HHsearch alignment for GI: 254780582 and conserved domain: TIGR00406
>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=98.27 E-value=1e-06 Score=58.42 Aligned_cols=120 Identities=10% Similarity=0.038 Sum_probs=86.2
Q ss_pred CCCC--CEEEEECCCCCHHHHHH--HCCCCEEEEEECHHHHHHHHHCCCCCEEE---------ECHHHCCCCCCCCCCHH
Q ss_conf 0489--75999653881113553--12387488730589998323116862365---------33365677547202002
Q gi|254780582|r 34 DVTG--CRLLGLGYAIPFFSCFH--GKVERTLAFMPAGQGATNWPDQYFSSTAL---------VSEGNLPLADSSVDCVL 100 (242)
Q Consensus 34 ~~~g--~~vLdiGcg~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~LPf~~~sfD~Vi 100 (242)
T Consensus 192 d~k~kh~~viD~GCGSGIL~IAa~~LGa~~~~g~D~DP~Ave~~r~N~~lN~v~~~~~~~~~~~vPe~~~~~e~~~DViV 271 (330)
T TIGR00406 192 DLKDKHKKVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLENSVPELEQPIEGKADVIV 271 (330)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEE
T ss_conf 47776654787126717899999975123112213772899999976874588645764320578753453225667578
Q ss_pred HHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
Q ss_conf 2024775229999999999846999889997338774034565327665655788899999996287621257
Q gi|254780582|r 101 MVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSGQPYSWYQMISLLREANFTLSITS 173 (242)
Q Consensus 101 ~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~r~~~~~~l~~~l~~~gf~~~~~~ 173 (242)
T Consensus 272 ANiLA~v---i~~L~p~~~~L~~~~G~lilSGIl~-----------------~~~~sV~~ay~q~GF~~~~~~ 324 (330)
T TIGR00406 272 ANILAEV---IKELYPQFSRLVKPGGHLILSGILE-----------------TQAQSVCEAYEQAGFTVVEIL 324 (330)
T ss_pred ECCHHHH---HHHHHHHHHHHCCCCCCEEEHHHHH-----------------HHHHHHHHHHHCCCCEEHHHH
T ss_conf 8002457---8764135513106899657413476-----------------479999999855794634346