HHsearch alignment for GI: 254780582 and conserved domain: COG0742
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair].
Probab=91.28 E-value=1.2 Score=23.87 Aligned_cols=116 Identities=14% Similarity=0.007 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHCCC--CCCCEEEEECCCCCHH-HHHHHCCCCEEE-EEECHHHHHHHHH-------CCCCCEEEECHHH
Q ss_conf 999999999975010--4897599965388111-355312387488-7305899983231-------1686236533365
Q gi|254780582|r 20 TTDAISKVLSTTWDD--VTGCRLLGLGYAIPFF-SCFHGKVERTLA-FMPAGQGATNWPD-------QYFSSTALVSEGN 88 (242)
Q Consensus 20 ~~~~~~~~l~~~l~~--~~g~~vLdiGcg~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~d~~~ 88 (242)
T Consensus 25 T~drVREalFNil~~~~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~~ 104 (187)
T COG0742 25 TTDRVREALFNILAPDEIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDALR 104 (187)
T ss_pred CCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHH
T ss_conf 71688899998734344579889994687647689998578856999965989999999999984876125998400899
Q ss_pred C-CCCCC--CCCCHHHHHHHH-HHCCHHHHHHH--HHHHCCCCCEEEEEECCC
Q ss_conf 6-77547--202002202477-52299999999--998469998899973387
Q gi|254780582|r 89 L-PLADS--SVDCVLMVHYLE-FAEDPFLMLHE--IWRVLTSGGRMIVVVPNK 135 (242)
Q Consensus 89 L-Pf~~~--sfD~Vi~~h~LE-~~~dp~~~L~E--i~RvLkPgG~lii~~~n~ 135 (242)
T Consensus 105 ~L~~~~~~~~FDlVflDPPy~~~l~~~~~~~~~~~~~~~L~~~~~iv~E~~~~ 157 (187)
T COG0742 105 ALKQLGTREPFDLVFLDPPYAKGLLDKELALLLLEENGWLKPGALIVVEHDKD 157 (187)
T ss_pred HHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 98722778851289968997536066899998887658778896899982787