HHsearch alignment of GI: 254780584 and MMDB domain: 2jz6_A_

>2jz6_A (A:) 50S ribosomal protein L28; structure, NESG, ribonucleoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Thermotoga maritima MSB8}
Probab=99.91  E-value=6.6e-25  Score=169.44  Aligned_cols=66  Identities=29%  Similarity=0.468  Sum_probs=64.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHH
Q ss_conf             9854101178553677223323023742555248999985577868999997245302364188779
Q gi|254780584|r    1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR   67 (97)
Q Consensus         1 Msr~C~itGk~~~~Gn~vshs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~   67 (97)
                      ||++|++|||+|++||+||||+++|+|+|+||||++++|||+ |++++++|||+|||||++.||+|.
T Consensus         6 Mar~C~i~GK~~~~Gn~vShs~~kTkR~~~pNlq~~r~~~~~-g~~~ki~vstr~Lrti~k~g~~~~   71 (77)
T 2jz6_A            6 MAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKSGKVKKYVGQ   71 (77)
T ss_dssp             CCCCCTTTCCCCCCCCCCCCSCCCCSSSCBTTEEEEEEEETT-TEEEEEEEEHHHHHHCCSCCCCCC
T ss_pred             EEEECCCCCCCCCCCCCEEECCCCCCCEECCCEEEEEEEECC-CCEEEEEEEHHHHHHCCHHHHHHH
T ss_conf             763333057856558706675863576243762899999139-979999999799654378899997