HHSEARCH alignment of GI: 254780583 and SCOP domain: d1vmea2

Alignment
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.85  E-value=3e-21  Score=155.42  Aligned_cols=153  Identities=20%  Similarity=0.150  Sum_probs=114.1

Q ss_pred             EEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHHC--CCEEEECCCCCCCCC-
Q ss_conf             6999988998499986999---89999999985-9-96439998589843300000111100--010120001234323-
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKFF--NCTIFGPLEESSKIP-   87 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~~--~~~v~~~~~~~~~i~-   87 (256)
                      +|||.+++  .+++||+|.   ...+++.+++. + .+|++|++||.|.||+||+..+.+..  .+.++++......+. 
T Consensus        42 ~yLI~~~~--~~vLIDtG~~~~~~~~~~~l~~~~~~~~I~~IilTH~H~DH~Gg~~~~~~~~~~~~~i~~~~~~~~~~~~  119 (250)
T d1vmea2          42 AYLVKLNG--ANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIASNFGKRLLEG  119 (250)
T ss_dssp             EEEEECSS--CEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHH
T ss_pred             EEEEEECC--EEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCHHHHHHHHCCCCEEEEECHHHHHCCCC
T ss_conf             99999899--7899939881689999999986478546669997888833444299999755762599726566410222


Q ss_pred             ----CCCEEEEEHHCCCCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCEEEECCCCCC-CCC---------------
Q ss_conf             ----32203310100111122233102554-456752268614654313770430461344-666---------------
Q gi|254780583|r   88 ----GIDHGLSDGDTFDFGSHPIKIIATPG-HTIGHICYHFMNDHFLCVGDTLFSLGCGRI-FED---------------  146 (256)
Q Consensus        88 ----~~~~~l~dgd~i~ig~~~~~vi~tPG-HT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~-~~G---------------  146 (256)
                          .....+.+|+.+.+++.+++++++|| |+.++++++.  .+++|+||+....+++.. ++.               
T Consensus       120 ~~~~~~~~~~~~g~~~~l~~~~l~~i~tP~~h~~~~~~~~~--~~~l~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (250)
T d1vmea2         120 FYGIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKY  197 (250)
T ss_dssp             HHCCCCCEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEE--CCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
T ss_conf             35543222333110576066215898468862358503775--1368860304420478745778743167788998874


Q ss_pred             -------CHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf             -------315677665442013446502016652
Q gi|254780583|r  147 -------SYAEMFESLEKIKSFSDKTHIYFGHEY  173 (256)
Q Consensus       147 -------~~~~l~~Sl~kl~~Lp~~t~i~pGHeY  173 (256)
                             +.+++.+||+||.+|+.++ |+|||-.
T Consensus       198 ~~~~~~~~~~~~~~sl~~l~~l~~~~-I~PGHGp  230 (250)
T d1vmea2         198 IVTVIGHYKNYILEGAEKLSSLKIKA-LLPGHGL  230 (250)
T ss_dssp             HHHHHGGGHHHHHHHHHHHHTSCCSE-EEESSSC
T ss_pred             HCCCCCCCHHHHHHHHHHHHCCCCCE-EECCCCH
T ss_conf             21344641999999999987899899-9988976


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: ROO-like flavoprotein TM0755, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]