
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 28/216 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEP 47
M L V +I ++ + M +PD P+ A++ VL
Sbjct: 1 MARTGRLLAVLACLWIGAAVALV--ASGMRMPDGPADLAVIFGNALDDNGAPKPVL---A 55
Query: 48 IRIERAFELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEG 105
R++ + +SG +++ ++ + + + I + NT
Sbjct: 56 ARLDVGVRCYHAGRCPTLLVSGAIDGPGLNEAAAMRDYLVARGVPAERIVVDELGDNTLA 115
Query: 106 NAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK 165
AQ A+ VLIV+ YH+ R L +R+ I +
Sbjct: 116 TAQHTLAYMRAQRLSSVLIVSQSYHLARARLAFERVG-----IARADLRAAYPRGFQWRD 170
Query: 166 IKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ E + +++L L+ F ++
Sbjct: 171 LYSSW---REVPAYAVYAVRLWLNPDARPVSFRPML 203
>gi|317506975|ref|ZP_07964744.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254733|gb|EFV14034.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 184
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 11/136 (8%)
Query: 33 DHPSVSAIVVLTGEP-IRIERAFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQD 88
A+VVL G P R L E + ++ IS G V + I +R
Sbjct: 39 PLRPADAVVVLGGAPYERFRYGIGLGERGLAPQVVISNSIGPDDPVMRQICAAPTHVR-- 96
Query: 89 LAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI-NSTVQF 147
C + + + +T G AQE A ++ +++VT H+ R ++R +Q
Sbjct: 97 -LTCFLPVPW---STRGEAQEIRRLAASRHWRSIIVVTTTAHIERARYIVRRCFAGDIQM 152
Query: 148 IPYPIISHDLEENSSI 163
YP E
Sbjct: 153 TDYPERRGAWESVYGW 168
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 27 KQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFIS-GVHHSVSKDILLQKIPI 85
+ + P AI++L G P R E E + ++++S GV + Q+ +
Sbjct: 38 STLALQQTPEPQAILMLGGNPNREEFTAEFAKKHDHLEVWVSSGVDRRT-ATEIFQQAGV 96
Query: 86 RQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI--NS 143
+ + Y+A++T N +K + HV ++T D+HM R + +
Sbjct: 97 DLG----RVHLDYRAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRAMAIASIVFGSQ 152
Query: 144 TVQFIPYPIISHDLEENS 161
+ F P PI + S
Sbjct: 153 GIAFTPVPIPTQGYPSES 170
>gi|113475490|ref|YP_721551.1| hypothetical protein Tery_1821 [Trichodesmium erythraeum IMS101]
gi|110166538|gb|ABG51078.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 191
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIG 62
W+ L + +I + + P A++VL G R A E
Sbjct: 19 ISWFLLGLLATLWIS-----YQQISGTIKPPQ----ALLVLGGAIEREAFAAEFARQH-- 67
Query: 63 EKIFI---SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
+ I SG + + + + +++ + + Y A++T N +
Sbjct: 68 PNLDIWVSSGSNP-----EYAEWLFSQAGISQTRLHLDYDAVDTVTNFTTTVDKLKSQGI 122
Query: 120 HHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
V +VT D HM R + ++ + + F P P+ S E
Sbjct: 123 TSVYLVTSDDHMRRAIVIGKIVLSSRGIAFKPLPVPSGRSPEP 165
>gi|254506071|ref|ZP_05118215.1| integral membrane protein [Vibrio parahaemolyticus 16]
gi|219550889|gb|EED27870.1| integral membrane protein [Vibrio parahaemolyticus 16]
Length = 268
Score = 61.4 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ ++ G K+ +SG +S ++ K+ + +++ I + A +T
Sbjct: 105 GLMRLAEGIRVMRIYPGSKLILSGYSGGSDISNARMMAKVALALGVSKSDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ + +++VT HM R E PYP ++ L ++
Sbjct: 165 WEEARQAAAFVK---HKKMVVVTSASHMKRALNEFHSAG----LKPYPAPTNYLAHDN 215
>gi|254254401|ref|ZP_04947718.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
gi|124899046|gb|EAY70889.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
Length = 204
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 32/211 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIV-------------VLTGEPIRIERAF 54
L +I+ ++ Y +M P+ A++ VLT R++
Sbjct: 2 LAAVACIWIVAAVALAAYGMRMR--SEPADVAVIFGSALDDDGAPKPVLT---ARLDVGV 56
Query: 55 ELLENQIGEKIFISGV--HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
+ I +SG +++ ++ + + + I + + NT AQ A
Sbjct: 57 HCYRSGRCPVILVSGGIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLA 116
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFIPYPIISHDLEENSSIFKIKILR 170
+ + VLIV+ YH+ R L +R+ + ++ YP + SS ++
Sbjct: 117 YMRAHRMSRVLIVSQYYHLARARLAFERVGIEPSNIYVAYPRAFQLRDVYSSWREVPA-- 174
Query: 171 VLLIEYLKILLLSIQLSLSTQTASQFFITLI 201
+ +++L L F ++
Sbjct: 175 --------YAVYAVRLWLDPDARPMSFRPML 197
>gi|307261514|ref|ZP_07543183.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868797|gb|EFN00605.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 246
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 7 GLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQIGEK 64
+ + + G + F + V AIVVL G R L E +
Sbjct: 15 LVVILFLNGASGTLLFA----RAQADPLAKVDAIVVL-GGEHDGREAYGVGLAEQGYADT 69
Query: 65 IFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKAL---NTEGNAQEASAWAEKNNFHH 121
+ +S +H ++ + R D+ C KA T G A A A AE +++
Sbjct: 70 VLLSNPYHGTD-AVMAEACQPRSDIEVIC-----KAPVPGTTRGEALMARALAEARDWNS 123
Query: 122 VLIVTHDYHMPRT 134
+++V+ YH+PR
Sbjct: 124 IIVVSWRYHLPRA 136
>gi|312881496|ref|ZP_07741288.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370862|gb|EFP98322.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 254
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 93 GLMRLAEGIRILRMYPGSKLILSGYAAGSDVSNARMMAKVALALGVAKPDIILLETAKDT 152
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
A++A+A+ N ++++VT +M R E PYP ++ L + +
Sbjct: 153 WEEARQAAAFV---NNKNLIVVTSASNMKRALNEFYSAG----LKPYPAPTNYLAQKN 203
>gi|293611000|ref|ZP_06693299.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826652|gb|EFF85018.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 261
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 79/198 (39%), Gaps = 23/198 (11%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFSFIKENKDTSNNIPPVKAIIVLGSGVENGQPSTILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L L+ Q + + G+ S + + + + + +A + + K+ +TE
Sbjct: 125 RLDTAAALALKQQQAQIVLTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-DLEEN 160
N + + E+++ + IVT D+H+PR + + +Q + N
Sbjct: 185 LNLKNSKPLLEQHHITLDQPIAIVTSDFHIPRAIA-IAKKQGYIQVYGVAAETPLATRYN 243
Query: 161 SSIFKI--KILRVLLIEY 176
+ + + LL EY
Sbjct: 244 AWLREYFAYASGWLLNEY 261
>gi|269792163|ref|YP_003317067.1| hypothetical protein Taci_0549 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099798|gb|ACZ18785.1| protein of unknown function DUF218 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 262
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 33 DHPSVSAIVVLTGEPIRIE-----------RAFELLENQIGEK-----IFISGVHH---- 72
P+ ++VL G +R + + +L+ + I G +
Sbjct: 76 PLPTDDGVIVLLGGGVRYDRDLKPYQLGNYTSVRVLKALQLHRDTGWPIVCCGGNPRLDP 135
Query: 73 --SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S+ L+ + + + + ++ T N A + N +V+IVT +H
Sbjct: 136 DPEASEANLMAQTLMDMGATQ--VYREGRSRTTWENLVNALPILRRLNRRNVVIVTSSFH 193
Query: 131 MPRTFLELQRINSTVQFIPY 150
MPR + + + P+
Sbjct: 194 MPRAIMTARAVLKGFDVYPH 213
>gi|59802238|ref|YP_208950.1| hypothetical protein NGO1925 [Neisseria gonorrhoeae FA 1090]
gi|161869022|ref|YP_001598188.1| periplasmic protein [Neisseria meningitidis 053442]
gi|194099817|ref|YP_002002952.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|239999990|ref|ZP_04719914.1| Periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|240013062|ref|ZP_04719975.1| Periplasmic protein [Neisseria gonorrhoeae DGI18]
gi|240017631|ref|ZP_04724171.1| Periplasmic protein [Neisseria gonorrhoeae FA6140]
gi|240081888|ref|ZP_04726431.1| Periplasmic protein [Neisseria gonorrhoeae FA19]
gi|240114167|ref|ZP_04728657.1| Periplasmic protein [Neisseria gonorrhoeae MS11]
gi|240116805|ref|ZP_04730867.1| Periplasmic protein [Neisseria gonorrhoeae PID18]
gi|240119033|ref|ZP_04733095.1| Periplasmic protein [Neisseria gonorrhoeae PID1]
gi|240122252|ref|ZP_04735214.1| Periplasmic protein [Neisseria gonorrhoeae PID24-1]
gi|240122429|ref|ZP_04735385.1| Periplasmic protein [Neisseria gonorrhoeae PID332]
gi|240126722|ref|ZP_04739608.1| Periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|240127142|ref|ZP_04739803.1| Periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493442|ref|ZP_05106613.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|260441598|ref|ZP_05795414.1| Periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|268595796|ref|ZP_06129963.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268597985|ref|ZP_06132152.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268600240|ref|ZP_06134407.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268602480|ref|ZP_06136647.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268604748|ref|ZP_06138915.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268681017|ref|ZP_06147879.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268685301|ref|ZP_06152163.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268685499|ref|ZP_06152361.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044968|ref|ZP_06570677.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|293398039|ref|ZP_06642245.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296313265|ref|ZP_06863206.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|59719133|gb|AAW90538.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|161594575|gb|ABX72235.1| periplasmic protein [Neisseria meningitidis 053442]
gi|193935107|gb|ACF30931.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|226512482|gb|EEH61827.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268549185|gb|EEZ44603.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268551773|gb|EEZ46792.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268584371|gb|EEZ49047.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268586611|gb|EEZ51287.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268588879|gb|EEZ53555.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268621301|gb|EEZ53701.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268625585|gb|EEZ57985.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268625783|gb|EEZ58183.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011862|gb|EFE03858.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|291611985|gb|EFF41054.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296840237|gb|EFH24175.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|317165286|gb|ADV08827.1| hypothetical protein NGTW08_1872 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 218
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVC----LIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F L+ + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|46143765|ref|ZP_00134210.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208505|ref|YP_001053730.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae L20]
gi|303251036|ref|ZP_07337222.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307245941|ref|ZP_07528024.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307250279|ref|ZP_07532233.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252669|ref|ZP_07534561.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|126097297|gb|ABN74125.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650046|gb|EFL80216.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853160|gb|EFM85382.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306857720|gb|EFM89822.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859845|gb|EFM91866.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 246
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|262368832|ref|ZP_06062161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316510|gb|EEY97548.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 259
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 21/194 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRIE 51
R+ W +F +F ++ F F+ + Q + P H + AIVVL R++
Sbjct: 68 RWAW-AIFFVWVFSLVIFFVFLGFSNQQNTP-HVAAPAIVVLGSGLKHGKPSPTLASRLD 125
Query: 52 RAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIR-QDLAECCIDIGYKALNTEGNA 107
+A + + +SG S+ +++ I + I ++ +TE N
Sbjct: 126 QAANYAKLHPNSIVVVSGGLSFQQKNSEAEAMRQYLIDVHHIPAQRIYTEDQSTSTELNL 185
Query: 108 QEASAWAEKNNF---HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIF 164
+ K + + IVT D+H+PR+ R + N+ +
Sbjct: 186 INSKKILAKQHISLQQPIAIVTSDFHIPRSRAIAIRQGYQTPIMISAQTPLATRYNAWLR 245
Query: 165 KIKILRV--LLIEY 176
+ LL EY
Sbjct: 246 EYFAYWSGWLLNEY 259
>gi|306844040|ref|ZP_07476635.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
gi|306275795|gb|EFM57519.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
Length = 264
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I+VL G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIVLGGYMNGEIGAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKIIVSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|167757031|ref|ZP_02429158.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|237735899|ref|ZP_04566380.1| membrane associated protein [Mollicutes bacterium D7]
gi|167703206|gb|EDS17785.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|229381644|gb|EEO31735.1| membrane associated protein [Coprobacillus sp. D7]
Length = 190
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 47 PIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTE 104
R+E L + + + +SG V + + ++ I + + I I ++ +T
Sbjct: 54 KSRVEMGVTLYKKDKIKFLILSGGAVKNEYQEAKIMASYAISLGVKKEDILIEGQSRSTY 113
Query: 105 GNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
N + + N + L+VT+ +H+ +
Sbjct: 114 HNLMYSRDIMQINGLKNALVVTNSWHLRKA 143
>gi|171910674|ref|ZP_02926144.1| hypothetical protein VspiD_05860 [Verrucomicrobium spinosum DSM
4136]
Length = 211
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 32/209 (15%)
Query: 2 RYFWYGL-FVCLIFFIMGFIS-----FIRYVKQMHIPDHP--SVSAIVVLTGEPI-RIER 52
R + + + ++ ++G +R + + D P AIVVL G R
Sbjct: 7 RLAFRLVKLILVVAVLLGVAWIFRESLLRTAARTWVVDDPVLKADAIVVLGGGRDWRPFT 66
Query: 53 AFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCID-----------IGYKAL 101
A ++ + ++ S L + P ++ + +G
Sbjct: 67 AADMYLAGQSTVVLVT--QPEKSPSQNLLQQPSEAEINTTVLTKKGVPSTAIRPLGQNVT 124
Query: 102 NTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST------VQFIPYPIISH 155
+T A W + +LI T +H R QR V+ IP+P S
Sbjct: 125 STRDEALALRDWVIAHQAKDILIPTDPFHTRRARWIFQRALEGTGATVHVRAIPHPRYS- 183
Query: 156 DLEENSSIFKIKILRVLLIEYLKILLLSI 184
E E K L +
Sbjct: 184 ---ETDWWRHEDGFIAFQTELAKSLYYLL 209
>gi|119512189|ref|ZP_01631279.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
gi|119463155|gb|EAW44102.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
Length = 175
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 9/151 (5%)
Query: 28 QMHIPDHPSVSAIVVLTGEPIRIER---AFELLENQIGEKIFISGVHHSVSKDILLQKIP 84
Q + A++VL G +ER I+ISG + + K
Sbjct: 14 QESKIEELPPQAVLVLGGSTSHLEREKFTANFARQHPSLPIWISGGSPPTFTEKVFAKAG 73
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRIN 142
+ + Y+A++T N + V ++T ++HM R + E+ +
Sbjct: 74 VDPKRLR----LDYEAVDTVTNFTTLVDELQAQGIKSVYLITSEFHMRRARVIGEIVLGS 129
Query: 143 STVQFIPYPIISHDLEENSSIFKIKILRVLL 173
+Q P + S ++ E R L+
Sbjct: 130 RGIQLKPVAVPSENMREPVDKSIRDGARALI 160
>gi|319783692|ref|YP_004143168.1| hypothetical protein Mesci_4004 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169580|gb|ADV13118.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 263
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 65/222 (29%), Gaps = 47/222 (21%)
Query: 8 LFVCLIFFIMGFISFIRYVKQM--HIPDHPSVSAIVVLTGEPIRIERAFELLENQI---- 61
L + L + + +++ P V IVVL G E A L
Sbjct: 47 LILALSAWTSLGAMMLNPLEERFQRPPLPEKVDGIVVLGGGF---EGAINLARGGYELNS 103
Query: 62 -----------GEK--------------IFISGVHHSVSKDILLQKIPIRQDLAECCIDI 96
+ +F+ G + + LL + + D +
Sbjct: 104 SGDRMVETAILARRFPTAKVVVSGGTGALFLDGEGDAATAPRLLTALGVAADRM----IL 159
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII--- 153
K+ NT NA L+VT +HMPR + +P+P+
Sbjct: 160 ENKSRNTYENAVFTKELVTPKPGETWLLVTSAFHMPRAKALFDKA--GFATVPWPVDYRT 217
Query: 154 ----SHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQ 191
L ++ ++ + + E++ + + +
Sbjct: 218 SGREGVGLFRDNPADSLQATTMAIREWIGLFAYWLSGRIDQP 259
>gi|17547179|ref|NP_520581.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17429481|emb|CAD16167.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 185
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 36 SVSAIVVLTGEPI-RIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCI 94
IVVL GE R+ A EL + ++F+SG ++++++ + AE
Sbjct: 39 RADVIVVLGGESGQRVIGAAELYHAGVAPRVFVSG---EGDCLLIVRRLEMAGVPAER-- 93
Query: 95 DIGYK--ALNTEGNAQEASA-WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
IG++ + +T NA+ A + ++VT YH R +R+ V +
Sbjct: 94 -IGHECESGSTMENARMTRRTLAGQPPVRSAVLVTSWYHTGRALHVFRRVWPEVAWGARG 152
Query: 152 IISHDLEENSSIFKIKILRVLLIEYLKILLLSIQ 185
+ D S +L EY+K +++
Sbjct: 153 VFPGDTLAKSFPIYESGS--ILAEYIKRAWYAVR 184
>gi|330984301|gb|EGH82404.1| hypothetical protein PLA107_04649 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 244
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 41 VVLTGEPIRIERAFELLENQI---GEKIFISGV---HHSVSKDILL--QKIPIRQDLAEC 92
VV T R+ +A E+ + + ISG ++++ + + + DL
Sbjct: 80 VVPTYALPRLLKAIEVYRDCQTVSQCTLLISGGPTGETTLTEAEVYQDRILHSAPDL-AG 138
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN-STVQFIPYP 151
I++ K+ NT NA+ +S+WA+ + + +VT HM R+ + T
Sbjct: 139 HIELEAKSRNTWENARFSSSWAKAHGYGQARLVTSLLHMRRSQSYFAHFDFPTSPEYSEQ 198
Query: 152 IISHDLEENSSIFKIKILRVLLIE 175
++ S+ + ++ VL+ E
Sbjct: 199 VVGPTSWLPSAW-NLAMVEVLIHE 221
>gi|302185148|ref|ZP_07261821.1| hypothetical protein Psyrps6_02354 [Pseudomonas syringae pv.
syringae 642]
Length = 256
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVVVEFAARKLEQIPPLPQQQWATLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|190150356|ref|YP_001968881.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307254915|ref|ZP_07536737.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259356|ref|ZP_07541083.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263699|ref|ZP_07545307.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915487|gb|ACE61739.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306862156|gb|EFM94128.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866592|gb|EFM98453.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870953|gb|EFN02689.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|315646581|ref|ZP_07899699.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
gi|315278224|gb|EFU41544.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
Length = 217
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 45 GEPIRIERAFELLENQIGEKIFISGV----HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
G R+E+A + +SG ++ ++ ++ + + E I + +A
Sbjct: 74 GLRERLEQALVEYNAGRFDTFIVSGGLDKPGYTYTEAEGMRNFLVEAGVPEERIYLENEA 133
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF---LELQRINSTVQFIP---YPIIS 154
+T N + E N + +I+THDYH R+ L + ++ P++
Sbjct: 134 TSTYENLLYSQDIMENNGWKTAIIITHDYHGTRSMEVATTLGYDHPSMSLTESTVLPMVK 193
Query: 155 HDLEENSSIFKIKILRVLL 173
H E + K R+L+
Sbjct: 194 HKSREVLAYTKWTADRLLI 212
>gi|266620475|ref|ZP_06113410.1| putative SanA protein [Clostridium hathewayi DSM 13479]
gi|288867927|gb|EFD00226.1| putative SanA protein [Clostridium hathewayi DSM 13479]
Length = 249
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 20/133 (15%)
Query: 37 VSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKI 83
I+VL R+ R EL E EK+ +SG H + D + +++
Sbjct: 76 ADCILVLGAGVHPDGKPSNMLEDRLLRGIELYEAGASEKLLMSGDHGRKNYDEVNAMKQF 135
Query: 84 PIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
+ + + + + + +T + A E ++IVT YH+ R
Sbjct: 136 AVDRGVPSEDVFMDHAGFSTYESMYRARDVFEAEK---IIIVTQQYHLYRAL----YAAK 188
Query: 144 TVQFIPYPIISHD 156
+ Y + S
Sbjct: 189 QLGLDAYGVASDQ 201
>gi|303253664|ref|ZP_07339802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248075|ref|ZP_07530104.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302647584|gb|EFL77802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855473|gb|EFM87647.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 246
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 28/136 (20%)
Query: 27 KQMHIPDHPSVSAIVVLTGE-------PIRIERA---------FELLENQIGEKIFISGV 70
+ + D+ AIVVL G I L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGS 127
Query: 71 HHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLI 124
+ + + + KA T+ NAQ + K + +++
Sbjct: 128 SPNGTSEAKTMANEFQYFFSVSTQW------LEEKAKTTKENAQFSRELLAKEGINKIIL 181
Query: 125 VTHDYHMPRTFLELQR 140
VT+ +HM R + ++
Sbjct: 182 VTNQWHMKRAKMLFEK 197
>gi|148240589|ref|YP_001225976.1| hypothetical protein SynWH7803_2253 [Synechococcus sp. WH 7803]
gi|147849128|emb|CAK24679.1| Uncharacterized conserved secreted protein [Synechococcus sp. WH
7803]
Length = 195
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 55/147 (37%), Gaps = 9/147 (6%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVSA--IVVLTGEPIRIERAFELLENQIGEKIFI 67
L+ ++G + ++ I+VL G+ R L ++ + +
Sbjct: 8 FLLVSALIGGAAMATPLRPFAKAALTRQDPQRILVLGGDAERERIGLRL-ARRLALPLVV 66
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + + + + L + + Y+A +T GN + HVL+VT
Sbjct: 67 SGG----TNPEYARWLMEHEGLGTNEVRLDYRAQDTLGNFTSLVDELQAEGVEHVLLVTS 122
Query: 128 DYHMPRTFLE--LQRINSTVQFIPYPI 152
+ H+PR L + + ++ P+
Sbjct: 123 EDHLPRALLVGGVVAGSRGIRLTGVPV 149
>gi|253577135|ref|ZP_04854456.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843517|gb|EES71544.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 76/211 (36%), Gaps = 34/211 (16%)
Query: 2 RYFWYGLFVCL--IFFIMGFISFIRYVKQMHIPDHPSVS----AIV---VLTGE------ 46
R F +GL V I +++ ++ I +++ + IV L G+
Sbjct: 26 RIFRWGLVVISLGIGWMLYVLAQIGSIERNPAANSDLSDPAEVGIVLGAALWGDEPSPGL 85
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVS----KDILLQKIPIRQDLAECCIDIGYKALN 102
R++++ + + + ++G + + + + + + + + KA +
Sbjct: 86 RERLDQSLKDYKAGKFQWFLLTGGLDTATSQYTEAEGMANYLEQHGVPREKMLLENKATS 145
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN----STVQFIPYPIISHDLE 158
T N + + ++ F VLIVTH +H R E+ + + ++
Sbjct: 146 TYENLKFSQEILKERGFTSVLIVTHTFHGNRA-YEIAQALNYEQPRLSLTSSKVLKPL-- 202
Query: 159 ENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
R +L Y K L + L++
Sbjct: 203 -------PNTFREILA-YTKWKLDQLGLAIG 225
>gi|84388504|ref|ZP_00991051.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
gi|84377053|gb|EAP93924.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
Length = 284
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNARMMAKVALALGVAKPDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 165 WEEARQAAAFVKN---KRMVLVTSASHMTRALNEFHAAGMKPLPAPTNYLAQEGIVEPWN 221
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEIT 205
+ ++ E + ++ S++ L T + ++ E +
Sbjct: 222 KYMPKALYLEQTERYWHETMGLMWQSLRDWLDTSNDTVEEPIVVPETS 269
>gi|332710355|ref|ZP_08430303.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
gi|332350904|gb|EGJ30496.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
Length = 208
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQ 60
+R V ++ + FI + + P+ I+ L G+ R + E +
Sbjct: 24 LRKMRVVFTVTILLIALSFIPIRLGLAHLQ---SPTPEVILTLGGDITREKFTAEFAQQH 80
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
I++S + + ++ I + + I +A++T N + ++ H
Sbjct: 81 PNLDIWVSSGQPTPQAQKVFREAGIP----DQQVHIDRRAIDTVTNFTSLVQDFQTHDIH 136
Query: 121 HVLIVTHDYHMPRT--FLELQRINSTVQFIPYPIISHDLEENSSIF 164
HV ++T D+HM R+ + + F P I S E S +
Sbjct: 137 HVYLITSDFHMRRSIAIAFFVFGSHGIAFTPVAIPSQR-PEESWLR 181
>gi|170288947|ref|YP_001739185.1| hypothetical protein TRQ2_1158 [Thermotoga sp. RQ2]
gi|170176450|gb|ACB09502.1| protein of unknown function DUF218 [Thermotoga sp. RQ2]
Length = 237
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L V F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAVTAYLFSSYVGEFLFLWSLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGVH----------------HSVSKDI-LLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + + +++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRPEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R + +V P
Sbjct: 151 RNTYENAFFTRE---KIGDVPIILVTDSIHMRRAVFTFKSFFQSVTPYP 196
>gi|149914159|ref|ZP_01902690.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
gi|149811678|gb|EDM71511.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
Length = 260
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 17/131 (12%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ A +V G R+ AF G ++ ++ + Q
Sbjct: 108 AERLTATLELARRFPDAKIVYAGGSGRVRDAF-------GAQL---------TEADIAQH 151
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
+ LA + + NT NA A A ++VT +HMPR +
Sbjct: 152 FLLNMGLAPERLLTDPTSRNTAENAARAMELATPEVGQTWVLVTSAFHMPRAIRSFEAAG 211
Query: 143 STVQFIPYPII 153
+ + +PYP+
Sbjct: 212 WS-ELVPYPVD 221
>gi|66047577|ref|YP_237418.1| hypothetical protein Psyr_4350 [Pseudomonas syringae pv. syringae
B728a]
gi|63258284|gb|AAY39380.1| Protein of unknown function DUF218 [Pseudomonas syringae pv.
syringae B728a]
Length = 256
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 41/189 (21%)
Query: 1 MRYFWYGLFVCLIFFIMGFIS----------FIRYVKQMHIPDHPS-------VSAIVVL 43
+R L +G + R ++Q+ AIVVL
Sbjct: 27 LRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQIPPLPQQRWAMLAQQADAIVVL 86
Query: 44 TGEPIR--------IERAFEL--------LENQIGEKIFISGV-HHSVSKDILLQKIPIR 86
R L L + G I SG H
Sbjct: 87 GNGRERNSPTWGTDTPTGLGLERLRLAARLAKESGLPILTSGGLHFDQPPSEAAIMAQSL 146
Query: 87 QDLAECCIDIGYK---ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINS 143
QD + + ++ + T NA ++A + V++VT +HMPR ++
Sbjct: 147 QDDFA--VTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQA-- 202
Query: 144 TVQFIPYPI 152
+ P+
Sbjct: 203 GFTVVGAPV 211
>gi|228921749|ref|ZP_04085066.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953412|ref|ZP_04115458.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070559|ref|ZP_04203799.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|229080263|ref|ZP_04212790.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|229179370|ref|ZP_04306724.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|229191184|ref|ZP_04318173.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228592334|gb|EEK50164.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228604268|gb|EEK61735.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|228703158|gb|EEL55617.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|228712574|gb|EEL64509.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|228806309|gb|EEM52882.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837961|gb|EEM83285.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|206969158|ref|ZP_03230113.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736199|gb|EDZ53357.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 210
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|126654814|ref|ZP_01726348.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
gi|126623549|gb|EAZ94253.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
Length = 198
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 52/161 (32%), Gaps = 14/161 (8%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQI 61
+ F+ L + + +G+ Y Q AI VL G R A +L
Sbjct: 22 KRFFPLLCLATLGLWLGYKQLQSYFAQPE--------AIFVLGGHEDRERFAAKLALEHP 73
Query: 62 GEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHH 121
I++S + I D + Y+A +T N +
Sbjct: 74 NLPIWVSSGSPENYVTKIFTNAGISGDRLH----LDYQAKDTVTNFTTLVKELKDQGIDS 129
Query: 122 VLIVTHDYHMPRTFL--ELQRINSTVQFIPYPIISHDLEEN 160
V ++T D HM R + E+ + P + S D E
Sbjct: 130 VYLITSDNHMNRARIIGEIVFGTQGITLKPLSVPSDDSPEP 170
>gi|59713611|ref|YP_206386.1| inner membrane protein [Vibrio fischeri ES114]
gi|197337496|ref|YP_002158026.1| integral membrane protein [Vibrio fischeri MJ11]
gi|59481859|gb|AAW87498.1| conserved inner membrane protein [Vibrio fischeri ES114]
gi|197314748|gb|ACH64197.1| integral membrane protein [Vibrio fischeri MJ11]
Length = 287
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 49 RIERAFELLENQIGEKIFISGVH--HSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG + +VS ++ ++ + + + I + A +T
Sbjct: 108 RLTEGIRIYRMYPGSKMILSGYNGGTTVSHARMMARVALSLGVQKSDILLLESARDTHEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A + K +++VT HMPR E ++ P ++H +
Sbjct: 168 AIQTFNSVGK---STLVLVTSASHMPRAMSEFHQLGMDPVPAPTNYLAHSEVKQPWDKYA 224
Query: 167 KILRVL 172
+ L
Sbjct: 225 PKAKYL 230
>gi|323704444|ref|ZP_08116023.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536510|gb|EGB26282.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 194
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 23/148 (15%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHI------PDHPSVSAIVVLTGE------------PIR 49
L + + ++ F+ + + ++ + AI++L R
Sbjct: 3 LLIKITASLITFVVLLNIIAELQVIIFAYNAKPVKSDAIIIL--GCAVYGKNPSPFFKER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L + +G+ I +SG VS+ ++ ++ + I K+ +T N
Sbjct: 61 LNEAIRLYKKGLGKYIIVSGGKGPGEDVSEAEAGKEYLLKNGIPYNTILKDDKSYSTLQN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + ++ + +IV++ +H+ R
Sbjct: 121 LENSKKIMDEKSLKTAIIVSNKFHLKRA 148
>gi|319936939|ref|ZP_08011349.1| exported protein [Coprobacillus sp. 29_1]
gi|319807875|gb|EFW04454.1| exported protein [Coprobacillus sp. 29_1]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 37 VSAIVVLTGE----------PIRIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIP 84
I+VL R+E A +L ++ KI +SG H + +++
Sbjct: 44 ADCILVLGAGVRNNKPTPMLNDRLEVAIQLYKDGKASKIIMSGDHGQEDYNEVGIMKTFA 103
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
I + I + + +T + A + V+IVT DYH+ R
Sbjct: 104 IENGVPSSAIFMDHAGFSTYESLYRAKEIFKAKK---VIIVTQDYHLYRALY 152
>gi|148652828|ref|YP_001279921.1| hypothetical protein PsycPRwf_1021 [Psychrobacter sp. PRwf-1]
gi|148571912|gb|ABQ93971.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 267
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 40/208 (19%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHP--SVSAIVVLTGE----------PI 48
R W L+ + +++ FI F + K + D P +V+AI+VL G
Sbjct: 71 RMVWKLLWAIFVLWLISFIVFAFSLHKNIKQVDQPYETVAAIIVLGGGIQDGLPTPTLAS 130
Query: 49 RIERAFELLENQIGEKIFISGV--------HHSVSKDILLQKIPIRQDLAECCIDIGYKA 100
R++ A L++ Q + SG L I + + +
Sbjct: 131 RLDAAAPLIKEQPQAVVITSGGIGMGEIRSEGEAMARYLYALYGIPLEHIQQ----EKNS 186
Query: 101 LNTEGNAQEASAWAEKNNF---HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH-D 156
+TE N + + + +VT D+H+PR+ + + +
Sbjct: 187 TSTEENFLFSQQILTEQGISLNDPIAVVTSDFHIPRSLAIAEHQG-YTNLVALASTTPLS 245
Query: 157 LEENSSIFKIKILRVLLIEYLKILLLSI 184
+ NS EY + +
Sbjct: 246 IRYNSW----------FREYFAYISGWL 263
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 12 LIFFIMGFISFIRYVKQMHIP----DHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFI 67
+ + GFI + + + + P AI+ L G P R E E + I++
Sbjct: 1 MFLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGGSPEREEFTAEFAKKHPHLDIWV 60
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
S + Q I + Y A++T N + N+ H+ ++T
Sbjct: 61 SSGIPPKQAQAIFQNANISNHRLH----LDYLAVDTVTNFTSLVDDFKHNHIQHIYLITS 116
Query: 128 DYHMPR--TFLELQRINSTVQFIPYPIISHDLEEN 160
YH+PR L + + F P PI S E+
Sbjct: 117 AYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRES 151
>gi|229173740|ref|ZP_04301282.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
gi|228609839|gb|EEK67119.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
Length = 219
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTNDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|160902984|ref|YP_001568565.1| hypothetical protein Pmob_1541 [Petrotoga mobilis SJ95]
gi|160360628|gb|ABX32242.1| protein of unknown function DUF218 [Petrotoga mobilis SJ95]
Length = 214
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 40/209 (19%)
Query: 10 VCLIFFIMGFISFI----RYVKQMHIP-------DHPSVSAIVVLTGE------------ 46
VC++ +I F ++ + P D IVVL G
Sbjct: 2 VCIVIYIFSSGWFAKIIVLPLENRYPPVNVSQLDDTQEKGVIVVLGGGIIPETPREGSGE 61
Query: 47 -----PIRIERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGY 98
R+ F LL + I ++G + + ++++ ++ + I +
Sbjct: 62 LSDSAMKRVYEGF-LLYKNLQIPIVVTGGKLLGTEIPEAQIMKEELLKMGVKPNDIYVEP 120
Query: 99 KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLE 158
A NT+ NA+ E + + ++T H+PR + + +P P
Sbjct: 121 LAKNTKQNAEFTLTLLESDEVQKIYLITSAIHLPRAMNYFKSYT-NIDVVPVPTDYKISR 179
Query: 159 EN-SSIFKIKILRVL------LIEYLKIL 180
E + +R L EYL ++
Sbjct: 180 EELKWYDFLPDMRFLEATSSAWHEYLGLV 208
>gi|288921304|ref|ZP_06415586.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288347278|gb|EFC81573.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 225
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 12/154 (7%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPDHPSV-SAIVVLTGEPIRIERAFELLENQIGEKIFI 67
V L + F+ + + D P+ AIV+ G P R E+A L + +
Sbjct: 62 IVTLGVASLLFLGATVRLFVLPRRDDPAPVDAIVMFAGSPGRFEQAVSLARAGYAPTLAV 121
Query: 68 SGVHHSVSKDILLQKIPIRQDLAEC-CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S + + P + I L T+G ++ + A + + +++VT
Sbjct: 122 S---------VPTAEDPCPPPIPNVEVICFAPDPLTTQGESRWTADAAARYGWQSIIVVT 172
Query: 127 HDYHMPRTFLELQRINSTVQFIPYPIISHDLEEN 160
+ R L L+R S + P+ L
Sbjct: 173 STTQVTRARLRLERCYSGQILMS-PVPPPRLMWP 205
>gi|256061258|ref|ZP_05451408.1| hypothetical protein Bneo5_12948 [Brucella neotomae 5K33]
gi|261325265|ref|ZP_05964462.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301245|gb|EEY04742.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 264
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 51/170 (30%), Gaps = 27/170 (15%)
Query: 9 FVCLIFFIMGFISFIRYVKQMHIPD---HPSVSAIVVLTG-----------------EPI 48
+ F G + ++ V I++L G
Sbjct: 48 LLFFGAFTTGGAMLLSPLENRFPKSESLPQHVDGIIMLGGYMNGEIVAGRQNFELNSAAD 107
Query: 49 RIERAFELLENQIGEKIFISGVH-----HSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
RI L KI +SG S + + + + + K+ NT
Sbjct: 108 RIVETMRLARLYPDAKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNT 167
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPII 153
NA + A A+ L+VT YHMPR ++ V +P+
Sbjct: 168 VENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVT--AWPVD 215
>gi|301061545|ref|ZP_07202307.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300444353|gb|EFK08356.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 183
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 34/182 (18%)
Query: 36 SVSAIVVL-TG--EPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAEC 92
A+VVL TG R+ A L K I+G K+ L+ Q C
Sbjct: 8 PSDAVVVLYTGVEYYPRLMEAASLYVKGSVGKAVING----NRKNDALR-WIETQGFKRC 62
Query: 93 C--------------------IDIGYK-ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHM 131
C + IG + A +T AQ + + +++ T +H
Sbjct: 63 CPWYEDKFRILGVLGVPREDIVHIGAEDAYDTVSEAQIVGDALIRKGYRTIILTTSKFHT 122
Query: 132 PRTFLELQRINST---VQFIPYPIISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSL 188
R + + VQ + P + + + +R +L EY + + L
Sbjct: 123 RRAAFIWKNMYKDRLSVQIV--PARTDPYDPAGWWKHGRQIRWVLAEYGAWVYYWWKHML 180
Query: 189 ST 190
+
Sbjct: 181 GS 182
>gi|187777765|ref|ZP_02994238.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
gi|187774693|gb|EDU38495.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
Length = 242
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 61/160 (38%), Gaps = 26/160 (16%)
Query: 15 FIMGFISFIRYVKQ----MHIPDHPSVSAIVVLTGE------------PIRIERAFELLE 58
+ FI F + ++ D P AI+VL G R+ +L +
Sbjct: 41 AAIFFIDFRVRSESKKYIVNPKDVPEAEAILVL-GAYVKPNGKLCDMLEDRVAVGIDLYK 99
Query: 59 NQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
N +K+ SG H V+ D + ++K+ ++ + + I + + +T + A +
Sbjct: 100 NNKAKKLLFSGDHGQVNYDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA 159
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD 156
++IVT YH+ R I + Y + S
Sbjct: 160 KK---IIIVTQQYHLMRAV----YIARQLGLDAYGVNSDQ 192
>gi|217969248|ref|YP_002354482.1| hypothetical protein Tmz1t_0817 [Thauera sp. MZ1T]
gi|217506575|gb|ACK53586.1| protein of unknown function DUF218 [Thauera sp. MZ1T]
Length = 259
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 35/179 (19%)
Query: 1 MRYFWYGLFVCLIFFI---MGFISF-IRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+ + W G+ + L+ +G++ + Y + + AIVVL
Sbjct: 45 LAFAWAGVALNLLLIFPPSVGWLVARVEYPQMLDRARAREAQAIVVLGAGKRTHAPEFGG 104
Query: 48 --------IRIERAFELLENQIGEKIFISGVHHSVSKDI-------LLQKIPIRQDLAEC 92
R+ A L + +SG + L + + E
Sbjct: 105 ETVNRLALERLRYAAALARETRLP-VLVSGGAPAGDTPEAYLMEALLRDEYGVPPRWVE- 162
Query: 93 CIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ +T NA+ ++ + +L+VTH HM R E + V P
Sbjct: 163 -----SASRDTRENARFSAVHLQAAGVKRILLVTHAMHMERARPEFEAAGLDVIPAPTA 216
>gi|194334031|ref|YP_002015891.1| hypothetical protein Paes_1216 [Prosthecochloris aestuarii DSM 271]
gi|194311849|gb|ACF46244.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 196
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 11/190 (5%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-RIERAFELLEN 59
+ F+ + F+ + Y+ I+VL G+ R+ + EL
Sbjct: 9 LALLATSAFLTAMIFLG-----LGYIVSWPAASPEKADVIIVLGGDDGLRVSKGAELYHA 63
Query: 60 QIGEKIFISGVHHS-VSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+ + ++G+ L ++ I + I + + +T A + K
Sbjct: 64 GFADDLLLTGLDSRYYRPGKLNWRERKLISLGIPGEAIHVDIVSTSTWEEAANTLSAMNK 123
Query: 117 NNFHHVLIVTHDYHMPRTFLELQRI--NSTVQFIPYPIISHDLEENSSIFKIKILRVLLI 174
N + L+++ HM R ++ S+ +F+ R +L
Sbjct: 124 NGWQRALVISDPPHMLRLQHTWTKVFTGSSKRFVLIATKPEWWHPLLWWNNETGSRFVLS 183
Query: 175 EYLKILLLSI 184
E K L ++
Sbjct: 184 EIKKNLYYAV 193
>gi|169628110|ref|YP_001701759.1| hypothetical protein MAB_1015c [Mycobacterium abscessus ATCC 19977]
gi|169240077|emb|CAM61105.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 204
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYV-KQMHIPDHPSVSAIVVLTGEP-IRIERAFELLEN 59
R + + + + GFI+ V AIVVL G P R + +L +
Sbjct: 27 RRRILLVCITVTVLLAGFITAGWRVYMNPQTDPLRPADAIVVLGGTPYERFDVGLDLAKR 86
Query: 60 QIGEKIFISGVHHSVSKDILLQKIPIRQDLA----ECCIDIGYKALNTEGNAQEASAWAE 115
+ IS + + C I + TEG AQE + A+
Sbjct: 87 GYAPYLLIS----QSTGADDRNMDKYCKGHFTFTVSCFIPDPW---TTEGEAQEIRSKAQ 139
Query: 116 KNNFHHVLIVTHDYHMPRT 134
+ +HH++++T H+ R
Sbjct: 140 ELGWHHIIVITFTPHVSRA 158
>gi|167570139|ref|ZP_02363013.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 240
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 12/134 (8%)
Query: 38 SAIVVLTGEP-IRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDL 89
+ T + RI++ EL + + + +SG +++ + + + +
Sbjct: 79 DGVAAPTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEADTYARYLLARGV 138
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
A + ++ T NA+ +A ++ +++VT Y M R L+ R P
Sbjct: 139 ANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLDFARFG----IAP 194
Query: 150 YPIISHDLEENSSI 163
P+ ++
Sbjct: 195 QPVYANRRVAQLGW 208
>gi|209551623|ref|YP_002283540.1| hypothetical protein Rleg2_4052 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537379|gb|ACI57314.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 262
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 26/145 (17%)
Query: 30 HIPDHPSVSAIVVLTGE-----------------PIRIERAFELLENQIGEKIFISGVHH 72
D S+ ++VL G R A L + +I +SG
Sbjct: 71 PAADPDSLQCMIVLGGGFENEVNTARHGIEFNAAADRFVEALRLAQKFPQSRILVSGGDG 130
Query: 73 SVS------KDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVT 126
S+S + P+ + I+ ++ T NA + + L++T
Sbjct: 131 SLSGIYEGDAAASERFFPLFGVGKDRLIE-ERQSRTTFENAVNTKEFLASQGLANCLLIT 189
Query: 127 HDYHMPRTFLELQRINSTVQFIPYP 151
+HMPR+ +++ + +P+P
Sbjct: 190 SGFHMPRSVGIFRKL--GIDIVPWP 212
>gi|312622108|ref|YP_004023721.1| hypothetical protein Calkro_1031 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202575|gb|ADQ45902.1| protein of unknown function DUF218 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 195
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPS-VSAIVVLT----GE------PIR 49
MR F L L+ I+ F + I P I+VL G+ R
Sbjct: 1 MRRFLKILLCTLVIVILIFAVTEASIIIFGISAKPKKSDCIIVLGCAVYGDFPSPFFRER 60
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ RAFEL + I + G ++S+ ++ + + + K+ +T N
Sbjct: 61 LNRAFELYKKGYARYIVVCGAKGPGENISEAEAGKRYLVEMGVLPKFVLKEDKSFSTYEN 120
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
A K F +IV++ +H+ R
Sbjct: 121 LLHAKRVMNKKGFKSAIIVSNMFHLERA 148
>gi|218898164|ref|YP_002446575.1| hypothetical protein BCG9842_B2141 [Bacillus cereus G9842]
gi|218541554|gb|ACK93948.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 135 QVGIENGIHTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|75764443|ref|ZP_00743940.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901618|ref|ZP_04065796.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
gi|228908852|ref|ZP_04072684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|74488069|gb|EAO51788.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228850862|gb|EEM95684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|228858030|gb|EEN02512.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
Length = 219
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 84 SLYRNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N H IV+ HM R RI + Y +
Sbjct: 144 QVGIENGIHTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|104783752|ref|YP_610250.1| hypothetical protein PSEEN4811 [Pseudomonas entomophila L48]
gi|95112739|emb|CAK17467.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 253
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 21/137 (15%)
Query: 35 PSVSAIVVLTGEPIRIERA---------FEL--------LENQIGEKIFISGV-HHSVSK 76
AIVVL R + A L L G + SG H+
Sbjct: 78 TKADAIVVLGAGRERGDPAWGGSDQPTYVALERMRFAAQLAKASGLPVLTSGGLHYGTPP 137
Query: 77 DILLQKIPIRQDLAECCIDIGYKA-LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
+ + +A T NA + + V++VT +HM R+
Sbjct: 138 SEAQLMADRLEADFGVRVTWKEEASRTTWENADFTAKLLQPLGIRRVVVVTQAWHMQRSR 197
Query: 136 LELQRINSTVQFIPYPI 152
+R + +P P+
Sbjct: 198 WSFERA--GFEVVPAPV 212
>gi|307245325|ref|ZP_07527413.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254278|ref|ZP_07536118.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258738|ref|ZP_07540470.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853666|gb|EFM85883.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862757|gb|EFM94711.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867089|gb|EFM98945.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 252
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYTIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++ +
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|229030771|ref|ZP_04186797.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
gi|228730533|gb|EEL81487.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
Length = 219
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKTNDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 83
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + + I I K+L TE N + A
Sbjct: 84 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKDEDILIETKSLFTEENLKNAK 143
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 144 EVGIENGIRTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|283458819|ref|YP_003363461.1| hypothetical protein RMDY18_18090 [Rothia mucilaginosa DY-18]
gi|283134876|dbj|BAI65641.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18]
Length = 385
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 22/152 (14%)
Query: 3 YFWYGLFVC-LIFFIMGF-ISFIRYVKQMHIPDHPSVSAIVVLTGE----------PIRI 50
YF++ L + + +GF ++ + +VVL RI
Sbjct: 165 YFYFSLVLTYFTIYAVGFTVAAALNLVNFR----QQADYVVVLGSGLIGDQVTPLLAGRI 220
Query: 51 ERAFELLENQIGEKIFIS---GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNA 107
+R E+ G K+ +S G V + + + + + + + E I + +A+NT N
Sbjct: 221 DRGIEIYRKNPGSKLIMSGGQGADEEVPEGVAMTRYAVSRGIPEADIIVEDRAVNTRENL 280
Query: 108 QEASAW---AEKNNFHHVLIVTHDYHMPRTFL 136
+ A + V +VT YH+ R L
Sbjct: 281 LFSYALMPEVAEGKTPKVAVVTTSYHLFRALL 312
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ ++ G K+ +SG +S +L K+ + +A+ I + A +T
Sbjct: 108 RLSEGIRVMRMYPGAKLILSGYAGGSEMSHARMLAKVALALGVAKSDIILLETAQDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
A++A+A+ ++ +++VT HMPR E Q + IP P
Sbjct: 168 ARQAAAFVQQ---RTLVLVTSASHMPRAMNEFQSA--GLTPIPAP 207
>gi|332662639|ref|YP_004445427.1| hypothetical protein Halhy_0646 [Haliscomenobacter hydrossis DSM
1100]
gi|332331453|gb|AEE48554.1| protein of unknown function DUF218 [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 54/148 (36%), Gaps = 10/148 (6%)
Query: 48 IRIERAFELLENQIGEKIFISGVHHSV-SKDILLQKIPIR----QDLAECCIDIGYKALN 102
R+ + EL + I ++G ++ +K L ++ + + + + +A N
Sbjct: 101 NRLTQTLELYQQGKIRNILLTGGSSNIITKGQLEAQVVVDFIEDMGIPRTAVIVESQARN 160
Query: 103 TEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENS 161
T NA ++ + +++T HM R ++ +++ L +
Sbjct: 161 TWENALNSTQIIQAKYPKASCVLITSATHMRRARACFRKAGLDIEYYCTDYRRTKLGGWA 220
Query: 162 SIFKIKI----LRVLLIEYLKILLLSIQ 185
+ L E+ +L+ +++
Sbjct: 221 WLKFEPGVIGDWEGLFKEWAGMLVYAMK 248
>gi|324327048|gb|ADY22308.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSAILYVSYAAYDIWSYRFKTDDSVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 135 EVGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 174
>gi|165975946|ref|YP_001651539.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250279|ref|ZP_07336479.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252044|ref|ZP_07533944.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876047|gb|ABY69095.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650895|gb|EFL81051.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860513|gb|EFM92526.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 252
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYTIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I ++G + D + + + TE NA + A ++ +
Sbjct: 124 LPILVTGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|325197310|gb|ADY92766.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 218
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 1 MRYFWYGLFVCLIF-FIMGF---ISFIRYVKQMHIPDHPSVSAIVVLTGEP--------- 47
+RY+ G F +F ++ F + + +P + A +VL G
Sbjct: 12 LRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPYVRADAALVL-GAAAWDKRPSPV 70
Query: 48 --IRIERAFELLENQIGEKIFISGVHHS---VSKDILLQKIPIRQDLAECCIDIGYKALN 102
RI A L +++ KI +G +++ + ++ ++Q + I + N
Sbjct: 71 FRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRN 130
Query: 103 TEGNAQEASAWAEKNNFHHVLIVTHDYHMPRT 134
T N N V+IV+ YH+ R
Sbjct: 131 TYENLNNIRPVLRANGIASVVIVSDPYHLARA 162
>gi|317968099|ref|ZP_07969489.1| hypothetical protein SCB02_01051 [Synechococcus sp. CB0205]
Length = 213
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 11 CLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGV 70
C + + + F P P ++VL G+ R E+ + G + +SG
Sbjct: 35 CAVAWSSRGLVF---------PALPPPQLVLVLGGDVERERVGAEV-AKRDGLPVMVSGG 84
Query: 71 HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYH 130
S + + L + + + Y+A +T N +++ HV++VT H
Sbjct: 85 ----SNPEYAHWLFRGRGLDDTRVLLDYRATDTLSNFTSVVDDLKRSKIRHVVLVTSSDH 140
Query: 131 MPRTFLELQRI--NSTVQFIPYPII--------------SHDLEENSSIFKIKILRVLLI 174
M R + + + + + P + L + + LR
Sbjct: 141 MDRALMVGRVVAGSRGIGLTPLAVPCGERCVPEDWRKVWGDGLRAALWVVSGRDLRDWAA 200
Query: 175 EYLKILLLSIQ 185
E LL ++
Sbjct: 201 ERFGPLLEEVR 211
>gi|167562950|ref|ZP_02355866.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 240
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 54/146 (36%), Gaps = 13/146 (8%)
Query: 38 SAIVVLTGEP-IRIERAFELLEN--QIGEK--IFISGVHH---SVSKDILLQKIPIRQDL 89
+ T + RI++ EL + + + +SG +++ + + + +
Sbjct: 79 DGVAAPTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEADTYARYLLARGV 138
Query: 90 AECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
A + ++ T NA+ +A ++ +++VT Y M R L+ R P
Sbjct: 139 ANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLDFARFG----IAP 194
Query: 150 YPIISHDLEENSSIFKIKILRVLLIE 175
P+ ++ + ++ E
Sbjct: 195 QPVYANRRVAQFGWL-PRTGNLVNAE 219
>gi|165976456|ref|YP_001652049.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307257077|ref|ZP_07538852.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|165876557|gb|ABY69605.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306864448|gb|EFM96356.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 246
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 30/137 (21%)
Query: 27 KQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISG 69
+ + D+ AIVVL G R+ A L+ + + I+G
Sbjct: 68 DNLALEDYKKAQAIVVLGGGVRDSKEIYNPIVVGNQALERMRYA-AYLQKETQLPLLITG 126
Query: 70 VHHS------VSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVL 123
+ + + + KA T+ NAQ + K + ++
Sbjct: 127 SSPNGTSEAKTMANEFQYFFSVPTQW------LEEKAKTTKENAQFSRELLAKEGINKII 180
Query: 124 IVTHDYHMPRTFLELQR 140
+VT+ +HM R + ++
Sbjct: 181 LVTNQWHMKRAKMLFEK 197
>gi|229167811|ref|ZP_04295543.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
gi|228615627|gb|EEK72720.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEEELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|229060751|ref|ZP_04198106.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
gi|228718398|gb|EEL70030.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
Length = 210
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDDVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEENLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|86749502|ref|YP_485998.1| hypothetical protein RPB_2382 [Rhodopseudomonas palustris HaA2]
gi|86572530|gb|ABD07087.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 264
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 35/187 (18%)
Query: 35 PSVSAIVVLTG-----------------EPIRIERAFELLENQIGEKIFISG-------- 69
+ I+VL G R+ A EL + +I SG
Sbjct: 77 RAPDGIIVLGGAIDSEVSAARDAVELDSSAERVMAALELARDYPQARIVYSGGSGNLIQN 136
Query: 70 -VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
V + L + + D + ++ T NA L+VT
Sbjct: 137 SVAEAPIAADLFARFGVAPDRF----VVESRSRTTAENASFTRELVSPKPGEVWLLVTSA 192
Query: 129 YHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFK-----IKILRVLLIEYLKILLLS 183
+HMPR+ + V P + + + F + V E+ +L
Sbjct: 193 FHMPRSITAFRAAGFDVTAAPVDWRTRGWGDAARPFDRLSSGLARTDVAAHEWAGLLAYR 252
Query: 184 IQLSLST 190
+ ++
Sbjct: 253 LSGRTTS 259
>gi|82701477|ref|YP_411043.1| hypothetical protein Nmul_A0343 [Nitrosospira multiformis ATCC
25196]
gi|82409542|gb|ABB73651.1| Protein of unknown function DUF218 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKI 65
+ P ++ AI+VL G R+ A ++ G+ I
Sbjct: 63 VLETPSEKNPFDDTIQAIIVLGGGTYYYAPEYGDHTVGRYTLERVRYAAKIYRL-TGKPI 121
Query: 66 FISGVHH-SVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHHVL 123
+G +Q + ++ ++ + + NT NA ++ A +K +
Sbjct: 122 LTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSSNTRENAYKSFAILQKQGIRQIA 181
Query: 124 IVTHDYHMPRTFLELQRINSTVQ 146
+VTH +HMPR E ++ V
Sbjct: 182 LVTHAWHMPRAAREFEQAGFEVT 204
>gi|212694703|ref|ZP_03302831.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
gi|212662682|gb|EEB23256.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
Length = 252
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 14/157 (8%)
Query: 47 PIRIERAFELLENQIGEKIFISGVHHSVSKDIL---------LQKIPIRQDLAECCIDIG 97
R+ L ++ K+ ++ + +++ + + +
Sbjct: 95 ADRLLEGIRLYKHGCIRKLVLASDGSIIESKDGKGLQGNAADMKQYLADLGMPLEDVILE 154
Query: 98 YKALNTEGNAQEASAWA-EKNNFHHVLIVTHDYHMPRTFLELQRIN--STVQFI-PYP-I 152
+A NT NA L++T HM R+ +P I
Sbjct: 155 TRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNPDTYITDTFPEI 214
Query: 153 ISHDLEENSSIFKIKILRVLLIEYLKILLLSIQLSLS 189
S + L E++ L ++ S
Sbjct: 215 KGEKTNFLPSWHVLASWPELTHEWVGYLYYRLRHKPS 251
>gi|325123318|gb|ADY82841.1| putative SanA protein [Acinetobacter calcoaceticus PHEA-2]
Length = 261
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDH--PSVSAIVVLTGE----------PI 48
+ W ++C +++G F ++K+ + P V AI+VL
Sbjct: 65 LHTLWRFGWLCFWIWLIGLGYFFSFIKENKDTSNNIPPVKAIIVLGSGVENGQPSTILAK 124
Query: 49 RIERAFEL-LENQIGEKIFISGVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNTE 104
R++ A L L+ Q + + G+ S + + + + + +A + + K+ +TE
Sbjct: 125 RLDTAAPLALKQQQAQIVLTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTE 184
Query: 105 GNAQEASAWAEKNNFH---HVLIVTHDYHMPRTFL 136
N + + E+++ + IVT D+H+PR
Sbjct: 185 LNLKNSKPLLEQHHITLDQPIAIVTSDFHIPRAIA 219
>gi|148270249|ref|YP_001244709.1| hypothetical protein Tpet_1119 [Thermotoga petrophila RKU-1]
gi|281412552|ref|YP_003346631.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
gi|147735793|gb|ABQ47133.1| protein of unknown function DUF218 [Thermotoga petrophila RKU-1]
gi|281373655|gb|ADA67217.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
Length = 237
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 2 RYFWYGLFVCLIFFI--MGFISFIRYVK-QMHIPDHPSVSA-IVVLTGEPIRIERAFELL 57
R+F L V F +G F+ ++ + +P A IVVL G R +A + L
Sbjct: 32 RWFLLALAVTAYLFSSYVGEFLFLWSLEKNLDVPATLPNDAVIVVLGGGVERNTKAGDNL 91
Query: 58 ENQIGEKIFISGVH----------------HSVSKDI-LLQKIPIRQDLAECCIDIGYKA 100
+ ++ +GV + + +++ + + E I + ++
Sbjct: 92 SDATLRRLL-TGVQIYQKTKMPILVTGGSLTGLRPEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 101 LNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIP 149
NT NA K +++VT HM R + +V P
Sbjct: 151 RNTYENAFFTRE---KIGDVPIILVTDSIHMRRAVSTFKSFFQSVTPYP 196
>gi|51893168|ref|YP_075859.1| hypothetical protein STH2030 [Symbiobacterium thermophilum IAM
14863]
gi|51856857|dbj|BAD41015.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 225
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 18/149 (12%)
Query: 2 RYFWYGLFVCLIFFIM--GFISFIRYVKQMHIPDHPSVSAIVVLTGE-----------PI 48
R+ L V + + F + + +VL
Sbjct: 13 RWLVRLLAVGTAAVLAINALVYFPGRSRIITADAARPAQVALVLGAGVYADGRPTPMLRD 72
Query: 49 RIERAFELLENQIGEKIFISGVHHSVSKDIL--LQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E A L E K+ +SG H D + +++ + + + + + +T +
Sbjct: 73 RLETALALYEAGKARKLLLSGDHSRPDYDEVNAMRRYLQERGVPPEDLFLDHAGFDTYDS 132
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTF 135
A+A + V++VT +H+PR
Sbjct: 133 MYRAAAIFQ---VDDVIVVTQGFHLPRAL 158
>gi|294789429|ref|ZP_06754666.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294482642|gb|EFG30332.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 224
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 16/131 (12%)
Query: 16 IMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP-----------IRIERAFELLENQIGEK 64
++ + Q P A+VVL G RI +L + +K
Sbjct: 23 VVFCAWQVYDYAQHEKPLPQKADAVVVL-GAAAWGNNPSPVLRERINYGIKLYQQHTVQK 81
Query: 65 IFISGVHHSV---SKDILLQKIPIRQ-DLAECCIDIGYKALNTEGNAQEASAWAEKNNFH 120
+ +G ++ + Q+ +++ ++ + I + ++ +T N ++
Sbjct: 82 MIFTGGTPKFGYPTEAEVAQRYAMQKFNVPQRDIILDTESSSTYENLTNTRTLMHNHHLD 141
Query: 121 HVLIVTHDYHM 131
V+IV+ H+
Sbjct: 142 SVIIVSDPDHL 152
>gi|225568744|ref|ZP_03777769.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
gi|225162243|gb|EEG74862.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
Length = 201
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 49 RIERAFELLENQIGEKIFISGVHHSVS--KDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+E+ LL + + +SG S S + +++ ++ + I ++++T N
Sbjct: 67 RVEKGAGLLREGKVKALLLSGGAVSNSHVEAEVMRDHALKLGVPADVIYTEPRSVSTYHN 126
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRT 134
+ + A +N ++VT+ +H+ +
Sbjct: 127 MKYSKALMSENGLKDCVVVTNGWHLRKA 154
>gi|325965245|ref|YP_004243151.1| hypothetical protein Asphe3_39290 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471332|gb|ADX75017.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 331
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 23/159 (14%)
Query: 6 YGLFVCLIFFIMGFISF------IRYVKQMHIPDHPSVSAIVVLTGE----------PIR 49
G+ + ++G+ F + +P +VVL R
Sbjct: 118 LGVLTGTMAVLVGYFGFVFASYLAYSLIYSSLPPRRRPEYVVVLGSGLAGNAVPPLLAAR 177
Query: 50 IERAFELLENQIGE--KIFIS----GVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
++ A L + G + I G ++ + + Q + I I KA T
Sbjct: 178 LDAAVSLYRGKHGGTIRALIPSGGRGADELTTEGAAMARYLQEQGIPAASILIEDKATTT 237
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
N + ++ + V +VT YH+ R + +R
Sbjct: 238 LENLVFSRNLMDRPD-RPVTVVTSSYHVFRAAMFTRRAG 275
>gi|148977536|ref|ZP_01814115.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
gi|145963187|gb|EDK28454.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
Length = 284
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 11/168 (6%)
Query: 46 EPIRIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNT 103
+R+ +L G K+ +SG VS ++ K+ + +A+ I + A +T
Sbjct: 105 GLMRLSEGIRILRLYPGAKLILSGYGAGTEVSNARMMAKVALALGVAKPDIILLETAKDT 164
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRI------NSTVQFIPYPIISHDL 157
A++A+A+ + +++VT HM R E T I+
Sbjct: 165 WEEARQAAAFVKN---KRMVLVTSASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWN 221
Query: 158 EENSSIFKIKILRVLLIEYLKILLLSIQLSLSTQTASQFFITLIEEIT 205
+ ++ E + ++ S++ L T + ++ E +
Sbjct: 222 KYMPKAIYLEQTERYWHETMGLVWQSLRDWLDTSSDIAEEPIVVPEAS 269
>gi|145629203|ref|ZP_01785002.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145639142|ref|ZP_01794749.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|144978706|gb|EDJ88429.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145271704|gb|EDK11614.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|309750723|gb|ADO80707.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 247
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 66/208 (31%), Gaps = 41/208 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + D+ AIV+L G
Sbjct: 43 ISFTWLYIISTPFTGLLLTDNDDTPALTLDDYKQAQAIVILGGGSYPTKELYAETASGSP 102
Query: 48 --IRI--------ERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCIDI 96
R+ E +L I G+ + L Q + E
Sbjct: 103 QLERLRYAAFLQKETGLPVLTTGYS---LI-GISEGDLMAKELNQFFNVPTQWIEN---- 154
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH- 155
KA NTE NA K+N +++VT+ +HM R ++ V S
Sbjct: 155 --KARNTEENASFTKNILIKDNIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYSSK 212
Query: 156 -DLEENSSIFKIKILR---VLLIEYLKI 179
+L S I + L VLL E++
Sbjct: 213 GNLSAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|228959326|ref|ZP_04121021.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800396|gb|EEM47318.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 219
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP----------IRIERAFE 55
+ L +C + + ++ + + D A +VL+ RI A
Sbjct: 25 FLLMICSAILYVSYAAYDIWSYRFKANDDVKTDAGIVLSAASWNGKPSPVFKERINHAIS 84
Query: 56 LLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASA 112
L +N +KI +G + + + ++Q + E I I K+L TE N + A
Sbjct: 85 LYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAKQ 144
Query: 113 WAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI + Y +
Sbjct: 145 VGIENGIQTYTIVSDPLHMKRAM----RIAKHINIEAYASPTP 183
>gi|68250305|ref|YP_249417.1| hypothetical protein NTHI2008 [Haemophilus influenzae 86-028NP]
gi|145633636|ref|ZP_01789363.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148825756|ref|YP_001290509.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229845236|ref|ZP_04465369.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
gi|229847322|ref|ZP_04467424.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|68058504|gb|AAX88757.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144985513|gb|EDJ92329.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148715916|gb|ABQ98126.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229809747|gb|EEP45471.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|229811831|gb|EEP47527.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
Length = 247
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ + F ++ + + ++ AIV+L G
Sbjct: 43 ISFTWLYIMSVPFTGLLLTNNDDSPALTLDEYKQAQAIVILGGGSYQTKELYAETASGAP 102
Query: 48 --IRIERAFELLENQIGEKIFISGV------HHSVSKDILLQKIPIRQDLAECCIDIGYK 99
R+ A L+ + G I +G + L Q + E K
Sbjct: 103 QLERLRYA-AFLQKETGLPILTTGYSLIGISEGDLMAKELNQFFNVPTQWIEN------K 155
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH--DL 157
A NTE NA K++ +++VT+ +HM R ++ V +L
Sbjct: 156 ARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNL 215
Query: 158 EENSSIFKIKILR---VLLIEYLKI 179
S I + L VLL E++
Sbjct: 216 SAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|209964476|ref|YP_002297391.1| hypothetical protein RC1_1164 [Rhodospirillum centenum SW]
gi|209957942|gb|ACI98578.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 271
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 27/167 (16%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQK 82
+ ++ A +V TG + + + + +
Sbjct: 106 AERLTEIPALARRYPDARIVFTGGSGLVFE-------------------QDLKEAPVARA 146
Query: 83 IPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN 142
R + ++ NT NA + A L+VT HMPR+ +RI
Sbjct: 147 AWERMGFDTARVLFEQESRNTWENALLSRDLAHPVEGEAWLLVTSAMHMPRSVGIFRRIG 206
Query: 143 STVQFIPYPI---ISHDLEENSSIFKIKILRVL---LIEYLKILLLS 183
V +PYP+ + LR L L EY+ +++
Sbjct: 207 WNV--VPYPVDFHVPDRSLYRIGFDLTDGLRSLSYALHEYIGLVVYR 251
>gi|312793878|ref|YP_004026801.1| hypothetical protein Calkr_1698 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181018|gb|ADQ41188.1| protein of unknown function DUF218 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 34 HPSVSAIVVLT----GE------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
I+VL G+ R+ RAFEL + I + G ++S+
Sbjct: 35 PKKSDCIIVLGCAVYGDFPSPFFRERLNRAFELYKKGYARYIIVCGAKGPGENISEAEAG 94
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + + I K+ +T N + K F +IV++ +H+ R L ++
Sbjct: 95 KRYLVERGVLPELILKEDKSFSTYENLLYSKKIMNKKGFKSTIIVSNMFHLRRASLIAKK 154
Query: 141 INSTVQF 147
+ F
Sbjct: 155 LKMNASF 161
>gi|328950417|ref|YP_004367752.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450741|gb|AEB11642.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 190
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 36/188 (19%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------R 49
MR W L FI + QM AIVVL G R
Sbjct: 1 MRKLWAALLCV-------FIWGLASAPQM-------ADAIVVL-GAAQYNGHPSPIFANR 45
Query: 50 IERAFELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
+ A L I ++G S+ + + + + ++ +T N
Sbjct: 46 LNAALALYRQGYAPTILVTGGKQPGDRYSEGEVGCRYLEAAGVPRDALICETRSRSTWEN 105
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
+ A A VLIVT H+PR + QR+ + YP+ E +
Sbjct: 106 LKNARALL---GPARVLIVTDAPHLPRAMMLAQRL--NIDAGGYPVAGRFPLEYRW--RE 158
Query: 167 KILRVLLI 174
+LR+L
Sbjct: 159 AVLRLLTR 166
>gi|312877810|ref|ZP_07737760.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795436|gb|EFR11815.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 34 HPSVSAIVVLT----GE------PIRIERAFELLENQIGEKIFISGV---HHSVSKDILL 80
I+VL G+ R+ RAFEL + I + G ++S+
Sbjct: 35 PKKSDCIIVLGCAVYGDFPSPFFRERLNRAFELYKKGYARYIIVCGAKGPGENISEAEAG 94
Query: 81 QKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
++ + + + I K+ +T N + K F +IV++ +H+ R L ++
Sbjct: 95 KRYLVERGVLPELILKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNMFHLRRASLIAKK 154
Query: 141 INSTVQF 147
+ F
Sbjct: 155 LKMNASF 161
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 31 IPDHPSVSAIVVLTGE-----------PIRIERAFELLENQIGEKIFISG---VHHSVSK 76
+VVL R ++A E L+ +F++G + V +
Sbjct: 81 PSGAQKSDFVVVLGSGLRYGTYLSPEGKRRSDKAIEYLKEYPHLNVFLTGGQGIDEKVPE 140
Query: 77 DILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN--FHHVLIVTHDYHMPRT 134
+++++ + + E I + K+ NT N + + + +H++L+VT D+HMPR
Sbjct: 141 SVIMKEYFLENGIDENRIFLEDKSTNTNENIKFYIDALKDTDMEYHNILLVTSDFHMPRA 200
>gi|34496963|ref|NP_901178.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34102819|gb|AAQ59183.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 254
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 34/190 (17%)
Query: 23 IRYVKQMHIPDHPSVSAIVVLTGEP----------------IRIERAFELLENQIGEKIF 66
+ + D + AIVVL G R+ A L Q G+ +
Sbjct: 69 VERYPPIRPADLAAADAIVVLGGGKRPAPEFGGNAPSSDTLARLRYA-AYLARQSGKPVL 127
Query: 67 ISGVHH-------SVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNF 119
++G V L IR E ++ T NA+ ++ +
Sbjct: 128 VTGGSPLGGEPEGKVMASALHDDYGIRARWVED------RSDTTLDNARLSAEMLKAAGA 181
Query: 120 HHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHD----LEENSSIFKIKILRVLLIE 175
+ +V+ +H+ R Q V P + ++ S + VLL E
Sbjct: 182 TRIALVSQGWHLGRAVPFFQSQGLQVSPAPTGFVRYEGPAFTRYLPSGKAMGDCHVLLRE 241
Query: 176 YLKILLLSIQ 185
Y+ +L ++
Sbjct: 242 YIGLLYYRLR 251
>gi|307256540|ref|ZP_07538321.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864950|gb|EFM96852.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 252
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 17/144 (11%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGE-------PIR--IERA-------FELLENQIG 62
I + + +++ I D+ AIVVL G R I A L Q G
Sbjct: 64 LIQAVTFSEKLTIEDYKKAQAIVVLGGGVRNSHELFGRYAIAAAPLERMRYAAYLHKQTG 123
Query: 63 EKIFISGVHHSVSKDILLQKIPIRQDLAECCID-IGYKALNTEGNAQEASAWAEKNNFHH 121
I +G + D + + + TE NA + A ++
Sbjct: 124 LPILATGGSPEGREPEAKIMAQELHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDR 183
Query: 122 VLIVTHDYHMPRTFLELQRINSTV 145
+++VT+ +HM RT + +R V
Sbjct: 184 IILVTNQWHMKRTKMLFEREGFNV 207
>gi|88807093|ref|ZP_01122605.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
gi|88788307|gb|EAR19462.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
Length = 195
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 11/170 (6%)
Query: 10 VCLIFFIMGFISFIRYVKQMHIPDHPSVS--AIVVLTGEPIRIERAFELLENQIGEKIFI 67
LI ++ +F ++ + I+VL G+ R L Q+ + +
Sbjct: 8 FLLISSLVAGAAFATPLRPFAVAALTRQDPQKILVLGGDADRERIGLRL-ARQLELPLVV 66
Query: 68 SGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTH 127
SG + Q + + L + + + Y+A +T GN + HVL+VT
Sbjct: 67 SGG----TNPEYAQWLMEHEGLGQNEVRLDYRAQDTLGNFTSLVDELQGEEIEHVLLVTS 122
Query: 128 DYHMPRTFLE--LQRINSTVQFIPYPIISHD--LEENSSIFKIKILRVLL 173
+ H+PR + + + ++ P+ + +E+ LR L
Sbjct: 123 EDHLPRALMVGGIVAGSRGIRLTGVPVSCAERCRKESLGKRWGDGLRALA 172
>gi|296137799|ref|YP_003645042.1| hypothetical protein Tpau_0049 [Tsukamurella paurometabola DSM
20162]
gi|296025933|gb|ADG76703.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 185
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
Query: 5 WYGLFVCLIFFIMGFISFIRY--VKQMHIPDHPSVSAIVVLTGEP--IRIERAFELLENQ 60
W + ++F +G ++ + Y Q V A+VVL G R + +L +
Sbjct: 9 WSTAVLVVVF--LGAVAAVGYPVFGQAKQDPLERVDAVVVL-GGEHDGREQYGLQLAKEG 65
Query: 61 IGEKIFISGVHHSVSKDILLQKIPIRQ--DLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
+ +S + D ++ + R+ + C T G A A +
Sbjct: 66 YAPTLVLS--NPYEPDDHVMAPLCDRRVDGIEVLCEVPDPS--TTRGEALFTERLARERG 121
Query: 119 FHHVLIVTHDYHMPRT 134
+ V++V+ YH+PR+
Sbjct: 122 WKKVIVVSWRYHLPRS 137
>gi|229018413|ref|ZP_04175281.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
gi|229024642|ref|ZP_04181087.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228736707|gb|EEL87257.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228742893|gb|EEL93025.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
Length = 210
Score = 59.9 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGMKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYAMKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R RI ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----RIAKHIKIEAYASPTP 174
>gi|317052073|ref|YP_004113189.1| hypothetical protein Selin_1906 [Desulfurispirillum indicum S5]
gi|316947157|gb|ADU66633.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 249
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 38/161 (23%)
Query: 20 ISFIRYVKQMHIP---DHPSVSAIVVLTGEPI------------------RIERAFELLE 58
++Q P D AIV+L G R+ L
Sbjct: 55 AWLHSGLQQHPPPTGKDIRRAQAIVILGGGRDYGAPEFGAEDAPGNATWRRLAYGAHL-A 113
Query: 59 NQIGEKIFISG--VHHSVSKDI------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEA 110
Q G I +SG VH + + L + E + T NA+ +
Sbjct: 114 RQSGLPILVSGGRVHGELHSEAWLMDQALRHSFGLEAQWRE------EHSRTTRENARYS 167
Query: 111 SAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYP 151
+ + + H+L+VT +H+PR E +R ++ IP P
Sbjct: 168 APILQNADITHILLVTQAWHLPRALPEFRR--QGLEVIPAP 206
>gi|309390074|gb|ADO77954.1| protein of unknown function DUF218 [Halanaerobium praevalens DSM
2228]
Length = 253
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 35/166 (21%)
Query: 8 LFVCLIFFIMGFISFIRYVKQMHIPDHPSVS-------------AIVVLTGEP------- 47
L F + F+ F+ + HP + IVVL G
Sbjct: 38 LIRLTAVFSLIFLIFLATAVGARVLVHPLENYAERNLVEVSQKYPIVVLGGGSNYYSAKK 97
Query: 48 --------IRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGY- 98
R+ + +EL + I+ GV ++ + + + + L + +D+ +
Sbjct: 98 TTPSTHSLQRLVKGYELHRSLKTPLIYSGGV--AIGQQNISEADAASEFLQDLGMDLEFY 155
Query: 99 ----KALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQR 140
KA T NA W +++ V + T YHM R+ +
Sbjct: 156 FSETKAQTTFENAAYLRKWIKQHQVKKVYLFTSAYHMLRSMTVFKA 201
>gi|254409533|ref|ZP_05023314.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183530|gb|EDX78513.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 206
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 34 HPSVSAIVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC 93
P AI+ L G R + + + I++S S S +L I ++
Sbjct: 27 SPHPQAILTLGGGRDREKFTAQFAQTHPSLDIWVS----SGSPPDVLYAIFQNANIPIQR 82
Query: 94 IDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPR--TFLELQRINSTVQFIPYP 151
+ + Y+A++T N A ++ N H+ ++T DYH+PR L + ++ F P
Sbjct: 83 VHLDYRAVDTVTNFTSLVADFKRRNIQHIYLITSDYHIPRAKAIAILVLGSQSITFTPVA 142
Query: 152 IISHDLEENSSIFKIKILRVLL 173
+ S+ E+ +R LL
Sbjct: 143 VPSNQPPESWLRILRDSIRALL 164
>gi|3056882|gb|AAC14002.1| unknown [Actinosynnema pretiosum subsp. auranticum]
Length = 336
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 24/162 (14%)
Query: 5 WYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSV------SAIVVLTGE----------PI 48
W +F + G++ F + ++ + V +AIVVL
Sbjct: 123 WVLAAAGSLFLLAGYLGFAFTLFLLYSVLYGRVRKRTGHTAIVVLGAGVPGGRVTPLLAG 182
Query: 49 RIERAFELL----ENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKAL 101
R++RA +L + SG S+ ++ + + + + ++
Sbjct: 183 RLDRALKLYRRAAAKGASPLVVASGGQGPDEPASEAEVMANYLRERGIPDEALLEEREST 242
Query: 102 NTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQRIN 142
+T N + +SA + +L+VT YH+PR + +R
Sbjct: 243 STWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAG 284
>gi|33152333|ref|NP_873686.1| hypothetical protein HD1239 [Haemophilus ducreyi 35000HP]
gi|33148556|gb|AAP96075.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 256
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 23/147 (15%)
Query: 19 FISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLEN-----------------QI 61
I + + +++ I ++ AIVVL G + + EL +
Sbjct: 67 LIQAVSFSEKLTIEEYRQAQAIVVLGGG---VRNSRELFADYAIAATPLERMRYAAYLHK 123
Query: 62 GEKI--FISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALN-TEGNAQEASAWAEKNN 118
++ ++G + + + + + A N TE NA A +K
Sbjct: 124 QTRLPVLVTGGSPTGKQPEANIMAQEFANFFDVQVKWIESASNITEENAHLTKAILDKEG 183
Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTV 145
+++VT+++HM R + +R V
Sbjct: 184 ITKIILVTNEWHMKRAKMLFEREGFNV 210
>gi|17158752|ref|NP_478263.1| hypothetical protein all7616 [Nostoc sp. PCC 7120]
gi|17134701|dbj|BAB77259.1| all7616 [Nostoc sp. PCC 7120]
Length = 228
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 28/173 (16%)
Query: 1 MRYFWYGLFVCLIF---FIMGFISFIRYVKQ-MHIPDHPSVSAIVVLTGE---------- 46
+R+ GL + ++ +I + + + P +V
Sbjct: 19 LRWILLGLVISVLAKPLIATAYIGLMTNGDRYVQPESVPKEQVAIVFGAGILPNDNPTPM 78
Query: 47 -PIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDL--AECCIDIGYKALNT 103
R+E A +L + K+ ++G + +VS + + + DL I + Y +T
Sbjct: 79 LSDRVEAAVKLYKMGKISKLLMTGDNSTVSYNEVRSMLKYAHDLGVPMKNITLDYAGFST 138
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRIN--------STVQFI 148
+ A + H +++T +YH+PRT +++ ++
Sbjct: 139 YESCYRAH---KVFGVHKAVVITQNYHLPRTVYTCRQLGLKTVGLGTPDIEIY 188
>gi|257454427|ref|ZP_05619689.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448193|gb|EEV23174.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 274
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 76/205 (37%), Gaps = 33/205 (16%)
Query: 1 MRYFWYGLFVCLIFFIMGFISFIRYVKQ-MHIPDHPSVS-AIVVLTGEPI---------- 48
++ W +++ +++ F F+ Y+KQ + +HP + AI+VL G
Sbjct: 78 LKKLWQLVWLLFFVWLISFCIFVSYLKQHFNTDNHPKAAQAIIVLGGGTKDNKPTDAVKL 137
Query: 49 RIERAFELLENQIGEKIFIS--GVHHSVSKDI---LLQKIPIRQDLAECCIDIGYKALNT 103
R+++A E++ + I+ G + + ++ I + ++ +T
Sbjct: 138 RLDKASEVIRR-FANALVITSGGFDAGEDVSEAKAMADYLHDTYGISLANISLEEQSTST 196
Query: 104 EGNAQEASAWAEKNNF---HHVLIVTHDYHMPR-TFLELQRINSTVQFIPYPIISHDLEE 159
E N + + ++ VT D+H R + + ++ + +Q + +
Sbjct: 197 ELNFVHSKKILAQQGIALNQPIIAVTSDFHTLRASLIGKRQGYTNLQVVG--------SD 248
Query: 160 NSSIFKIKILRVLLIEYLKILLLSI 184
+ V EY + +
Sbjct: 249 TPWYIRPN---VWFREYFAFISGWL 270
>gi|87123615|ref|ZP_01079466.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
gi|86169335|gb|EAQ70591.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
Length = 214
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 21/151 (13%)
Query: 40 IVVLTGEPIRIERAFELLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYK 99
I+VL G+ R + +L G ++ + V S + R+ L++ + + Y+
Sbjct: 38 ILVLGGDVDREKAGLQL-----GRRLALPVVVSGGSNPEYAHWLMDREGLSQSRVRLDYR 92
Query: 100 ALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL--ELQRINSTVQFIPYPI----- 152
A +T GN ++ H+L+VT H+PR L + ++ P+
Sbjct: 93 AKDTLGNFTSLVDDLKREGVQHMLLVTSRDHLPRAMAVGRLVAGSRGIRLTAVPVACAPR 152
Query: 153 ---------ISHDLEENSSIFKIKILRVLLI 174
+ L + + + L+
Sbjct: 153 CLEESLGKQVGDGLRALAWVLTGRDLKPWAR 183
>gi|108804095|ref|YP_644032.1| hypothetical protein Rxyl_1256 [Rubrobacter xylanophilus DSM 9941]
gi|108765338|gb|ABG04220.1| protein of unknown function DUF218 [Rubrobacter xylanophilus DSM
9941]
Length = 195
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 12/160 (7%)
Query: 22 FIRYVKQMHIPDHPSVSAIVVLTGEP------IRIERAFELLENQIGEKIFI--SGVHHS 73
F + + + V VL G R A L ++ I GV
Sbjct: 21 FSGEMPRPGGAEVAVVLGSQVLPGGRPSGTLMARTLHAARLYRGGRV-RLLIPTGGVGRH 79
Query: 74 V-SKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMP 132
S+ ++ ++ + + + +AL+T +A+ S A VL+VT H
Sbjct: 80 PPSEAEIMARLLRGAGVPGRAVLLEDRALSTWDSARYVSRMARGLGVGRVLVVTDPLHCV 139
Query: 133 RTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVL 172
RT + ++ IP P+ S + + + R +
Sbjct: 140 RTVAAFRHA--GLEAIPEPVYSSPMWRVRWLRLGQFFREM 177
>gi|229012351|ref|ZP_04169528.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
gi|228748987|gb|EEL98835.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
Length = 210
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|163940818|ref|YP_001645702.1| hypothetical protein BcerKBAB4_2882 [Bacillus weihenstephanensis
KBAB4]
gi|229133982|ref|ZP_04262803.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
gi|163863015|gb|ABY44074.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
gi|228649475|gb|EEL05489.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
Length = 210
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPI-----------RIERAF 54
+ L +C I + + ++ + + D A +VL G RI A
Sbjct: 16 FLLMICSIILYVSYAAYDIWSYRFKTDDGVKTDAGIVL-GAASWNGKPSPVFKERINHAI 74
Query: 55 ELLENQIGEKIFISGV---HHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEAS 111
L +N +KI +G + + + ++ + E I I K+L TE N + A
Sbjct: 75 SLYKNGNIKKIIFTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAK 134
Query: 112 AWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH 155
+N IV+ HM R +I ++ Y +
Sbjct: 135 QVGIENGIRTYTIVSDPLHMKRAM----KIAKHIKIEAYASPTP 174
>gi|300312530|ref|YP_003776622.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075315|gb|ADJ64714.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 269
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 51/226 (22%)
Query: 2 RYFWYGLFVCLIFFI--------MGFISFIRYVKQMHIP--DHPSVSAIVVLTGEPIRIE 51
R+ +GL + ++ +G + I ++ + AIV+L RI+
Sbjct: 52 RWRRFGLLLIVLGVATLLVLSTRVGSLLLIAPLENSYPVLRSPGQAQAIVIL--GSGRID 109
Query: 52 RAFEL-------------------LENQIGEKIFISGVHHSVSKDI--------LLQKIP 84
RA E L Q G I ++G + S + L +
Sbjct: 110 RAPEYGGLDDANAIGMKRLQYGAYLHRQSGLPILVTGGNPDGSPESEAAVMARTLERDFA 169
Query: 85 IRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINST 144
+ E ++ T NA ++A ++ +L+VT HMPR
Sbjct: 170 VPVRWQEG------RSNTTYDNATLSAAMLKEAGISRILLVTDSLHMPRAMQVFATTGLQ 223
Query: 145 VQFIPYPIISHDLEENSSIFKIKILRV-----LLIEYLKILLLSIQ 185
VQ P + + + + + L E++ L ++
Sbjct: 224 VQAAPT-VFAGQARTRVTDYLPNAASLQLASYALREWIGQLWYRVR 268
>gi|262404134|ref|ZP_06080689.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
gi|262349166|gb|EEY98304.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
Length = 283
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 49 RIERAFELLENQIGEKIFISG--VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
R+ + G K+ +SG VS ++ ++ + + + I + A +T
Sbjct: 108 RLAEGIRINRMYPGSKMILSGYAGGSEVSHARMMARVALALGVPKSDIILLETAKDTWEE 167
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKI 166
A++A+A+ ++ +++VT HM R E + P + H I
Sbjct: 168 ARQAAAFVQQ---KRMVLVTSASHMKRAMREFEAAGLNPIPAPTNFLGHLNIAQPWDKYI 224
Query: 167 KILRVL------LIEYLKILLLSIQLSLSTQTASQFFITLIEEITV 206
R L E L +L ++ +++ + + E TV
Sbjct: 225 PKARYLEQTEQYWYETLGLLWQKLRDTVAGDVETPLANPAVIEETV 270
>gi|108763026|ref|YP_634765.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
gi|108466906|gb|ABF92091.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
Length = 292
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 16/153 (10%)
Query: 2 RYFWYGLFVCLIFFIMGFISFIRYVKQM-HIPDHPSVSAIVVL-----TGE------PIR 49
+ L V G V + +VVL G R
Sbjct: 90 ARLFRLLMVGAGVLTCGVFGLAWVVDRFGQREQAAPADVLVVLGARVLPGGVPSGALRAR 149
Query: 50 IERAFELLENQIGEKIFISG---VHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGN 106
E A L + ++ SG V+ +L AE C+ + + +T+ N
Sbjct: 150 TEHAVALYHRGVAPRLVFSGGVGVNPPSEARAMLALATRMGVPAEACV-LEEGSHSTDDN 208
Query: 107 AQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQ 139
A+ + V++V+ YH+ R +
Sbjct: 209 ARLTAEVLRGLGARRVVVVSDPYHLLRARNYFR 241
>gi|260582799|ref|ZP_05850585.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
gi|260094125|gb|EEW78027.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
Length = 247
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 41/208 (19%)
Query: 3 YFWYGLFVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEP--------------- 47
+ L++ F ++ + + D+ AIV+L G
Sbjct: 43 ISFTWLYIISTPFTGLLLTDNDDTPALTLDDYKQAQAIVILGGGSYPTKELYAETASGSP 102
Query: 48 --IRI--------ERAFELLENQIGEKIFISGVHHS-VSKDILLQKIPIRQDLAECCIDI 96
R+ E +L I G+ + L Q + E
Sbjct: 103 QLERLRYAAFLQKETGLPVLTTGYS---LI-GISEGDLMAKELNQFFNVPTQWIEN---- 154
Query: 97 GYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISH- 155
KA NTE NA K++ +++VT+ +HM R ++ V
Sbjct: 155 --KARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAASYGSK 212
Query: 156 -DLEENSSIFKIKILR---VLLIEYLKI 179
+L S I + L VLL E++
Sbjct: 213 GNLSAKSFIPDLGALNSNMVLLKEWIGY 240
>gi|119896762|ref|YP_931975.1| hypothetical protein azo0471 [Azoarcus sp. BH72]
gi|119669175|emb|CAL93088.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 283
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 53/188 (28%), Gaps = 45/188 (23%)
Query: 33 DHPSVSAIVVLTGEP-----------------IRIERAFELLENQIGEKIFISGVHHSVS 75
AIV+L G R+ L G + +SG S
Sbjct: 103 AARGAQAIVILGGGRRSHAAEYGGDTVNRLTLERLRYGARLARA-TGLPLLVSGGAPSGD 161
Query: 76 KDI-------LLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHD 128
L + I E + +T NA+ ++A + V++VTH
Sbjct: 162 VPEATLMAAALREDFGIAPRWEEG------GSFDTRDNARLSAAMLRADGVTRVVLVTHA 215
Query: 129 YHMPRTFLELQRINSTVQFIPYPII-------SHDLEENSSIFKIKI-----LRVLLIEY 176
HM R E + +P P D ++ L E+
Sbjct: 216 AHMRRAEAEF--ALHGLAVVPAPTAWLGPGPERADDDDEVWPSLPSQGTAYAGWYALHEW 273
Query: 177 LKILLLSI 184
+ +L +
Sbjct: 274 MGLLAYRL 281
>gi|317489670|ref|ZP_07948174.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|316911264|gb|EFV32869.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
Length = 218
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 25/153 (16%)
Query: 6 YGLFVCLIFFIMGFISFIRYVKQMHIPD---HPS------VSAIVVL------TGEPI-- 48
GL + + ++ + D P AIVVL G P
Sbjct: 5 LGLMLGCMLVVVAVFAATNVATIATTKDRIVEPQSAVGFDADAIVVLGASVFADGTPSGI 64
Query: 49 ---RIERAFELLENQIGEKIFISGVHHSVSKDI--LLQKIPIRQDLAECCIDIGYKALNT 103
R++ L + + K+ +SG + +VS + +++ I Q + I + +T
Sbjct: 65 LRDRLDDGIALYKEGVAPKLIMSGDNSTVSYNEVQVMKDYAISQGVPSHDIFCDHAGFST 124
Query: 104 EGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFL 136
+ A +++ T YH+ R
Sbjct: 125 YESMYRAKH---VFGAERIVVATQTYHLYRALY 154
>gi|298493004|ref|YP_003723181.1| hypothetical protein Aazo_4922 ['Nostoc azollae' 0708]
gi|298234922|gb|ADI66058.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 198
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 22/186 (11%)
Query: 1 MRYFWYGL----FVCLIFFIMGFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFEL 56
M+ +Y L + L F + F+S I + P AI+ L G R + E
Sbjct: 1 MKRSYYLLKKYWILSLASFSLVFLSIIPIRIAIASYQAPHPQAILTLGGGQEREKFTAEF 60
Query: 57 LENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEK 116
+N I+IS + + I + Y+A++T N K
Sbjct: 61 AQNHPNLHIWIS---SGILPAQAFAIFE-EVSIPTERIHLDYRAVDTVTNCTTLVHDFHK 116
Query: 117 NNFHHVLIVTHDYHMPRT--FLELQRINSTVQFIP------------YPIISHDLEENSS 162
+ H+ ++T D+H+PR L + + F P +PI+
Sbjct: 117 YHIKHIYLITSDFHLPRAKTIATLVLGSQGITFTPISIPSERPRESIFPIVRDSGRSLLW 176
Query: 163 IFKIKI 168
I +
Sbjct: 177 IVSGRT 182
>gi|327398427|ref|YP_004339296.1| hypothetical protein Hipma_0260 [Hippea maritima DSM 10411]
gi|327181056|gb|AEA33237.1| protein of unknown function DUF218 [Hippea maritima DSM 10411]
Length = 258
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 25/161 (15%)
Query: 2 RYFWYGLFVCLIFFIM----GFISFIRYVKQMHIPDHPSVSAIVVLTGEPI---RIER-- 52
R+ W+ + + + + G + Y++ + + SA+VVL+G RI+
Sbjct: 42 RFRWFFMVSAFVLWFISTTPGKNLLLSYLEDIKT-SSDTASAVVVLSGGSNPYDRIKTYP 100
Query: 53 -AFE------LLENQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECC-----IDIGYKA 100
AF+ LL + + SG + + Q + +A+ C I K+
Sbjct: 101 EAFKRLMYGILLAKRYNIPLIFSGG--GLKYNDSAQAKNDIEIIAKICNCKIKIYFENKS 158
Query: 101 LNTEGNAQEASAWAEKNNFH-HVLIVTHDYHMPRTFLELQR 140
LNT NA+ S + EK + IVT YH R + +
Sbjct: 159 LNTYQNAKYTSKFFEKMKIKKDIFIVTSAYHQKRANILFRY 199
>gi|318042858|ref|ZP_07974814.1| hypothetical protein SCB01_14194 [Synechococcus sp. CB0101]
Length = 268
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 27/173 (15%)
Query: 24 RYVKQMHIPDHPSVSAIVVLTGEPIRIE----RAFELLENQ-------------IGEKIF 66
+ P A+VVL G +R +A E+ E