HHsearch results for GI: 254780583 and protein with PDBid: 2vw8_A
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.97 E-value=2.4e-29 Score=209.41 Aligned_cols=191 Identities=18% Similarity=0.191 Sum_probs=140.2
Q ss_pred CCEEEEEEECCCCEEEEECCC---CHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCC
Q ss_conf 762699998899849998699---98999999998599---643999858984330000011110-00101200012343
Q gi|254780583|r 13 DNFCILIHNHKYRLTAAIDAP---DTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSK 85 (256)
Q Consensus 13 DNy~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~ 85 (256)
-| +|+|.+.+ +.+++||+| +.+.+.+.+.+.++ +|++|++||.|+||+||+..|++. ++++||++..+...
T Consensus 24 ~~-~yll~~g~-~~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~ 101 (303)
T 2vw8_A 24 VP-VFLLRLGE-ASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQA 101 (303)
T ss_dssp SC-EEEEEEET-TEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHH
T ss_pred CE-EEEEEECC-CCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHHCCCCCEEEECHHHHHH
T ss_conf 27-99999799-86899959898529999999998289824279899590998650863455421678669944889998
Q ss_pred C------------------------------CCCCEEEEEHHCCCCCC-CCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
Q ss_conf 2------------------------------33220331010011112-2233102554456752268614654313770
Q gi|254780583|r 86 I------------------------------PGIDHGLSDGDTFDFGS-HPIKIIATPGHTIGHICYHFMNDHFLCVGDT 134 (256)
Q Consensus 86 i------------------------------~~~~~~l~dgd~i~ig~-~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDt 134 (256)
+ ...+..+.+|+.+++|+ ..++++++||||+||+|+|+++.++|||||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~~PGHt~g~~~~~~~~~~~lf~GD~ 181 (303)
T 2vw8_A 102 WKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDA 181 (303)
T ss_dssp TTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEETTTTEEEEETT
T ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEECCCCEEEECCC
T ss_conf 73630134577777654322102455555666785694799989857822673266799699875637179999998283
Q ss_pred EEE--CCCCC---CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 430--46134---466631567766544201344650201665204588987750234478999999999888578
Q gi|254780583|r 135 LFS--LGCGR---IFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQN 205 (256)
Q Consensus 135 LF~--~g~Gr---~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~ 205 (256)
++. ...|+ .+.++.+++.+||+||.+|++++.|+|||.....+-..+..++..-....+....+...+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~sl~rl~~l~~~~~i~PgHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (303)
T 2vw8_A 182 LGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMG 257 (303)
T ss_dssp TCEECTTTCSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSCEEEHHHHHTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4777889776688999779999999999976899989999999733898999999999999999999999986578