HHsearch alignment for GI: 254780582 and conserved domain: PTZ00146
>PTZ00146 fibrillarin; Provisional.
Probab=96.77 E-value=0.004 Score=37.90 Aligned_cols=151 Identities=13% Similarity=0.139 Sum_probs=85.5
Q ss_pred HHHHHH--HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC----CCCEEEEEECHHHH---HHHHHC
Q ss_conf 899996--128898999999999999750104897599965388111355312----38748873058999---832311
Q gi|254780582|r 6 VELRQF--YSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK----VERTLAFMPAGQGA---TNWPDQ 76 (242)
Q Consensus 6 ~~l~~w--Y~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~ 76 (242)
T Consensus 108 iEYRvWnPfRSKLAAaIl~----Gl~-~i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~ 182 (296)
T PTZ00146 108 IEYRVWNPFRSKLAAAIYG----GVA-SIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKR 182 (296)
T ss_pred EEEEEECCCCHHHHHHHHC----CCC-CCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf 7878647550188999976----964-44437999899851467986556665017886199997064668899999722
Q ss_pred CC-CCEEEECHH---HCCCCCCCCCCHHHHHHHHHHCCHHH---HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCC
Q ss_conf 68-623653336---56775472020022024775229999---999999846999889997338774034565327665
Q gi|254780582|r 77 YF-SSTALVSEG---NLPLADSSVDCVLMVHYLEFAEDPFL---MLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGS 149 (242)
Q Consensus 77 ~~-~~~~~~d~~---~LPf~~~sfD~Vi~~h~LE~~~dp~~---~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~ 149 (242)
T Consensus 183 R~NIvPIleDAr~P~kYr~lV~~VDvIf~D-----VAQpdQarI~~~Na~~FLK~gG~~~i~IKAr-sI----Dst~~p~ 252 (296)
T PTZ00146 183 RTNIVPIIEDARYPQKYRMLVPMVDCIFAD-----VAQPDQARIVALNAQHFLKNGGHFVISIKAN-CI----DSTADPE 252 (296)
T ss_pred CCCCEEEECCCCCHHHHHHHCCCCCEEEEC-----CCCHHHHHHHHHHHHHHHHCCCEEEEEEECC-CC----CCCCCHH
T ss_conf 798335777789746755424555589961-----7876589999999998531698899999726-63----2567989
Q ss_pred CCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf 6557888999999962876212578
Q gi|254780582|r 150 GQPYSWYQMISLLREANFTLSITSR 174 (242)
Q Consensus 150 ~r~~~~~~l~~~l~~~gf~~~~~~~ 174 (242)
T Consensus 253 ---~VF~~Ev~kL~~~~f~~~e~v~ 274 (296)
T PTZ00146 253 ---VVFASEVQKLKKEGLKPKEQLT 274 (296)
T ss_pred ---HHHHHHHHHHHHCCCCEEEEEE
T ss_conf ---9999999999872896368870