HHSEARCH alignment of GI: 254780583 and SCOP domain: d2gmna1

Alignment
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}
Probab=99.96  E-value=1.2e-28  Score=203.30  Aligned_cols=154  Identities=20%  Similarity=0.294  Sum_probs=126.0

Q ss_pred             EEEEEECCCCEEEEECCC---CHHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC---
Q ss_conf             699998899849998699---989999999985996---43999858984330000011110001012000123432---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP---DTYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI---   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i---   86 (256)
                      +|||.+++  .+++||||   ..+.+.+.+++.+++   +++|++||.|.||+||+..|++.++++||++..+...+   
T Consensus        29 ~~lI~~~~--~~vLIDtG~~~~~~~~~~~i~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~  106 (264)
T d2gmna1          29 VYVIKTSQ--GLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGG  106 (264)
T ss_dssp             CEEEEETT--EEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHHCCEEEEEGGGHHHHHHT
T ss_pred             EEEEEECC--EEEEECCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf             99999899--9999839996109999999997399803417999798785320104677886198588500012101233


Q ss_pred             ---------------CCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEC--------CCCC-
Q ss_conf             ---------------3322033101001111222331025544567522686146543137704304--------6134-
Q gi|254780583|r   87 ---------------PGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSL--------GCGR-  142 (256)
Q Consensus        87 ---------------~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~--------g~Gr-  142 (256)
                                     ...+..+++|+++.+|+.+++++++||||+||+||+++....+++||.+|.+        .+|+ 
T Consensus       107 ~~~~~~~~~~~~~~~~~~d~~~~~g~~i~lg~~~~~v~~~PGHt~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  186 (264)
T d2gmna1         107 YYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVALNRLVGQP  186 (264)
T ss_dssp             CCTTCTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSSC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf             11111113443334443148986401000144223356689889886899996566763478799956873677762678


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             466631567766544201344650201665
Q gi|254780583|r  143 IFEDSYAEMFESLEKIKSFSDKTHIYFGHE  172 (256)
Q Consensus       143 ~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHe  172 (256)
                      .+.++.+++.+||+++.+|+.+ .|+|||-
T Consensus       187 ~~~~~~~~~~~sl~~l~~l~~d-~v~pgHg  215 (264)
T d2gmna1         187 TYAGIVDDYRATFAKAKAMKID-VLLGPHP  215 (264)
T ss_dssp             SSTTHHHHHHHHHHHHHHSCCS-EEECSSG
T ss_pred             CCCCCHHHHHHHHHHHHCCCCC-EEECCCC
T ss_conf             8999999999999999759999-9999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Bradyrhizobium japonicum [TaxId: 375]