HHsearch results for GI: 254780583 and protein with PDBid: 1vme_A
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=99.90 E-value=5e-24 Score=175.01 Aligned_cols=155 Identities=19% Similarity=0.158 Sum_probs=118.9
Q ss_pred CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHHC--CCEEEECCCCCCCC
Q ss_conf 626999988998499986999---89999999985-9-96439998589843300000111100--01012000123432
Q gi|254780583|r 14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKFF--NCTIFGPLEESSKI 86 (256)
Q Consensus 14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~~--~~~v~~~~~~~~~i 86 (256)
| +|||.++ +.+++||||. .+.+++.+++. + .+|++|++||.|+||+||+..|.+++ +++|+++......+
T Consensus 53 N-sYLI~~~--~~~vLIDtg~~~~~~~~l~~l~~~i~~~~I~yIi~TH~H~DH~Ggl~~l~~~~~~~~~i~~~~~~~~~~ 129 (410)
T 1vme_A 53 N-AYLVKLN--GANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIASNFGKRLL 129 (410)
T ss_dssp E-EEEEECS--SCEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHH
T ss_pred E-EEEEEEC--CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHH
T ss_conf 9-9999979--957999199756799999999975797676899949396537754999999709998999788886420
Q ss_pred C-----CCCEEEEEHHCCCCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCEEEECCCCC-CCCCC---H--------
Q ss_conf 3-----32203310100111122233102554-45675226861465431377043046134-46663---1--------
Q gi|254780583|r 87 P-----GIDHGLSDGDTFDFGSHPIKIIATPG-HTIGHICYHFMNDHFLCVGDTLFSLGCGR-IFEDS---Y-------- 148 (256)
Q Consensus 87 ~-----~~~~~l~dgd~i~ig~~~~~vi~tPG-HT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~~G~---~-------- 148 (256)
. .....+++|+.+++|+.+++++++|| |+|+++++|. ++++||||.++.-+|+. ++..+ .
T Consensus 130 ~~~~~~~~~~~v~~g~~l~lG~~~l~~i~~P~~H~p~~~~~y~--~~iLFsgD~~g~~~~~~~~~d~~~~~~e~~~~~~~ 207 (410)
T 1vme_A 130 EGFYGIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVT 207 (410)
T ss_dssp HHHHCCCCCEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHH
T ss_pred HHCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCEEE--CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 1016765316835799998667269999789988899710212--89899886343567787324764025678899999
Q ss_pred -----------HHHHHHHHHHHCCCCCCEEECCCCCH
Q ss_conf -----------56776654420134465020166520
Q gi|254780583|r 149 -----------AEMFESLEKIKSFSDKTHIYFGHEYT 174 (256)
Q Consensus 149 -----------~~l~~Sl~kl~~Lp~~t~i~pGHeYt 174 (256)
.++.++|+||..|+.+ .|+|||-..
T Consensus 208 ~yy~~i~~p~~~~v~~~L~ki~~L~i~-~I~PgHGpi 243 (410)
T 1vme_A 208 KYIVTVIGHYKNYILEGAEKLSSLKIK-ALLPGHGLI 243 (410)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTSCCS-EEEESSSCB
T ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCCC-EEECCCCHH
T ss_conf 998875063289999999998659988-996088067