HHSEARCH alignment of GI: 254780584 and SCOP domain: d2zjru1

Alignment

Probab=99.76  E-value=5.9e-21  Score=143.48  Aligned_cols=64  Identities=19%  Similarity=0.204  Sum_probs=60.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHH--CCCHH
Q ss_conf             9854101178553677223323023742555248999985577868999997245302364--18877
Q gi|254780584|r    1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER--QGGLD   66 (97)
Q Consensus         1 Msr~C~itGk~~~~Gn~vshs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K--~GGlD   66 (97)
                      |+..|+++||.+++||+||||+++|+|+|.||||.+++|+|  +++++++|||+|||||||  .+|+|
T Consensus         7 ~~~~~~~~GK~~~~Gn~vsh~~~~TkR~f~PNLq~~ri~~~--g~~~klkVst~~lRtI~K~~~~~~~   72 (72)
T d2zjru1           7 VVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIREN--GQVKTVWLSANALRTLSKGPYKGIE   72 (72)
T ss_dssp             CCCCCCCCCEESCCCTTTCSCCEECCCCCCCCCCCCCCCCS--SSCCCCCCCHHHHHHHHSSCCSSCC
T ss_pred             ECCEEEEECCCCCCCCCEEECCCCCCCEECCCCEEEEEEEC--CEEEEEEEEHHHEEEECCCCCCCCC
T ss_conf             33789972554023886602288557466353089999978--8759999993753245103344579

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: L28p-like
superfamily: L28p-like
family: Ribosomal protein L28
domain: Ribosomal protein L28 (L28p)
species: Deinococcus radiodurans [TaxId: 1299]