HHsearch alignment for GI: 254780582 and conserved domain: pfam01739
>pfam01739 CheR CheR methyltransferase, SAM binding domain. CheR proteins are part of the chemotaxis signaling mechanism in bacteria. CheR methylates the chemotaxis receptor at specific glutamate residues. CheR is an S-adenosylmethionine- dependent methyltransferase - the C-terminal domain (this one) binds SAM.
Probab=97.68 E-value=0.00033 Score=44.10 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCCEEEEECCCCCH----HHHHHHCC--------CCEEEEEECHHHHHHHHHCC----------------------CCCE
Q ss_conf 89759996538811----13553123--------87488730589998323116----------------------8623
Q gi|254780582|r 36 TGCRLLGLGYAIPF----FSCFHGKV--------ERTLAFMPAGQGATNWPDQY----------------------FSST 81 (242)
Q Consensus 36 ~g~~vLdiGcg~g~----~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 81 (242)
T Consensus 30 ~~lrIWsagCStGEE~YSlAi~l~e~~~~~~~~~~~I~atDI~~~~l~~Ar~G~Y~~~~~~~~p~~~~~ryF~~~~~~~~ 109 (194)
T pfam01739 30 RRVRIWSAGCSSGEEPYSLAMLLAETLPNALPWDFKILATDIDLSALEKARAGVYPERELEGLPPELLRRYFTKGAGGGY 109 (194)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCCE
T ss_conf 95599973688995189999999997432578744999973988999999878988999845999999962860789948
Q ss_pred ------------EEECHHHCCCCCCCCCCHHHHHHHHHHC--CHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf ------------6533365677547202002202477522--99999999998469998899973
Q gi|254780582|r 82 ------------ALVSEGNLPLADSSVDCVLMVHYLEFAE--DPFLMLHEIWRVLTSGGRMIVVV 132 (242)
Q Consensus 82 ------------~~~d~~~LPf~~~sfD~Vi~~h~LE~~~--dp~~~L~Ei~RvLkPgG~lii~~ 132 (242)
T Consensus 110 ~i~~~lr~~V~F~~~NL~~~~~-~~~~DlIfCRNVlIYF~~~~~~~vl~~l~~~L~~gG~L~lG~ 173 (194)
T pfam01739 110 RVKPEIKEMVLFEYHNLLDYPP-LGDFDVIFCRNVLIYFDEETQRKILNRFASALKPGGYLFLGH 173 (194)
T ss_pred EECHHHHCCCEEEECCCCCCCC-CCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 7688997116685466556887-675039998021013799999999999999848994999807