HHsearch results for GI: 254780584 and protein with PDBid: 2jz6_A
>2jz6_A 50S ribosomal protein L28; structure, NESG, ribonucleoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Thermotoga maritima MSB8} SCOP: d.325.1.1
Probab=99.91 E-value=9.1e-26 Score=173.67 Aligned_cols=70 Identities=29% Similarity=0.542 Sum_probs=67.0
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHHHHHHCCHH
Q ss_conf 985410117855367722332302374255524899998557786899999724530236418877999729844
Q gi|254780584|r 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 (97)
Q Consensus 1 Msr~C~itGk~~~~Gn~vshs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~yLl~~~~~ 75 (97)
|||+||||||++++||+||||+++|+|+|+||||++++|+|+ |++++|+|||+|||| ||||+|++++++.
T Consensus 6 Mar~C~i~GK~~~~Gn~vShs~~kTkR~~~pNlq~~r~~~~~-g~~vrlkv~t~~lrt----g~i~k~~~~~~~~ 75 (77)
T 2jz6_A 6 MAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS----GKVKKYVGQVSEV 75 (77)
T ss_dssp CCCCCTTTCCCCCCCCCCCCSCCCCSSSCBTTEEEEEEEETT-TEEEEEEEEHHHHHH----CCSCCCCCCCCSC
T ss_pred EEEECCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEEEECC-CCEEEEEEEHHHHHH----CCHHHHHHHHHHC
T ss_conf 763344157847669707665862476053752899999439-979999999799543----4788999977664