HHsearch alignment for GI: 254780582 and conserved domain: pfam02527
>pfam02527 GidB rRNA small subunit methyltransferase G. This is a family of bacterial glucose inhibited division proteins these are probably involved in the regulation of cell devision. GidB has been shown to be a methyltransferase G specific to the rRNA small subunit. Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. GidB specifically methylates the N7 position of a guanosine in 16S rRNA.
Probab=95.99 E-value=0.12 Score=29.45 Aligned_cols=98 Identities=8% Similarity=0.014 Sum_probs=58.5
Q ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHH--CCCCEEEEEECHHH-------HHHHHHCCCCCEEEECHHHCCCCCCCCCCH
Q ss_conf 975010489759996538811135531--23874887305899-------983231168623653336567754720200
Q gi|254780582|r 29 STTWDDVTGCRLLGLGYAIPFFSCFHG--KVERTLAFMPAGQG-------ATNWPDQYFSSTALVSEGNLPLADSSVDCV 99 (242)
Q Consensus 29 ~~~l~~~~g~~vLdiGcg~g~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~LPf~~~sfD~V 99 (242)
T Consensus 42 ~~~~~~-~~~~ilDiGSGaGfPGi~LAI~~p~~~~~LvEs~~KK~~FL~~v~~~L~L~nv~v~~~R~E~~~~-~~~~D~v 119 (184)
T pfam02527 42 LEYLDN-IRIKVADVGSGAGFPGIPLAIAFPDKKLTLLESLLKKINFLEELKKELNLENVTIVHARAEEYQH-EEQYDVI 119 (184)
T ss_pred HHHCCC-CCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCC-CCCCCEE
T ss_conf 774266-79868834798884679999967785599992828999999999998599976999560441464-4678789
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 220247752299999999998469998899973
Q gi|254780582|r 100 LMVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVV 132 (242)
Q Consensus 100 i~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~ 132 (242)
T Consensus 120 ~aRA----~a~l~~ll~~~~~~l~~~g~~i~~K 148 (184)
T pfam02527 120 TSRA----VASLNELTEWALPLLKPGGYFLAYK 148 (184)
T ss_pred EECH----HCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 9810----0579999999998638898999988