HHsearch alignment for GI: 254780583 and conserved domain: COG0595

>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].

Probab=99.17  E-value=4.3e-11  Score=92.57  Aligned_cols=122  Identities=20%  Similarity=0.186  Sum_probs=91.0

Q ss_pred             CEEEEEEECCCCEEEEECCCC----H-----HH---HHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCC-CEEEECC
Q ss_conf             626999988998499986999----8-----99---999999859964399985898433000001111000-1012000
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD----T-----YI---ISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFN-CTIFGPL   80 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd----~-----~~---i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~-~~v~~~~   80 (256)
T Consensus        23 N-~~vve~~--~~i~i~D~G~~fp~~~~~gvDliIPd~~yl~~n~~kvkgI~lTHgHeDHIGaip~ll~~~~~~piy~s~   99 (555)
T COG0595          23 N-MYVVEYG--DDIIILDAGLKFPEDDLLGVDLIIPDFSYLEENKDKVKGIFLTHGHEDHIGALPYLLKQVLFAPIYASP   99 (555)
T ss_pred             C-EEEEEEC--CCEEEEECCCCCCCCCCCCCCEEECCHHHHHHCCCCCEEEEECCCCHHHCCCHHHHHHCCCCCCEECCH
T ss_conf             2-3899978--968999776566864355555882582774315002139994687444323467898527768444477


Q ss_pred             CCCCCC----------C--CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCEEEEC
Q ss_conf             123432----------3--3220331010011112223310255445675226861--46543137704304
Q gi|254780583|r   81 EESSKI----------P--GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFM--NDHFLCVGDTLFSL  138 (256)
Q Consensus        81 ~~~~~i----------~--~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~--~~~~lFtGDtLF~~  138 (256)
T Consensus       100 lt~~Li~~k~~~~~~~~~~~~~~ev~~~~~i~~~~~~v~f~~vtHSIPds~g~~i~Tp~G~Iv~TGDFk~d~  171 (555)
T COG0595         100 LTAALIKEKLKEHGLFKNENELHEVKPGSEIKFGSFEVEFFPVTHSIPDSLGIVIKTPEGNIVYTGDFKFDP  171 (555)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCEEECC
T ss_conf             669999989887321135674399479985776767999996035574516899987984389968778558