HHsearch alignment for GI: 254780582 and conserved domain: PTZ00146

>PTZ00146 fibrillarin; Provisional.
Probab=96.77  E-value=0.004  Score=37.90  Aligned_cols=151  Identities=13%  Similarity=0.139  Sum_probs=85.5

Q ss_pred             HHHHHH--HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC----CCCEEEEEECHHHH---HHHHHC
Q ss_conf             899996--128898999999999999750104897599965388111355312----38748873058999---832311
Q gi|254780582|r    6 VELRQF--YSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK----VERTLAFMPAGQGA---TNWPDQ   76 (242)
Q Consensus         6 ~~l~~w--Y~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~   76 (242)
T Consensus       108 iEYRvWnPfRSKLAAaIl~----Gl~-~i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~  182 (296)
T PTZ00146        108 IEYRVWNPFRSKLAAAIYG----GVA-SIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKR  182 (296)
T ss_pred             EEEEEECCCCHHHHHHHHC----CCC-CCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
T ss_conf             7878647550188999976----964-44437999899851467986556665017886199997064668899999722


Q ss_pred             CC-CCEEEECHH---HCCCCCCCCCCHHHHHHHHHHCCHHH---HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCC
Q ss_conf             68-623653336---56775472020022024775229999---999999846999889997338774034565327665
Q gi|254780582|r   77 YF-SSTALVSEG---NLPLADSSVDCVLMVHYLEFAEDPFL---MLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGS  149 (242)
Q Consensus        77 ~~-~~~~~~d~~---~LPf~~~sfD~Vi~~h~LE~~~dp~~---~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~  149 (242)
T Consensus       183 R~NIvPIleDAr~P~kYr~lV~~VDvIf~D-----VAQpdQarI~~~Na~~FLK~gG~~~i~IKAr-sI----Dst~~p~  252 (296)
T PTZ00146        183 RTNIVPIIEDARYPQKYRMLVPMVDCIFAD-----VAQPDQARIVALNAQHFLKNGGHFVISIKAN-CI----DSTADPE  252 (296)
T ss_pred             CCCCEEEECCCCCHHHHHHHCCCCCEEEEC-----CCCHHHHHHHHHHHHHHHHCCCEEEEEEECC-CC----CCCCCHH
T ss_conf             798335777789746755424555589961-----7876589999999998531698899999726-63----2567989


Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             6557888999999962876212578
Q gi|254780582|r  150 GQPYSWYQMISLLREANFTLSITSR  174 (242)
Q Consensus       150 ~r~~~~~~l~~~l~~~gf~~~~~~~  174 (242)
T Consensus       253 ---~VF~~Ev~kL~~~~f~~~e~v~  274 (296)
T PTZ00146        253 ---VVFASEVQKLKKEGLKPKEQLT  274 (296)
T ss_pred             ---HHHHHHHHHHHHCCCCEEEEEE
T ss_conf             ---9999999999872896368870