HHsearch alignment for GI: 254780582 and conserved domain: TIGR00080

>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=94.58  E-value=0.022  Score=33.67  Aligned_cols=100  Identities=10%  Similarity=0.117  Sum_probs=57.7

Q ss_pred             HHHHHCC--CCCCCEEEEECCCCCHHHHHHHCC----CCEEEEEECHHHHHHHHH----------CCCC-CEEEECHHHC
Q ss_conf             9997501--048975999653881113553123----874887305899983231----------1686-2365333656
Q gi|254780582|r   27 VLSTTWD--DVTGCRLLGLGYAIPFFSCFHGKV----ERTLAFMPAGQGATNWPD----------QYFS-STALVSEGNL   89 (242)
Q Consensus        27 ~l~~~l~--~~~g~~vLdiGcg~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~d~~~L   89 (242)
T Consensus        71 ~m~~yL~nhL~~~~~vLeiG~GSGY~aavlA~~v~~~G~V~SiEri~~L~~~A~~~Lk~hhseqL~~~NV~v~~GDG~-~  149 (228)
T TIGR00080        71 KMTEYLENHLKPGAKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELVEKARRRLKKHHSEQLGLDNVIVIEGDGR-Q  149 (228)
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC-C
T ss_conf             999988852140355665047855899999998713971899853578899999876543144406886589977886-5


Q ss_pred             CCC-CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             775-47202002202477522999999999984699988999733
Q gi|254780582|r   90 PLA-DSSVDCVLMVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVP  133 (242)
Q Consensus        90 Pf~-~~sfD~Vi~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~  133 (242)
T Consensus       150 G~~~~APYd~I~~~AA~k~i--P~AL~~Q----L~eGG~L~~Pv~  188 (228)
T TIGR00080       150 GWEEKAPYDAILVTAAAKEI--PKALIDQ----LEEGGILVLPVG  188 (228)
T ss_pred             CHHHCCCCCEEEEECCCCCC--CHHHHHH----HHHCCEEEECCE
T ss_conf             71024883527752378987--6578999----972898862000