HHsearch alignment for GI: 254780582 and conserved domain: COG2890
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis].
Probab=97.24 E-value=0.0023 Score=39.24 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=64.3
Q ss_pred EEEEECCCCCHHHHHHHCCC---CEEEEEECHHHHHHHHHC---CC-CCEEEECHHHCCCCCCCCCCHHHH-----HH--
Q ss_conf 59996538811135531238---748873058999832311---68-623653336567754720200220-----24--
Q gi|254780582|r 39 RLLGLGYAIPFFSCFHGKVE---RTLAFMPAGQGATNWPDQ---YF-SSTALVSEGNLPLADSSVDCVLMV-----HY-- 104 (242)
Q Consensus 39 ~vLdiGcg~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~-~~~~~~d~~~LPf~~~sfD~Vi~~-----h~-- 104 (242)
T Consensus 113 ~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~~l~~~~~~~~dlf~~~~~~fDlIVsNPPYip~~~~ 192 (280)
T COG2890 113 RILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERNGLVRVLVVQSDLFEPLRGKFDLIVSNPPYIPAEDP 192 (280)
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEEEECCCCCCCCCC
T ss_conf 18996588319999999618988799998999999999999998289747987400333468885779968998888521
Q ss_pred ------HHH------------HCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf ------775------------22999999999984699988999733877403456532766565578889999999628
Q gi|254780582|r 105 ------LEF------------AEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSGQPYSWYQMISLLREAN 166 (242)
Q Consensus 105 ------LE~------------~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~r~~~~~~l~~~l~~~g 166 (242)
T Consensus 193 ~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~~g~l~le~g~------------------~q~~~v~~~~~~~~ 254 (280)
T COG2890 193 ELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKPGGVLILEIGL------------------TQGEAVKALFEDTG 254 (280)
T ss_pred CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC------------------CCHHHHHHHHHHCC
T ss_conf 137421358979987248777899999999899872868289999769------------------84899999999749
Q ss_pred C
Q ss_conf 7
Q gi|254780582|r 167 F 167 (242)
Q Consensus 167 f 167 (242)
T Consensus 255 ~ 255 (280)
T COG2890 255 F 255 (280)
T ss_pred C
T ss_conf 8