HHSEARCH alignment of GI: 254780583 and SCOP domain: d2i7xa1

Alignment
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.27  E-value=2.9e-12  Score=97.21  Aligned_cols=119  Identities=13%  Similarity=0.010  Sum_probs=81.0

Q ss_pred             EEEEEECCCCEEEEECCCC------HHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHH------CCCEEEECCCCC
Q ss_conf             6999988998499986999------8999999998599643999858984330000011110------001012000123
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD------TYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKF------FNCTIFGPLEES   83 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd------~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~------~~~~v~~~~~~~   83 (256)
                      +||+.-+  +..++||.|-      ......++++.--+|++|++||.|.||+|+++.|.+.      +++|||+.....
T Consensus        17 c~ll~~~--~~~iLlDcG~~~~~~~~~~~~~~~~~~~~~IdaillTH~H~DHiGalP~L~~~~~~~~~~~~pIy~T~~T~   94 (514)
T d2i7xa1          17 GSVVRFD--NVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVI   94 (514)
T ss_dssp             CEEEEET--TEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHH
T ss_pred             EEEEEEC--CEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEEECHHHH
T ss_conf             8999989--96999989998676565565665530746487999899986787851799985152468886799688999


Q ss_pred             CC-------------------CCC-----------CCEEEEEHHCCCCCCC--CCCCCC-CCCCCCCCCEEEEC--CCCC
Q ss_conf             43-------------------233-----------2203310100111122--233102-55445675226861--4654
Q gi|254780583|r   84 SK-------------------IPG-----------IDHGLSDGDTFDFGSH--PIKIIA-TPGHTIGHICYHFM--NDHF  128 (256)
Q Consensus        84 ~~-------------------i~~-----------~~~~l~dgd~i~ig~~--~~~vi~-tPGHT~g~i~~~~~--~~~~  128 (256)
                      ..                   .+.           .-..++-++.+.+++.  .+.+.. ..||++|+.++.+.  ..++
T Consensus        95 ~l~~~~l~d~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~y~e~~~i~~~~~~~~~~~~~aGHilGsa~~~I~~~~~~I  174 (514)
T d2i7xa1          95 NLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCISTYSEKL  174 (514)
T ss_dssp             HHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEEEEEECSSCEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCEEE
T ss_conf             99999999999974420555667899999999997440378997598258765379997127777776699999799699


Q ss_pred             CCCCCEEE
Q ss_conf             31377043
Q gi|254780583|r  129 LCVGDTLF  136 (256)
Q Consensus       129 lFtGDtLF  136 (256)
                      +||||.-+
T Consensus       175 vytGD~~~  182 (514)
T d2i7xa1         175 VYAKRWNH  182 (514)
T ss_dssp             EECSSCCS
T ss_pred             EEEECCCC
T ss_conf             99702477


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage factor two protein 2, CFT2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]