HHsearch alignment of GI: 254780584 and MMDB domain: 2jl6_1_

>2jl6_1 (1:) 50S ribosomal protein L28, 50S ribosomal protein L25; methylation, translation, paromomycin, tRNA-binding, tRNA, zinc, mRNA, ribosome, repressor, RNA-binding; 3.45A {Thermus thermophilus} PDB: 2jl8_1
Probab=99.92  E-value=1.8e-27  Score=184.71  Aligned_cols=76  Identities=20%  Similarity=0.320  Sum_probs=73.7

Q ss_pred             CCCCCCCCCCCCCCCCCCC-------------HHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHH
Q ss_conf             9854101178553677223-------------323023742555248999985577868999997245302364188779
Q gi|254780584|r    1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR   67 (97)
Q Consensus         1 Msr~C~itGk~~~~Gn~vs-------------hs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~   67 (97)
                      ||++|+||||+|++||+||             ||+++|+|+|.||||+++||||  |++++++|||+|||||+|.||+|+
T Consensus         1 Ma~~C~itGK~~~~Gn~vs~~g~~~~~G~~~~hs~~kTkR~~~PNlq~kr~~~~--g~~v~lrvstk~LrtI~K~G~~~~   78 (89)
T 2jl6_1            1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEITFRVAASHIPKVYELVERAA   78 (89)
T ss_dssp             --CCCSSSCCCCEEEEEEEEESCCTTTSSSCCEEEEEEEEEECCCBCCBCCEET--TEECCBCCBGGGHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEC--CEEEEEEEEHHHHHHHHHHHHHCC
T ss_conf             977644369802547718744742224775212457533173378458999989--999999999699663999875112


Q ss_pred             HHHHCCHHHHH
Q ss_conf             99729844553
Q gi|254780584|r   68 FLSNSKKENLS   78 (97)
Q Consensus        68 yLl~~~~~~Ls   78 (97)
                      |++.+.+.+||
T Consensus        79 ~~~~~~~~~l~   89 (89)
T 2jl6_1           79 AAAAAAAAAAA   89 (89)
T ss_dssp             CHHHHHHHHCC
T ss_pred             CCCCCCCCCCC
T ss_conf             22212223579