HHSEARCH alignment of GI: 254780583 and SCOP domain: d2i7ta1

Alignment
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=1.7e-11  Score=92.29  Aligned_cols=126  Identities=13%  Similarity=0.103  Sum_probs=80.5

Q ss_pred             EEEEECC---CEEEEEEECCCCEEEEECCCC-----HHHHHHHHHHCC-CCEEEEEECCCCHHHHCHHHHHHHH--CCCE
Q ss_conf             3011057---626999988998499986999-----899999999859-9643999858984330000011110--0010
Q gi|254780583|r    7 AISLYHD---NFCILIHNHKYRLTAAIDAPD-----TYIISKMLREKG-WFLTHIFNTHHHIDHTRANLNLKKF--FNCT   75 (256)
Q Consensus         7 ~ip~~~D---Ny~YlI~d~~t~~~viIDpgd-----~~~i~~~l~~~~-~~i~~Il~TH~H~DHigg~~~l~~~--~~~~   75 (256)
                      |+.-..+   | +|+|..+  +..+++|.|-     .......+.... -++++|++||.|.||+||++.+...  ++.+
T Consensus         8 plGG~~eIG~n-~~lv~~~--~~~il~D~G~~~~~~~~~~~p~~~~~~~~~id~i~lTH~H~DH~ggLp~l~~~~~~~~p   84 (451)
T d2i7ta1           8 PLGAGQEVGRS-CIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGR   84 (451)
T ss_dssp             EEESSSSSSSC-EEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSE
T ss_pred             ECCCCCCCCCC-EEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCHHHHCCHHHHHHHCCCCCC
T ss_conf             73478864113-9999999--93999958999886632237775678975699999898817876956888975489988


Q ss_pred             EEECCCCCCCCCC----------------------------CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEC--C
Q ss_conf             1200012343233----------------------------220331010011112223310255445675226861--4
Q gi|254780583|r   76 IFGPLEESSKIPG----------------------------IDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFM--N  125 (256)
Q Consensus        76 v~~~~~~~~~i~~----------------------------~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~--~  125 (256)
                      ||++......+..                            ....+.-++....++..++.+.+ ||++|+..++++  .
T Consensus        85 Iy~s~~T~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~H~~Gs~~~~i~~~~  163 (451)
T d2i7ta1          85 TFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHA-GHVLGAAMFMIEIAG  163 (451)
T ss_dssp             EEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEEC-CSSTTCEEEEEEETT
T ss_pred             EEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEECCCCEEEECCEEEEEECC-CCCCCCEEEEEECCC
T ss_conf             8823667666665545554310012334567589998766403200477327508879998226-888875057764177


Q ss_pred             CCCCCCCCEEE
Q ss_conf             65431377043
Q gi|254780583|r  126 DHFLCVGDTLF  136 (256)
Q Consensus       126 ~~~lFtGDtLF  136 (256)
                      ..+++|||.=+
T Consensus       164 ~~i~~tgD~~~  174 (451)
T d2i7ta1         164 VKLLYTGDFSR  174 (451)
T ss_dssp             EEEEECCSCCC
T ss_pred             CEEEECCCCCC
T ss_conf             24784477777


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage and polyadenylation specificity factor subunit 3
species: Human (Homo sapiens) [TaxId: 9606]