BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780584|ref|YP_003064997.1| 50S ribosomal protein L28 [Candidatus Liberibacter asiaticus str. psy62] (97 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|126739957|ref|ZP_01755647.1| ribosomal protein L28 [Roseobacter sp. SK209-2-6] gi|126718776|gb|EBA15488.1| ribosomal protein L28 [Roseobacter sp. SK209-2-6] Length = 114 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 67/96 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 19 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLGRGIKLRISAAALRSVD 78 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K + LS ++ +I K + ++ Sbjct: 79 HRGGLDAFLAKAKDDELSTAALKVKKEIAKAQAAEA 114 >gi|260431018|ref|ZP_05784989.1| 50S ribosomal protein L28 [Silicibacter lacuscaerulensis ITI-1157] gi|260414846|gb|EEX08105.1| 50S ribosomal protein L28 [Silicibacter lacuscaerulensis ITI-1157] Length = 106 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 50/95 (52%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 12 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 71 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL+ +K E+LS ++ +I K + Sbjct: 72 HRGGLDAFLAKAKDEDLSPNALKVKKEIAKAQASA 106 >gi|319406327|emb|CBI79964.1| Ribosomal protein L28 [Bartonella sp. AR 15-3] Length = 129 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 74/97 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LR+S ALRSVE Sbjct: 33 MSRACELTGKAVQYGNNVSHANNKTRRRFLPNLCNVTLISELLQQSYRLRVSASALRSVE 92 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +EK + Sbjct: 93 HRGGLDNFLIKADDKELSQRGRLLKRQIMKKKAEKVA 129 >gi|99080512|ref|YP_612666.1| 50S ribosomal protein L28 [Ruegeria sp. TM1040] gi|122398295|sp|Q1GIW2|RL28_SILST RecName: Full=50S ribosomal protein L28 gi|99036792|gb|ABF63404.1| LSU ribosomal protein L28P [Ruegeria sp. TM1040] Length = 96 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 68/96 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K E LSA ++ +I K + ++ Sbjct: 61 HRGGLDAFLAKAKDEELSAAALKVKKEIAKAQAAEA 96 >gi|259419342|ref|ZP_05743259.1| 50S ribosomal protein L28 [Silicibacter sp. TrichCH4B] gi|259345564|gb|EEW57418.1| 50S ribosomal protein L28 [Silicibacter sp. TrichCH4B] Length = 96 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 66/96 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K LS ++ +I K + ++ Sbjct: 61 HRGGLDAFLAKAKDAELSDAALKVKKEIAKAQAAQA 96 >gi|56695875|ref|YP_166226.1| 50S ribosomal protein L28 [Ruegeria pomeroyi DSS-3] gi|67461277|sp|Q5LUS9|RL28_SILPO RecName: Full=50S ribosomal protein L28 gi|56677612|gb|AAV94278.1| ribosomal protein L28 [Ruegeria pomeroyi DSS-3] Length = 95 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 51/95 (53%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKTRRRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTRRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL+ +K E+LS ++ +I K + Sbjct: 61 HRGGLDAFLAKAKDEDLSDAALKVKKEIAKAQAAA 95 >gi|163737710|ref|ZP_02145127.1| GTP-binding protein LepA [Phaeobacter gallaeciensis BS107] gi|163744072|ref|ZP_02151439.1| ribosomal protein L28 [Phaeobacter gallaeciensis 2.10] gi|161382688|gb|EDQ07090.1| ribosomal protein L28 [Phaeobacter gallaeciensis 2.10] gi|161389236|gb|EDQ13588.1| GTP-binding protein LepA [Phaeobacter gallaeciensis BS107] Length = 96 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLNRGIKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K + LS ++ +I K + ++ Sbjct: 61 HRGGLDAFLAKAKDDELSNTALKVKKEIAKAQAAEA 96 >gi|197104188|ref|YP_002129565.1| 50S ribosomal protein L28 [Phenylobacterium zucineum HLK1] gi|226699143|sp|B4RFQ5|RL28_PHEZH RecName: Full=50S ribosomal protein L28 gi|196477608|gb|ACG77136.1| 50S ribosomal protein L28 [Phenylobacterium zucineum HLK1] Length = 98 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CE+T M G+ VSH+N KT+RRF+PNL ++T++SD + Q LR++ ALR+V+ Sbjct: 1 MSRRCEITGVGPMVGHNVSHSNIKTKRRFMPNLTKVTVLSDALGQNVTLRVTNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD L ++ E LS R ++ QI K++E+ + Sbjct: 61 AKGGLDAVLLKARDEVLSPRALKIKRQIKAKLAEQPA 97 >gi|310816617|ref|YP_003964581.1| 50S ribosomal protein L28 [Ketogulonicigenium vulgare Y25] gi|308755352|gb|ADO43281.1| 50S ribosomal protein L28 [Ketogulonicigenium vulgare Y25] Length = 98 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/88 (53%), Positives = 61/88 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M GN VSHANNKT+RRFLPNL +TL SD++ + + LR+S LRSV+ Sbjct: 1 MSRRCELTGKGPMVGNNVSHANNKTKRRFLPNLQDVTLQSDVLGRSFTLRVSAAGLRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD +L+ +K LS L+ +I Sbjct: 61 HRGGLDAYLARAKDVELSDNALKLKKEI 88 >gi|254476141|ref|ZP_05089527.1| ribosomal protein L28 [Ruegeria sp. R11] gi|214030384|gb|EEB71219.1| ribosomal protein L28 [Ruegeria sp. R11] Length = 96 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 50/96 (52%), Positives = 67/96 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K E LS+ ++ +I K + + Sbjct: 61 HRGGLDAFLAKAKDEELSSAALKVKKEIAKAQAANA 96 >gi|239833067|ref|ZP_04681396.1| ribosomal protein L28 [Ochrobactrum intermedium LMG 3301] gi|239825334|gb|EEQ96902.1| ribosomal protein L28 [Ochrobactrum intermedium LMG 3301] Length = 118 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 59/97 (60%), Positives = 71/97 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+V GN VSHANNKTRRRFLPNLC +TL+S+ + Q Y+LR+S ALRSVE Sbjct: 21 MSRACELTGKSVQYGNNVSHANNKTRRRFLPNLCNVTLMSETLGQSYRLRVSANALRSVE 80 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL S + LS R R L+ QI KK +E + Sbjct: 81 HRGGLDAFLVKSDDKELSQRARLLKRQIAKKQAEAVA 117 >gi|110678983|ref|YP_681990.1| ribosomal protein L28 [Roseobacter denitrificans OCh 114] gi|109455099|gb|ABG31304.1| ribosomal protein L28 [Roseobacter denitrificans OCh 114] Length = 120 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 49/91 (53%), Positives = 66/91 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+GN VSHANNKTRRRFLPNL +TL S+ + + ++ RIS ALR+V+ Sbjct: 22 MSRVCELTGKGPMTGNNVSHANNKTRRRFLPNLNDVTLQSEALGRGFKFRISAAALRTVD 81 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD+F++ +K +LSA ++ I K Sbjct: 82 HRGGLDKFMAKAKDSDLSANALKVKKAISKA 112 >gi|260427227|ref|ZP_05781206.1| 50S ribosomal protein L28 [Citreicella sp. SE45] gi|260421719|gb|EEX14970.1| 50S ribosomal protein L28 [Citreicella sp. SE45] Length = 96 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 68/96 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+G+ VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRVCELTGKGPMTGHNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISASALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD+FL+ +K LS L+ +I K + K+ Sbjct: 61 HRGGLDKFLAKAKDTELSTNALKLKKEIAKAQAAKA 96 >gi|89055915|ref|YP_511366.1| 50S ribosomal protein L28 [Jannaschia sp. CCS1] gi|122497849|sp|Q28LS1|RL28_JANSC RecName: Full=50S ribosomal protein L28 gi|88865464|gb|ABD56341.1| LSU ribosomal protein L28P [Jannaschia sp. CCS1] Length = 96 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 73/96 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+GN VSHANNKT+RRFLPNL +TL SD+++++++ RIS ALR+V+ Sbjct: 1 MSRVCELTGKGPMTGNNVSHANNKTKRRFLPNLSDVTLGSDLLDRRFKFRISNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD F++ +K + LS R ++ +I+K + ++ Sbjct: 61 HRGGLDAFMAKAKDDELSTRALKIKKEIVKAQAAQA 96 >gi|153008253|ref|YP_001369468.1| 50S ribosomal protein L28 [Ochrobactrum anthropi ATCC 49188] gi|166226592|sp|A6WXD5|RL28_OCHA4 RecName: Full=50S ribosomal protein L28 gi|151560141|gb|ABS13639.1| ribosomal protein L28 [Ochrobactrum anthropi ATCC 49188] Length = 99 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 59/96 (61%), Positives = 71/96 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+V GN VSHANNKTRRRFLPNLC +TL+S+ + Q Y+LR+S ALRSVE Sbjct: 1 MSRACELTGKSVQYGNNVSHANNKTRRRFLPNLCNVTLMSETLGQSYRLRVSANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL S + LS R R L+ QI KK +E + Sbjct: 61 HRGGLDAFLVKSDDKELSQRARLLKRQIAKKQAEAA 96 >gi|114706269|ref|ZP_01439171.1| 50S ribosomal protein L28 [Fulvimarina pelagi HTCC2506] gi|114538130|gb|EAU41252.1| 50S ribosomal protein L28 [Fulvimarina pelagi HTCC2506] Length = 100 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 64/96 (66%), Positives = 75/96 (78%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K VMSGN VSHANNKTRRRFLPNLC +TLISD + Q+Y+L++S ALRSVE Sbjct: 1 MSRVCELTGKGVMSGNNVSHANNKTRRRFLPNLCSVTLISDALGQRYRLKVSAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL S + LS R R L+ QI KK++E S Sbjct: 61 HRGGLDAFLLKSHENELSQRARLLKRQIAKKLAETS 96 >gi|114327278|ref|YP_744435.1| 50S ribosomal protein L28 [Granulibacter bethesdensis CGDNIH1] gi|114315452|gb|ABI61512.1| LSU ribosomal protein L28P [Granulibacter bethesdensis CGDNIH1] Length = 133 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 44/96 (45%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNKTRRRFLPNL L+SD + +LR+S A+R+VE Sbjct: 34 MSRRCQITGKGVLTGNNVSHANNKTRRRFLPNLQVAGLLSDTLGTSVRLRLSTRAIRTVE 93 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG+D FL + L L+ +I + ++K+ Sbjct: 94 KNGGIDAFLLGTPDRQLPTEALELKRRITRAQAKKA 129 >gi|17986340|ref|NP_538974.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M] gi|23502863|ref|NP_698990.1| 50S ribosomal protein L28 [Brucella suis 1330] gi|62290860|ref|YP_222653.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. 9-941] gi|82700772|ref|YP_415346.1| 50S ribosomal protein L28 [Brucella melitensis biovar Abortus 2308] gi|161619931|ref|YP_001593818.1| 50S ribosomal protein L28 [Brucella canis ATCC 23365] gi|163844035|ref|YP_001628439.1| 50S ribosomal protein L28 [Brucella suis ATCC 23445] gi|189025077|ref|YP_001935845.1| 50S ribosomal protein L28 [Brucella abortus S19] gi|225628209|ref|ZP_03786244.1| ribosomal protein L28 [Brucella ceti str. Cudo] gi|225853449|ref|YP_002733682.1| 50S ribosomal protein L28 [Brucella melitensis ATCC 23457] gi|237816370|ref|ZP_04595363.1| ribosomal protein L28 [Brucella abortus str. 2308 A] gi|254690152|ref|ZP_05153406.1| 50S ribosomal protein L28 [Brucella abortus bv. 6 str. 870] gi|254694642|ref|ZP_05156470.1| 50S ribosomal protein L28 [Brucella abortus bv. 3 str. Tulya] gi|254696267|ref|ZP_05158095.1| 50S ribosomal protein L28 [Brucella abortus bv. 2 str. 86/8/59] gi|254700652|ref|ZP_05162480.1| 50S ribosomal protein L28 [Brucella suis bv. 5 str. 513] gi|254705022|ref|ZP_05166850.1| 50S ribosomal protein L28 [Brucella suis bv. 3 str. 686] gi|254707461|ref|ZP_05169289.1| 50S ribosomal protein L28 [Brucella pinnipedialis M163/99/10] gi|254708997|ref|ZP_05170808.1| 50S ribosomal protein L28 [Brucella pinnipedialis B2/94] gi|254713576|ref|ZP_05175387.1| 50S ribosomal protein L28 [Brucella ceti M644/93/1] gi|254716070|ref|ZP_05177881.1| 50S ribosomal protein L28 [Brucella ceti M13/05/1] gi|254731185|ref|ZP_05189763.1| 50S ribosomal protein L28 [Brucella abortus bv. 4 str. 292] gi|256030523|ref|ZP_05444137.1| 50S ribosomal protein L28 [Brucella pinnipedialis M292/94/1] gi|256045618|ref|ZP_05448496.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. Rev.1] gi|256059984|ref|ZP_05450168.1| 50S ribosomal protein L28 [Brucella neotomae 5K33] gi|256112342|ref|ZP_05453263.1| 50S ribosomal protein L28 [Brucella melitensis bv. 3 str. Ether] gi|256158509|ref|ZP_05456407.1| 50S ribosomal protein L28 [Brucella ceti M490/95/1] gi|256253928|ref|ZP_05459464.1| 50S ribosomal protein L28 [Brucella ceti B1/94] gi|256258406|ref|ZP_05463942.1| 50S ribosomal protein L28 [Brucella abortus bv. 9 str. C68] gi|256263069|ref|ZP_05465601.1| 50S ribosomal protein L28 [Brucella melitensis bv. 2 str. 63/9] gi|256370415|ref|YP_003107926.1| 50S ribosomal protein L28 [Brucella microti CCM 4915] gi|260169428|ref|ZP_05756239.1| 50S ribosomal protein L28 [Brucella sp. F5/99] gi|260546125|ref|ZP_05821865.1| LSU ribosomal protein L28P [Brucella abortus NCTC 8038] gi|260567510|ref|ZP_05837980.1| ribosomal protein L28 [Brucella suis bv. 4 str. 40] gi|260755689|ref|ZP_05868037.1| LSU ribosomal protein L28P [Brucella abortus bv. 6 str. 870] gi|260758914|ref|ZP_05871262.1| LSU ribosomal protein L28P [Brucella abortus bv. 4 str. 292] gi|260760637|ref|ZP_05872980.1| LSU ribosomal protein L28P [Brucella abortus bv. 2 str. 86/8/59] gi|260884715|ref|ZP_05896329.1| 50S ribosomal protein L28 [Brucella abortus bv. 9 str. C68] gi|261214964|ref|ZP_05929245.1| LSU ribosomal protein L28P [Brucella abortus bv. 3 str. Tulya] gi|261217836|ref|ZP_05932117.1| LSU ribosomal protein L28P [Brucella ceti M13/05/1] gi|261221066|ref|ZP_05935347.1| 50S ribosomal protein L28 [Brucella ceti B1/94] gi|261314949|ref|ZP_05954146.1| LSU ribosomal protein L28P [Brucella pinnipedialis M163/99/10] gi|261316494|ref|ZP_05955691.1| LSU ribosomal protein L28P [Brucella pinnipedialis B2/94] gi|261321314|ref|ZP_05960511.1| LSU ribosomal protein L28P [Brucella ceti M644/93/1] gi|261323957|ref|ZP_05963154.1| 50S ribosomal protein L28 [Brucella neotomae 5K33] gi|261751158|ref|ZP_05994867.1| LSU ribosomal protein L28P [Brucella suis bv. 5 str. 513] gi|261755721|ref|ZP_05999430.1| LSU ribosomal protein L28P [Brucella suis bv. 3 str. 686] gi|261758952|ref|ZP_06002661.1| ribosomal protein L28 [Brucella sp. F5/99] gi|265987567|ref|ZP_06100124.1| 50S ribosomal protein L28 [Brucella pinnipedialis M292/94/1] gi|265992039|ref|ZP_06104596.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. Rev.1] gi|265993775|ref|ZP_06106332.1| 50S ribosomal protein L28 [Brucella melitensis bv. 3 str. Ether] gi|265997026|ref|ZP_06109583.1| 50S ribosomal protein L28 [Brucella ceti M490/95/1] gi|294851247|ref|ZP_06791920.1| large subunit ribosomal protein L28 [Brucella sp. NVSL 07-0026] gi|297247245|ref|ZP_06930963.1| large subunit ribosomal protein L28 [Brucella abortus bv. 5 str. B3196] gi|54039146|sp|P66141|RL28_BRUSU RecName: Full=50S ribosomal protein L28 gi|54041846|sp|P66140|RL28_BRUME RecName: Full=50S ribosomal protein L28 gi|75496122|sp|Q57AP2|RL28_BRUAB RecName: Full=50S ribosomal protein L28 gi|123547363|sp|Q2YR56|RL28_BRUA2 RecName: Full=50S ribosomal protein L28 gi|189042425|sp|A9M9A0|RL28_BRUC2 RecName: Full=50S ribosomal protein L28 gi|189042426|sp|B0CJB7|RL28_BRUSI RecName: Full=50S ribosomal protein L28 gi|226738040|sp|B2S8R7|RL28_BRUA1 RecName: Full=50S ribosomal protein L28 gi|254801345|sp|C0RFQ6|RL28_BRUMB RecName: Full=50S ribosomal protein L28 gi|17981927|gb|AAL51238.1| lsu ribosomal protein l28p [Brucella melitensis bv. 1 str. 16M] gi|23348891|gb|AAN30905.1| ribosomal protein L28 [Brucella suis 1330] gi|62196992|gb|AAX75292.1| RpmB, ribosomal protein L28 [Brucella abortus bv. 1 str. 9-941] gi|82616873|emb|CAJ11972.1| Ribosomal protein L28:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar Abortus 2308] gi|161336742|gb|ABX63047.1| ribosomal protein L28 [Brucella canis ATCC 23365] gi|163674758|gb|ABY38869.1| ribosomal protein L28 [Brucella suis ATCC 23445] gi|189020649|gb|ACD73371.1| Ribosomal protein L28 [Brucella abortus S19] gi|225617034|gb|EEH14081.1| ribosomal protein L28 [Brucella ceti str. Cudo] gi|225641814|gb|ACO01728.1| ribosomal protein L28 [Brucella melitensis ATCC 23457] gi|237788437|gb|EEP62652.1| ribosomal protein L28 [Brucella abortus str. 2308 A] gi|256000578|gb|ACU48977.1| 50S ribosomal protein L28 [Brucella microti CCM 4915] gi|260096232|gb|EEW80108.1| LSU ribosomal protein L28P [Brucella abortus NCTC 8038] gi|260157028|gb|EEW92108.1| ribosomal protein L28 [Brucella suis bv. 4 str. 40] gi|260669232|gb|EEX56172.1| LSU ribosomal protein L28P [Brucella abortus bv. 4 str. 292] gi|260671069|gb|EEX57890.1| LSU ribosomal protein L28P [Brucella abortus bv. 2 str. 86/8/59] gi|260675797|gb|EEX62618.1| LSU ribosomal protein L28P [Brucella abortus bv. 6 str. 870] gi|260874243|gb|EEX81312.1| 50S ribosomal protein L28 [Brucella abortus bv. 9 str. C68] gi|260916571|gb|EEX83432.1| LSU ribosomal protein L28P [Brucella abortus bv. 3 str. Tulya] gi|260919650|gb|EEX86303.1| 50S ribosomal protein L28 [Brucella ceti B1/94] gi|260922925|gb|EEX89493.1| LSU ribosomal protein L28P [Brucella ceti M13/05/1] gi|261294004|gb|EEX97500.1| LSU ribosomal protein L28P [Brucella ceti M644/93/1] gi|261295717|gb|EEX99213.1| LSU ribosomal protein L28P [Brucella pinnipedialis B2/94] gi|261299937|gb|EEY03434.1| 50S ribosomal protein L28 [Brucella neotomae 5K33] gi|261303975|gb|EEY07472.1| LSU ribosomal protein L28P [Brucella pinnipedialis M163/99/10] gi|261738936|gb|EEY26932.1| ribosomal protein L28 [Brucella sp. F5/99] gi|261740911|gb|EEY28837.1| LSU ribosomal protein L28P [Brucella suis bv. 5 str. 513] gi|261745474|gb|EEY33400.1| LSU ribosomal protein L28P [Brucella suis bv. 3 str. 686] gi|262551494|gb|EEZ07484.1| 50S ribosomal protein L28 [Brucella ceti M490/95/1] gi|262764756|gb|EEZ10677.1| 50S ribosomal protein L28 [Brucella melitensis bv. 3 str. Ether] gi|263003105|gb|EEZ15398.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. Rev.1] gi|263092961|gb|EEZ17122.1| 50S ribosomal protein L28 [Brucella melitensis bv. 2 str. 63/9] gi|264659764|gb|EEZ30025.1| 50S ribosomal protein L28 [Brucella pinnipedialis M292/94/1] gi|294819836|gb|EFG36835.1| large subunit ribosomal protein L28 [Brucella sp. NVSL 07-0026] gi|297174414|gb|EFH33761.1| large subunit ribosomal protein L28 [Brucella abortus bv. 5 str. B3196] gi|326410012|gb|ADZ67077.1| Ribosomal protein L28 [Brucella melitensis M28] gi|326539729|gb|ADZ87944.1| ribosomal protein L28 [Brucella melitensis M5-90] Length = 97 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 72/97 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+V GN VSHANN+TRRRFLPNLC +TLIS+ + Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKSVQYGNNVSHANNRTRRRFLPNLCNVTLISETLGQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL S + LS R R L+ QI KK +E ++ Sbjct: 61 HRGGLDAFLVKSDDKELSQRARLLKRQIAKKQAEAAA 97 >gi|159185825|ref|NP_356994.2| 50S ribosomal protein L28 [Agrobacterium tumefaciens str. C58] gi|332716407|ref|YP_004443873.1| 50S ribosomal protein L28 [Agrobacterium sp. H13-3] gi|22096068|sp|Q8U9V8|RL28_AGRT5 RecName: Full=50S ribosomal protein L28 gi|159140959|gb|AAK89779.2| 50S ribosomal protein L28 [Agrobacterium tumefaciens str. C58] gi|325063092|gb|ADY66782.1| 50S ribosomal protein L28 [Agrobacterium sp. H13-3] Length = 96 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 61/96 (63%), Positives = 74/96 (77%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V +GN VSHANNKT+RRFLPNLC++TLISD + Q+++LR+S ALRSVE Sbjct: 1 MSRVCELTGKGVQTGNNVSHANNKTKRRFLPNLCQVTLISDALGQRFRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL S + LS R R LR QI KK +E + Sbjct: 61 HRGGLDAFLLKSGENELSMRARLLRRQIAKKTAEAA 96 >gi|254718063|ref|ZP_05179874.1| 50S ribosomal protein L28 [Brucella sp. 83/13] gi|265983010|ref|ZP_06095745.1| LSU ribosomal protein L28P [Brucella sp. 83/13] gi|306837624|ref|ZP_07470495.1| ribosomal protein L28 [Brucella sp. NF 2653] gi|306842858|ref|ZP_07475496.1| ribosomal protein L28 [Brucella sp. BO2] gi|306843444|ref|ZP_07476045.1| ribosomal protein L28 [Brucella sp. BO1] gi|264661602|gb|EEZ31863.1| LSU ribosomal protein L28P [Brucella sp. 83/13] gi|306276135|gb|EFM57835.1| ribosomal protein L28 [Brucella sp. BO1] gi|306286980|gb|EFM58495.1| ribosomal protein L28 [Brucella sp. BO2] gi|306407331|gb|EFM63539.1| ribosomal protein L28 [Brucella sp. NF 2653] Length = 97 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 72/97 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+V GN VSHANNKTRRRFLPNLC +TLIS+ + Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKSVQYGNNVSHANNKTRRRFLPNLCNVTLISETLGQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL S + LS R R L+ QI KK +E ++ Sbjct: 61 HRGGLDAFLVKSDDKELSQRARLLKRQIAKKQAEAAA 97 >gi|75674604|ref|YP_317025.1| 50S ribosomal protein L28 [Nitrobacter winogradskyi Nb-255] gi|123614188|sp|Q3SVL8|RL28_NITWN RecName: Full=50S ribosomal protein L28 gi|74419474|gb|ABA03673.1| LSU ribosomal protein L28P [Nitrobacter winogradskyi Nb-255] Length = 97 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + G+KVSH+N KT+RRFLPNL +T +S+ + + R+S ALRSV+ Sbjct: 1 MSRRCELTAKAPLVGHKVSHSNIKTKRRFLPNLVNVTFVSETLSSSVRFRVSTHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GG D FL ++ LS + L+ QI KK + K+ Sbjct: 61 HRGGFDAFLLKARDSELSPKAIELKRQIQKKQAAKA 96 >gi|84514439|ref|ZP_01001803.1| ribosomal protein L28 [Loktanella vestfoldensis SKA53] gi|84511490|gb|EAQ07943.1| ribosomal protein L28 [Loktanella vestfoldensis SKA53] Length = 95 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 65/95 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K MSGN VSHA N TRRRFLPNL +TL SD++ + ++L+IS ALR+V+ Sbjct: 1 MSRRCELTGKGPMSGNNVSHAKNHTRRRFLPNLQDVTLQSDVLGRSFKLKISNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD F++ +K+ LS ++ +I K + Sbjct: 61 HRGGLDAFMAKAKEAELSPDALKIKKEIAKATAAA 95 >gi|240851331|ref|YP_002972734.1| 50S ribosomal protein L28 [Bartonella grahamii as4aup] gi|240268454|gb|ACS52042.1| 50S ribosomal protein L28 [Bartonella grahamii as4aup] Length = 105 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 61/95 (64%), Positives = 75/95 (78%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT KTV+ GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKTVLYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRISASALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL + + LS R R L+ QI+KK +E+ Sbjct: 61 HRGGLDAFLVKADDKELSQRARLLKRQIIKKKAEQ 95 >gi|86136561|ref|ZP_01055140.1| ribosomal protein L28 [Roseobacter sp. MED193] gi|85827435|gb|EAQ47631.1| ribosomal protein L28 [Roseobacter sp. MED193] Length = 96 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 48/96 (50%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA N+TRRRFLPNL +TL S+ + + +L+IS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLQSETLGRGIKLKISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K E LS ++ +I K S + Sbjct: 61 HRGGLDAFLAKAKDEELSTAALKVKKEIAKAQSAAA 96 >gi|148559224|ref|YP_001259829.1| 50S ribosomal protein L28 [Brucella ovis ATCC 25840] gi|166226549|sp|A5VSY2|RL28_BRUO2 RecName: Full=50S ribosomal protein L28 gi|148370481|gb|ABQ60460.1| 50S ribosomal protein L28 [Brucella ovis ATCC 25840] Length = 97 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 59/97 (60%), Positives = 71/97 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+V GN VSHANN+TR RFLPNLC +TLIS+ + Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKSVQYGNNVSHANNRTRCRFLPNLCNVTLISETLGQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL S + LS R R L+ QI KK +E ++ Sbjct: 61 HRGGLDAFLVKSDDKELSQRARLLKRQIAKKQAEAAA 97 >gi|114764005|ref|ZP_01443246.1| ribosomal protein L28 [Pelagibaca bermudensis HTCC2601] gi|114543597|gb|EAU46611.1| ribosomal protein L28 [Roseovarius sp. HTCC2601] Length = 96 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 50/96 (52%), Positives = 68/96 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+G+ VSHANNKT+RRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRVCELTGKGPMTGHNVSHANNKTKRRFLPNLNDVTLQSETLGRGVKLRISASALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD+FL +K LSA ++ +I K + ++ Sbjct: 61 HRGGLDKFLDKAKDAELSATALKVKKEIAKARAAQA 96 >gi|49474767|ref|YP_032809.1| 50S ribosomal protein L28 [Bartonella quintana str. Toulouse] gi|67461402|sp|Q6FYG6|RL28_BARQU RecName: Full=50S ribosomal protein L28 gi|49240271|emb|CAF26742.1| 50s ribosomal protein l28 [Bartonella quintana str. Toulouse] Length = 97 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 76/97 (78%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT KTV GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LR+S ALRSVE Sbjct: 1 MSRACELTGKTVQYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +E+++ Sbjct: 61 HRGGLDSFLVRADDKELSQRARLLKRQIVKKKAEQAA 97 >gi|227823244|ref|YP_002827216.1| 50S ribosomal protein L28 [Sinorhizobium fredii NGR234] gi|254801373|sp|C3MHW1|RL28_RHISN RecName: Full=50S ribosomal protein L28 gi|227342245|gb|ACP26463.1| 50S ribosomal protein L28 [Sinorhizobium fredii NGR234] Length = 96 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 58/96 (60%), Positives = 73/96 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SG+ VSHANNKT+R+FLPNLC +TLISD + Q+++LR+S ALRSVE Sbjct: 1 MSRSCELTGKGVQSGHNVSHANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK +E + Sbjct: 61 HRGGLDAFLLKADENELSMRARLLRRQIVKKAAEAA 96 >gi|149913435|ref|ZP_01901968.1| ribosomal protein L28 [Roseobacter sp. AzwK-3b] gi|149812555|gb|EDM72384.1| ribosomal protein L28 [Roseobacter sp. AzwK-3b] Length = 96 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 66/96 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K MSG SHANNKT+RR+LPNL +TL S+I+ + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMSGFNSSHANNKTKRRYLPNLQDVTLQSEILNRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K E LSA L+ +I K + + Sbjct: 61 HRGGLDAFLAKAKDEELSANALKLKKEISKAQAAAA 96 >gi|209551162|ref|YP_002283079.1| 50S ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226699153|sp|B5ZRX6|RL28_RHILW RecName: Full=50S ribosomal protein L28 gi|209536918|gb|ACI56853.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 99 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 61/96 (63%), Positives = 76/96 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V++GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALRSVE Sbjct: 1 MSRVCELTGKAVLTGNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK +E + Sbjct: 61 HRGGLDAFLLKASETELSMRARLLRRQIVKKTAEAA 96 >gi|190893654|ref|YP_001980196.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 652] gi|218458580|ref|ZP_03498671.1| 50S ribosomal protein L28 [Rhizobium etli Kim 5] gi|218510181|ref|ZP_03508059.1| 50S ribosomal protein L28 [Rhizobium etli Brasil 5] gi|218517127|ref|ZP_03513967.1| 50S ribosomal protein L28 [Rhizobium etli 8C-3] gi|226699152|sp|B3PPE3|RL28_RHIE6 RecName: Full=50S ribosomal protein L28 gi|190698933|gb|ACE93018.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 652] gi|327188703|gb|EGE55902.1| 50S ribosomal protein L28 [Rhizobium etli CNPAF512] Length = 99 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 61/96 (63%), Positives = 76/96 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V++GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALRSVE Sbjct: 1 MSRVCELTGKAVLTGNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK +E + Sbjct: 61 HRGGLDAFLLKASENELSMRARLLRRQIVKKTAEAA 96 >gi|15966421|ref|NP_386774.1| 50S ribosomal protein L28 [Sinorhizobium meliloti 1021] gi|307300541|ref|ZP_07580321.1| ribosomal protein L28 [Sinorhizobium meliloti BL225C] gi|307318406|ref|ZP_07597841.1| ribosomal protein L28 [Sinorhizobium meliloti AK83] gi|20139560|sp|Q92MF4|RL28_RHIME RecName: Full=50S ribosomal protein L28 gi|15075692|emb|CAC47247.1| Probable 50S ribosomal protein L28 [Sinorhizobium meliloti 1021] gi|306896088|gb|EFN26839.1| ribosomal protein L28 [Sinorhizobium meliloti AK83] gi|306904707|gb|EFN35291.1| ribosomal protein L28 [Sinorhizobium meliloti BL225C] Length = 96 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 59/96 (61%), Positives = 73/96 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SGN VSHANNKT+R+FLPNLC +TLISD + Q+++LR+S ALRSVE Sbjct: 1 MSRSCELTGKGVQSGNNVSHANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK +E + Sbjct: 61 HRGGLDAFLLKADENELSMRARLLRRQIVKKAAEAA 96 >gi|85713780|ref|ZP_01044770.1| ribosomal protein L28 [Nitrobacter sp. Nb-311A] gi|85699684|gb|EAQ37551.1| ribosomal protein L28 [Nitrobacter sp. Nb-311A] Length = 97 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + G++VSH+N KT+RRFLPNL +T +SD + + R+S ALRSV+ Sbjct: 1 MSRRCELTAKAPLVGHRVSHSNIKTKRRFLPNLVNVTFVSDTLASSVRFRVSTHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GG D FL +K LS + ++ QI KK + K+ Sbjct: 61 HRGGFDAFLLKAKDSELSPKAVEIKRQIQKKQAAKA 96 >gi|150397754|ref|YP_001328221.1| 50S ribosomal protein L28 [Sinorhizobium medicae WSM419] gi|166227338|sp|A6UCK6|RL28_SINMW RecName: Full=50S ribosomal protein L28 gi|150029269|gb|ABR61386.1| ribosomal protein L28 [Sinorhizobium medicae WSM419] Length = 96 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 59/96 (61%), Positives = 73/96 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SGN VSHANNKT+R+FLPNLC +TLISD + Q+++LR+S ALRSVE Sbjct: 1 MSRSCELTGKGVQSGNNVSHANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK +E + Sbjct: 61 HRGGLDAFLLKADETELSMRARLLRRQIVKKAAEAA 96 >gi|319409404|emb|CBI83050.1| 50S ribosomal protein L28 [Bartonella schoenbuchensis R1] Length = 97 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 75/97 (77%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKAVQYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRISAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +E+++ Sbjct: 61 HRGGLDCFLVKADDKELSQRARLLKRQIMKKKAEQAA 97 >gi|89069017|ref|ZP_01156398.1| ribosomal protein L28 [Oceanicola granulosus HTCC2516] gi|89045386|gb|EAR51451.1| ribosomal protein L28 [Oceanicola granulosus HTCC2516] Length = 93 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 64/93 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA+NKTRRRFLPNL +TL SD++ + ++ R+S ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAHNKTRRRFLPNLQDVTLQSDVLGRSFKFRVSSAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD F++ +K LSA ++ I + Sbjct: 61 HRGGLDAFMARAKDAELSAAALKVKKAIADANA 93 >gi|84687464|ref|ZP_01015341.1| ribosomal protein L28 [Maritimibacter alkaliphilus HTCC2654] gi|84664489|gb|EAQ10976.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2654] Length = 95 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 67/95 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K +GN VSHANNKT+RRFLPNL ++L+S+ + + + RIS ALR+V+ Sbjct: 1 MSRVCELTGKGPATGNNVSHANNKTKRRFLPNLNDVSLVSETLGRPIKFRISASALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD+FL+ +K LSA+ ++ +I K + Sbjct: 61 HRGGLDKFLAKAKDAELSAKALKVKKEIAKAQASA 95 >gi|49476246|ref|YP_034287.1| 50S ribosomal protein L28 [Bartonella henselae str. Houston-1] gi|67461407|sp|Q6G5T1|RL28_BARHE RecName: Full=50S ribosomal protein L28 gi|49239054|emb|CAF28355.1| 50S ribosomal protein l28 [Bartonella henselae str. Houston-1] Length = 97 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 76/97 (78%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT KTV GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LR+S ALRSVE Sbjct: 1 MSRACELTGKTVQYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +EK++ Sbjct: 61 HRGGLDGFLVKADDKELSQRARLLKRQIVKKKAEKAA 97 >gi|254511086|ref|ZP_05123153.1| ribosomal protein L28 [Rhodobacteraceae bacterium KLH11] gi|221534797|gb|EEE37785.1| ribosomal protein L28 [Rhodobacteraceae bacterium KLH11] Length = 95 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 49/95 (51%), Positives = 65/95 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA N+TRRRFLPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL+ +K + LSA ++ +I K + Sbjct: 61 HRGGLDAFLAKAKDDELSANALKVKKEIAKAQASA 95 >gi|86359399|ref|YP_471291.1| 50S ribosomal protein L28 [Rhizobium etli CFN 42] gi|123510611|sp|Q2K3M2|RL28_RHIEC RecName: Full=50S ribosomal protein L28 gi|86283501|gb|ABC92564.1| 50S ribosomal protein L28 [Rhizobium etli CFN 42] Length = 98 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 77/97 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V++GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALRSVE Sbjct: 1 MSRVCELTGKAVLTGNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R LR QI+KK +E ++ Sbjct: 61 HRGGLDAFLIKASENELSMRARLLRRQIVKKTAEAAA 97 >gi|296116557|ref|ZP_06835167.1| 50S ribosomal protein L28 [Gluconacetobacter hansenii ATCC 23769] gi|295976769|gb|EFG83537.1| 50S ribosomal protein L28 [Gluconacetobacter hansenii ATCC 23769] Length = 100 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNK+RRRFLPNL +L+SDI+ +LR+S +R+VE Sbjct: 1 MSRRCQITGKGVLTGNNVSHANNKSRRRFLPNLQETSLLSDILGAPVRLRLSTNGIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL ++ L+ T++ +IL+ K++ Sbjct: 61 HNGGLDAFLLSTPNRKLTPEAMTVKRRILRVQVRKAA 97 >gi|159045123|ref|YP_001533917.1| 50S ribosomal protein L28 [Dinoroseobacter shibae DFL 12] gi|189029438|sp|A8LHY2|RL28_DINSH RecName: Full=50S ribosomal protein L28 gi|157912883|gb|ABV94316.1| 50S ribosomal protein L28 [Dinoroseobacter shibae DFL 12] Length = 95 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 48/95 (50%), Positives = 65/95 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V GN VSHANNKT+RRFLPNL +TL+S+ + + ++LRIS ALR+V+ Sbjct: 1 MSRRCELTGKGVQVGNNVSHANNKTKRRFLPNLNDVTLMSETLGRGFKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL+ +K LS + ++ I K + Sbjct: 61 HRGGLDSFLAKAKDAELSEKALKIKKDIAKAQAAA 95 >gi|218682995|ref|ZP_03530596.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 894] Length = 98 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 77/97 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V++GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALRSVE Sbjct: 1 MSRVCELTGKAVLTGNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R LR QI+KK +E ++ Sbjct: 61 HRGGLDAFLIKASENELSMRARLLRRQIVKKNAEAAA 97 >gi|154252158|ref|YP_001412982.1| 50S ribosomal protein L28 [Parvibaculum lavamentivorans DS-1] gi|171769596|sp|A7HTU2|RL28_PARL1 RecName: Full=50S ribosomal protein L28 gi|154156108|gb|ABS63325.1| ribosomal protein L28 [Parvibaculum lavamentivorans DS-1] Length = 96 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 54/96 (56%), Positives = 67/96 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CEL+ K VMSGN VSHAN KTRRRFLPNLC++TLISD + +++ LR+S ALRSVE Sbjct: 1 MSRRCELSGKAVMSGNNVSHANRKTRRRFLPNLCQVTLISDALGRQFSLRVSAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 GGLD FL + LS+R L+ I K + + Sbjct: 61 HNGGLDPFLLKASDAQLSSRALKLKRAIEKVQAVAA 96 >gi|84499546|ref|ZP_00997834.1| ribosomal protein L28 [Oceanicola batsensis HTCC2597] gi|84392690|gb|EAQ04901.1| ribosomal protein L28 [Oceanicola batsensis HTCC2597] Length = 95 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 49/93 (52%), Positives = 66/93 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANNKTRRRFLPNL ++L S+ + + +LRIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNKTRRRFLPNLNDVSLRSEALGRNIKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD+FL+ +K LSA ++ +I K + Sbjct: 61 HRGGLDKFLAKAKDSELSANALKVKKEIAKVQA 93 >gi|149202032|ref|ZP_01879005.1| 50S ribosomal protein L28 [Roseovarius sp. TM1035] gi|149144130|gb|EDM32161.1| 50S ribosomal protein L28 [Roseovarius sp. TM1035] Length = 96 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M GN SHANNKTRRR+LPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMVGNNSSHANNKTRRRYLPNLNDVTLQSETLNRGIKLRISAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K + LSA ++ +I K + + Sbjct: 61 HRGGLDAFLAKAKDDELSASALKVKKEIAKAQAATA 96 >gi|254461018|ref|ZP_05074434.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2083] gi|206677607|gb|EDZ42094.1| ribosomal protein L28 [Rhodobacteraceae bacterium HTCC2083] Length = 95 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 63/95 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA N+TRRRFLPNL +TL S+I+ + +L+I ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLQSEILGRGIKLKICAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD+F + SK LS ++ +I K + Sbjct: 61 HRGGLDQFFAKSKDSELSDSALKVKKEIAKAQAAA 95 >gi|254440022|ref|ZP_05053516.1| ribosomal protein L28, putative [Octadecabacter antarcticus 307] gi|198255468|gb|EDY79782.1| ribosomal protein L28, putative [Octadecabacter antarcticus 307] Length = 96 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 64/96 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K MSGN VSHA N+TRRRFLPNL ++L+S+ + + ++ RIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMSGNNVSHAKNRTRRRFLPNLQDVSLMSESLGRSFKFRISNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD F + SK LS ++ I K + ++ Sbjct: 61 HRGGLDAFFAKSKDAELSPSALKVKKDIAKAATAEA 96 >gi|260575323|ref|ZP_05843323.1| ribosomal protein L28 [Rhodobacter sp. SW2] gi|259022583|gb|EEW25879.1| ribosomal protein L28 [Rhodobacter sp. SW2] Length = 94 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 53/94 (56%), Positives = 70/94 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCEL+ K MSGN VSHANNK+RRRFLPNL +TLISD++ Q ++LRIS ALRSV+ Sbjct: 1 MSRVCELSGKGPMSGNTVSHANNKSRRRFLPNLNEVTLISDVLGQSFKLRISAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 +GGLD FL+ +K + LS + ++ +I K + Sbjct: 61 HRGGLDAFLAKAKDDELSDKALKIKKEISKVQAA 94 >gi|85703478|ref|ZP_01034582.1| ribosomal protein L28 [Roseovarius sp. 217] gi|85672406|gb|EAQ27263.1| ribosomal protein L28 [Roseovarius sp. 217] Length = 96 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 49/93 (52%), Positives = 64/93 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M GN SHANNKTRRR+LPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMVGNNSSHANNKTRRRYLPNLNDVTLQSETLNRGIKLRISAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD FL+ +K + LSA ++ +I K + Sbjct: 61 HRGGLDAFLAKAKDDELSATALKVKKEIAKAQA 93 >gi|110635403|ref|YP_675611.1| 50S ribosomal protein L28 [Mesorhizobium sp. BNC1] gi|122965640|sp|Q11DS9|RL28_MESSB RecName: Full=50S ribosomal protein L28 gi|110286387|gb|ABG64446.1| LSU ribosomal protein L28P [Chelativorans sp. BNC1] Length = 98 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 60/95 (63%), Positives = 73/95 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K VMSGN VSHANNKTRRRFLPNLC +TL+S+ + Q Y+LR+S ALRSVE Sbjct: 1 MSRACELTGKAVMSGNNVSHANNKTRRRFLPNLCDVTLMSEALGQSYRLRVSANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL +K LS R R L+ Q+ KK++E+ Sbjct: 61 HRGGLDAFLLKAKSNELSQRARLLKKQVAKKLTEQ 95 >gi|126731524|ref|ZP_01747330.1| ribosomal protein L28 [Sagittula stellata E-37] gi|126708060|gb|EBA07120.1| ribosomal protein L28 [Sagittula stellata E-37] Length = 95 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 50/92 (54%), Positives = 65/92 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHANNKT+RR+LPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRVCELTGKGPMVGNNVSHANNKTKRRYLPNLNDVTLQSETLGRGVKLRISAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 +GGLD+FL+ +K LS R ++ +I K Sbjct: 61 HRGGLDKFLAKAKDTELSDRALKVKKEIAKAQ 92 >gi|163747248|ref|ZP_02154603.1| ribosomal protein L28 [Oceanibulbus indolifex HEL-45] gi|161379523|gb|EDQ03937.1| ribosomal protein L28 [Oceanibulbus indolifex HEL-45] Length = 99 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 65/93 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHANN+TRRRFLPNL ++L S+ + + ++LRIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHANNRTRRRFLPNLNDVSLQSEALGRAFKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD+FL+ +K LS ++ I K + Sbjct: 61 HRGGLDKFLAKAKDVELSDNALKIKKAIAKSSA 93 >gi|163852395|ref|YP_001640438.1| ribosomal protein L28 [Methylobacterium extorquens PA1] gi|218531154|ref|YP_002421970.1| 50S ribosomal protein L28 [Methylobacterium chloromethanicum CM4] gi|240139729|ref|YP_002964206.1| 50S ribosomal protein L28 [Methylobacterium extorquens AM1] gi|254562142|ref|YP_003069237.1| 50S ribosomal protein L28 [Methylobacterium extorquens DM4] gi|226732834|sp|A9W6T5|RL28_METEP RecName: Full=50S ribosomal protein L28 gi|254801367|sp|B7KT12|RL28_METC4 RecName: Full=50S ribosomal protein L28 gi|163664000|gb|ABY31367.1| ribosomal protein L28 [Methylobacterium extorquens PA1] gi|218523457|gb|ACK84042.1| ribosomal protein L28 [Methylobacterium chloromethanicum CM4] gi|240009703|gb|ACS40929.1| 50S ribosomal protein L28 [Methylobacterium extorquens AM1] gi|254269420|emb|CAX25386.1| 50S ribosomal protein L28 [Methylobacterium extorquens DM4] Length = 101 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 69/97 (71%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V G+ VSH+N KT+ RFLPNLC +TL SD + ++ +LR++ ALRSVE Sbjct: 1 MSRRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDTLNRRVRLRVTAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL +++ LS R L+ +I KK++E ++ Sbjct: 61 HRGGLDAFLVKAREIELSQTARLLKREIEKKIAEPAT 97 >gi|39933570|ref|NP_945846.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris CGA009] gi|192288924|ref|YP_001989529.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris TIE-1] gi|67461434|sp|Q6NCH9|RL28_RHOPA RecName: Full=50S ribosomal protein L28; AltName: Full=RRP-L28 gi|226699155|sp|B3QAG7|RL28_RHOPT RecName: Full=50S ribosomal protein L28 gi|39647416|emb|CAE25937.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris CGA009] gi|192282673|gb|ACE99053.1| ribosomal protein L28 [Rhodopseudomonas palustris TIE-1] Length = 101 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 45/93 (48%), Positives = 64/93 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNL +T +SD + + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGAQVGHKVSHSNIKTKRRFLPNLVNVTFLSDTLGRAVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD +L +++ LS + L+ I KKM+ Sbjct: 61 HRGGLDAYLLKAREAELSPKAVELKRAIAKKMA 93 >gi|83859714|ref|ZP_00953234.1| ribosomal protein L28 [Oceanicaulis alexandrii HTCC2633] gi|83852073|gb|EAP89927.1| ribosomal protein L28 [Oceanicaulis alexandrii HTCC2633] Length = 95 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT +SGN VSHANNKT+RRFLPNLC++TL S+ + + ++LRI+ ALRSV+ Sbjct: 1 MSRRCELTGTGPVSGNNVSHANNKTKRRFLPNLCQVTLASEALGRSFRLRIAAKALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 GGLD+FL ++ E LS ++ ++ K + Sbjct: 61 HVGGLDQFLLKARDEQLSGNALKIKRELKKAAAAA 95 >gi|103488227|ref|YP_617788.1| 50S ribosomal protein L28 [Sphingopyxis alaskensis RB2256] gi|123379514|sp|Q1GPG7|RL28_SPHAL RecName: Full=50S ribosomal protein L28 gi|98978304|gb|ABF54455.1| LSU ribosomal protein L28P [Sphingopyxis alaskensis RB2256] Length = 97 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 68/97 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+SD + + +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQIGHNVSHANNKTKRTFLPNLQNVTLLSDALGKSVKLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD +L + + LSA R L+ ++ KK++EK++ Sbjct: 61 HNGGLDNWLMKTGDDQLSANARKLKKEVAKKLAEKAA 97 >gi|119385160|ref|YP_916216.1| 50S ribosomal protein L28 [Paracoccus denitrificans PD1222] gi|166226595|sp|A1B4S6|RL28_PARDP RecName: Full=50S ribosomal protein L28 gi|119374927|gb|ABL70520.1| LSU ribosomal protein L28P [Paracoccus denitrificans PD1222] Length = 91 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 53/91 (58%), Positives = 67/91 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K MSGN VSHANNKTRRRFLPNL ++L+S+ + + YQLRIS ALRSV+ Sbjct: 1 MSRVCELTGKGPMSGNNVSHANNKTRRRFLPNLNEVSLLSEKLGRSYQLRISAAALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD FL+ +K LS R ++ ++ K Sbjct: 61 HRGGLDAFLAKAKDAELSDRALKIKRELAKA 91 >gi|114769311|ref|ZP_01446937.1| ribosomal protein L28 [alpha proteobacterium HTCC2255] gi|114550228|gb|EAU53109.1| ribosomal protein L28 [alpha proteobacterium HTCC2255] Length = 96 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA N+TRRRFLPNL +TL SD++ Q ++ +IS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLASDVLGQAFKFKISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD F++ +K LS + ++ I K + + Sbjct: 61 HRGGLDAFMAKAKDAELSEKALKVKRDIAKATAPAA 96 >gi|254451826|ref|ZP_05065263.1| ribosomal protein L28 [Octadecabacter antarcticus 238] gi|198266232|gb|EDY90502.1| ribosomal protein L28 [Octadecabacter antarcticus 238] Length = 96 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 47/96 (48%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K MSGN VSHA N+TRRRFLPNL ++L+SD + + ++ RIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMSGNNVSHAKNRTRRRFLPNLQDVSLMSDSLGRSFKFRISNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD F + SK LS ++ I+K + ++ Sbjct: 61 HRGGLDAFFAKSKDAELSPAALKVKKDIVKAATVEA 96 >gi|77462563|ref|YP_352067.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides 2.4.1] gi|126461497|ref|YP_001042611.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides ATCC 17029] gi|123592686|sp|Q3J4W8|RL28_RHOS4 RecName: Full=50S ribosomal protein L28 gi|166226609|sp|A3PHM3|RL28_RHOS1 RecName: Full=50S ribosomal protein L28 gi|77386981|gb|ABA78166.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides 2.4.1] gi|126103161|gb|ABN75839.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides ATCC 17029] Length = 96 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 52/96 (54%), Positives = 72/96 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCEL+ K M+GN VSHANNK+RRRFLPNL +TLISD++ Q ++LRIS ALR+V+ Sbjct: 1 MSRVCELSGKAPMTGNTVSHANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K + LS + R ++ +I K + + Sbjct: 61 HRGGLDAFLAKAKDDELSVKARAIKKEIEKAQATAA 96 >gi|296447501|ref|ZP_06889424.1| ribosomal protein L28 [Methylosinus trichosporium OB3b] gi|296254968|gb|EFH02072.1| ribosomal protein L28 [Methylosinus trichosporium OB3b] Length = 98 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 67/97 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V +GN VSH+N KTR RFLPNL +TL SD + + +LR+S ALRSVE Sbjct: 1 MSRRCELTGKGVQTGNLVSHSNRKTRTRFLPNLVNVTLASDALARSVRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL +++ LS R L+ +I KK++ +S Sbjct: 61 HRGGLDAFLLKARETELSDDARALKREIAKKLATAAS 97 >gi|319407804|emb|CBI81455.1| 50S ribosomal protein L28 [Bartonella sp. 1-1C] Length = 97 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 75/97 (77%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRVCELTGKAVQYGNNVSHANNKTRRRFLPNLCNVTLISELLQQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +EK + Sbjct: 61 HRGGLDNFLVKADDKELSQRGRLLKRQIMKKKAEKVA 97 >gi|222149976|ref|YP_002550933.1| 50S ribosomal protein L28 [Agrobacterium vitis S4] gi|254801494|sp|B9JTL3|RL28_AGRVS RecName: Full=50S ribosomal protein L28 gi|221736958|gb|ACM37921.1| 50S ribosomal protein L28 [Agrobacterium vitis S4] Length = 96 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 60/96 (62%), Positives = 72/96 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SGN VSHANNKTRR+FLPNLC +TLISD + Q+Y+LR+S ALRSVE Sbjct: 1 MSRSCELTGKGVQSGNNVSHANNKTRRKFLPNLCDVTLISDALGQRYRLRVSAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + + LS R R LR QI+KK + + Sbjct: 61 HRGGLDAFLLKANETELSMRARLLRRQIVKKTAVAA 96 >gi|319899448|ref|YP_004159545.1| 50S ribosomal protein L28 [Bartonella clarridgeiae 73] gi|319403416|emb|CBI76984.1| 50S ribosomal protein L28 [Bartonella clarridgeiae 73] Length = 97 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 74/97 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKAVQYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +E+ + Sbjct: 61 HRGGLDGFLVKADDKELSQRARLLKRQIIKKKAEQVA 97 >gi|118592089|ref|ZP_01549483.1| 50S ribosomal protein L28 [Stappia aggregata IAM 12614] gi|118435385|gb|EAV42032.1| 50S ribosomal protein L28 [Stappia aggregata IAM 12614] Length = 98 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 70/97 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CEL+ K VM+GN VSHANN++RRRFLPNLC ++LISD + + ++L++ ALRSVE Sbjct: 1 MARRCELSGKDVMTGNNVSHANNRSRRRFLPNLCNVSLISDTLGETFKLKVCAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD +L + +LS R ++ I +K +E ++ Sbjct: 61 HRGGLDAYLMKASDADLSDAARKIKVDIKRKQAEAAA 97 >gi|90420223|ref|ZP_01228131.1| 50S ribosomal protein L28 [Aurantimonas manganoxydans SI85-9A1] gi|90335557|gb|EAS49307.1| 50S ribosomal protein L28 [Aurantimonas manganoxydans SI85-9A1] Length = 98 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 75/97 (77%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SGN VSHANN+TRR+FLPNLC++TLISD M Q+Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKAVQSGNNVSHANNRTRRKFLPNLCQVTLISDAMGQRYRLRISAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ + LS R R L+ QI KK++E ++ Sbjct: 61 HRGGLDAFLAKADAAELSQRARLLKRQIAKKIAETAA 97 >gi|92116123|ref|YP_575852.1| 50S ribosomal protein L28 [Nitrobacter hamburgensis X14] gi|122418709|sp|Q1QQV5|RL28_NITHX RecName: Full=50S ribosomal protein L28 gi|91799017|gb|ABE61392.1| LSU ribosomal protein L28P [Nitrobacter hamburgensis X14] Length = 97 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 44/96 (45%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M G+KVSH+N KT+RRFLPNL +T +S+ + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKAPMVGHKVSHSNIKTKRRFLPNLVNVTFLSEALASPVRLRVSTHALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GG D FL +K LS + ++ +I KK + + Sbjct: 61 HRGGFDAFLLKAKNAELSPKAIEIKRRIEKKQAANA 96 >gi|188582402|ref|YP_001925847.1| 50S ribosomal protein L28 [Methylobacterium populi BJ001] gi|226732836|sp|B1ZHJ4|RL28_METPB RecName: Full=50S ribosomal protein L28 gi|179345900|gb|ACB81312.1| ribosomal protein L28 [Methylobacterium populi BJ001] Length = 101 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 68/97 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V G+ VSH+N KT+ RFLPNLC +TL SD + ++ +LR++ ALRSVE Sbjct: 1 MSRRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDALNRRVRLRVTAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL +++ LS R L+ I KK++E ++ Sbjct: 61 HRGGLDAFLIKAREIELSQTARLLKRDIEKKIAETAT 97 >gi|299132820|ref|ZP_07026015.1| ribosomal protein L28 [Afipia sp. 1NLS2] gi|298592957|gb|EFI53157.1| ribosomal protein L28 [Afipia sp. 1NLS2] Length = 97 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 64/97 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G++VSH+N KT+RRFLPNLC +TLIS+ + Q +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGPQVGHRVSHSNIKTKRRFLPNLCNVTLISETLGQSVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL + LS + L+ QI KK ++ Sbjct: 61 HNGGLDAFLLKANVATLSPKAADLKRQIEKKKLAAAN 97 >gi|58038593|ref|YP_190557.1| 50S ribosomal protein L28 [Gluconobacter oxydans 621H] gi|67461239|sp|Q5FUP5|RL28_GLUOX RecName: Full=50S ribosomal protein L28 gi|58001007|gb|AAW59901.1| LSU ribosomal protein L28P [Gluconobacter oxydans 621H] Length = 100 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 64/97 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNK+RRRFLPNL TLISDI+ ++R+S +R+VE Sbjct: 1 MSRRCQITGKGVLTGNNVSHANNKSRRRFLPNLQETTLISDILGASVRMRLSTDGIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL + L + ++ +IL+ K++ Sbjct: 61 HNGGLDSFLLGTPNRKLPTEAQVIKRRILRVQERKAA 97 >gi|91974765|ref|YP_567424.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisB5] gi|123722228|sp|Q13EG6|RL28_RHOPS RecName: Full=50S ribosomal protein L28 gi|91681221|gb|ABE37523.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisB5] Length = 101 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V +G+KVSH+N KT+RRFLPNL +T +SD + + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGVQTGHKVSHSNIKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ + LS + L+ I KK + + + Sbjct: 61 HRGGLDAFLAKASIAELSPKAAELKRAIAKKKAGEPA 97 >gi|148555241|ref|YP_001262823.1| 50S ribosomal protein L28 [Sphingomonas wittichii RW1] gi|166228155|sp|A5V8R9|RL28_SPHWW RecName: Full=50S ribosomal protein L28 gi|148500431|gb|ABQ68685.1| LSU ribosomal protein L28P [Sphingomonas wittichii RW1] Length = 97 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 63/97 (64%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TLISD + + +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRTFLPNLQNVTLISDSLGKGVKLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD +L + + LS R R L+ I KK ++ Sbjct: 61 HVGGLDNWLLKTSDDLLSLRARRLKRDIAKKQQAVAA 97 >gi|170750100|ref|YP_001756360.1| ribosomal protein L28 [Methylobacterium radiotolerans JCM 2831] gi|226732837|sp|B1LW27|RL28_METRJ RecName: Full=50S ribosomal protein L28 gi|170656622|gb|ACB25677.1| ribosomal protein L28 [Methylobacterium radiotolerans JCM 2831] Length = 100 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 68/97 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K V G+ VSH+N KT+ RFLPNLC +TL SD + ++ +LR++ ALRSVE Sbjct: 1 MARRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDALGKRVRLRVTAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + +LS R L+ +I KK++E + Sbjct: 61 HRGGLDAFLIKAGEGDLSQTARLLKREIHKKLAETPA 97 >gi|83949729|ref|ZP_00958462.1| ribosomal protein L28 [Roseovarius nubinhibens ISM] gi|83837628|gb|EAP76924.1| ribosomal protein L28 [Roseovarius nubinhibens ISM] Length = 96 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/96 (50%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M GN SHANNKTRRR+LPNL +TL S+ + + +LRIS ALRSV+ Sbjct: 1 MSRRCELTGKGPMVGNNSSHANNKTRRRYLPNLNDVTLQSETLSRGIKLRISAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ +K LS ++ +I K + + Sbjct: 61 HRGGLDAFLAKAKDSELSTTALKVKKEIAKAQAANA 96 >gi|255263970|ref|ZP_05343312.1| 50S ribosomal protein L28 [Thalassiobium sp. R2A62] gi|255106305|gb|EET48979.1| 50S ribosomal protein L28 [Thalassiobium sp. R2A62] Length = 93 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 46/93 (49%), Positives = 62/93 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K M+GN VSHA N+TRRRFLPNL +TL S+ + + ++ RIS ALR+V+ Sbjct: 1 MSRRCELTGKGPMTGNNVSHAKNRTRRRFLPNLQDVTLASETLGRSFKFRISNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD F + SK LS ++ +I K + Sbjct: 61 HRGGLDGFFAKSKDVELSDAALKVKKEIAKAQA 93 >gi|121602432|ref|YP_988415.1| 50S ribosomal protein L28 [Bartonella bacilliformis KC583] gi|166226544|sp|A1UR12|RL28_BARBK RecName: Full=50S ribosomal protein L28 gi|120614609|gb|ABM45210.1| ribosomal protein L28 [Bartonella bacilliformis KC583] Length = 98 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 77/97 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT KTV GN VSHANNKTRRRFLPNLC +TLIS++M+Q Y+LRIS A+RSVE Sbjct: 1 MSRACELTGKTVQYGNNVSHANNKTRRRFLPNLCNVTLISEVMQQSYRLRISANAVRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ + + LS R R L+ QI+KK +E+++ Sbjct: 61 HRGGLDNFLTKADDKELSQRARLLKRQIVKKKAEQAA 97 >gi|241760862|ref|ZP_04758951.1| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753168|ref|YP_003226061.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856227|ref|YP_162029.2| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4] gi|48474640|sp|Q9FDL9|RL28_ZYMMO RecName: Full=50S ribosomal protein L28 gi|9931340|gb|AAG02150.1|AF212041_6 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374481|gb|EER63942.1| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552531|gb|ACV75477.1| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775222|gb|AAV88918.2| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4] Length = 95 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 48/95 (50%), Positives = 63/95 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K GN VSHANN+T+R FLPNL +TLISD + + LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGNNVSHANNRTKRTFLPNLQNVTLISDALGKGVTLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 GGLD +L +K E LS R ++ ++ KK++ Sbjct: 61 HVGGLDNWLLKTKNEKLSTRALKVKREVAKKLAAA 95 >gi|146279144|ref|YP_001169303.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides ATCC 17025] gi|166226610|sp|A4WX84|RL28_RHOS5 RecName: Full=50S ribosomal protein L28 gi|145557385|gb|ABP71998.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides ATCC 17025] Length = 96 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 71/96 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCEL+ K M+GN VSHANNK+RRRFLPNL +TLISD++ Q ++LRIS ALR+V+ Sbjct: 1 MSRVCELSGKAPMTGNTVSHANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ ++ E LS + ++ +I K + + Sbjct: 61 HRGGLDAFLAKARDEELSLKALAIKKEIEKVRATAA 96 >gi|163734100|ref|ZP_02141541.1| ribosomal protein L28 [Roseobacter litoralis Och 149] gi|161392636|gb|EDQ16964.1| ribosomal protein L28 [Roseobacter litoralis Och 149] Length = 99 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 49/91 (53%), Positives = 65/91 (71%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+GN VSHANNKTRRRFLPNL +TL S+ + + ++ RIS ALR+V+ Sbjct: 1 MSRVCELTGKGPMTGNNVSHANNKTRRRFLPNLNDVTLQSETLGRAFKFRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD+F+ +K +LSA ++ I K Sbjct: 61 HRGGLDKFMEKAKDSDLSANALKVKKAIGKA 91 >gi|163869259|ref|YP_001610515.1| 50S ribosomal protein L28 [Bartonella tribocorum CIP 105476] gi|161018962|emb|CAK02520.1| 50S ribosomal protein L28 [Bartonella tribocorum CIP 105476] Length = 105 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 76/97 (78%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT KTV+ GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKTVLYGNNVSHANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL + + LS R R L+ QI+KK +E+ + Sbjct: 61 HRGGLDGFLVKADDKELSQRARLLKRQIVKKKAEQEN 97 >gi|144898657|emb|CAM75521.1| 50S ribosomal protein L28 [Magnetospirillum gryphiswaldense MSR-1] Length = 100 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 63/97 (64%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C +T K V++GN VSHANNK+RRRFLPNL +++SD + Q +L++S L+++E Sbjct: 1 MARRCSITGKGVLTGNNVSHANNKSRRRFLPNLQETSVLSDALGQMVRLKVSTRGLKTIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL + L R L+ ++ K ++ K + Sbjct: 61 HNGGLDAFLLGTNDSRLPDEARRLKKRVAKALATKQA 97 >gi|330994027|ref|ZP_08317957.1| 50S ribosomal protein L28 [Gluconacetobacter sp. SXCC-1] gi|329758973|gb|EGG75487.1| 50S ribosomal protein L28 [Gluconacetobacter sp. SXCC-1] Length = 99 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNK+RRRFLPNL +L+SDI+ +R++ +R+VE Sbjct: 1 MSRRCQITGKGVLTGNNVSHANNKSRRRFLPNLQETSLLSDILGAAVPMRMTTNGIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL ++ L+ T++ +IL+ +K++ Sbjct: 61 HNGGLDSFLLSTPNRKLTPEALTVKRRILRVQEKKAA 97 >gi|209883222|ref|YP_002287079.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5] gi|226732842|sp|B6J9Z3|RL28_OLICO RecName: Full=50S ribosomal protein L28 gi|209871418|gb|ACI91214.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5] Length = 97 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 65/97 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N K++RRFLPNLC +TL+S+ + Q +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKSKRRFLPNLCNVTLMSETLGQSVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD FL + NLS + L+ QI KK +S Sbjct: 61 HNGGLDAFLLKANIANLSPKAADLKRQIEKKKLAAAS 97 >gi|297183663|gb|ADI19788.1| ribosomal protein l28 [uncultured alpha proteobacterium EB000_37G09] Length = 116 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 64/94 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++T K VMSGN VSHA N+TRRRFLPNL + ++ S+I+ + +R+S A+R+VE Sbjct: 23 MSKRCQITGKGVMSGNNVSHAKNRTRRRFLPNLQQTSMSSEILGRTISMRVSTSAIRTVE 82 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GGLD FL ++ L+ R L+ +IL S Sbjct: 83 KHGGLDTFLLQARNSELADEARALKREILAVASA 116 >gi|328541960|ref|YP_004302069.1| 50S ribosomal protein L28 [polymorphum gilvum SL003B-26A1] gi|326411710|gb|ADZ68773.1| 50S ribosomal protein L28 [Polymorphum gilvum SL003B-26A1] Length = 96 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 53/96 (55%), Positives = 72/96 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K VMSGN VSHANNKTRRRFLPNLC ++LISD + + Y+LRIS ALRSVE Sbjct: 1 MARRCELTGKDVMSGNNVSHANNKTRRRFLPNLCNVSLISDALGETYKLRISAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + LS + R +++++ ++ ++ + Sbjct: 61 HRGGLDAFLLKASDTELSNKARLIKAEVKRRQADAA 96 >gi|294678645|ref|YP_003579260.1| 50S ribosomal protein L28 [Rhodobacter capsulatus SB 1003] gi|294477465|gb|ADE86853.1| 50S ribosomal protein L28 [Rhodobacter capsulatus SB 1003] Length = 95 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 50/80 (62%), Positives = 62/80 (77%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K MSGN +SHANNKTRRRFLPNL +TLISD++ Q +QLR+S LR+V+ Sbjct: 1 MSRVCELTGKGPMSGNNISHANNKTRRRFLPNLNEVTLISDVLGQSFQLRVSAAGLRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSAR 80 +GGLD FL+ + + LSA Sbjct: 61 HRGGLDAFLAKASDDELSAN 80 >gi|294085472|ref|YP_003552232.1| 50S ribosomal protein L28P [Candidatus Puniceispirillum marinum IMCC1322] gi|292665047|gb|ADE40148.1| LSU ribosomal protein L28P [Candidatus Puniceispirillum marinum IMCC1322] Length = 95 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 70/94 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C++T KTVM+GN VSHANN+TRRRFLPNL + ++ S+I+++K LRIS A+R+VE Sbjct: 1 MAKRCQITGKTVMAGNNVSHANNRTRRRFLPNLQQASMQSEILDRKISLRISTSAIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GG+D FL ++ L+ R+L+ +++ ++ Sbjct: 61 KHGGIDAFLMQARNSELADEARSLKREMMAVQAK 94 >gi|162148837|ref|YP_001603298.1| 50S ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5] gi|209545415|ref|YP_002277644.1| 50S ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5] gi|189029443|sp|A9HS05|RL28_GLUDA RecName: Full=50S ribosomal protein L28 gi|161787414|emb|CAP57009.1| putative 50S ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5] gi|209533092|gb|ACI53029.1| ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5] Length = 100 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNK+RRRFLPNL +L+SDI+ +LR+S +R+VE Sbjct: 1 MSRRCQITGKGVLTGNNVSHANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 GGLD FL ++ L + L+ +IL+ +K+ Sbjct: 61 HNGGLDAFLLSTPNRKLPTEAQALKRRILRAKEKKA 96 >gi|170741827|ref|YP_001770482.1| 50S ribosomal protein L28 [Methylobacterium sp. 4-46] gi|226732838|sp|B0UCJ9|RL28_METS4 RecName: Full=50S ribosomal protein L28 gi|168196101|gb|ACA18048.1| ribosomal protein L28 [Methylobacterium sp. 4-46] Length = 96 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 71/96 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V++G+ VSH+N KT+RRFLPNLC +TL+SD + + +LRIS ALRSVE Sbjct: 1 MSRRCELTGKAVLTGHLVSHSNRKTKRRFLPNLCNVTLLSDTLGRSVRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + +++LS R L+ +I KK++ + Sbjct: 61 HRGGLDAFLVKAGEQDLSQNARLLKREIEKKLAAAA 96 >gi|307942521|ref|ZP_07657869.1| 50S ribosomal protein L28 [Roseibium sp. TrichSKD4] gi|307774160|gb|EFO33373.1| 50S ribosomal protein L28 [Roseibium sp. TrichSKD4] Length = 129 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 71/97 (73%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CEL+ K VM+GN VSHANNK+RRRFLPNLC ++L+SD + + ++LRIS ALRSVE Sbjct: 32 MARRCELSGKDVMTGNNVSHANNKSRRRFLPNLCNVSLLSDTLGETFKLRISAHALRSVE 91 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD +L + LS + R ++ I +K +E ++ Sbjct: 92 HRGGLDNYLMKATDAQLSDKARQVKVAIKRKQAEAAA 128 >gi|90422067|ref|YP_530437.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisB18] gi|122477466|sp|Q21BW8|RL28_RHOPB RecName: Full=50S ribosomal protein L28 gi|90104081|gb|ABD86118.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisB18] Length = 101 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 46/92 (50%), Positives = 62/92 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNL +T +SD + + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGAQVGHKVSHSNIKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 +GGLD FL +K LS + ++ QI KK Sbjct: 61 HRGGLDGFLLKAKDAELSPKAVDIKRQIQKKK 92 >gi|326385791|ref|ZP_08207420.1| ribosomal protein L28 [Novosphingobium nitrogenifigens DSM 19370] gi|326209770|gb|EGD60558.1| ribosomal protein L28 [Novosphingobium nitrogenifigens DSM 19370] Length = 95 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 63/95 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQIGHNVSHANNKTKRVFLPNLQNVTLLSEKLDRSFRFRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 GGLD +L ++ LS R ++ ++ K ++ Sbjct: 61 HNGGLDNWLLKARDTELSTRALKVKRELKKAVAAA 95 >gi|241206565|ref|YP_002977661.1| 50S ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860455|gb|ACS58122.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 98 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 57/88 (64%), Positives = 70/88 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K V++GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALR+VE Sbjct: 1 MSRVCELTGKAVLTGNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD FL + + LS R R LR QI Sbjct: 61 HRGGLDAFLLKASENELSMRARLLRRQI 88 >gi|220924387|ref|YP_002499689.1| 50S ribosomal protein L28 [Methylobacterium nodulans ORS 2060] gi|254801368|sp|B8ICZ4|RL28_METNO RecName: Full=50S ribosomal protein L28 gi|219948994|gb|ACL59386.1| ribosomal protein L28 [Methylobacterium nodulans ORS 2060] Length = 96 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 52/96 (54%), Positives = 72/96 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V++G+ VSH+N KT+RRFLPNLC++TL+SD + + +LRIS ALRSVE Sbjct: 1 MSRRCELTGKAVLTGHLVSHSNRKTKRRFLPNLCKVTLLSDTLGRSVRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + ++ LS R L+ +I KK++E + Sbjct: 61 HRGGLDAFLVKAGEQELSQNARLLKREIEKKLAEAA 96 >gi|148258718|ref|YP_001243303.1| 50S ribosomal protein L28 [Bradyrhizobium sp. BTAi1] gi|166226547|sp|A5ETA3|RL28_BRASB RecName: Full=50S ribosomal protein L28 gi|146410891|gb|ABQ39397.1| LSU ribosomal protein L28P [Bradyrhizobium sp. BTAi1] Length = 102 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 43/86 (50%), Positives = 57/86 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNLC +T ISD + + +LR+S A++SV+ Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRS 86 GGLD +L + LS R L+ Sbjct: 61 HNGGLDAYLLKANAATLSPRALELKR 86 >gi|296532524|ref|ZP_06895238.1| 50S ribosomal protein L28 [Roseomonas cervicalis ATCC 49957] gi|296267150|gb|EFH13061.1| 50S ribosomal protein L28 [Roseomonas cervicalis ATCC 49957] Length = 103 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 55/88 (62%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C +T K V++GN VSHANNKTRRRFLPNL + SD++ Q+R+S +R+VE Sbjct: 1 MARRCGITGKGVLTGNNVSHANNKTRRRFLPNLQETSFFSDVLGTSVQIRLSTNGIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 GGLD FL + L L+ +I Sbjct: 61 HNGGLDSFLLGTPDRKLPTEALVLKRRI 88 >gi|83943974|ref|ZP_00956431.1| ribosomal protein L28 [Sulfitobacter sp. EE-36] gi|83954547|ref|ZP_00963258.1| ribosomal protein L28 [Sulfitobacter sp. NAS-14.1] gi|83840831|gb|EAP80002.1| ribosomal protein L28 [Sulfitobacter sp. NAS-14.1] gi|83845221|gb|EAP83101.1| ribosomal protein L28 [Sulfitobacter sp. EE-36] Length = 99 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 65/97 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+GN VSHA N+TRRRFLPNL +TL S+ + + ++ RIS ALR+V+ Sbjct: 1 MSRVCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLQSEALGRGFKFRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD+F++ +K LS ++ I K + + Sbjct: 61 HRGGLDKFMAKAKDTELSVNALKVKKAIAKSSATAEA 97 >gi|316931526|ref|YP_004106508.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris DX-1] gi|315599240|gb|ADU41775.1| ribosomal protein L28 [Rhodopseudomonas palustris DX-1] Length = 101 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 42/88 (47%), Positives = 57/88 (64%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNL +T SD + + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGAQVGHKVSHSNIKTKRRFLPNLVNVTFQSDTLGRSVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD +L + LS + L+ I Sbjct: 61 HRGGLDAYLLKASDAELSPKAVELKRAI 88 >gi|258542744|ref|YP_003188177.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-01] gi|329114656|ref|ZP_08243415.1| 50S ribosomal protein L28 [Acetobacter pomorum DM001] gi|256633822|dbj|BAH99797.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-01] gi|256636881|dbj|BAI02850.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-03] gi|256639934|dbj|BAI05896.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-07] gi|256642990|dbj|BAI08945.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-22] gi|256646045|dbj|BAI11993.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-26] gi|256649098|dbj|BAI15039.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-32] gi|256652085|dbj|BAI18019.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655142|dbj|BAI21069.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-12] gi|326696136|gb|EGE47818.1| 50S ribosomal protein L28 [Acetobacter pomorum DM001] Length = 101 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 61/90 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K V++GN VSHANNK+RRRFLPNL +L+S+ + ++R+S LR++E Sbjct: 1 MSRRCQITGKGVLTGNNVSHANNKSRRRFLPNLQDASLVSETLGSAVRMRVSARGLRTIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILK 90 GGLD FL ++ L + ++ ++L+ Sbjct: 61 HNGGLDAFLLSTPNRKLPEEAQVIKRRVLR 90 >gi|289609991|emb|CBI60347.1| unnamed protein product [Sordaria macrospora] Length = 97 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 45/87 (51%), Positives = 61/87 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+S+ +E+ +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRTFLPNLQNVTLMSEALERSIRLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQ 87 GGLD +L ++ ++LS R R L+ Sbjct: 61 HVGGLDNWLLKTRDDDLSLRARRLKRD 87 >gi|222087370|ref|YP_002545907.1| ribosomal protein L28 [Agrobacterium radiobacter K84] gi|254801493|sp|B9JBS8|RL28_AGRRK RecName: Full=50S ribosomal protein L28 gi|221724818|gb|ACM27974.1| ribosomal protein L28 [Agrobacterium radiobacter K84] Length = 101 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 58/91 (63%), Positives = 72/91 (79%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K V+ GN VSHANNKT+RRFLPNLC++TLISD++ Q+Y+LR+S LRSVE Sbjct: 1 MSRMCELTGKAVLVGNNVSHANNKTKRRFLPNLCQVTLISDVLGQRYRLRVSAAGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD FL + + LS R R LR QI+KK Sbjct: 61 HRGGLDAFLLKASENELSQRARLLRRQIIKK 91 >gi|323137532|ref|ZP_08072609.1| ribosomal protein L28 [Methylocystis sp. ATCC 49242] gi|322397158|gb|EFX99682.1| ribosomal protein L28 [Methylocystis sp. ATCC 49242] Length = 97 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V +GN VSH+N KTR RFLPNL +TL S+ + + +LRIS ALRSVE Sbjct: 1 MSRRCELTGKGVQTGNLVSHSNRKTRTRFLPNLVNVTLASEALARSVRLRISAAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL ++ E LS R L+ +I KK S ++ Sbjct: 61 HRGGLDAFLVKARDEELSQNARVLKREIEKKQSAATA 97 >gi|13473066|ref|NP_104633.1| 50S ribosomal protein L28 [Mesorhizobium loti MAFF303099] gi|260466651|ref|ZP_05812838.1| ribosomal protein L28 [Mesorhizobium opportunistum WSM2075] gi|20139637|sp|Q98FZ7|RL28_RHILO RecName: Full=50S ribosomal protein L28 gi|14023814|dbj|BAB50419.1| 50S ribosomal protein L28 [Mesorhizobium loti MAFF303099] gi|259029514|gb|EEW30803.1| ribosomal protein L28 [Mesorhizobium opportunistum WSM2075] Length = 98 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 72/97 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V +GN VSHANNKT+RRFLPNL +TLIS+ + Q +LRIS ALRSVE Sbjct: 1 MSRTCELTAKAVQTGNNVSHANNKTKRRFLPNLVNVTLISEALNQNVRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ + + LS R R L+ QI KK++E+ + Sbjct: 61 HRGGLDAFLAKADVKELSQRARLLKKQIAKKLAEQVA 97 >gi|163796313|ref|ZP_02190274.1| LSU ribosomal protein L28P [alpha proteobacterium BAL199] gi|159178455|gb|EDP62997.1| LSU ribosomal protein L28P [alpha proteobacterium BAL199] Length = 99 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 46/92 (50%), Positives = 64/92 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K V++GN VSHANN+TRRRFLPN+ L+SD++ Q +L++ A+R+VE Sbjct: 1 MARRCELTGKGVLTGNNVSHANNRTRRRFLPNIQETALLSDVLGQMVRLKLCTGAIRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 GGLD FL+ +K +LS R L+ +I K Sbjct: 61 HNGGLDAFLAKAKVSDLSQEARRLKKRIEKVQ 92 >gi|319781255|ref|YP_004140731.1| ribosomal protein L28 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167143|gb|ADV10681.1| ribosomal protein L28 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 98 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 59/97 (60%), Positives = 73/97 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K VMSGN VSHANNKT+RRFLPNL +TLIS+ + Q +LRIS ALRSVE Sbjct: 1 MSRTCELTAKAVMSGNNVSHANNKTKRRFLPNLVNVTLISEALNQNVRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ + + LS R R L+ QI KK +E+++ Sbjct: 61 HRGGLDAFLAKADVKELSQRARLLKKQIAKKTAEQAA 97 >gi|304321693|ref|YP_003855336.1| 50S ribosomal protein L28 [Parvularcula bermudensis HTCC2503] gi|303300595|gb|ADM10194.1| ribosomal protein L28 [Parvularcula bermudensis HTCC2503] Length = 94 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 49/94 (52%), Positives = 67/94 (71%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCE T K ++G+ VSHANNKT+RRF PNLC++TL S+ + ++++ RI+ ALRSV+ Sbjct: 1 MSRVCEFTGKRPITGHNVSHANNKTKRRFEPNLCKVTLESERLSRRFKFRITAHALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 GGLD FL +K E LS R R L+ +I+ S Sbjct: 61 HVGGLDAFLLKAKDERLSDRARRLKREIVAAASA 94 >gi|115522159|ref|YP_779070.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisA53] gi|122298122|sp|Q07VE4|RL28_RHOP5 RecName: Full=50S ribosomal protein L28 gi|115516106|gb|ABJ04090.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisA53] Length = 101 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 48/92 (52%), Positives = 63/92 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNL IT ISD + ++ +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGAQVGHKVSHSNIKTKRRFLPNLVNITFISDALGRQVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 +GGLD FL +K LS + ++ QI KK Sbjct: 61 HRGGLDGFLLKAKDAELSPKAVDIKRQIEKKK 92 >gi|126725204|ref|ZP_01741047.1| 50S ribosomal protein L28 [Rhodobacterales bacterium HTCC2150] gi|126706368|gb|EBA05458.1| 50S ribosomal protein L28 [Rhodobacterales bacterium HTCC2150] Length = 99 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 52/88 (59%), Positives = 62/88 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K MSGN VSHA N+TRRRFLPNL ITL SD Q YQLRIS ALR+V+ Sbjct: 4 MSRVCELTGKGPMSGNNVSHAKNRTRRRFLPNLNAITLQSDATGQSYQLRISAAALRTVD 63 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD F++ +K LS + ++ I Sbjct: 64 HRGGLDAFMAKAKDTELSTKALKIKKDI 91 >gi|163759938|ref|ZP_02167022.1| 50S ribosomal protein L28 [Hoeflea phototrophica DFL-43] gi|162282896|gb|EDQ33183.1| 50S ribosomal protein L28 [Hoeflea phototrophica DFL-43] Length = 98 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 73/97 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V SGN VSHANN+TRRRFLPNLC +TLISD M Q+Y+LRIS ALR+VE Sbjct: 1 MSRSCELTGKAVQSGNNVSHANNRTRRRFLPNLCNVTLISDAMGQRYRLRISANALRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL+ +K LS R R L+ QI KK+ E + Sbjct: 61 HRGGLDAFLAKAKDGELSMRARLLKRQIAKKLEENKA 97 >gi|332185549|ref|ZP_08387297.1| ribosomal protein L28 [Sphingomonas sp. S17] gi|332014527|gb|EGI56584.1| ribosomal protein L28 [Sphingomonas sp. S17] Length = 102 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 50/92 (54%), Positives = 64/92 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K GN VSHANNKT+R FLPNL +TLISD +E+ +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGNNVSHANNKTKRTFLPNLQNVTLISDALEKSVRLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 GGLD +L + + LS R R L+ ++KK+ Sbjct: 61 HNGGLDNWLVKTSDDQLSLRARRLKRDVVKKL 92 >gi|254486876|ref|ZP_05100081.1| ribosomal protein L28 [Roseobacter sp. GAI101] gi|214043745|gb|EEB84383.1| ribosomal protein L28 [Roseobacter sp. GAI101] Length = 100 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 46/91 (50%), Positives = 63/91 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M+GN VSHA N+TRRRFLPNL +TL S+ + + ++ RIS ALR+V+ Sbjct: 1 MSRVCELTGKGPMTGNNVSHAKNRTRRRFLPNLNDVTLQSESLGRSFKFRISAAALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD+F++ +K LS ++ I K Sbjct: 61 HRGGLDKFMAKAKDTELSGNALKVKKAIAKS 91 >gi|146337760|ref|YP_001202808.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS278] gi|166226548|sp|A4YKZ2|RL28_BRASO RecName: Full=50S ribosomal protein L28 gi|146190566|emb|CAL74568.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS278] Length = 102 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 43/86 (50%), Positives = 57/86 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K G+KVSH+N KT+RRFLPNLC +T ISD + + +LR+S A++SV+ Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRS 86 GGLD +L + LS R L+ Sbjct: 61 HNGGLDAYLMKANAAALSPRALELKR 86 >gi|254472185|ref|ZP_05085585.1| ribosomal protein L28 [Pseudovibrio sp. JE062] gi|211958468|gb|EEA93668.1| ribosomal protein L28 [Pseudovibrio sp. JE062] Length = 95 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 53/95 (55%), Positives = 71/95 (74%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K VM+GN VSHANNK+RRRFLPNLC ++L+SD + + Y+LRIS ALRSVE Sbjct: 1 MARRCELTGKDVMTGNNVSHANNKSRRRFLPNLCNVSLMSDTLGETYKLRISAHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL + + LS + R LR++I ++ + Sbjct: 61 HRGGLDAFLMKAAEAELSPKARLLRTEIKRRQAAA 95 >gi|27375273|ref|NP_766802.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 110] gi|67461519|sp|Q89XZ3|RL28_BRAJA RecName: Full=50S ribosomal protein L28 gi|27348409|dbj|BAC45427.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 110] Length = 102 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 64/96 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + G+KVSH+N KT+RRFLPNL +T IS+ +E+ +LR+S A++SV+ Sbjct: 1 MSRRCELTAKGPLVGHKVSHSNIKTKRRFLPNLVNVTFISEALERNVRLRVSTNAVKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 GGLD FL + + LS R L+ I KK+ + Sbjct: 61 HNGGLDAFLLKASADALSPRALELKRAIQKKVGVTA 96 >gi|288957262|ref|YP_003447603.1| large subunit ribosomal protein L28 [Azospirillum sp. B510] gi|288909570|dbj|BAI71059.1| large subunit ribosomal protein L28 [Azospirillum sp. B510] Length = 99 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 62/97 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C +T K GN VSHANNK RRRF PNL +L+SD + Q +LR+S A+RS+E Sbjct: 1 MARRCSVTGKGTQFGNNVSHANNKNRRRFQPNLQETSLLSDSLGQLVRLRLSVNAIRSIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL ++K LS R ++ +I K ++ + Sbjct: 61 HKGGLDAFLLDAKDAVLSLDARRIKRRISKAQEKQQA 97 >gi|23016453|ref|ZP_00056209.1| COG0227: Ribosomal protein L28 [Magnetospirillum magnetotacticum MS-1] Length = 101 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 63/96 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C +T K V++GN VSHANNKTRRRFLPNL +L+SD + +LRIS L+++E Sbjct: 1 MARRCAITGKGVLTGNNVSHANNKTRRRFLPNLQEASLLSDALGHAVRLRISTNGLKTIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 GG+D FL + LSA R L+ +I + ++ K Sbjct: 61 HNGGIDSFLLSVATTKLSAEARRLKKRIERALASKQ 96 >gi|85709871|ref|ZP_01040936.1| ribosomal protein L28 [Erythrobacter sp. NAP1] gi|85688581|gb|EAQ28585.1| ribosomal protein L28 [Erythrobacter sp. NAP1] Length = 95 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 44/95 (46%), Positives = 64/95 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K GN VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQVGNNVSHANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 GGLD +L +K + LS R ++ ++ K ++ Sbjct: 61 HNGGLDNWLLKTKDDKLSTRALKVKRELKKAVAAA 95 >gi|85375365|ref|YP_459427.1| 50S ribosomal protein L28 [Erythrobacter litoralis HTCC2594] gi|122543434|sp|Q2N6R1|RL28_ERYLH RecName: Full=50S ribosomal protein L28 gi|84788448|gb|ABC64630.1| ribosomal protein L28 [Erythrobacter litoralis HTCC2594] Length = 99 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVTLLSEKLDRGFKFRVSTQGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 GGLD +L +K + LS+ ++ ++ K M+E + Sbjct: 61 HNGGLDNWLLKTKDDKLSSNALKVKRELKKAMNEADA 97 >gi|154246139|ref|YP_001417097.1| 50S ribosomal protein L28 [Xanthobacter autotrophicus Py2] gi|226699185|sp|A7IHE7|RL28_XANP2 RecName: Full=50S ribosomal protein L28 gi|154160224|gb|ABS67440.1| ribosomal protein L28 [Xanthobacter autotrophicus Py2] Length = 100 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 45/88 (51%), Positives = 64/88 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K V+SG+ VSH+N+KT+RRFLPNLC +TL S+ +++ +LR+S AL+SV+ Sbjct: 1 MSRRCDLTGKGVLSGHTVSHSNHKTKRRFLPNLCNVTLESETLKRTIRLRVSANALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD FL ++ E LS R + I Sbjct: 61 HRGGLDAFLKKARDEELSPRALDFKRLI 88 >gi|304394146|ref|ZP_07376069.1| 50S ribosomal protein L28 [Ahrensia sp. R2A130] gi|303293586|gb|EFL87963.1| 50S ribosomal protein L28 [Ahrensia sp. R2A130] Length = 96 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 53/96 (55%), Positives = 72/96 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K VM+GN VSHANNKTRRRFLPNL +TL+S+ +E+ ++RI+ ALR+VE Sbjct: 1 MSRKCELTGKAVMTGNNVSHANNKTRRRFLPNLVNVTLLSEALEKGVRMRIAASALRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL K+ NLS + +R ++ KK++E + Sbjct: 61 HRGGLDAFLMKEKEVNLSPKAALIRKEVAKKLAEAA 96 >gi|158422171|ref|YP_001523463.1| 50S ribosomal protein L28 [Azorhizobium caulinodans ORS 571] gi|172048038|sp|A8IMG3|RL28_AZOC5 RecName: Full=50S ribosomal protein L28 gi|158329060|dbj|BAF86545.1| ribosomal protein L28 [Azorhizobium caulinodans ORS 571] Length = 99 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 69/90 (76%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K V++G+ VSH+N KT+RRFLPNLC +TL SD++++ ++RIS AL+SV+ Sbjct: 1 MSRRCDLTGKAVLTGHLVSHSNRKTKRRFLPNLCNVTLQSDVLQRSIRVRISANALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILK 90 +GGLD FL ++ E L+ R+ L+ QI+K Sbjct: 61 HRGGLDAFLLKARDEELAPRVLELKRQIVK 90 >gi|296282926|ref|ZP_06860924.1| 50S ribosomal protein L28 [Citromicrobium bathyomarinum JL354] Length = 96 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTQGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 GGLD +L +K E LSAR ++ ++ K + + Sbjct: 61 HNGGLDNWLLKTKDEKLSARALKVKRELKKAAAPAA 96 >gi|307293959|ref|ZP_07573803.1| ribosomal protein L28 [Sphingobium chlorophenolicum L-1] gi|306880110|gb|EFN11327.1| ribosomal protein L28 [Sphingobium chlorophenolicum L-1] Length = 97 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 46/88 (52%), Positives = 59/88 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL ++LIS+ +E +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 GGLD +L + E LS + R L+ I Sbjct: 61 HNGGLDNWLLKTSDEKLSLKARRLKRDI 88 >gi|294012907|ref|YP_003546367.1| ribosomal protein L28 [Sphingobium japonicum UT26S] gi|292676237|dbj|BAI97755.1| ribosomal protein L28 [Sphingobium japonicum UT26S] Length = 97 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/88 (51%), Positives = 59/88 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL ++LIS+ +E +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 GGLD +L + + LS + R L+ I Sbjct: 61 HNGGLDNWLLKTSDDKLSLKARRLKRDI 88 >gi|319404842|emb|CBI78443.1| 50S ribosomal protein L28 [Bartonella rochalimae ATCC BAA-1498] Length = 95 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 59/95 (62%), Positives = 72/95 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V GN VSHANNKTRRRFLPNLC +TLIS++++Q Y+LRIS ALRSVE Sbjct: 1 MSRACELTGKAVQYGNNVSHANNKTRRRFLPNLCNVTLISELLQQSYRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +GGLD FL + + LS R R L+ QI+KK ++ Sbjct: 61 HRGGLDNFLIKADDKELSQRGRLLKRQIMKKKLKE 95 >gi|217976519|ref|YP_002360666.1| 50S ribosomal protein L28 [Methylocella silvestris BL2] gi|254801369|sp|B8EQN3|RL28_METSB RecName: Full=50S ribosomal protein L28 gi|217501895|gb|ACK49304.1| ribosomal protein L28 [Methylocella silvestris BL2] Length = 96 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 70/96 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K V +GN VSH+N+KTR RFLPNLC +TLISD++++K + R++ ALRSVE Sbjct: 1 MSRRCDLTGKAVQTGNLVSHSNHKTRTRFLPNLCNVTLISDVLQRKVRFRVAVAALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL+ + LS R ++ +ILKK + S Sbjct: 61 HRGGLDAFLAKADDAELSLGARAIKREILKKQAAAS 96 >gi|87198247|ref|YP_495504.1| 50S ribosomal protein L28 [Novosphingobium aromaticivorans DSM 12444] gi|123491021|sp|Q2GBV3|RL28_NOVAD RecName: Full=50S ribosomal protein L28 gi|87133928|gb|ABD24670.1| LSU ribosomal protein L28P [Novosphingobium aromaticivorans DSM 12444] Length = 94 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 62/94 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRLFLPNLQNVTLLSEKLDRSFKFRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 GGLD +L LSAR ++ +++K + Sbjct: 61 HNGGLDNWLLKQSDTKLSARALKVKRELVKASAA 94 >gi|295691053|ref|YP_003594746.1| 50S 50S ribosomal protein L28 [Caulobacter segnis ATCC 21756] gi|295432956|gb|ADG12128.1| ribosomal protein L28 [Caulobacter segnis ATCC 21756] Length = 145 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 56/84 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M G+ VSH+N KT+RRFLP L TL S+ + Q ++LRIS ALR+++ Sbjct: 47 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPATLQSESLGQSFKLRISNAALRTLD 106 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +GGLD FL +K E LS R + Sbjct: 107 FKGGLDTFLLGAKDEQLSPRALKI 130 >gi|86747672|ref|YP_484168.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris HaA2] gi|123293234|sp|Q2J2Q3|RL28_RHOP2 RecName: Full=50S ribosomal protein L28 gi|86570700|gb|ABD05257.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris HaA2] Length = 101 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 58/84 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V +G+KVSH+N KT+RRFLPNL +T +SD + + +LR+S AL+SV+ Sbjct: 1 MSRRCELTAKGVQTGHKVSHSNIKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +GGLD FL + LS + L Sbjct: 61 HRGGLDAFLLKASVAELSPKAAEL 84 >gi|329848403|ref|ZP_08263431.1| ribosomal protein L28 [Asticcacaulis biprosthecum C19] gi|328843466|gb|EGF93035.1| ribosomal protein L28 [Asticcacaulis biprosthecum C19] Length = 96 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 65/96 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M G+ VSH+N KT+RRFLP+L + L S+ + Q Y+L+IS ALR+++ Sbjct: 1 MSRRCELTGVGPMVGHSVSHSNVKTKRRFLPSLRQTALQSEALGQAYRLKISNAALRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD FL + +LS R R L+ QI K++ K+ Sbjct: 61 FRGGLDAFLVKADDADLSLRARRLKKQIKDKLAAKA 96 >gi|94498764|ref|ZP_01305312.1| ribosomal protein L28 [Sphingomonas sp. SKA58] gi|94421773|gb|EAT06826.1| ribosomal protein L28 [Sphingomonas sp. SKA58] Length = 97 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 60/89 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K G+ VSHANNKT+R FLPNL ++LIS+ +E +LR+S LRSVE Sbjct: 1 MSRICELTGKGRQVGHNVSHANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQIL 89 GGLD +L + + LS + R L+ I+ Sbjct: 61 HNGGLDNWLVKTSDDKLSLKARRLKRDIV 89 >gi|114570840|ref|YP_757520.1| 50S ribosomal protein L28P [Maricaulis maris MCS10] gi|122315437|sp|Q0AMB1|RL28_MARMM RecName: Full=50S ribosomal protein L28 gi|114341302|gb|ABI66582.1| LSU ribosomal protein L28P [Maricaulis maris MCS10] Length = 94 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 65/94 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT V++GN VSHA NK+RRRFLPNLC +TL S+ + + ++LR++ ALRSV+ Sbjct: 1 MARRCELTGTGVLTGNNVSHAQNKSRRRFLPNLCDVTLASEKLGRGFKLRVAAKALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 GGLD +L ++ E LS + ++ + K M+ Sbjct: 61 HVGGLDVYLLKARDEKLSDKALKIKRDLKKAMAA 94 >gi|149185198|ref|ZP_01863515.1| ribosomal protein L28 [Erythrobacter sp. SD-21] gi|148831309|gb|EDL49743.1| ribosomal protein L28 [Erythrobacter sp. SD-21] Length = 95 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 62/94 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K GN VSHANNKT+R FLPNL +TL+S+ +++ ++ R+S LRSVE Sbjct: 1 MSRICELTGKGRQVGNNVSHANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTQGLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 GGLD +L + E LSA ++ ++ K + Sbjct: 61 HNGGLDNWLMKTSDEKLSANALKVKRELKKAAAA 94 >gi|302382242|ref|YP_003818065.1| ribosomal protein L28 [Brevundimonas subvibrioides ATCC 15264] gi|302192870|gb|ADL00442.1| ribosomal protein L28 [Brevundimonas subvibrioides ATCC 15264] Length = 98 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M GN VSH+N KT+RRFLP+L ++ L S+ + Q Y LRIS ALR+++ Sbjct: 1 MSRRCELTGIGPMVGNLVSHSNVKTKRRFLPSLKKVKLASEALGQSYTLRISNAALRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD F+ + E LS + ++ Q+ K++E+++ Sbjct: 61 FKGGLDPFIVKADDEKLSVAAQRIKRQVKAKLAEQAA 97 >gi|16124914|ref|NP_419478.1| 50S ribosomal protein L28 [Caulobacter crescentus CB15] gi|221233636|ref|YP_002516072.1| 50S ribosomal protein L28 [Caulobacter crescentus NA1000] gi|20139681|sp|Q9AAE1|RL28_CAUCR RecName: Full=50S ribosomal protein L28 gi|254801349|sp|B8H0R5|RL28_CAUCN RecName: Full=50S ribosomal protein L28 gi|13421878|gb|AAK22646.1| ribosomal protein L28 [Caulobacter crescentus CB15] gi|220962808|gb|ACL94164.1| LSU ribosomal protein L28P [Caulobacter crescentus NA1000] Length = 99 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 56/84 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M G+ VSH+N KT+RRFLP L TL S+ + Q ++LRIS ALR+++ Sbjct: 1 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPATLQSESLGQSFKLRISNAALRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +GGLD FL +K E LS R + Sbjct: 61 FKGGLDTFLLGAKDEQLSPRALKI 84 >gi|209966402|ref|YP_002299317.1| ribosomal protein L28 [Rhodospirillum centenum SW] gi|226699154|sp|B6IW31|RL28_RHOCS RecName: Full=50S ribosomal protein L28 gi|209959868|gb|ACJ00505.1| ribosomal protein L28 [Rhodospirillum centenum SW] Length = 99 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 62/97 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C +T K V +GN VSHANNK+RRR+LPNL +L+SD + + +LR+S +R++E Sbjct: 1 MSRKCAVTGKGVQTGNNVSHANNKSRRRWLPNLQETSLLSDTLGRMVRLRLSTNGIRTIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD L + L+ R ++ QI K + K + Sbjct: 61 HKGGLDAALLDIPDARLNQDARRVKKQIQKAIEAKKA 97 >gi|315498114|ref|YP_004086918.1| ribosomal protein l28 [Asticcacaulis excentricus CB 48] gi|315416126|gb|ADU12767.1| ribosomal protein L28 [Asticcacaulis excentricus CB 48] Length = 98 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 43/88 (48%), Positives = 58/88 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M G+ VSH+N KT+RRFLP+L L S+ + Q ++L+IS ALR+++ Sbjct: 1 MSRRCELTGVGPMVGHSVSHSNIKTKRRFLPSLRETALQSEALGQSFRLKISNAALRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 +GGLD FL + LS R R L+ QI Sbjct: 61 FKGGLDAFLVKADDTELSLRARRLKKQI 88 >gi|312113448|ref|YP_004011044.1| ribosomal protein L28 [Rhodomicrobium vannielii ATCC 17100] gi|311218577|gb|ADP69945.1| ribosomal protein L28 [Rhodomicrobium vannielii ATCC 17100] Length = 102 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 49/90 (54%), Positives = 65/90 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + G+ VSH+N KT+RR+LPNLC +TLISD + + +LRIS ALRSVE Sbjct: 1 MSRQCELTGKGGLVGHLVSHSNIKTKRRYLPNLCNVTLISDSLGRGVRLRISANALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILK 90 +GGLD FL ++ E LS + R L+ ++ K Sbjct: 61 HRGGLDAFLLKARDEELSLKARRLKKEVSK 90 >gi|298293653|ref|YP_003695592.1| ribosomal protein L28 [Starkeya novella DSM 506] gi|296930164|gb|ADH90973.1| ribosomal protein L28 [Starkeya novella DSM 506] Length = 102 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 46/91 (50%), Positives = 66/91 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V++GN VSH+N KTRRRFLPNL +TL SD++++ +LR+S AL++V+ Sbjct: 1 MSRRCELTGKAVLTGNLVSHSNRKTRRRFLPNLVNVTLTSDVLKRSVKLRVSANALKTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD FL ++ E LS + L+ ++K Sbjct: 61 HRGGLDAFLIKARTEELSPKAAELKRAVVKA 91 >gi|167648087|ref|YP_001685750.1| 50S ribosomal protein L28 [Caulobacter sp. K31] gi|189042427|sp|B0SXP0|RL28_CAUSK RecName: Full=50S ribosomal protein L28 gi|167350517|gb|ABZ73252.1| ribosomal protein L28 [Caulobacter sp. K31] Length = 101 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 43/82 (52%), Positives = 55/82 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M G+ VSH+N KT+RRFLP L +L SD + Q ++LRIS ALR+++ Sbjct: 1 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPASLQSDSLGQTFKLRISNAALRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMR 82 +GGLD FL +K E LS R Sbjct: 61 FRGGLDVFLLGAKDEQLSPRAL 82 >gi|114799496|ref|YP_762169.1| 50S ribosomal protein [Hyphomonas neptunium ATCC 15444] gi|122941994|sp|Q0BWH4|RL28_HYPNA RecName: Full=50S ribosomal protein L28 gi|114739670|gb|ABI77795.1| 50S ribosomal protein [Hyphomonas neptunium ATCC 15444] Length = 94 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 44/91 (48%), Positives = 65/91 (71%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT M GN VSH+ KT+RR+LPNL ++TL S+ ++Q +++RI+ ALR+V+ Sbjct: 1 MSRECELTGTKPMVGNIVSHSQIKTKRRYLPNLVQVTLRSEALDQNFRMRIAAKALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 + GGLD FL+ +K+E LS + ++ I KK Sbjct: 61 KLGGLDAFLAKAKEEGLSTKALKIKRDIAKK 91 >gi|300024668|ref|YP_003757279.1| ribosomal protein L28 [Hyphomicrobium denitrificans ATCC 51888] gi|299526489|gb|ADJ24958.1| ribosomal protein L28 [Hyphomicrobium denitrificans ATCC 51888] Length = 97 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 66/97 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT +SG SHA NKT+R+F PNL +TL+SD + +K +LRIS AL+SVE Sbjct: 1 MTRRCELTGTLPLSGQLRSHAENKTKRKFRPNLHNVTLLSDALGRKVRLRISARALKSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD FL +K + LSA L+ ++ K +EK++ Sbjct: 61 HRGGLDAFLLKAKNDELSAACLKLKRELQKAQAEKAA 97 >gi|83591550|ref|YP_425302.1| 50S ribosomal protein L28 [Rhodospirillum rubrum ATCC 11170] gi|123527567|sp|Q2RXY0|RL28_RHORT RecName: Full=50S ribosomal protein L28 gi|83574464|gb|ABC21015.1| LSU ribosomal protein L28P [Rhodospirillum rubrum ATCC 11170] Length = 99 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 63/90 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C +T K V +GN VSH+N K+RRRFLPNL +L+SD++ + ++R+S LR+VE Sbjct: 1 MSRRCAVTGKGVQTGNNVSHSNIKSRRRFLPNLQVNSLMSDLLREPVRMRLSAHGLRTVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILK 90 +GG+D FL ++ L+ +R ++ +++K Sbjct: 61 HRGGIDAFLLSTPSVELTVELRKVKRRMVK 90 >gi|182680325|ref|YP_001834471.1| 50S ribosomal protein L28 [Beijerinckia indica subsp. indica ATCC 9039] gi|226738033|sp|B2IEP2|RL28_BEII9 RecName: Full=50S ribosomal protein L28 gi|182636208|gb|ACB96982.1| ribosomal protein L28 [Beijerinckia indica subsp. indica ATCC 9039] Length = 98 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 62/89 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K V++GN VSH+N KTR RFLPNLC +TLISD ++++ R++ LRSVE Sbjct: 1 MSRRCELTGKAVLTGNLVSHSNRKTRTRFLPNLCNVTLISDTLQRRIHFRVAAATLRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQIL 89 +GGLD FL + LS +++ +I+ Sbjct: 61 HRGGLDAFLVKAADAQLSPGALSVKREIV 89 >gi|15603977|ref|NP_220492.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Madrid E] gi|6225989|sp|Q9ZE48|RL28_RICPR RecName: Full=50S ribosomal protein L28 gi|3860668|emb|CAA14569.1| 50S RIBOSOMAL PROTEIN L28 (rpmB) [Rickettsia prowazekii] gi|292571691|gb|ADE29606.1| 50S ribosomal protein L28 [Rickettsia prowazekii Rp22] Length = 97 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 60/96 (62%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL I SDI ++ Y+L ++ +RSVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSIKFRSDITDEVYRLSVNARCIRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + + LS+ R ++ +I+ + KS Sbjct: 61 KAGGFDAYILKANDDILSSAARAIKQKIIHIKAAKS 96 >gi|254293143|ref|YP_003059166.1| ribosomal protein L28 [Hirschia baltica ATCC 49814] gi|254041674|gb|ACT58469.1| ribosomal protein L28 [Hirschia baltica ATCC 49814] Length = 98 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 43/88 (48%), Positives = 66/88 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K ++GN VSH+N +T+RRFLPNL +++L S+ + Q+++LRI+ ALR+V+ Sbjct: 1 MSRECELTGKKPITGNNVSHSNLRTKRRFLPNLVKVSLRSEALGQEFKLRIAASALRTVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQI 88 ++GGLD FL+ +E LSA+ ++ I Sbjct: 61 KRGGLDAFLAKETEEKLSAKAAKIKRDI 88 >gi|51473250|ref|YP_067007.1| 50S ribosomal protein L28 [Rickettsia typhi str. Wilmington] gi|67461384|sp|Q68XW7|RL28_RICTY RecName: Full=50S ribosomal protein L28 gi|51459562|gb|AAU03525.1| 50S ribosomal protein L28 [Rickettsia typhi str. Wilmington] Length = 97 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 61/96 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT +V+ GN VSH+ KTRRRF PNL + SDI ++ Y+L ++ +RSVE Sbjct: 1 MSRKCELTGVSVLYGNNVSHSQRKTRRRFEPNLRSVKFRSDITDEVYRLSVNARCIRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + + LS+ R ++ +I+ + +S Sbjct: 61 KAGGFDEYILKANNDVLSSTARAIKQKIIDIKAVES 96 >gi|148261685|ref|YP_001235812.1| 50S ribosomal protein L28 [Acidiphilium cryptum JF-5] gi|326405178|ref|YP_004285260.1| 50S ribosomal protein L28 [Acidiphilium multivorum AIU301] gi|166226532|sp|A5G211|RL28_ACICJ RecName: Full=50S ribosomal protein L28 gi|146403366|gb|ABQ31893.1| LSU ribosomal protein L28P [Acidiphilium cryptum JF-5] gi|325052040|dbj|BAJ82378.1| 50S ribosomal protein L28 [Acidiphilium multivorum AIU301] Length = 100 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 41/84 (48%), Positives = 58/84 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C++T K+V+SGN VSHANNK+RRRFLPNL L SD + +LR++ L ++E Sbjct: 1 MTRRCDITGKSVLSGNNVSHANNKSRRRFLPNLQDSALQSDALGHSVKLRVTPRGLATIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++GGLD FL ++ L+ RTL Sbjct: 61 QKGGLDAFLLDTPNRKLTDEARTL 84 >gi|330813137|ref|YP_004357376.1| LSU ribosomal protein L28p [Candidatus Pelagibacter sp. IMCC9063] gi|327486232|gb|AEA80637.1| LSU ribosomal protein L28p [Candidatus Pelagibacter sp. IMCC9063] Length = 116 Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 42/91 (46%), Positives = 66/91 (72%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VCELT K MSGN VSH+NNKT+R+F PNL +++L S+++ + +IS AL++V+ Sbjct: 24 MAKVCELTGKRPMSGNTVSHSNNKTKRKFYPNLKKVSLRSELLNKNISFKISTRALKAVD 83 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GG+D FL +K L+ R++ ++ QIL K Sbjct: 84 FRGGIDEFLIRAKNAKLALRVKKIKKQILSK 114 >gi|56416932|ref|YP_154006.1| 50S ribosomal protein L28 [Anaplasma marginale str. St. Maries] gi|222475298|ref|YP_002563715.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Florida] gi|56388164|gb|AAV86751.1| 50S ribosomal protein L28 [Anaplasma marginale str. St. Maries] gi|222419436|gb|ACM49459.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Florida] Length = 134 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 61/96 (63%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC++T GNKVSH+N KT+R +L NL +TL+S+++ +K++++++ LR++ Sbjct: 33 SRVCDVTGLAKSFGNKVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINY 92 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GG D +L N+ LS + ++ +I ++ S Sbjct: 93 KGGFDLYLLNTASRKLSDEAQKIKRKIRAAIASGKS 128 >gi|254258430|ref|ZP_04949484.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a] gi|254217119|gb|EET06503.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a] Length = 454 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 378 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 437 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 438 KNG-IDSVLADLRAR 451 >gi|254466084|ref|ZP_05079495.1| ribosomal protein L28 [Rhodobacterales bacterium Y4I] gi|206686992|gb|EDZ47474.1| ribosomal protein L28 [Rhodobacterales bacterium Y4I] Length = 84 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 61/84 (72%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN VSHANNKT+RRFLPNL +TL S+++ + +LRIS ALRSV+ +GGLD FL+ + Sbjct: 1 MTGNNVSHANNKTKRRFLPNLNDVTLQSEVLGRGVKLRISAAALRSVDHRGGLDAFLAKA 60 Query: 73 KKENLSARMRTLRSQILKKMSEKS 96 K E LSA ++ +I K + ++ Sbjct: 61 KDEELSANALKVKKEIAKAQAAQA 84 >gi|15892059|ref|NP_359773.1| 50S ribosomal protein L28 [Rickettsia conorii str. Malish 7] gi|34580910|ref|ZP_00142390.1| 50S ribosomal protein L28 [Rickettsia sibirica 246] gi|157964165|ref|YP_001498989.1| 50S ribosomal protein L28 [Rickettsia massiliae MTU5] gi|229586339|ref|YP_002844840.1| 50S ribosomal protein L28 [Rickettsia africae ESF-5] gi|239947148|ref|ZP_04698901.1| 50S ribosomal protein L28 [Rickettsia endosymbiont of Ixodes scapularis] gi|20139556|sp|Q92JD1|RL28_RICCN RecName: Full=50S ribosomal protein L28 gi|166987915|sp|A8F0K6|RL28_RICM5 RecName: Full=50S ribosomal protein L28 gi|259646748|sp|C3PMD7|RL28_RICAE RecName: Full=50S ribosomal protein L28 gi|15619179|gb|AAL02674.1| 50S ribosomal protein L28 [Rickettsia conorii str. Malish 7] gi|28262295|gb|EAA25799.1| 50S ribosomal protein L28 [Rickettsia sibirica 246] gi|157843941|gb|ABV84442.1| 50S ribosomal protein L28 [Rickettsia massiliae MTU5] gi|228021389|gb|ACP53097.1| 50S ribosomal protein L28 [Rickettsia africae ESF-5] gi|239921424|gb|EER21448.1| 50S ribosomal protein L28 [Rickettsia endosymbiont of Ixodes scapularis] Length = 97 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + SDI +Y+L ++ + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS+ R ++ +I++ + KS Sbjct: 61 KAGGFDAYILKADDNVLSSNARAIKKKIIQTKTAKS 96 >gi|67458475|ref|YP_246099.1| 50S ribosomal protein L28 [Rickettsia felis URRWXCal2] gi|75537055|sp|Q4UNC4|RL28_RICFE RecName: Full=50S ribosomal protein L28 gi|67004008|gb|AAY60934.1| 50S ribosomal protein L28 [Rickettsia felis URRWXCal2] Length = 97 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + SDI +Y+L ++ + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS+ RT++ +I++ + KS Sbjct: 61 KAGGFDAYILKADDNVLSSNARTIKKKIIQTKTAKS 96 >gi|91206094|ref|YP_538449.1| 50S ribosomal protein L28 [Rickettsia bellii RML369-C] gi|157826473|ref|YP_001495537.1| 50S ribosomal protein L28 [Rickettsia bellii OSU 85-389] gi|122425214|sp|Q1RH04|RL28_RICBR RecName: Full=50S ribosomal protein L28 gi|166226612|sp|A8GUK4|RL28_RICB8 RecName: Full=50S ribosomal protein L28 gi|91069638|gb|ABE05360.1| 50S ribosomal protein L28 [Rickettsia bellii RML369-C] gi|157801777|gb|ABV78500.1| 50S ribosomal protein L28 [Rickettsia bellii OSU 85-389] Length = 97 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 58/96 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + ISDI +Y+L +S + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFISDITTAEYRLSVSARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + + LS + ++ +I++ KS Sbjct: 61 KAGGFDAYMLKANNDALSTTAKAIKKKIIQTKMAKS 96 >gi|157828010|ref|YP_001494252.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932708|ref|YP_001649497.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Iowa] gi|166226614|sp|A8GQR9|RL28_RICRS RecName: Full=50S ribosomal protein L28 gi|189029452|sp|B0BW65|RL28_RICRO RecName: Full=50S ribosomal protein L28 gi|157800491|gb|ABV75744.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907795|gb|ABY72091.1| LSU ribosomal protein L28P [Rickettsia rickettsii str. Iowa] Length = 97 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 57/96 (59%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + SDI +Y+L ++ + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS R ++ +I++ + KS Sbjct: 61 KAGGFDAYILKADDNVLSGNARAIKKKIIQTKTAKS 96 >gi|157825271|ref|YP_001492991.1| 50S ribosomal protein L28 [Rickettsia akari str. Hartford] gi|166226611|sp|A8GM58|RL28_RICAH RecName: Full=50S ribosomal protein L28 gi|157799229|gb|ABV74483.1| 50S ribosomal protein L28 [Rickettsia akari str. Hartford] Length = 97 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 58/96 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + SDI KY+L ++ + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS+ R ++ +I++ + KS Sbjct: 61 KAGGFDAYILQADDNVLSSNARAIKKKIIQTKTAKS 96 >gi|238650564|ref|YP_002916416.1| 50S ribosomal protein L28 [Rickettsia peacockii str. Rustic] gi|259646749|sp|C4K1B7|RL28_RICPU RecName: Full=50S ribosomal protein L28 gi|238624662|gb|ACR47368.1| 50S ribosomal protein L28 [Rickettsia peacockii str. Rustic] Length = 97 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT V+ GN VSH+ KTRRRF PNL + SDI +Y+L ++ + SVE Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFKPNLRSVKFTSDITAGEYRLSVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS+ R ++ +I++ + KS Sbjct: 61 KAGGFDAYILKADDNVLSSNARAIKKKIIQTKTAKS 96 >gi|269958654|ref|YP_003328441.1| 50S ribosomal protein L28 [Anaplasma centrale str. Israel] gi|269848483|gb|ACZ49127.1| 50S ribosomal protein L28 [Anaplasma centrale str. Israel] Length = 117 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 61/96 (63%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC++T GN+VSH+N KT+R +L NL +TL+S+++ +K++++++ LR++ Sbjct: 16 SRVCDVTGLAKSFGNRVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINY 75 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GG D +L N+ LS + ++ +I ++ S Sbjct: 76 KGGFDLYLLNTASRKLSDEAQKIKRKIRAAIASGKS 111 >gi|255003282|ref|ZP_05278246.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Puerto Rico] Length = 117 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 61/96 (63%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC++T GNKVSH+N KT+R +L NL +TL+S+++ +K++++++ LR++ Sbjct: 16 SRVCDVTGLAKSFGNKVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINY 75 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GG D +L N+ LS + ++ +I ++ S Sbjct: 76 KGGFDLYLLNTASRKLSDEAQKIKRKIRAAIASGKS 111 >gi|254995116|ref|ZP_05277306.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Mississippi] gi|255004409|ref|ZP_05279210.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Virginia] Length = 103 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 62/97 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T GN+VSH+N KT+R +L NL +TL+S+++ +K++++++ LR++ Sbjct: 1 MSRVCDVTGLAKSFGNRVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTIN 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GG D +L N+ LS + ++ +I ++ S Sbjct: 61 YKGGFDLYLLNTASRKLSDEAQKIKRKIRAAIASGKS 97 >gi|58617277|ref|YP_196476.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Gardel] gi|75432681|sp|Q5FFP1|RL28_EHRRG RecName: Full=50S ribosomal protein L28 gi|58416889|emb|CAI28002.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Gardel] Length = 100 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 62/94 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T +T GNKVSH+N KT+R +L NL +TL SD++ +K++ +IS LR+++ Sbjct: 1 MSRVCDITGQTKSFGNKVSHSNRKTKRTYLVNLHNVTLFSDVLNRKFRFKISSRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 +GG D +L + LS + + ++ I K +E Sbjct: 61 YKGGFDLYLLETSSRKLSDKAQKIKKMIKKATAE 94 >gi|67461310|sp|Q5PAC9|RL28_ANAMM RecName: Full=50S ribosomal protein L28 Length = 103 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 62/97 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T GNKVSH+N KT+R +L NL +TL+S+++ +K++++++ LR++ Sbjct: 1 MSRVCDVTGLAKSFGNKVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTIN 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GG D +L N+ LS + ++ +I ++ S Sbjct: 61 YKGGFDLYLLNTASRKLSDEAQKIKRKIRAAIASGKS 97 >gi|57239262|ref|YP_180398.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden] gi|58579225|ref|YP_197437.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden] gi|81557296|sp|Q5HAZ6|RL28_EHRRW RecName: Full=50S ribosomal protein L28 gi|57161341|emb|CAH58264.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden] gi|58417851|emb|CAI27055.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden] Length = 100 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 64/96 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T +T GNKVSH+N KT+R +L NL +TL SD++ +K++ +IS LR+++ Sbjct: 1 MSRVCDITGQTKSFGNKVSHSNRKTKRTYLVNLHNVTLFSDVLNRKFRFKISSRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +GGLD +L + LS + + ++ I K +E + Sbjct: 61 YKGGLDLYLLETSSRKLSDKAQKIKKMIKKATAENA 96 >gi|157803281|ref|YP_001491830.1| 50S ribosomal protein L28 [Rickettsia canadensis str. McKiel] gi|166226613|sp|A8EXG2|RL28_RICCK RecName: Full=50S ribosomal protein L28 gi|157784544|gb|ABV73045.1| 50S ribosomal protein L28 [Rickettsia canadensis str. McKiel] Length = 97 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT V+ GN VSH+ KTRRRF PNL + SDI Y+L ++ + SVE Sbjct: 1 MSRKCDLTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFKSDITSGAYRLLVNARCISSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 + GG D ++ + LS+ R ++ +I++ + KS Sbjct: 61 KAGGFDAYILKADDNVLSSAARAIKKKIIQTKTAKS 96 >gi|315121776|ref|YP_004062265.1| 50S ribosomal protein L28 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495178|gb|ADR51777.1| 50S ribosomal protein L28 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 103 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 82/97 (84%), Positives = 90/97 (92%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT+KTVMSGNKVS +NNKT+RRFLPNLCRITLISDIM Q+YQLRISK ALRSVE Sbjct: 1 MSRVCELTRKTVMSGNKVSRSNNKTKRRFLPNLCRITLISDIMGQQYQLRISKHALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 RQGGLD+FL +SKKENLS R R LRSQI+KK+SEKSS Sbjct: 61 RQGGLDQFLLHSKKENLSDRTRLLRSQIIKKISEKSS 97 >gi|148284100|ref|YP_001248190.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Boryong] gi|166226593|sp|A5CC87|RL28_ORITB RecName: Full=50S ribosomal protein L28 gi|146739539|emb|CAM79268.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Boryong] Length = 96 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 65/97 (67%), Gaps = 1/97 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +V SG+ VSH+ KT+R+FLPNL ++L SD +++ ++ ++ A+R+++ Sbjct: 1 MSRVCELTGVSVQSGHNVSHSQRKTKRKFLPNLQNVSLFSDSLKKAFKFKVVARAIRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 + GGLD +L ++ + LS ++ I+K KSS Sbjct: 61 KVGGLDCYLLSASDKILSKFAIEVKK-IIKNNGSKSS 96 >gi|33593074|ref|NP_880718.1| 50S ribosomal protein L28 [Bordetella pertussis Tohama I] gi|33596368|ref|NP_884011.1| 50S ribosomal protein L28 [Bordetella parapertussis 12822] gi|33602345|ref|NP_889905.1| 50S ribosomal protein L28 [Bordetella bronchiseptica RB50] gi|187478973|ref|YP_786997.1| 50S ribosomal protein L28 [Bordetella avium 197N] gi|67461507|sp|Q7VWY1|RL28_BORPE RecName: Full=50S ribosomal protein L28 gi|67461508|sp|Q7W9L9|RL28_BORPA RecName: Full=50S ribosomal protein L28 gi|67461509|sp|Q7WH39|RL28_BORBR RecName: Full=50S ribosomal protein L28 gi|123514301|sp|Q2KXH8|RL28_BORA1 RecName: Full=50S ribosomal protein L28 gi|33563449|emb|CAE42330.1| 50S ribosomal protein L28 [Bordetella pertussis Tohama I] gi|33566137|emb|CAE37038.1| 50S ribosomal protein L28 [Bordetella parapertussis] gi|33576784|emb|CAE33863.1| 50S ribosomal protein L28 [Bordetella bronchiseptica RB50] gi|115423559|emb|CAJ50095.1| 50S ribosomal protein L28 [Bordetella avium 197N] gi|332382486|gb|AEE67333.1| 50S ribosomal protein L28 [Bordetella pertussis CS] Length = 78 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR++ A+R+++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|317405790|gb|EFV86080.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans C54] Length = 78 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR+S A+R+++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ + Sbjct: 61 KNG-IDAVLAEMRAR 74 >gi|116205609|ref|XP_001228615.1| hypothetical protein CHGG_10688 [Chaetomium globosum CBS 148.51] gi|88176816|gb|EAQ84284.1| hypothetical protein CHGG_10688 [Chaetomium globosum CBS 148.51] Length = 254 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 11 TVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN VS NN KTRR++ PN+ L S + + R++ LR+V++ GGLD +L Sbjct: 84 RIRFGNNVSERNNIKTRRQWRPNVHHKRLWSASLGVFVRTRVTARVLRTVDKAGGLDEYL 143 Query: 70 SNS---KKENLSARMRTLRSQILKKMSEKS 96 + +L LR +I++ + ++ Sbjct: 144 LGRTPQRVRDLGPWGWKLRWRIMQTPAVRA 173 >gi|237811180|ref|YP_002895631.1| ribosomal protein L28 [Burkholderia pseudomallei MSHR346] gi|237503801|gb|ACQ96119.1| ribosomal protein L28 [Burkholderia pseudomallei MSHR346] Length = 163 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 87 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 146 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 147 KNG-IDSVLADLRAR 160 >gi|218661315|ref|ZP_03517245.1| 50S ribosomal protein L28 [Rhizobium etli IE4771] Length = 85 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 51/82 (62%), Positives = 64/82 (78%) Query: 15 GNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKK 74 GN VSHANNKT+RRFLPNLC++TLISD + Q+Y+LR+S ALRSVE +GGLD FL + + Sbjct: 1 GNNVSHANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGLDAFLLKASE 60 Query: 75 ENLSARMRTLRSQILKKMSEKS 96 LS R R LR QI+KK +E + Sbjct: 61 NELSMRARLLRRQIVKKTAEAA 82 >gi|88608656|ref|YP_506211.1| ribosomal protein L28 [Neorickettsia sennetsu str. Miyayama] gi|123492103|sp|Q2GE85|RL28_NEOSM RecName: Full=50S ribosomal protein L28 gi|88600825|gb|ABD46293.1| ribosomal protein L28 [Neorickettsia sennetsu str. Miyayama] Length = 102 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 41/93 (44%), Positives = 66/93 (70%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT +GN VSH+N KT++RF+PNL R+T+ SD+++QK++ ++S +R+++ Sbjct: 1 MSNSCDLTGHGWQNGNMVSHSNRKTKKRFMPNLQRVTVFSDVLKQKFRFKVSAKTIRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD FL N+K LS L+ +I+KK+S Sbjct: 61 FKGGLDDFLRNTKNSKLSKSALVLKKRIMKKVS 93 >gi|311107980|ref|YP_003980833.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans A8] gi|310762669|gb|ADP18118.1| ribosomal protein L28 [Achromobacter xylosoxidans A8] Length = 78 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR+S A+R+++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ + Sbjct: 61 KNG-IDAVLAEMRAR 74 >gi|239814289|ref|YP_002943199.1| 50S ribosomal protein L28 [Variovorax paradoxus S110] gi|319792070|ref|YP_004153710.1| ribosomal protein l28 [Variovorax paradoxus EPS] gi|259646753|sp|C5CRK1|RL28_VARPS RecName: Full=50S ribosomal protein L28 gi|239800866|gb|ACS17933.1| ribosomal protein L28 [Variovorax paradoxus S110] gi|315594533|gb|ADU35599.1| ribosomal protein L28 [Variovorax paradoxus EPS] Length = 77 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCDVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|169862685|ref|XP_001837968.1| 50S ribosomal protein L24 [Coprinopsis cinerea okayama7#130] gi|116500955|gb|EAU83850.1| 50S ribosomal protein L24 [Coprinopsis cinerea okayama7#130] Length = 192 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 55/89 (61%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K++ GN V + +KTRR +LPN+ R L S+++ +K +++++ ALR++++ GGLD + Sbjct: 25 GKSIQYGNNVPFSKHKTRRTWLPNVQRKRLDSEVLGEKVRIKVTTRALRTIKKYGGLDNY 84 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEKSS 97 L ++ LS L+ +I ++K + Sbjct: 85 LKGTQSHKLSFAGLDLKLKIKDAEAKKLA 113 >gi|121599881|ref|YP_993944.1| 50S ribosomal protein L28 [Burkholderia mallei SAVP1] gi|217419760|ref|ZP_03451266.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 576] gi|238562658|ref|ZP_00440037.2| 50S ribosomal protein L28 [Burkholderia mallei GB8 horse 4] gi|242314284|ref|ZP_04813300.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106b] gi|251766709|ref|ZP_04819772.1| 50S ribosomal protein L28 [Burkholderia mallei PRL-20] gi|262193282|ref|YP_001081631.2| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10247] gi|121228691|gb|ABM51209.1| 50S ribosomal protein L28 [Burkholderia mallei SAVP1] gi|217397064|gb|EEC37080.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 576] gi|238522152|gb|EEP85598.1| 50S ribosomal protein L28 [Burkholderia mallei GB8 horse 4] gi|242137523|gb|EES23925.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106b] gi|243064992|gb|EES47178.1| 50S ribosomal protein L28 [Burkholderia mallei PRL-20] gi|261835068|gb|ABO05945.2| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10247] Length = 163 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 87 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 146 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 147 KNG-IDSVLADLRAR 160 >gi|254500400|ref|ZP_05112551.1| ribosomal protein L28, putative [Labrenzia alexandrii DFL-11] gi|222436471|gb|EEE43150.1| ribosomal protein L28, putative [Labrenzia alexandrii DFL-11] Length = 87 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 41/85 (48%), Positives = 60/85 (70%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN VSHANNK+RRRFLPNLC ++L+SD + + ++L++S ALRSVE +GGLD +L + Sbjct: 1 MTGNNVSHANNKSRRRFLPNLCNVSLMSDTLGETFKLKVSAHALRSVEHRGGLDAYLMKA 60 Query: 73 KKENLSARMRTLRSQILKKMSEKSS 97 LS R ++ I +K E ++ Sbjct: 61 SDAELSDNARKIKVSIKRKQEEAAA 85 >gi|254196472|ref|ZP_04902896.1| 50S ribosomal protein L28 [Burkholderia pseudomallei S13] gi|169653215|gb|EDS85908.1| 50S ribosomal protein L28 [Burkholderia pseudomallei S13] Length = 163 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 87 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 146 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 147 KNG-IDSVLADLRAR 160 >gi|221638418|ref|YP_002524680.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides KD131] gi|332557448|ref|ZP_08411770.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides WS8N] gi|221159199|gb|ACM00179.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides KD131] gi|332275160|gb|EGJ20475.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides WS8N] Length = 84 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 44/84 (52%), Positives = 63/84 (75%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN VSHANNK+RRRFLPNL +TLISD++ Q ++LRIS ALR+V+ +GGLD FL+ + Sbjct: 1 MTGNTVSHANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVDHRGGLDAFLAKA 60 Query: 73 KKENLSARMRTLRSQILKKMSEKS 96 K + LS + R ++ +I K + + Sbjct: 61 KDDELSVKARAIKKEIEKAQATAA 84 >gi|257094340|ref|YP_003167981.1| 50S ribosomal protein L28 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046864|gb|ACV36052.1| ribosomal protein L28 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 77 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M+GN VSHANN+T+RRFLPNL + + +LR+S LR+++ Sbjct: 1 MARVCQVTGKGPMAGNNVSHANNRTKRRFLPNLQYRRFWIEGENRWVRLRVSNAGLRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDVVLADLRAR 74 >gi|189184694|ref|YP_001938479.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Ikeda] gi|226699054|sp|B3CV48|RL28_ORITI RecName: Full=50S ribosomal protein L28 gi|189181465|dbj|BAG41245.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Ikeda] Length = 95 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 62/94 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +V SG+ VSH+ KT+R+FLPNL ++L SD +++ ++ ++ A+R+++ Sbjct: 1 MSRVCELTGVSVQSGHNVSHSQRKTKRKFLPNLQNVSLFSDSLKKAFKFKVVARAMRTLD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GGLD +L ++ + LS ++ I S+ Sbjct: 61 KVGGLDCYLLSASDKTLSKSAIEVKKIIKNNESK 94 >gi|73667160|ref|YP_303176.1| 50S ribosomal protein L28 [Ehrlichia canis str. Jake] gi|123614861|sp|Q3YRS7|RL28_EHRCJ RecName: Full=50S ribosomal protein L28 gi|72394301|gb|AAZ68578.1| LSU ribosomal protein L28P [Ehrlichia canis str. Jake] Length = 100 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 63/94 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T + GNKVSH+N KT+R +L NL +TL+SDI+ +K++ ++S LR+++ Sbjct: 1 MSRVCDITGQGKSFGNKVSHSNRKTKRTYLVNLHNVTLLSDILNRKFKFKVSSRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 +GG D +L N+ L+ + + ++ + +++ Sbjct: 61 YKGGFDLYLLNTSSRKLTDKAQKIKKLVKNAVAK 94 >gi|163857625|ref|YP_001631923.1| 50S ribosomal protein L28 [Bordetella petrii DSM 12804] gi|226738038|sp|A9HWU4|RL28_BORPD RecName: Full=50S ribosomal protein L28 gi|163261353|emb|CAP43655.1| 50S ribosomal protein L28 [Bordetella petrii] Length = 78 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M+GN VSHANNKT+RRFLPNL + + +LR+S A+R ++ Sbjct: 1 MARVCQVTGKGPMTGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|297182661|gb|ADI18819.1| ribosomal protein l28 [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 108 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 46/91 (50%), Positives = 65/91 (71%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K+ + G+KVSHANNKT+R+F PNL ++T S I+ + +L++S ALR+V+ Sbjct: 17 MSRKCELTGKSPLKGHKVSHANNKTKRKFFPNLKKVTFKSKILRRNIKLQVSNAALRTVD 76 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKK 91 +GGLD FL K LS R + L++QI+ K Sbjct: 77 YKGGLDNFLKTVKTHKLSKRAKGLKNQIITK 107 >gi|121606104|ref|YP_983433.1| 50S ribosomal protein L28 [Polaromonas naphthalenivorans CJ2] gi|166226597|sp|A1VS84|RL28_POLNA RecName: Full=50S ribosomal protein L28 gi|120595073|gb|ABM38512.1| LSU ribosomal protein L28P [Polaromonas naphthalenivorans CJ2] Length = 77 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRF+PNL + + + +LRI+ LR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFMPNLQYRRIWVESENRWVRLRITAAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L + + Sbjct: 61 KNG-IDAVLVDLRAR 74 >gi|260220651|emb|CBA28404.1| 50S ribosomal protein L28 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 93 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GN VSHANNKT+RRFLPNL + + +LRIS LR ++ Sbjct: 17 MARVCEVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRISNAGLRLID 76 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 77 KNG-IDSVLADLRAR 90 >gi|121608722|ref|YP_996529.1| 50S ribosomal protein L28 [Verminephrobacter eiseniae EF01-2] gi|166228170|sp|A1WIQ4|RL28_VEREI RecName: Full=50S ribosomal protein L28 gi|121553362|gb|ABM57511.1| LSU ribosomal protein L28P [Verminephrobacter eiseniae EF01-2] Length = 77 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKTRRRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCDVTGKKPMVGNNVSHANNKTRRRFLPNLQYRRFWVETENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|296136855|ref|YP_003644097.1| ribosomal protein L28 [Thiomonas intermedia K12] gi|294341024|emb|CAZ89419.1| 50S ribosomal protein L28 [Thiomonas sp. 3As] gi|295796977|gb|ADG31767.1| ribosomal protein L28 [Thiomonas intermedia K12] Length = 77 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR++ LR+++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRFVRLRVTSSGLRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDVVLAELRSR 74 >gi|88607418|ref|YP_504966.1| 50S ribosomal protein L28 [Anaplasma phagocytophilum HZ] gi|123495525|sp|Q2GKY5|RL28_ANAPZ RecName: Full=50S ribosomal protein L28 gi|88598481|gb|ABD43951.1| ribosomal protein L28 [Anaplasma phagocytophilum HZ] Length = 103 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 64/93 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T + GNKVSH+N KT+R +L NL +TL+S+++ +K++++++ LR+++ Sbjct: 1 MSRVCDITGASKSFGNKVSHSNRKTKRSYLVNLHNVTLVSEVLGRKFRVKVASRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMS 93 +GGLD +L N+ L+ R ++ +I ++ Sbjct: 61 YKGGLDLYLLNTSSRKLTEVARKIKRKIKVAIA 93 >gi|121595684|ref|YP_987580.1| 50S ribosomal protein L28 [Acidovorax sp. JS42] gi|221068788|ref|ZP_03544893.1| ribosomal protein L28 [Comamonas testosteroni KF-1] gi|222111892|ref|YP_002554156.1| 50S ribosomal protein l28 [Acidovorax ebreus TPSY] gi|264677019|ref|YP_003276925.1| ribosomal protein L28 [Comamonas testosteroni CNB-2] gi|299532561|ref|ZP_07045951.1| 50S ribosomal protein L28 [Comamonas testosteroni S44] gi|319761898|ref|YP_004125835.1| ribosomal protein l28 [Alicycliphilus denitrificans BC] gi|330826250|ref|YP_004389553.1| 50S ribosomal protein L28 [Alicycliphilus denitrificans K601] gi|166226533|sp|A1WB79|RL28_ACISJ RecName: Full=50S ribosomal protein L28 gi|254801357|sp|B9MEB7|RL28_DIAST RecName: Full=50S ribosomal protein L28 gi|120607764|gb|ABM43504.1| LSU ribosomal protein L28P [Acidovorax sp. JS42] gi|220713811|gb|EED69179.1| ribosomal protein L28 [Comamonas testosteroni KF-1] gi|221731336|gb|ACM34156.1| ribosomal protein L28 [Acidovorax ebreus TPSY] gi|262207531|gb|ACY31629.1| ribosomal protein L28 [Comamonas testosteroni CNB-2] gi|298719508|gb|EFI60475.1| 50S ribosomal protein L28 [Comamonas testosteroni S44] gi|317116459|gb|ADU98947.1| ribosomal protein L28 [Alicycliphilus denitrificans BC] gi|329311622|gb|AEB86037.1| 50S ribosomal protein L28 [Alicycliphilus denitrificans K601] Length = 77 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADMRAR 74 >gi|91789646|ref|YP_550598.1| 50S ribosomal protein L28 [Polaromonas sp. JS666] gi|123355325|sp|Q125U2|RL28_POLSJ RecName: Full=50S ribosomal protein L28 gi|91698871|gb|ABE45700.1| LSU ribosomal protein L28P [Polaromonas sp. JS666] Length = 77 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRF+PNL + + +LRI+ LR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFMPNLQYRRFWVESENRWVRLRITSAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDAILVDLRAR 74 >gi|117924123|ref|YP_864740.1| 50S ribosomal protein L28P [Magnetococcus sp. MC-1] gi|166226586|sp|A0L5U1|RL28_MAGSM RecName: Full=50S ribosomal protein L28 gi|117607879|gb|ABK43334.1| LSU ribosomal protein L28P [Magnetococcus sp. MC-1] Length = 95 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 53/95 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R L K +GNKVSH+ KTRR+++PN+ L S + Q ++ IS ALRSV+ Sbjct: 1 MARKRTLGGKAPQAGNKVSHSQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 GGLD +L L+ MR + QI ++ + Sbjct: 61 NAGGLDNYLLKILPSELTPSMRRVARQIRERKAAA 95 >gi|160900797|ref|YP_001566379.1| 50S ribosomal protein L28 [Delftia acidovorans SPH-1] gi|226738065|sp|A9BNU9|RL28_DELAS RecName: Full=50S ribosomal protein L28 gi|160366381|gb|ABX37994.1| ribosomal protein L28 [Delftia acidovorans SPH-1] Length = 77 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADLRAR 74 >gi|42520268|ref|NP_966183.1| 50S ribosomal protein L28 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58700226|ref|ZP_00374712.1| ribosomal protein L28-related protein [Wolbachia endosymbiont of Drosophila ananassae] gi|99034408|ref|ZP_01314419.1| hypothetical protein Wendoof_01000778 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225630197|ref|YP_002726988.1| ribosomal protein L28 [Wolbachia sp. wRi] gi|225677014|ref|ZP_03788027.1| ribosomal protein L28 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|67461471|sp|Q73HZ5|RL28_WOLPM RecName: Full=50S ribosomal protein L28 gi|42410006|gb|AAS14117.1| ribosomal protein L28 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58533257|gb|EAL57770.1| ribosomal protein L28-related protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225590940|gb|EEH12154.1| ribosomal protein L28 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225592178|gb|ACN95197.1| ribosomal protein L28 [Wolbachia sp. wRi] Length = 104 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT + GNKVSH+N KT+R FL NL ++TL SDI+ +K++ R++ LR+++ Sbjct: 1 MSRVCELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSDILNKKFRFRVATRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +G LD FL N++ LS + + ++ ++ K + ++ Sbjct: 61 YKGDLDAFLLNTRTIKLSEKAQKIKRRLKKVLVKQ 95 >gi|120612081|ref|YP_971759.1| 50S ribosomal protein L28 [Acidovorax citrulli AAC00-1] gi|241765340|ref|ZP_04763316.1| ribosomal protein L28 [Acidovorax delafieldii 2AN] gi|326318090|ref|YP_004235762.1| 50S ribosomal protein L28 [Acidovorax avenae subsp. avenae ATCC 19860] gi|166226528|sp|A1TSP7|RL28_ACIAC RecName: Full=50S ribosomal protein L28 gi|120590545|gb|ABM33985.1| LSU ribosomal protein L28P [Acidovorax citrulli AAC00-1] gi|241364939|gb|EER59877.1| ribosomal protein L28 [Acidovorax delafieldii 2AN] gi|323374926|gb|ADX47195.1| 50S ribosomal protein L28 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 77 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCDVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADLRAR 74 >gi|126733276|ref|ZP_01749023.1| ribosomal protein L28 [Roseobacter sp. CCS2] gi|126716142|gb|EBA13006.1| ribosomal protein L28 [Roseobacter sp. CCS2] Length = 82 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 55/82 (67%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHA N+TRRRFLPNL +TL SD + + ++ +IS ALR+V+ +GGLD F++ + Sbjct: 1 MSGNNVSHAKNRTRRRFLPNLQDVTLQSDTLGRSFKFKISNAALRTVDHRGGLDAFMAKA 60 Query: 73 KKENLSARMRTLRSQILKKMSE 94 K LS ++ +I K + Sbjct: 61 KDAELSDNALKVKKEIAKATAA 82 >gi|53718557|ref|YP_107543.1| 50S ribosomal protein L28 [Burkholderia pseudomallei K96243] gi|53726240|ref|YP_103795.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 23344] gi|76810126|ref|YP_332549.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710b] gi|78067303|ref|YP_370072.1| 50S ribosomal protein L28 [Burkholderia sp. 383] gi|83720970|ref|YP_441336.1| 50S ribosomal protein L28 [Burkholderia thailandensis E264] gi|107023440|ref|YP_621767.1| 50S ribosomal protein L28 [Burkholderia cenocepacia AU 1054] gi|115352600|ref|YP_774439.1| 50S ribosomal protein L28 [Burkholderia ambifaria AMMD] gi|116690522|ref|YP_836145.1| 50S ribosomal protein L28 [Burkholderia cenocepacia HI2424] gi|124384182|ref|YP_001027008.1| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10229] gi|126440334|ref|YP_001058029.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 668] gi|126452424|ref|YP_001065264.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106a] gi|134296675|ref|YP_001120410.1| 50S ribosomal protein L28 [Burkholderia vietnamiensis G4] gi|161523973|ref|YP_001578985.1| 50S ribosomal protein L28 [Burkholderia multivorans ATCC 17616] gi|167561867|ref|ZP_02354783.1| 50S ribosomal protein L28 [Burkholderia oklahomensis EO147] gi|167569089|ref|ZP_02361963.1| 50S ribosomal protein L28 [Burkholderia oklahomensis C6786] gi|167580121|ref|ZP_02372995.1| 50S ribosomal protein L28 [Burkholderia thailandensis TXDOH] gi|167585718|ref|ZP_02378106.1| 50S ribosomal protein L28 [Burkholderia ubonensis Bu] gi|167618185|ref|ZP_02386816.1| 50S ribosomal protein L28 [Burkholderia thailandensis Bt4] gi|167718468|ref|ZP_02401704.1| 50S ribosomal protein L28 [Burkholderia pseudomallei DM98] gi|167737517|ref|ZP_02410291.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 14] gi|167814636|ref|ZP_02446316.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 91] gi|167823104|ref|ZP_02454575.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 9] gi|167835744|ref|ZP_02462627.1| 50S ribosomal protein L28 [Burkholderia thailandensis MSMB43] gi|167844667|ref|ZP_02470175.1| 50S ribosomal protein L28 [Burkholderia pseudomallei B7210] gi|167893196|ref|ZP_02480598.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 7894] gi|167901649|ref|ZP_02488854.1| 50S ribosomal protein L28 [Burkholderia pseudomallei NCTC 13177] gi|167909899|ref|ZP_02496990.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 112] gi|167917921|ref|ZP_02505012.1| 50S ribosomal protein L28 [Burkholderia pseudomallei BCC215] gi|170697689|ref|ZP_02888777.1| ribosomal protein L28 [Burkholderia ambifaria IOP40-10] gi|170733863|ref|YP_001765810.1| 50S ribosomal protein L28 [Burkholderia cenocepacia MC0-3] gi|171316764|ref|ZP_02905976.1| ribosomal protein L28 [Burkholderia ambifaria MEX-5] gi|172061462|ref|YP_001809114.1| 50S ribosomal protein L28 [Burkholderia ambifaria MC40-6] gi|186475351|ref|YP_001856821.1| 50S ribosomal protein L28 [Burkholderia phymatum STM815] gi|189351266|ref|YP_001946894.1| 50S ribosomal protein L28 [Burkholderia multivorans ATCC 17616] gi|206561052|ref|YP_002231817.1| 50S ribosomal protein L28 [Burkholderia cenocepacia J2315] gi|221199268|ref|ZP_03572312.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2M] gi|221205830|ref|ZP_03578845.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2] gi|221211488|ref|ZP_03584467.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD1] gi|238028404|ref|YP_002912635.1| 50S ribosomal protein L28 [Burkholderia glumae BGR1] gi|254175666|ref|ZP_04882326.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 10399] gi|254181485|ref|ZP_04888082.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1655] gi|254190873|ref|ZP_04897380.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pasteur 52237] gi|254202497|ref|ZP_04908860.1| 50S ribosomal protein L28 [Burkholderia mallei FMH] gi|254207832|ref|ZP_04914182.1| 50S ribosomal protein L28 [Burkholderia mallei JHU] gi|254247436|ref|ZP_04940757.1| ribosomal protein L28 [Burkholderia cenocepacia PC184] gi|254251633|ref|ZP_04944951.1| RL28_BLOFL 50S ribosomal protein L28 [Burkholderia dolosa AUO158] gi|254356273|ref|ZP_04972549.1| 50S ribosomal protein L28 [Burkholderia mallei 2002721280] gi|257139990|ref|ZP_05588252.1| ribosomal protein L28 [Burkholderia thailandensis E264] gi|330818062|ref|YP_004361767.1| 50S ribosomal protein L28 [Burkholderia gladioli BSR3] gi|67461359|sp|Q62HM5|RL28_BURMA RecName: Full=50S ribosomal protein L28 gi|67461365|sp|Q63WH3|RL28_BURPS RecName: Full=50S ribosomal protein L28 gi|122322428|sp|Q0BCL8|RL28_BURCM RecName: Full=50S ribosomal protein L28 gi|123371366|sp|Q1BUB1|RL28_BURCA RecName: Full=50S ribosomal protein L28 gi|123537847|sp|Q2T0G3|RL28_BURTA RecName: Full=50S ribosomal protein L28 gi|123567820|sp|Q39DN8|RL28_BURS3 RecName: Full=50S ribosomal protein L28 gi|123599996|sp|Q3JV54|RL28_BURP1 RecName: Full=50S ribosomal protein L28 gi|166226550|sp|A0K9S5|RL28_BURCH RecName: Full=50S ribosomal protein L28 gi|166226551|sp|A2S4Y9|RL28_BURM9 RecName: Full=50S ribosomal protein L28 gi|166226552|sp|A3NSE3|RL28_BURP0 RecName: Full=50S ribosomal protein L28 gi|166226553|sp|A3N6Q8|RL28_BURP6 RecName: Full=50S ribosomal protein L28 gi|166226554|sp|A4JH22|RL28_BURVG RecName: Full=50S ribosomal protein L28 gi|226738041|sp|B1YV94|RL28_BURA4 RecName: Full=50S ribosomal protein L28 gi|226738042|sp|B1JXB3|RL28_BURCC RecName: Full=50S ribosomal protein L28 gi|226738043|sp|B4E8Y7|RL28_BURCJ RecName: Full=50S ribosomal protein L28 gi|226738044|sp|A9AHD5|RL28_BURM1 RecName: Full=50S ribosomal protein L28 gi|226738045|sp|B2JDZ9|RL28_BURP8 RecName: Full=50S ribosomal protein L28 gi|52208971|emb|CAH34910.1| 50S ribosomal protein L28 [Burkholderia pseudomallei K96243] gi|52429663|gb|AAU50256.1| ribosomal protein L28 [Burkholderia mallei ATCC 23344] gi|76579579|gb|ABA49054.1| RpmB protein [Burkholderia pseudomallei 1710b] gi|77968048|gb|ABB09428.1| LSU ribosomal protein L28P [Burkholderia sp. 383] gi|83654795|gb|ABC38858.1| ribosomal protein L28, putative [Burkholderia thailandensis E264] gi|105893629|gb|ABF76794.1| LSU ribosomal protein L28P [Burkholderia cenocepacia AU 1054] gi|115282588|gb|ABI88105.1| LSU ribosomal protein L28P [Burkholderia ambifaria AMMD] gi|116648611|gb|ABK09252.1| LSU ribosomal protein L28P [Burkholderia cenocepacia HI2424] gi|124292202|gb|ABN01471.1| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10229] gi|124872212|gb|EAY63928.1| ribosomal protein L28 [Burkholderia cenocepacia PC184] gi|124894242|gb|EAY68122.1| RL28_BLOFL 50S ribosomal protein L28 [Burkholderia dolosa AUO158] gi|126219827|gb|ABN83333.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 668] gi|126226066|gb|ABN89606.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106a] gi|134139832|gb|ABO55575.1| LSU ribosomal protein L28P [Burkholderia vietnamiensis G4] gi|147746744|gb|EDK53821.1| 50S ribosomal protein L28 [Burkholderia mallei FMH] gi|147751726|gb|EDK58793.1| 50S ribosomal protein L28 [Burkholderia mallei JHU] gi|148025270|gb|EDK83424.1| 50S ribosomal protein L28 [Burkholderia mallei 2002721280] gi|157938548|gb|EDO94218.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pasteur 52237] gi|160341402|gb|ABX14488.1| ribosomal protein L28 [Burkholderia multivorans ATCC 17616] gi|160696710|gb|EDP86680.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 10399] gi|169817105|gb|ACA91688.1| ribosomal protein L28 [Burkholderia cenocepacia MC0-3] gi|170137437|gb|EDT05677.1| ribosomal protein L28 [Burkholderia ambifaria IOP40-10] gi|171098114|gb|EDT42929.1| ribosomal protein L28 [Burkholderia ambifaria MEX-5] gi|171993979|gb|ACB64898.1| ribosomal protein L28 [Burkholderia ambifaria MC40-6] gi|184191810|gb|ACC69775.1| ribosomal protein L28 [Burkholderia phymatum STM815] gi|184212023|gb|EDU09066.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1655] gi|189335288|dbj|BAG44358.1| large subunit ribosomal protein L28 [Burkholderia multivorans ATCC 17616] gi|198037094|emb|CAR53015.1| 50S ribosomal protein L28 [Burkholderia cenocepacia J2315] gi|221168849|gb|EEE01317.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD1] gi|221174668|gb|EEE07100.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2] gi|221180553|gb|EEE12956.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2M] gi|237877598|gb|ACR29931.1| 50S ribosomal protein L28 [Burkholderia glumae BGR1] gi|325528991|gb|EGD06010.1| ribosomal protein L28 [Burkholderia sp. TJI49] gi|327370455|gb|AEA61811.1| 50S ribosomal protein L28 [Burkholderia gladioli BSR3] Length = 77 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADLRAR 74 >gi|17547164|ref|NP_520566.1| 50S ribosomal protein L28 [Ralstonia solanacearum GMI1000] gi|83746660|ref|ZP_00943709.1| LSU ribosomal protein L28P [Ralstonia solanacearum UW551] gi|300690690|ref|YP_003751685.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum PSI07] gi|300703308|ref|YP_003744910.1| 50S ribosomal protein L28 [Ralstonia solanacearum CFBP2957] gi|20139460|sp|Q8XWM9|RL28_RALSO RecName: Full=50S ribosomal protein L28 gi|17429466|emb|CAD16152.1| probable 50s ribosomal protein l28 [Ralstonia solanacearum GMI1000] gi|83726613|gb|EAP73742.1| LSU ribosomal protein L28P [Ralstonia solanacearum UW551] gi|299065958|emb|CBJ37139.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum CMR15] gi|299070971|emb|CBJ42280.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum CFBP2957] gi|299077750|emb|CBJ50388.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum PSI07] Length = 77 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDEVLADLRAR 74 >gi|91784963|ref|YP_560169.1| 50S ribosomal protein L28 [Burkholderia xenovorans LB400] gi|209517443|ref|ZP_03266284.1| ribosomal protein L28 [Burkholderia sp. H160] gi|296157155|ref|ZP_06839991.1| ribosomal protein L28 [Burkholderia sp. Ch1-1] gi|123358513|sp|Q13UX2|RL28_BURXL RecName: Full=50S ribosomal protein L28 gi|91688917|gb|ABE32117.1| LSU ribosomal protein L28P [Burkholderia xenovorans LB400] gi|209502097|gb|EEA02112.1| ribosomal protein L28 [Burkholderia sp. H160] gi|295892491|gb|EFG72273.1| ribosomal protein L28 [Burkholderia sp. Ch1-1] Length = 77 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + + +LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRIWVESENRWVRLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|319941938|ref|ZP_08016259.1| ribosomal protein L28 [Sutterella wadsworthensis 3_1_45B] gi|319804591|gb|EFW01461.1| ribosomal protein L28 [Sutterella wadsworthensis 3_1_45B] Length = 77 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M G++VSHANNKT+RRF+PNL + + +LR++ LR+V+ Sbjct: 1 MARVCQVTGKAPMVGHQVSHANNKTKRRFMPNLQYRRFWVESENRWVRLRLTNAGLRTVD 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KLG-IDAVLADLRAR 74 >gi|187929783|ref|YP_001900270.1| 50S ribosomal protein L28 [Ralstonia pickettii 12J] gi|241663909|ref|YP_002982269.1| 50S ribosomal protein L28 [Ralstonia pickettii 12D] gi|309781501|ref|ZP_07676237.1| ribosomal protein L28 [Ralstonia sp. 5_7_47FAA] gi|226699151|sp|B2UAP1|RL28_RALPJ RecName: Full=50S ribosomal protein L28 gi|187726673|gb|ACD27838.1| ribosomal protein L28 [Ralstonia pickettii 12J] gi|240865936|gb|ACS63597.1| ribosomal protein L28 [Ralstonia pickettii 12D] gi|308919914|gb|EFP65575.1| ribosomal protein L28 [Ralstonia sp. 5_7_47FAA] Length = 77 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDEVLVDLRAR 74 >gi|88657876|ref|YP_507300.1| 50S ribosomal protein L28 [Ehrlichia chaffeensis str. Arkansas] gi|123493481|sp|Q2GGY3|RL28_EHRCR RecName: Full=50S ribosomal protein L28 gi|88599333|gb|ABD44802.1| 50S ribosomal protein L28 [Ehrlichia chaffeensis str. Arkansas] Length = 100 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 63/94 (67%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T + GNKVSH+N KT+R +L NL +TL+SDI+ +K++ ++S LR+V Sbjct: 1 MSRVCDITGQGKSFGNKVSHSNRKTKRAYLVNLHNVTLVSDILNRKFKFKVSSRTLRTVN 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 +GGLD +L N+ L+ + + ++ + +++ Sbjct: 61 YKGGLDLYLLNTSSRKLTDKAQKIKKLVKNAVAK 94 >gi|262277628|ref|ZP_06055421.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB114] gi|262224731|gb|EEY75190.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB114] Length = 97 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 73/97 (75%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ +CELT K MSG+KVSHANNKT+R+F PNL +++L S+++++ L+IS AL++V+ Sbjct: 1 MANICELTGKRPMSGHKVSHANNKTKRKFFPNLKKVSLKSELLKKNVSLKISTRALKAVD 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 +GGLD+FL +K +NL+ R++ L+ ++ K K++ Sbjct: 61 FRGGLDQFLIRAKNKNLAPRIKKLKKALMVKTKAKAN 97 >gi|303257739|ref|ZP_07343751.1| ribosomal protein L28 [Burkholderiales bacterium 1_1_47] gi|331000392|ref|ZP_08324070.1| ribosomal protein L28 [Parasutterella excrementihominis YIT 11859] gi|302859709|gb|EFL82788.1| ribosomal protein L28 [Burkholderiales bacterium 1_1_47] gi|329571944|gb|EGG53618.1| ribosomal protein L28 [Parasutterella excrementihominis YIT 11859] Length = 77 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN+VSHANNKT+RRF+PNL + + +LR++ ALR+++ Sbjct: 1 MARVCQVTGKAPMVGNRVSHANNKTKRRFMPNLQYRRFWVESENRWVRLRVTNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 61 KNG-IEAVLADLRAR 74 >gi|312795309|ref|YP_004028231.1| LSU ribosomal protein L28P [Burkholderia rhizoxinica HKI 454] gi|312167084|emb|CBW74087.1| LSU ribosomal protein L28P [Burkholderia rhizoxinica HKI 454] Length = 98 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C++T K M GN VSHANNKT+RRFLPNL + + +LR+S LR ++ Sbjct: 22 MARKCQVTGKAPMVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAGLRLID 81 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 82 KNG-IDPVLADLRAR 95 >gi|332530913|ref|ZP_08406837.1| 50S ribosomal protein L28 [Hylemonella gracilis ATCC 19624] gi|332039601|gb|EGI76003.1| 50S ribosomal protein L28 [Hylemonella gracilis ATCC 19624] Length = 77 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GN +SHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCEVTGKKPMVGNNISHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADLRAR 74 >gi|89901949|ref|YP_524420.1| 50S ribosomal protein L28 [Rhodoferax ferrireducens T118] gi|122478563|sp|Q21TL4|RL28_RHOFD RecName: Full=50S ribosomal protein L28 gi|89346686|gb|ABD70889.1| LSU ribosomal protein L28P [Rhodoferax ferrireducens T118] Length = 77 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GNKVSHANN+T+RRFLPNL + + +LRIS LR ++ Sbjct: 1 MARVCEVTGKGPMVGNKVSHANNRTKRRFLPNLQYRRFWVETENRWIRLRISNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDVVLADLRAR 74 >gi|94311802|ref|YP_585012.1| 50S ribosomal protein L28 [Cupriavidus metallidurans CH34] gi|166226608|sp|Q1LJD3|RL28_RALME RecName: Full=50S ribosomal protein L28 gi|93355654|gb|ABF09743.1| 50S ribosomal subunit protein L28 [Cupriavidus metallidurans CH34] Length = 77 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLRAR 74 >gi|242219285|ref|XP_002475424.1| mitochondrial 50S ribosomal protein L28-like protein [Postia placenta Mad-698-R] gi|220725395|gb|EED79384.1| mitochondrial 50S ribosomal protein L28-like protein [Postia placenta Mad-698-R] Length = 124 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 48/88 (54%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K GN V + KTRR +LPN+ SD +++ Q+++S AL+++ + GG+D + Sbjct: 26 GKMKQYGNNVPFSMQKTRRTWLPNIQNKRFFSDALQEFVQVKVSTRALKTINKYGGIDTY 85 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEKS 96 L +K + L LR + +++S + Sbjct: 86 LLKTKSDLLGWEGMRLRIMVRERISSRQ 113 >gi|254780584|ref|YP_003064997.1| 50S ribosomal protein L28 [Candidatus Liberibacter asiaticus str. psy62] gi|254040261|gb|ACT57057.1| 50S ribosomal protein L28 [Candidatus Liberibacter asiaticus str. psy62] Length = 97 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 97/97 (100%), Positives = 97/97 (100%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE Sbjct: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS Sbjct: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 >gi|91774668|ref|YP_544424.1| 50S ribosomal protein L28P [Methylobacillus flagellatus KT] gi|253998048|ref|YP_003050111.1| 50S ribosomal protein L28 [Methylovorus sp. SIP3-4] gi|313200113|ref|YP_004038771.1| 50S ribosomal protein L28 [Methylovorus sp. MP688] gi|122400322|sp|Q1H4K4|RL28_METFK RecName: Full=50S ribosomal protein L28 gi|91708655|gb|ABE48583.1| LSU ribosomal protein L28P [Methylobacillus flagellatus KT] gi|253984727|gb|ACT49584.1| ribosomal protein L28 [Methylovorus sp. SIP3-4] gi|312439429|gb|ADQ83535.1| ribosomal protein L28 [Methylovorus sp. MP688] Length = 78 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + LRI+ ALR+++ Sbjct: 1 MARVCQVTGKKPMVGNNVSHANNKTKRRFLPNLQNRKFWVESENRWVSLRITNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAS 74 >gi|254494553|ref|ZP_05107724.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 1291] gi|268604467|ref|ZP_06138634.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID1] gi|226513593|gb|EEH62938.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 1291] gi|268588598|gb|EEZ53274.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID1] Length = 117 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 41 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 100 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 101 KVG-IDVVLADLRAR 114 >gi|301629813|ref|XP_002944028.1| PREDICTED: 50S ribosomal protein L28-like [Xenopus (Silurana) tropicalis] Length = 90 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M GNKVSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 14 MARVCEVTGKKPMVGNKVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLID 73 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 74 KNG-IESVLADMRAR 87 >gi|226939473|ref|YP_002794546.1| 50S ribosomal protein L28 [Laribacter hongkongensis HLHK9] gi|254801365|sp|C1DCC0|RL28_LARHH RecName: Full=50S ribosomal protein L28 gi|226714399|gb|ACO73537.1| RpmB [Laribacter hongkongensis HLHK9] Length = 77 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + ++R+S ALR+++ Sbjct: 1 MARVCKVTGKRPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRMRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KVG-IDAVLADLRAR 74 >gi|289613675|emb|CBI59423.1| unnamed protein product [Sordaria macrospora] Length = 266 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%) Query: 12 VMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 + GN VS N KTRR++ PN+ + L S + + R++ LR++++ GGLD +L Sbjct: 96 IRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLL 155 Query: 71 N---SKKENLSARMRTLRSQILKKMSEK 95 ++ + L LR +I++ + + Sbjct: 156 GHKAARVKELGPWGWMLRWRIMQTPAVR 183 >gi|255719428|ref|XP_002555994.1| KLTH0H02618p [Lachancea thermotolerans] gi|238941960|emb|CAR30132.1| KLTH0H02618p [Lachancea thermotolerans] Length = 273 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + GN V+ + KTRRR+LPN+ + L S+ + + +R++ LR+V ++GG+D + Sbjct: 91 GSFIQYGNNVAESKTKTRRRWLPNVIKKGLWSEALSRNVSIRMTAKVLRTVTKEGGIDNY 150 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSEKSS 97 L+ ++ + L LR ++L++ + + Sbjct: 151 LTKEKSARIKELGPTGWKLRYRVLQRQELREN 182 >gi|170693581|ref|ZP_02884739.1| ribosomal protein L28 [Burkholderia graminis C4D1M] gi|295677433|ref|YP_003605957.1| ribosomal protein L28 [Burkholderia sp. CCGE1002] gi|307730753|ref|YP_003907977.1| 50S ribosomal protein L28 [Burkholderia sp. CCGE1003] gi|323527116|ref|YP_004229269.1| 50S ribosomal protein L28 [Burkholderia sp. CCGE1001] gi|170141363|gb|EDT09533.1| ribosomal protein L28 [Burkholderia graminis C4D1M] gi|295437276|gb|ADG16446.1| ribosomal protein L28 [Burkholderia sp. CCGE1002] gi|307585288|gb|ADN58686.1| ribosomal protein L28 [Burkholderia sp. CCGE1003] gi|323384118|gb|ADX56209.1| ribosomal protein L28 [Burkholderia sp. CCGE1001] Length = 77 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + + +LRIS LR ++ Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQSRRIWVESENRWVRLRISNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|217969674|ref|YP_002354908.1| 50S ribosomal protein L28 [Thauera sp. MZ1T] gi|217507001|gb|ACK54012.1| ribosomal protein L28 [Thauera sp. MZ1T] Length = 78 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL S+ + +LR+S LR+++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQSRRFWSEGENRWIRLRVSNAGLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G +D ++ L AR L Sbjct: 61 KKG-IDVVVA-----ELRARGEKL 78 >gi|73542418|ref|YP_296938.1| 50S ribosomal protein L28 [Ralstonia eutropha JMP134] gi|113868988|ref|YP_727477.1| 50S ribosomal protein L28 [Ralstonia eutropha H16] gi|194290594|ref|YP_002006501.1| 50S ribosomal protein l28 [Cupriavidus taiwanensis LMG 19424] gi|122946632|sp|Q0K7B2|RL28_RALEH RecName: Full=50S ribosomal protein L28 gi|123624202|sp|Q46XN9|RL28_RALEJ RecName: Full=50S ribosomal protein L28 gi|226738062|sp|B3R6F8|RL28_CUPTR RecName: Full=50S ribosomal protein L28 gi|72119831|gb|AAZ62094.1| LSU ribosomal protein L28P [Ralstonia eutropha JMP134] gi|113527764|emb|CAJ94109.1| LSU ribosomal protein L28 [Ralstonia eutropha H16] gi|193224429|emb|CAQ70440.1| 50S ribosomal subunit protein L28 [Cupriavidus taiwanensis LMG 19424] Length = 77 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLADLRAR 74 >gi|307824752|ref|ZP_07654975.1| ribosomal protein L28 [Methylobacter tundripaludum SV96] gi|307734110|gb|EFO04964.1| ribosomal protein L28 [Methylobacter tundripaludum SV96] Length = 78 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHANN+T+RRF PNL + + +LRIS +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHANNRTKRRFCPNLQHHRFWVESENRWVRLRISTKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLR 72 >gi|319788437|ref|YP_004147912.1| ribosomal protein L28 [Pseudoxanthomonas suwonensis 11-1] gi|317466949|gb|ADV28681.1| ribosomal protein L28 [Pseudoxanthomonas suwonensis 11-1] Length = 78 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K V +GN VSHANNKTRRRFLPNL + +LR+S ALR+++ Sbjct: 1 MSRVCQVTGKGVQTGNNVSHANNKTRRRFLPNLHERRFWVASENRWVKLRVSAAALRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +D L+ L AR + Sbjct: 61 KNG-IDSVLA-----ELRARGEKI 78 >gi|124266309|ref|YP_001020313.1| 50S ribosomal protein L28 [Methylibium petroleiphilum PM1] gi|166226588|sp|A2SET9|RL28_METPP RecName: Full=50S ribosomal protein L28 gi|124259084|gb|ABM94078.1| LSU ribosomal protein L28P [Methylibium petroleiphilum PM1] Length = 77 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR++ ALR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWLETENRWVRLRVTNAALRLID 60 Query: 61 RQG 63 + G Sbjct: 61 KVG 63 >gi|253995750|ref|YP_003047814.1| 50S ribosomal protein L28 [Methylotenera mobilis JLW8] gi|253982429|gb|ACT47287.1| ribosomal protein L28 [Methylotenera mobilis JLW8] Length = 78 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHA NKT+RRFLPNL + + +RI+ ALR+++ Sbjct: 1 MARVCQVTGKKPMVGNNVSHAQNKTKRRFLPNLQNRKFWVESENRWVSMRITNAALRTID 60 Query: 61 RQGGLDRFLSNSKK 74 + G +D L++ + Sbjct: 61 KNG-IDAVLADMRA 73 >gi|104784326|ref|YP_610824.1| 50S ribosomal protein L28 [Pseudomonas entomophila L48] gi|122401257|sp|Q1I2U5|RL28_PSEE4 RecName: Full=50S ribosomal protein L28 gi|95113313|emb|CAK18041.1| 50S ribosomal protein L28 [Pseudomonas entomophila L48] Length = 78 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESENRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L + + Sbjct: 61 KRG-IDAVLVDIR 72 >gi|152983116|ref|YP_001354242.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille] gi|151283193|gb|ABR91603.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille] Length = 112 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + LR+S LR ++ Sbjct: 35 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVID 94 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 95 KIG-IDAVLADMRAR 108 >gi|296840760|ref|ZP_06899339.1| 50S ribosomal subunit protein L28 [Neisseria polysaccharea ATCC 43768] gi|296840040|gb|EFH23978.1| 50S ribosomal subunit protein L28 [Neisseria polysaccharea ATCC 43768] Length = 99 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 23 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 82 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 83 KVG-IDVVLADLRAR 96 >gi|329890834|ref|ZP_08269177.1| 50S ribosomal protein L28 [Brevundimonas diminuta ATCC 11568] gi|328846135|gb|EGF95699.1| 50S ribosomal protein L28 [Brevundimonas diminuta ATCC 11568] Length = 86 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 57/85 (67%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M G+ VSH+N KT+RRFLP L + + S+ + Q + LRIS ALR+++ +GGLD F+ + Sbjct: 1 MVGHHVSHSNIKTKRRFLPALKTVKVQSEALGQTFSLRISNAALRTLDFKGGLDAFIVKA 60 Query: 73 KKENLSARMRTLRSQILKKMSEKSS 97 + E LS ++ Q+ K++E+++ Sbjct: 61 RDEQLSIAALRIKRQVRAKLAEQAA 85 >gi|147865450|emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera] Length = 1084 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NKTRR + PN+ L S I+++ +++++ ALR ++ Sbjct: 39 AKRGIYAGRHIQFGNRVSEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCID 98 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + M ++KM E+ Sbjct: 99 KAGGIDEYLLKTPYHKMDTEMGLFWKAKIEKMYEE 133 >gi|71908756|ref|YP_286343.1| 50S ribosomal protein L28 [Dechloromonas aromatica RCB] gi|123626758|sp|Q47BA8|RL28_DECAR RecName: Full=50S ribosomal protein L28 gi|71848377|gb|AAZ47873.1| LSU ribosomal protein L28P [Dechloromonas aromatica RCB] Length = 77 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GNKVSHANN+T+RRFLPNL + + +LR+S LR ++ Sbjct: 1 MARVCQVTGKAPMVGNKVSHANNRTKRRFLPNLQYRRFWVESENRFLRLRVSNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|148652401|ref|YP_001279494.1| 50S ribosomal protein L28 [Psychrobacter sp. PRwf-1] gi|172048504|sp|A5WD03|RL28_PSYWF RecName: Full=50S ribosomal protein L28 gi|148571485|gb|ABQ93544.1| LSU ribosomal protein L28P [Psychrobacter sp. PRwf-1] Length = 78 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN VSHA+NKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPQVGNNVSHAHNKTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ L++ + + Sbjct: 61 KHG-IDKVLADLRAK 74 >gi|171057442|ref|YP_001789791.1| 50S ribosomal protein L28 [Leptothrix cholodnii SP-6] gi|226732833|sp|B1Y149|RL28_LEPCP RecName: Full=50S ribosomal protein L28 gi|170774887|gb|ACB33026.1| ribosomal protein L28 [Leptothrix cholodnii SP-6] Length = 77 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LRIS ALR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLHYRRFWLETENRWVRLRISNAALRLID 60 Query: 61 RQG 63 + G Sbjct: 61 KVG 63 >gi|56477979|ref|YP_159568.1| 50S ribosomal protein L28 [Aromatoleum aromaticum EbN1] gi|67461304|sp|Q5P1Z7|RL28_AZOSE RecName: Full=50S ribosomal protein L28 gi|56314022|emb|CAI08667.1| 50S ribosomal protein L28 [Aromatoleum aromaticum EbN1] Length = 78 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL S+ + +LR+S ALR+++ Sbjct: 1 MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFWSESENRWIRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G +D + L AR + Sbjct: 61 KKG-IDVVV-----SELRARGEKV 78 >gi|170719375|ref|YP_001747063.1| 50S ribosomal protein L28 [Pseudomonas putida W619] gi|226699150|sp|B1J4M3|RL28_PSEPW RecName: Full=50S ribosomal protein L28 gi|169757378|gb|ACA70694.1| ribosomal protein L28 [Pseudomonas putida W619] Length = 78 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESENRFVRLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KRG-IDVVLAELRAR 74 >gi|119897427|ref|YP_932640.1| 50S ribosomal protein L28 [Azoarcus sp. BH72] gi|166226540|sp|A1K4J8|RL28_AZOSB RecName: Full=50S ribosomal protein L28 gi|119669840|emb|CAL93753.1| 50S ribosomal protein L28 [Azoarcus sp. BH72] Length = 78 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL S+ + +LR+S ALR+++ Sbjct: 1 MARVCQVTGKAPMVGNHVSHANNKTKRRFLPNLQNRRFWSEAENRWIRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D ++ + Sbjct: 61 KKG-IDVVVAELRAR 74 >gi|85110139|ref|XP_963282.1| hypothetical protein NCU08410 [Neurospora crassa OR74A] gi|164423992|ref|XP_001728109.1| hypothetical protein NCU10866 [Neurospora crassa OR74A] gi|28924956|gb|EAA34046.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|157070322|gb|EDO65018.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 274 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%) Query: 12 VMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 + GN VS N KTRR++ PN+ + L S + + R++ LR++++ GGLD +L Sbjct: 101 IRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLL 160 Query: 71 N---SKKENLSARMRTLRSQILK 90 ++ + L LR +I++ Sbjct: 161 GHKAARVKELGPWGWMLRWRIMQ 183 >gi|34498911|ref|NP_903126.1| 50S ribosomal protein L28 [Chromobacterium violaceum ATCC 12472] gi|67461496|sp|Q7NSH0|RL28_CHRVO RecName: Full=50S ribosomal protein L28 gi|34104760|gb|AAQ61117.1| 50S ribosomal protein L28 [Chromobacterium violaceum ATCC 12472] Length = 77 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M+GN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MARVCKVTGKRPMTGNNVSHANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KVG-IDVVLADLRAR 74 >gi|121999092|ref|YP_001003879.1| ribosomal protein L28 [Halorhodospira halophila SL1] gi|166226580|sp|A1WZG5|RL28_HALHL RecName: Full=50S ribosomal protein L28 gi|121590497|gb|ABM63077.1| LSU ribosomal protein L28P [Halorhodospira halophila SL1] Length = 78 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T +GN VSHANNKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKVCQVTGTRPGTGNNVSHANNKTRRRFLPNLHDHRYWVESENRWVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KRG-IDAVLADMRAR 74 >gi|190570684|ref|YP_001975042.1| ribosomal protein L28 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019068|ref|ZP_03334875.1| ribosomal protein L28 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356956|emb|CAQ54342.1| ribosomal protein L28 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995177|gb|EEB55818.1| ribosomal protein L28 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 104 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT + GNKVSH+N KT+R FL NL ++TL S+I+E+K+ RI+ LR+++ Sbjct: 1 MSRICELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSNILEKKFSFRIATRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +G LD FL N+K LS + ++ ++ K ++++ Sbjct: 61 YKGDLDAFLLNTKTIKLSKEAQKIKRRLKKVLAKQ 95 >gi|71066265|ref|YP_264992.1| 50S ribosomal protein L28 [Psychrobacter arcticus 273-4] gi|93006813|ref|YP_581250.1| 50S ribosomal protein L28 [Psychrobacter cryohalolentis K5] gi|122414948|sp|Q1Q987|RL28_PSYCK RecName: Full=50S ribosomal protein L28 gi|123648080|sp|Q4FR00|RL28_PSYA2 RecName: Full=50S ribosomal protein L28 gi|71039250|gb|AAZ19558.1| LSU ribosomal protein L28P [Psychrobacter arcticus 273-4] gi|92394491|gb|ABE75766.1| LSU ribosomal protein L28P [Psychrobacter cryohalolentis K5] Length = 78 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN VSHANNKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMVGNNVSHANNKTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ L + + + Sbjct: 61 KLG-IDKVLVDLRAQ 74 >gi|198284382|ref|YP_002220703.1| 50S ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667456|ref|YP_002427047.1| ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226738018|sp|B7J7Y4|RL28_ACIF2 RecName: Full=50S ribosomal protein L28 gi|226738019|sp|B5ENA7|RL28_ACIF5 RecName: Full=50S ribosomal protein L28 gi|198248903|gb|ACH84496.1| ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519669|gb|ACK80255.1| ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 78 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M+GN VSHA+NKTRRRFLPNL + + ++R+S +R+++ Sbjct: 1 MSRVCKVTGKKPMAGNNVSHAHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTID 60 Query: 61 RQGGLDRFLSNSKK 74 ++G +D L++ + Sbjct: 61 KKG-IDVVLADLRA 73 >gi|332968532|gb|EGK07593.1| 50S ribosomal protein L28 [Kingella kingae ATCC 23330] Length = 78 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K MSGN VSHANNKT+RRFLPNL + + ++R+S ALR+++ Sbjct: 1 MAKVCKITGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRIRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|58700297|ref|ZP_00374759.1| ribosomal protein L28-related protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533187|gb|EAL57724.1| ribosomal protein L28-related protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 103 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 65/94 (69%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVCELT + GNKVSH+N KT+R FL NL ++TL SDI+ +K++ R++ LR+++ Sbjct: 1 SRVCELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSDILNKKFRFRVATRTLRTIDY 60 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +G LD FL N++ LS + + ++ ++ K + ++ Sbjct: 61 KGDLDAFLLNTRTIKLSEKAQKIKRRLKKVLVKQ 94 >gi|298369464|ref|ZP_06980781.1| ribosomal protein L28 [Neisseria sp. oral taxon 014 str. F0314] gi|298282021|gb|EFI23509.1| ribosomal protein L28 [Neisseria sp. oral taxon 014 str. F0314] Length = 77 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LRIS ALR+++ Sbjct: 1 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRISNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KVG-IDAVLADLRAR 74 >gi|149928584|ref|ZP_01916804.1| ribosomal protein L28 [Limnobacter sp. MED105] gi|149822696|gb|EDM81963.1| ribosomal protein L28 [Limnobacter sp. MED105] Length = 77 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GNKVSHANNKT+RRFLPNL + + +LR++ ALR+++ Sbjct: 1 MARVCQVTGKRPMVGNKVSHANNKTKRRFLPNLQSRKFWVESENRWVRLRLTNNALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58] gi|59802005|ref|YP_208717.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA 1090] gi|121635542|ref|YP_975787.1| 50S ribosomal protein L28 [Neisseria meningitidis FAM18] gi|161870749|ref|YP_001599922.1| 50S ribosomal protein L28 [Neisseria meningitidis 053442] gi|218768902|ref|YP_002343414.1| 50S ribosomal protein L28 [Neisseria meningitidis Z2491] gi|225076598|ref|ZP_03719797.1| hypothetical protein NEIFLAOT_01646 [Neisseria flavescens NRL30031/H210] gi|239999768|ref|ZP_04719692.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 35/02] gi|240014925|ref|ZP_04721838.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI18] gi|240017373|ref|ZP_04723913.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA6140] gi|240081516|ref|ZP_04726059.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA19] gi|240113795|ref|ZP_04728285.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae MS11] gi|240116529|ref|ZP_04730591.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID18] gi|240118753|ref|ZP_04732815.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID1] gi|240121995|ref|ZP_04734957.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID24-1] gi|240124292|ref|ZP_04737248.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID332] gi|240126503|ref|ZP_04739389.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-92-679] gi|240128966|ref|ZP_04741627.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-93-1035] gi|241759287|ref|ZP_04757393.1| ribosomal protein L28 [Neisseria flavescens SK114] gi|254805643|ref|YP_003083864.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha14] gi|255067972|ref|ZP_05319827.1| ribosomal protein L28 [Neisseria sicca ATCC 29256] gi|260439714|ref|ZP_05793530.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI2] gi|261378369|ref|ZP_05982942.1| ribosomal protein L28 [Neisseria cinerea ATCC 14685] gi|261379983|ref|ZP_05984556.1| ribosomal protein L28 [Neisseria subflava NJ9703] gi|268595580|ref|ZP_06129747.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 35/02] gi|268597615|ref|ZP_06131782.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA19] gi|268599866|ref|ZP_06134033.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae MS11] gi|268602201|ref|ZP_06136368.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID18] gi|268682920|ref|ZP_06149782.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID332] gi|268685086|ref|ZP_06151948.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-92-679] gi|268687349|ref|ZP_06154211.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-93-1035] gi|291042961|ref|ZP_06568699.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI2] gi|293398307|ref|ZP_06642498.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae F62] gi|319639310|ref|ZP_07994061.1| 50S ribosomal protein L28 [Neisseria mucosa C102] gi|54039149|sp|P66151|RL28_NEIMB RecName: Full=50S ribosomal protein L28 gi|54041850|sp|P66150|RL28_NEIMA RecName: Full=50S ribosomal protein L28 gi|67461225|sp|Q5F682|RL28_NEIG1 RecName: Full=50S ribosomal protein L28 gi|166226589|sp|A1KVW2|RL28_NEIMF RecName: Full=50S ribosomal protein L28 gi|189029447|sp|A9M300|RL28_NEIM0 RecName: Full=50S ribosomal protein L28 gi|7225542|gb|AAF40766.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58] gi|59718900|gb|AAW90305.1| putative 50S ribosomal protein L28 [Neisseria gonorrhoeae FA 1090] gi|120867248|emb|CAM11017.1| 50S ribosomal protein L28 [Neisseria meningitidis FAM18] gi|121052910|emb|CAM09262.1| 50S ribosomal protein L28 [Neisseria meningitidis Z2491] gi|161596302|gb|ABX73962.1| 50S ribosomal protein L28 [Neisseria meningitidis 053442] gi|224952098|gb|EEG33307.1| hypothetical protein NEIFLAOT_01646 [Neisseria flavescens NRL30031/H210] gi|241320423|gb|EER56720.1| ribosomal protein L28 [Neisseria flavescens SK114] gi|254669185|emb|CBA07933.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha14] gi|255047749|gb|EET43213.1| ribosomal protein L28 [Neisseria sicca ATCC 29256] gi|261391847|emb|CAX49306.1| 50S ribosomal protein L28 [Neisseria meningitidis 8013] gi|268548969|gb|EEZ44387.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 35/02] gi|268551403|gb|EEZ46422.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA19] gi|268583997|gb|EEZ48673.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae MS11] gi|268586332|gb|EEZ51008.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID18] gi|268623204|gb|EEZ55604.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID332] gi|268625370|gb|EEZ57770.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-92-679] gi|268627633|gb|EEZ60033.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-93-1035] gi|269145479|gb|EEZ71897.1| ribosomal protein L28 [Neisseria cinerea ATCC 14685] gi|284797182|gb|EFC52529.1| ribosomal protein L28 [Neisseria subflava NJ9703] gi|291013100|gb|EFE05069.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI2] gi|291611231|gb|EFF40315.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae F62] gi|308388532|gb|ADO30852.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha710] gi|309378671|emb|CBX22742.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|317399494|gb|EFV80164.1| 50S ribosomal protein L28 [Neisseria mucosa C102] gi|319411203|emb|CBY91608.1| 50S ribosomal protein L28 [Neisseria meningitidis WUE 2594] gi|325128907|gb|EGC51761.1| ribosomal protein L28 [Neisseria meningitidis N1568] gi|325133013|gb|EGC55688.1| ribosomal protein L28 [Neisseria meningitidis M6190] gi|325134999|gb|EGC57629.1| ribosomal protein L28 [Neisseria meningitidis M13399] gi|325136897|gb|EGC59494.1| ribosomal protein L28 [Neisseria meningitidis M0579] gi|325139002|gb|EGC61550.1| ribosomal protein L28 [Neisseria meningitidis ES14902] gi|325141046|gb|EGC63551.1| ribosomal protein L28 [Neisseria meningitidis CU385] gi|325145210|gb|EGC67491.1| ribosomal protein L28 [Neisseria meningitidis M01-240013] gi|325198988|gb|ADY94444.1| ribosomal protein L28 [Neisseria meningitidis G2136] gi|325199515|gb|ADY94970.1| ribosomal protein L28 [Neisseria meningitidis H44/76] gi|325202858|gb|ADY98312.1| ribosomal protein L28 [Neisseria meningitidis M01-240149] gi|325203435|gb|ADY98888.1| ribosomal protein L28 [Neisseria meningitidis M01-240355] gi|325205399|gb|ADZ00852.1| ribosomal protein L28 [Neisseria meningitidis M04-240196] gi|325208851|gb|ADZ04303.1| ribosomal protein L28 [Neisseria meningitidis NZ-05/33] Length = 77 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KVG-IDVVLADLRAR 74 >gi|325267099|ref|ZP_08133768.1| 50S ribosomal protein L28 [Kingella denitrificans ATCC 33394] gi|324981452|gb|EGC17095.1| 50S ribosomal protein L28 [Kingella denitrificans ATCC 33394] Length = 78 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K +SGN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MAKVCKITGKRPVSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDAVLADLRAR 74 >gi|225457937|ref|XP_002273919.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302142683|emb|CBI19886.3| unnamed protein product [Vitis vinifera] Length = 216 Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NKTRR + PN+ L S I+++ +++++ ALR ++ Sbjct: 39 AKRGIYAGRHIQFGNRVSEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCID 98 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + M ++KM E+ Sbjct: 99 KAGGIDEYLLKTPYHKMDTEMGLFWKAKIEKMYEE 133 >gi|297537562|ref|YP_003673331.1| 50S ribosomal protein L28 [Methylotenera sp. 301] gi|297256909|gb|ADI28754.1| ribosomal protein L28 [Methylotenera sp. 301] Length = 78 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC +T K M GN VSHANN+T+RRFLPNL + + +RI+ ALR+++ Sbjct: 1 MARVCMVTGKKPMVGNNVSHANNRTKRRFLPNLQNRKFWVESENRWVSMRITNNALRTID 60 Query: 61 RQGGLDRFLSNSKK 74 + G +D L++ + Sbjct: 61 KNG-IDAVLADMRA 73 >gi|220933511|ref|YP_002512410.1| ribosomal protein L28 [Thioalkalivibrio sp. HL-EbGR7] gi|254801385|sp|B8GUR2|RL28_THISH RecName: Full=50S ribosomal protein L28 gi|219994821|gb|ACL71423.1| ribosomal protein L28 [Thioalkalivibrio sp. HL-EbGR7] Length = 78 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K ++GN VSHA+NKTRRRFLPNL + + +LRIS LR ++ Sbjct: 1 MARVCQITGKRPVTGNNVSHAHNKTRRRFLPNLHSHRFWVESENRWVRLRISSKGLRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLRAR 74 >gi|261856607|ref|YP_003263890.1| ribosomal protein L28 [Halothiobacillus neapolitanus c2] gi|261837076|gb|ACX96843.1| ribosomal protein L28 [Halothiobacillus neapolitanus c2] Length = 78 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K GN VSHANNKTRRRFLPNL + + LR+S A+R+++ Sbjct: 1 MARVCQVTGKRPAVGNNVSHANNKTRRRFLPNLHHKRFWVESEGRFVTLRVSTNAIRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G ++ L+ +L AR + Sbjct: 61 KVG-IESVLA-----DLRARGEKV 78 >gi|158929977|gb|ABW82958.1| 50S ribosomal protein L28 [uncultured bacterium pEAF66] Length = 78 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + LR+S LR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L + + Sbjct: 61 KVG-IDAVLVDMRAR 74 >gi|302879482|ref|YP_003848046.1| 50S ribosomal protein L28 [Gallionella capsiferriformans ES-2] gi|302582271|gb|ADL56282.1| ribosomal protein L28 [Gallionella capsiferriformans ES-2] Length = 78 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANN+T+RRFLPNL R + + LR++ LR+++ Sbjct: 1 MARVCQVTGKGPMSGNNVSHANNRTKRRFLPNLQRRRFWVEAENRWVSLRLTNAGLRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 61 KNG-IESVLADMRAR 74 >gi|294789471|ref|ZP_06754707.1| ribosomal protein L28 [Simonsiella muelleri ATCC 29453] gi|294482551|gb|EFG30242.1| ribosomal protein L28 [Simonsiella muelleri ATCC 29453] Length = 78 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K MSGN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MAKVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDVVLADLRAR 74 >gi|171677089|ref|XP_001903496.1| hypothetical protein [Podospora anserina S mat+] gi|170936612|emb|CAP61271.1| unnamed protein product [Podospora anserina S mat+] Length = 366 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%) Query: 11 TVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 T+ GN VS N KTRR + PN+ R L S + Q R++ LR++++ GGLD +L Sbjct: 161 TIRYGNNVSEKNEIKTRRTWRPNVHRKRLFSLSLRTWVQTRLTTRVLRTIDKVGGLDEYL 220 Query: 70 SNSKK---ENLSARMRTLRSQILKKMSEKS 96 K + L LR +I++ + K Sbjct: 221 LGIKPNRIKELGPWGWRLRWRIMQTRAVKQ 250 >gi|300310516|ref|YP_003774608.1| 50S ribosomal protein L28 [Herbaspirillum seropedicae SmR1] gi|300073301|gb|ADJ62700.1| 50S ribosomal subunit L28 protein [Herbaspirillum seropedicae SmR1] Length = 78 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + LR+S LR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +D L+ +L AR + Sbjct: 61 KIG-IDAVLA-----DLRARGEKV 78 >gi|187925123|ref|YP_001896765.1| 50S ribosomal protein L28 [Burkholderia phytofirmans PsJN] gi|226738046|sp|B2T6H7|RL28_BURPP RecName: Full=50S ribosomal protein L28 gi|187716317|gb|ACD17541.1| ribosomal protein L28 [Burkholderia phytofirmans PsJN] Length = 77 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGN VSHANNKT+RRFLPNL + + + +LRIS LR ++ Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQSRRIWVESENRFVRLRISNAGLRLID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLADLRAR 74 >gi|332977907|gb|EGK14655.1| 50S ribosomal protein L28 [Psychrobacter sp. 1501(2011)] Length = 78 Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN VSHA N+TRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPQVGNNVSHALNRTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ L++ + + Sbjct: 61 KHG-IDKVLADLRAK 74 >gi|255019877|ref|ZP_05291952.1| LSU ribosomal protein L28p [Acidithiobacillus caldus ATCC 51756] gi|254970657|gb|EET28144.1| LSU ribosomal protein L28p [Acidithiobacillus caldus ATCC 51756] Length = 78 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M+GN VSHANNKTRRRFLPNL + ++ ++R+S +R+++ Sbjct: 1 MSRVCKITGKKPMAGNNVSHANNKTRRRFLPNLQYHRFWVESEQRWVRMRVSTKGMRTID 60 Query: 61 RQGGLDRFLSNSKK 74 ++G +D L+ + Sbjct: 61 KKG-IDVVLAELRA 73 >gi|134095643|ref|YP_001100718.1| 50S ribosomal protein L28 [Herminiimonas arsenicoxydans] gi|166226581|sp|A4G7W0|RL28_HERAR RecName: Full=50S ribosomal protein L28 gi|133739546|emb|CAL62597.1| 50S ribosomal subunit protein L28 [Herminiimonas arsenicoxydans] Length = 78 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + LR+S LR ++ Sbjct: 1 MARVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L + + Sbjct: 61 KIG-IDAVLVDMRAR 74 >gi|325982098|ref|YP_004294500.1| 50S ribosomal protein L28 [Nitrosomonas sp. AL212] gi|325531617|gb|ADZ26338.1| ribosomal protein L28 [Nitrosomonas sp. AL212] Length = 78 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K MSG+ VSHANNKT+RRFLPNL + + +LR++ ALR+++ Sbjct: 1 MARVCEVTGKKPMSGHNVSHANNKTKRRFLPNLQHRKFWVESENRWIKLRLTNAALRTID 60 Query: 61 RQGGLDRFLSNSK 73 + G +D L + Sbjct: 61 KNG-IDAVLVKMR 72 >gi|74318607|ref|YP_316347.1| 50S ribosomal protein L28 [Thiobacillus denitrificans ATCC 25259] gi|123611211|sp|Q3SFR4|RL28_THIDA RecName: Full=50S ribosomal protein L28 gi|74058102|gb|AAZ98542.1| ribosomal protein L28 [Thiobacillus denitrificans ATCC 25259] Length = 78 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC +T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MARVCVVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 61 KNG-IESVLADLRAR 74 >gi|145589914|ref|YP_001156511.1| ribosomal protein L28 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189029449|sp|A4SZN3|RL28_POLSQ RecName: Full=50S ribosomal protein L28 gi|145048320|gb|ABP34947.1| LSU ribosomal protein L28P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 77 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K M GN VSHANNKT+RRFLPNL + + LR++ LR ++ Sbjct: 1 MAKVCQVTGKKPMVGNNVSHANNKTKRRFLPNLQNRRFWVESENRWISLRLTNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D LS+ + Sbjct: 61 KNG-IDAVLSDLRAR 74 >gi|49082438|gb|AAT50619.1| PA5316 [synthetic construct] Length = 79 Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHA+NKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KRG-IEAVLADLRAR 74 >gi|70734366|ref|YP_263107.1| 50S ribosomal protein L28 [Pseudomonas fluorescens Pf-5] gi|123652040|sp|Q4K3S6|RL28_PSEF5 RecName: Full=50S ribosomal protein L28 gi|68348665|gb|AAY96271.1| ribosomal protein L28 [Pseudomonas fluorescens Pf-5] Length = 78 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L+ + Sbjct: 61 KRG-IDVVLAEIR 72 >gi|225682598|gb|EEH20882.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb03] gi|226290013|gb|EEH45497.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb18] Length = 203 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + +L+++ LR++++ GGLD Sbjct: 73 GSTIQFGNKISKGRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTHRVLRTIKKVGGLD 132 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + + Sbjct: 133 QYLLGDKPARIKELGVFGWKLRWKVMQSKAMR 164 >gi|226946811|ref|YP_002801884.1| 50S ribosomal protein L28 [Azotobacter vinelandii DJ] gi|259646727|sp|C1DK04|RL28_AZOVD RecName: Full=50S ribosomal protein L28 gi|226721738|gb|ACO80909.1| ribosomal protein L28 [Azotobacter vinelandii DJ] Length = 78 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KRG-IDVVLAELRAR 74 >gi|255646903|gb|ACU23921.1| unknown [Glycine max] Length = 235 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ K + GN+VS NK+RR + PN+ L S I+++ +++++ ALR ++ Sbjct: 43 AKRGLFAGKHIQFGNRVSEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCID 102 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + M L ++K+ E+ Sbjct: 103 KAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEE 137 >gi|291613167|ref|YP_003523324.1| ribosomal protein L28 [Sideroxydans lithotrophicus ES-1] gi|291583279|gb|ADE10937.1| ribosomal protein L28 [Sideroxydans lithotrophicus ES-1] Length = 78 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN +SHANNKT+RRFLPNL R L + + LR++ ALR+++ Sbjct: 1 MARVCQVTGKKPMVGNNISHANNKTKRRFLPNLQRRRLWVESENRWVSLRLTNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L + Sbjct: 61 KNG-IDAVLFEMRAR 74 >gi|30249436|ref|NP_841506.1| 50S ribosomal protein L28 [Nitrosomonas europaea ATCC 19718] gi|67461512|sp|Q82UL8|RL28_NITEU RecName: Full=50S ribosomal protein L28 gi|30138799|emb|CAD85376.1| Ribosomal protein L28 [Nitrosomonas europaea ATCC 19718] Length = 78 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSG+ VSHANNKT+RRFLPNL + + +LR++ ALR+V+ Sbjct: 1 MARVCQVTGKRPMSGHNVSHANNKTKRRFLPNLQSRRFWLESENRWIRLRLTNAALRTVD 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D +++ + Sbjct: 61 KNG-IDSVVADMRAR 74 >gi|114330794|ref|YP_747016.1| 50S ribosomal protein L28 [Nitrosomonas eutropha C91] gi|122314268|sp|Q0AHY1|RL28_NITEC RecName: Full=50S ribosomal protein L28 gi|114307808|gb|ABI59051.1| LSU ribosomal protein L28P [Nitrosomonas eutropha C91] Length = 78 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSG+ VSHANNKT+RRFLPNL + + +LR++ ALR+++ Sbjct: 1 MARVCQVTGKRPMSGHHVSHANNKTKRRFLPNLQSRRFWLESENRWIRLRLTNAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D +++ + Sbjct: 61 KNG-IDVVIADMRAR 74 >gi|45198359|ref|NP_985388.1| AFL162Cp [Ashbya gossypii ATCC 10895] gi|44984246|gb|AAS53212.1| AFL162Cp [Ashbya gossypii ATCC 10895] Length = 261 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 3/92 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + GN +S + KTRR +LPN+ R +L S+ +++ +++++ LR++ ++GGLD + Sbjct: 79 GSFIQFGNNISESKTKTRRTWLPNIVRKSLWSEALQKDVRIKLTAKVLRTISKEGGLDNY 138 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSEKSS 97 L+ ++ + L + LR ++L + + Sbjct: 139 LTKDKSARIKELGPKGWELRYRVLVARERQLN 170 >gi|26991958|ref|NP_747383.1| 50S ribosomal protein L28 [Pseudomonas putida KT2440] gi|148550392|ref|YP_001270494.1| 50S ribosomal protein L28 [Pseudomonas putida F1] gi|167036319|ref|YP_001671550.1| 50S ribosomal protein L28 [Pseudomonas putida GB-1] gi|325273179|ref|ZP_08139469.1| 50S ribosomal protein L28 [Pseudomonas sp. TJI-51] gi|38258487|sp|Q88C99|RL28_PSEPK RecName: Full=50S ribosomal protein L28 gi|166226605|sp|A5WB00|RL28_PSEP1 RecName: Full=50S ribosomal protein L28 gi|189029451|sp|B0KQ85|RL28_PSEPG RecName: Full=50S ribosomal protein L28 gi|24987087|gb|AAN70847.1|AE016729_5 ribosomal protein L28 [Pseudomonas putida KT2440] gi|148514450|gb|ABQ81310.1| LSU ribosomal protein L28P [Pseudomonas putida F1] gi|166862807|gb|ABZ01215.1| ribosomal protein L28 [Pseudomonas putida GB-1] gi|313501257|gb|ADR62623.1| RpmB [Pseudomonas putida BIRD-1] gi|324101686|gb|EGB99242.1| 50S ribosomal protein L28 [Pseudomonas sp. TJI-51] Length = 78 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L + + Sbjct: 61 KRG-IDAVLVDIR 72 >gi|237747513|ref|ZP_04577993.1| LSU ribosomal protein L28P [Oxalobacter formigenes OXCC13] gi|229380956|gb|EEO31047.1| LSU ribosomal protein L28P [Oxalobacter formigenes OXCC13] Length = 78 Score = 97.0 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGNKVSHANNKTRRRF+PNL + + LR+S LR ++ Sbjct: 1 MARVCQITGKKPMSGNKVSHANNKTRRRFMPNLHYRRFFVESENRWVSLRVSNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KLG-IDAVLADLRAR 74 >gi|15600509|ref|NP_254003.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa PAO1] gi|116053463|ref|YP_793790.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa UCBPP-PA14] gi|152989167|ref|YP_001351408.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa PA7] gi|218894419|ref|YP_002443289.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa LESB58] gi|254237990|ref|ZP_04931313.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa C3719] gi|254243798|ref|ZP_04937120.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa 2192] gi|296392175|ref|ZP_06881650.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa PAb1] gi|313106742|ref|ZP_07792959.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa 39016] gi|14195125|sp|Q9HTN8|RL28_PSEAE RecName: Full=50S ribosomal protein L28 gi|122256516|sp|Q02E46|RL28_PSEAB RecName: Full=50S ribosomal protein L28 gi|166226603|sp|A6VEC3|RL28_PSEA7 RecName: Full=50S ribosomal protein L28 gi|226699149|sp|B7V5K7|RL28_PSEA8 RecName: Full=50S ribosomal protein L28 gi|9951633|gb|AAG08701.1|AE004944_5 50S ribosomal protein L28 [Pseudomonas aeruginosa PAO1] gi|115588684|gb|ABJ14699.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa UCBPP-PA14] gi|126169921|gb|EAZ55432.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa C3719] gi|126197176|gb|EAZ61239.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa 2192] gi|150964325|gb|ABR86350.1| ribosomal protein L28 [Pseudomonas aeruginosa PA7] gi|218774648|emb|CAW30465.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa LESB58] gi|310879461|gb|EFQ38055.1| 50S ribosomal protein L28 [Pseudomonas aeruginosa 39016] Length = 78 Score = 97.0 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHA+NKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KRG-IEAVLADLRAR 74 >gi|313676115|ref|YP_004054111.1| LSU ribosomal protein l28p [Marivirga tractuosa DSM 4126] gi|312942813|gb|ADR22003.1| LSU ribosomal protein L28P [Marivirga tractuosa DSM 4126] Length = 79 Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K GN VSH+NNKTRRRFLPNL + ++ L++S A+R++ Sbjct: 1 MARVCQITGKRPQVGNNVSHSNNKTRRRFLPNLQKKRFYLPEEDKWITLKVSASAIRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L +++ Sbjct: 61 KNG-ITSVLKKAREN 74 >gi|146280503|ref|YP_001170656.1| 50S ribosomal protein L28 [Pseudomonas stutzeri A1501] gi|146309388|ref|YP_001189853.1| 50S ribosomal protein L28 [Pseudomonas mendocina ymp] gi|330505618|ref|YP_004382487.1| 50S ribosomal protein L28 [Pseudomonas mendocina NK-01] gi|166226604|sp|A4Y0K5|RL28_PSEMY RecName: Full=50S ribosomal protein L28 gi|166226606|sp|A4VFR3|RL28_PSEU5 RecName: Full=50S ribosomal protein L28 gi|145568708|gb|ABP77814.1| 50S ribosomal protein L28 [Pseudomonas stutzeri A1501] gi|145577589|gb|ABP87121.1| LSU ribosomal protein L28P [Pseudomonas mendocina ymp] gi|327478739|gb|AEA82049.1| 50S ribosomal protein L28 [Pseudomonas stutzeri DSM 4166] gi|328919904|gb|AEB60735.1| 50S ribosomal protein L28 [Pseudomonas mendocina NK-01] Length = 78 Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KRG-IDVVLAELRAR 74 >gi|258543788|ref|ZP_05704022.1| 50S ribosomal protein L28 [Cardiobacterium hominis ATCC 15826] gi|258520963|gb|EEV89822.1| 50S ribosomal protein L28 [Cardiobacterium hominis ATCC 15826] Length = 78 Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNK +RRFLPN+ + + +L++S +R ++ Sbjct: 1 MSRICQVTGKKPMVGNTVSHANNKNKRRFLPNIQEHRFWVESENRFVKLKVSTHGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KRG-IDAVLAEIRAR 74 >gi|224824522|ref|ZP_03697629.1| ribosomal protein L28 [Lutiella nitroferrum 2002] gi|224603015|gb|EEG09191.1| ribosomal protein L28 [Lutiella nitroferrum 2002] Length = 77 Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M+GN VSHANNKT+RRFLPNL + + +LR+S ALR+++ Sbjct: 1 MARVCKVTGKRPMTGNNVSHANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|154295457|ref|XP_001548164.1| hypothetical protein BC1G_13207 [Botryotinia fuckeliana B05.10] gi|150844075|gb|EDN19268.1| hypothetical protein BC1G_13207 [Botryotinia fuckeliana B05.10] Length = 233 Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 11 TVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN VS N KTRR + PN+ R L S + ++ +LR++ LR++++ GGLD +L Sbjct: 64 KIRYGNIVSEKNEIKTRRHWRPNVQRKRLYSPSLGRQIKLRVTTKVLRTIDKAGGLDEYL 123 Query: 70 S---NSKKENLSARMRTLRSQILK 90 + + L LR +I++ Sbjct: 124 LGEKTQRIKELGMGGWKLRWRIMQ 147 >gi|332526019|ref|ZP_08402157.1| 50S ribosomal protein L28 [Rubrivivax benzoatilyticus JA2] gi|332109862|gb|EGJ10490.1| 50S ribosomal protein L28 [Rubrivivax benzoatilyticus JA2] Length = 77 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + +LR+S ALR ++ Sbjct: 1 MARVCQVTGKRPMVGNNVSHANNKTKRRFLPNLQYRRFWMESENRWVRLRVSNAALRLID 60 Query: 61 RQG 63 + G Sbjct: 61 KVG 63 >gi|325191225|emb|CCA26012.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 140 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 +R + GN VSH+ +TRR + N L S+ +++ L ++ LR +++ Sbjct: 30 ARRGLFAGRDKGFGNNVSHSKRRTRRSWKVNHQWKHLYSEALDEMIGLNVTTHTLRCIDK 89 Query: 62 QGGLDRFLSNSKKE-NLSARMRTLRSQILKKMSEK 95 GGLD +L + E L + +++I++ + + Sbjct: 90 IGGLDNYLQSISDEQELGVKGLKAKNRIVEALKAQ 124 >gi|311696213|gb|ADP99086.1| ribosomal protein L28 [marine bacterium HP15] Length = 78 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN VSHA N TRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNVSHAMNHTRRRFLPNLQNHRFWVESEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLRAR 74 >gi|255573228|ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial precursor, putative [Ricinus communis] gi|223533093|gb|EEF34852.1| 60S ribosomal protein L24, mitochondrial precursor, putative [Ricinus communis] Length = 211 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NKTRR + PN+ L S I+++ Q++++ ALR ++ Sbjct: 43 AKRGIFAGRHIQFGNRVSEDGGNKTRRTWKPNVQEKRLFSYILDRHIQVKVTTHALRCID 102 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GG+D +L + + + M ++K+ E Sbjct: 103 KAGGIDEYLLKTPYQKMDTDMGLFWKAKIEKLYE 136 >gi|300123327|emb|CBK24600.2| unnamed protein product [Blastocystis hominis] Length = 115 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 + GN VSH+ KTRR + PN+ + L S+ +++K LR++ LR +++ GGLD ++ N+ Sbjct: 27 LFGNNVSHSERKTRRDWNPNVRHVHLYSETLDRKIGLRVTSNTLRCIDKAGGLDYYVLNT 86 Query: 73 KKENL-SARMRTLRSQILKKMSE 94 K ++L S LR +IL K E Sbjct: 87 KDKDLNSDVALRLREEILAKQRE 109 >gi|298715840|emb|CBJ28305.1| conserved unknown protein [Ectocarpus siliculosus] Length = 154 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K + GN +S ++ K RR + PN+ + L S+ +++ + ++ ALR V+R GG+DR+ Sbjct: 38 GKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRY 97 Query: 69 LSNSKKENL-SARMRTLRSQILKKMSEK 95 L + E L S + + +I + ++ + Sbjct: 98 LLKTPDEWLNSVQGSKAKRKIEEALAAR 125 >gi|58584560|ref|YP_198133.1| 50S ribosomal protein L28 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|67461241|sp|Q5GSY3|RL28_WOLTR RecName: Full=50S ribosomal protein L28 gi|58418876|gb|AAW70891.1| Ribosomal protein L28 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 104 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 66/95 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT + GNKVSH+N K +R FL NL +TLIS+I+ +K++ R++ LR+++ Sbjct: 1 MSRVCELTNRKKSFGNKVSHSNRKAKRIFLLNLHNVTLISNILNKKFKFRVAIRTLRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 +G LD FL N++ LS + + ++ ++ K ++++ Sbjct: 61 YKGNLDAFLLNTRTVKLSKKAQKIKRKLKKVLAKQ 95 >gi|320594142|gb|EFX06545.1| 50S ribosomal protein l24 [Grosmannia clavigera kw1407] Length = 268 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Query: 11 TVMSGNKVSHAN-----NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGL 65 + GN VS K RR++ PN+ L S + + RIS LR+V++ GGL Sbjct: 100 RIRFGNTVSRQTEIINPQKNRRKWRPNIQEKRLWSASLSAPIRTRISTRVLRTVDKVGGL 159 Query: 66 DRFLSN---SKKENLSARMRTLRSQILKKMSEK 95 D +L ++ L LR +I++ + + Sbjct: 160 DEYLLGSKPARIAELGPWGWRLRWRIIQTPAVQ 192 >gi|295669208|ref|XP_002795152.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb01] gi|226285086|gb|EEH40652.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb01] Length = 199 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + +L+++ LR++++ GGLD Sbjct: 73 GSTIQFGNKISKGRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTHRVLRTIKKVGGLD 132 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + + Sbjct: 133 QYLLGDKPARIKELGVFGWKLRWKVMQSRAMR 164 >gi|190576385|ref|YP_001974230.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia K279a] gi|194367723|ref|YP_002030333.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia R551-3] gi|226699168|sp|B4SNN0|RL28_STRM5 RecName: Full=50S ribosomal protein L28 gi|226699169|sp|B2FNE3|RL28_STRMK RecName: Full=50S ribosomal protein L28 gi|190014307|emb|CAQ47954.1| putative 50S ribosomal protein L28 [Stenotrophomonas maltophilia K279a] gi|194350527|gb|ACF53650.1| ribosomal protein L28 [Stenotrophomonas maltophilia R551-3] Length = 78 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+++ K V +GN VSHANNKTRRRFLPNL + +LR+S ALR+++ Sbjct: 1 MSRVCQVSGKRVQTGNNVSHANNKTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ + Sbjct: 61 KNG-IDSVLAELRAR 74 >gi|21233456|ref|NP_639373.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21244876|ref|NP_644458.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citri str. 306] gi|66770420|ref|YP_245182.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris str. 8004] gi|78049813|ref|YP_365988.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84625952|ref|YP_453324.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710250|ref|ZP_02241457.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188993625|ref|YP_001905635.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris str. B100] gi|289666100|ref|ZP_06487681.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670773|ref|ZP_06491848.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. musacearum NCPPB4381] gi|325916749|ref|ZP_08179003.1| LSU ribosomal protein L28P [Xanthomonas vesicatoria ATCC 35937] gi|325925992|ref|ZP_08187358.1| 50S ribosomal protein L28 [Xanthomonas perforans 91-118] gi|54039155|sp|P66161|RL28_XANCP RecName: Full=50S ribosomal protein L28 gi|54041854|sp|P66160|RL28_XANAC RecName: Full=50S ribosomal protein L28 gi|81303633|sp|Q4UP61|RL28_XANC8 RecName: Full=50S ribosomal protein L28 gi|123520476|sp|Q2NXC7|RL28_XANOM RecName: Full=50S ribosomal protein L28 gi|123583817|sp|Q3BMM5|RL28_XANC5 RecName: Full=50S ribosomal protein L28 gi|226699184|sp|B0RYR3|RL28_XANCB RecName: Full=50S ribosomal protein L28 gi|21110585|gb|AAM38994.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citri str. 306] gi|21115302|gb|AAM43255.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575752|gb|AAY51162.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris str. 8004] gi|78038243|emb|CAJ25988.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84369892|dbj|BAE71050.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|167735385|emb|CAP53599.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris] gi|325537003|gb|EGD08745.1| LSU ribosomal protein L28P [Xanthomonas vesicatoria ATCC 35937] gi|325543588|gb|EGD15005.1| 50S ribosomal protein L28 [Xanthomonas perforans 91-118] Length = 78 Score = 95.9 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+++ K V +GN VSHANN+TRRRFLPNL + +LR+S ALR+++ Sbjct: 1 MSRVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +D L + L AR + Sbjct: 61 KNG-IDAVL-----KELRARGEKV 78 >gi|289209156|ref|YP_003461222.1| ribosomal protein L28 [Thioalkalivibrio sp. K90mix] gi|288944787|gb|ADC72486.1| ribosomal protein L28 [Thioalkalivibrio sp. K90mix] Length = 78 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K +GN VSHA+ KTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MARVCQVTGKRPATGNNVSHAHRKTRRRFLPNLHTHRFWVESENRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KLG-IDAVLADCRAR 74 >gi|120556470|ref|YP_960821.1| 50S ribosomal protein L28 [Marinobacter aquaeolei VT8] gi|166226587|sp|A1U6L5|RL28_MARAV RecName: Full=50S ribosomal protein L28 gi|120326319|gb|ABM20634.1| LSU ribosomal protein L28P [Marinobacter aquaeolei VT8] Length = 78 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N TRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHAMNHTRRRFLPNLQNHRFWVESEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLRAR 74 >gi|229593346|ref|YP_002875465.1| 50S ribosomal protein L28 [Pseudomonas fluorescens SBW25] gi|312963848|ref|ZP_07778319.1| 50S ribosomal protein L28 [Pseudomonas fluorescens WH6] gi|259646747|sp|C3K469|RL28_PSEFS RecName: Full=50S ribosomal protein L28 gi|229365212|emb|CAY53501.1| 50S ribosomal protein L28 [Pseudomonas fluorescens SBW25] gi|311281883|gb|EFQ60493.1| 50S ribosomal protein L28 [Pseudomonas fluorescens WH6] Length = 77 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVEEEKRFVRLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|288939948|ref|YP_003442188.1| 50S ribosomal protein L28 [Allochromatium vinosum DSM 180] gi|288895320|gb|ADC61156.1| ribosomal protein L28 [Allochromatium vinosum DSM 180] Length = 78 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN VSHANNKT+RRFLPNL + ++ +LR++ A+R+++ Sbjct: 1 MSKVCQVTGKRPLTGNNVSHANNKTKRRFLPNLHEKRFWVEAEKRWVKLRLTTKAMRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + + Sbjct: 61 KKG-IDAVLVDLRAD 74 >gi|257454608|ref|ZP_05619864.1| ribosomal protein L28 [Enhydrobacter aerosaccus SK60] gi|257447918|gb|EEV22905.1| ribosomal protein L28 [Enhydrobacter aerosaccus SK60] Length = 78 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN VSHANNKTRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNVSHANNKTRRRFLPNLHTHRFWVESENRFVKLRLTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ L++ + Sbjct: 61 KVG-IDQVLTDMRAR 74 >gi|296112807|ref|YP_003626745.1| 50S ribosomal protein L28 [Moraxella catarrhalis RH4] gi|295920501|gb|ADG60852.1| 50S ribosomal protein L28 [Moraxella catarrhalis RH4] gi|326561053|gb|EGE11418.1| 50S ribosomal protein L28 [Moraxella catarrhalis 7169] gi|326561481|gb|EGE11825.1| 50S ribosomal protein L28 [Moraxella catarrhalis 46P47B1] gi|326564428|gb|EGE14656.1| 50S ribosomal protein L28 [Moraxella catarrhalis 12P80B1] gi|326566725|gb|EGE16864.1| 50S ribosomal protein L28 [Moraxella catarrhalis 103P14B1] gi|326567513|gb|EGE17628.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC1] gi|326569359|gb|EGE19419.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC8] gi|326571442|gb|EGE21457.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC7] gi|326575275|gb|EGE25203.1| 50S ribosomal protein L28 [Moraxella catarrhalis CO72] gi|326576638|gb|EGE26545.1| 50S ribosomal protein L28 [Moraxella catarrhalis 101P30B1] gi|326577494|gb|EGE27374.1| 50S ribosomal protein L28 [Moraxella catarrhalis O35E] Length = 78 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K + GN VSHA+NKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPLVGNNVSHAHNKTRRRFLPNLHNHRFWVESENRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +++ L+ +L A+ + + Sbjct: 61 KHG-IEKVLA-----DLRAQGQKI 78 >gi|15837808|ref|NP_298496.1| 50S ribosomal protein L28 [Xylella fastidiosa 9a5c] gi|28198400|ref|NP_778714.1| 50S ribosomal protein L28 [Xylella fastidiosa Temecula1] gi|71276524|ref|ZP_00652799.1| Ribosomal protein L28 [Xylella fastidiosa Dixon] gi|71900735|ref|ZP_00682857.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1] gi|71901114|ref|ZP_00683221.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1] gi|170729748|ref|YP_001775181.1| 50S ribosomal protein L28 [Xylella fastidiosa M12] gi|182681042|ref|YP_001829202.1| 50S ribosomal protein L28 [Xylella fastidiosa M23] gi|54039156|sp|P66163|RL28_XYLFT RecName: Full=50S ribosomal protein L28 gi|54041855|sp|P66162|RL28_XYLFA RecName: Full=50S ribosomal protein L28 gi|226699186|sp|B2I8L7|RL28_XYLF2 RecName: Full=50S ribosomal protein L28 gi|226699187|sp|B0U5P7|RL28_XYLFM RecName: Full=50S ribosomal protein L28 gi|9106178|gb|AAF84016.1|AE003954_13 50S ribosomal protein L28 [Xylella fastidiosa 9a5c] gi|28056470|gb|AAO28363.1| 50S ribosomal protein L28 [Xylella fastidiosa Temecula1] gi|71162701|gb|EAO12428.1| Ribosomal protein L28 [Xylella fastidiosa Dixon] gi|71729119|gb|EAO31243.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1] gi|71729505|gb|EAO31614.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1] gi|167964541|gb|ACA11551.1| 50S ribosomal protein L28 [Xylella fastidiosa M12] gi|182631152|gb|ACB91928.1| ribosomal protein L28 [Xylella fastidiosa M23] gi|307579510|gb|ADN63479.1| 50S ribosomal protein L28 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 78 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K V +GN VSHANNKTRRRFLPNL + + +LR+S CA+R+++ Sbjct: 1 MSRVCQVTGKRVQTGNNVSHANNKTRRRFLPNLHKRRFWVASENRWVKLRVSTCAVRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ + Sbjct: 61 KNG-IDAVLAELRAS 74 >gi|82703258|ref|YP_412824.1| ribosomal protein L28 [Nitrosospira multiformis ATCC 25196] gi|123544108|sp|Q2Y739|RL28_NITMU RecName: Full=50S ribosomal protein L28 gi|82411323|gb|ABB75432.1| LSU ribosomal protein L28P [Nitrosospira multiformis ATCC 25196] Length = 78 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVCE+T K M+G+ VSHANNKT+RRFLPNL R + + LR+S ALR+++ Sbjct: 1 MARVCEVTGKKPMTGHHVSHANNKTKRRFLPNLQRRRFWVESERRWISLRLSNEALRTID 60 Query: 61 RQGGLDRFLSNSKKEN 76 + G +D L+ + Sbjct: 61 KNG-IDAVLAEMRARR 75 >gi|325922641|ref|ZP_08184388.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] gi|325923804|ref|ZP_08185419.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] gi|325924285|ref|ZP_08185832.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] gi|325545234|gb|EGD16541.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] gi|325545737|gb|EGD16976.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] gi|325546876|gb|EGD17983.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865] Length = 78 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+++ K+V +GN VSHANN+TRRRFLPNL + +LR+S ALR+++ Sbjct: 1 MSRVCQVSGKSVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +D L + L AR + Sbjct: 61 KNG-IDVVL-----KELRARGEKV 78 >gi|28867329|ref|NP_789948.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato str. DC3000] gi|66043494|ref|YP_233335.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. syringae B728a] gi|71736327|ref|YP_272517.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213970683|ref|ZP_03398808.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato T1] gi|237797775|ref|ZP_04586236.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257481768|ref|ZP_05635809.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625762|ref|ZP_06458716.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646361|ref|ZP_06477704.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. aesculi str. 2250] gi|289674416|ref|ZP_06495306.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. syringae FF5] gi|298484833|ref|ZP_07002933.1| LSU ribosomal protein L28p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|38258485|sp|Q88BC8|RL28_PSESM RecName: Full=50S ribosomal protein L28 gi|75503899|sp|Q4ZZX5|RL28_PSEU2 RecName: Full=50S ribosomal protein L28 gi|123638796|sp|Q48Q02|RL28_PSE14 RecName: Full=50S ribosomal protein L28 gi|28850563|gb|AAO53643.1| ribosomal protein L28 [Pseudomonas syringae pv. tomato str. DC3000] gi|63254201|gb|AAY35297.1| Ribosomal protein L28 [Pseudomonas syringae pv. syringae B728a] gi|71556880|gb|AAZ36091.1| ribosomal protein L28 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213924517|gb|EEB58087.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato T1] gi|298160687|gb|EFI01708.1| LSU ribosomal protein L28p [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866538|gb|EGH01247.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330876488|gb|EGH10637.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330895711|gb|EGH28001.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941091|gb|EGH43993.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. pisi str. 1704B] gi|330952114|gb|EGH52374.1| 50S ribosomal protein L28 [Pseudomonas syringae Cit 7] gi|330957301|gb|EGH57561.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330964263|gb|EGH64523.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330972195|gb|EGH72261.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330977332|gb|EGH77285.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330986858|gb|EGH84961.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009402|gb|EGH89458.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331020625|gb|EGI00682.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 77 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVEGEKRFVRLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|149376402|ref|ZP_01894164.1| 50S ribosomal protein L28 [Marinobacter algicola DG893] gi|149359243|gb|EDM47705.1| 50S ribosomal protein L28 [Marinobacter algicola DG893] Length = 78 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N +RRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHAMNHSRRRFLPNLQNHRFWVESEKRFVRLRVSTKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADLRAR 74 >gi|330873141|gb|EGH07290.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. glycinea str. race 4] Length = 77 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVEGEKRFVRLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|292490694|ref|YP_003526133.1| ribosomal protein L28 [Nitrosococcus halophilus Nc4] gi|291579289|gb|ADE13746.1| ribosomal protein L28 [Nitrosococcus halophilus Nc4] Length = 78 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN VSHA+NKT+RRFLPNL + ++ +L++S LR ++ Sbjct: 1 MSRVCQVTGKRPVSGNNVSHAHNKTKRRFLPNLHTHRFWVESEKRWVKLKVSSKGLRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D+ L++ + Sbjct: 61 KRG-IDQVLADLRTR 74 >gi|304310174|ref|YP_003809772.1| 50S ribosomal protein L28 [gamma proteobacterium HdN1] gi|301795907|emb|CBL44108.1| 50S ribosomal protein L28 [gamma proteobacterium HdN1] Length = 78 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K ++GN VSHAN KTRRRF PNL + + ++ +LR+S LR ++ Sbjct: 1 MAKVCQVTGKRPITGNNVSHANRKTRRRFEPNLHHHRIWVESEKRFVRLRVSNHGLRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G +D+ L+ +L R + Sbjct: 61 KVG-IDQVLA-----DLRVRGEKV 78 >gi|311745778|ref|ZP_07719563.1| ribosomal protein L28 [Algoriphagus sp. PR1] gi|126575977|gb|EAZ80255.1| ribosomal protein L28 [Algoriphagus sp. PR1] Length = 80 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K GN VSHANNKT+RRF PNL + T + L++ AL+++ Sbjct: 1 MAKVCDITGKRPRVGNNVSHANNKTKRRFYPNLHKKTFYVPEEDAWITLKVCTKALKTIN 60 Query: 61 RQGGLDRFLSNSKKENL 77 ++G + L +++ + Sbjct: 61 KKG-ISAVLKEAEESGM 76 >gi|285016930|ref|YP_003374641.1| 50s ribosomal subunit protein l28 [Xanthomonas albilineans GPE PC73] gi|283472148|emb|CBA14655.1| probable 50s ribosomal subunit protein l28 [Xanthomonas albilineans] Length = 78 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+++ K V +GN VSHANNKTRRRFLPNL + +L++S ALR+++ Sbjct: 1 MSRVCQVSGKRVQTGNNVSHANNKTRRRFLPNLHERRFWVASENRWVKLKVSAHALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ + Sbjct: 61 KNG-IDTVLAELRAR 74 >gi|50307287|ref|XP_453622.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642756|emb|CAH00718.1| KLLA0D12562p [Kluyveromyces lactis] Length = 255 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 50/89 (56%), Gaps = 3/89 (3%) Query: 12 VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN 71 + GN ++ + KTRR + PN+ R L S+ + +K ++++ LR++ ++GG+D +L+ Sbjct: 76 IQFGNNIAESKTKTRRSWSPNVIRKGLWSETLNRKISIKMTAKVLRTITKEGGIDNYLTK 135 Query: 72 ---SKKENLSARMRTLRSQILKKMSEKSS 97 ++ + L LR ++L + ++ Sbjct: 136 EKAARIKELGPTGWKLRYRLLNSKEKAAN 164 >gi|77461758|ref|YP_351265.1| 50S ribosomal protein L28 [Pseudomonas fluorescens Pf0-1] gi|123602799|sp|Q3K4N0|RL28_PSEPF RecName: Full=50S ribosomal protein L28 gi|77385761|gb|ABA77274.1| 50S ribosomal protein L28 [Pseudomonas fluorescens Pf0-1] Length = 77 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVEEEKRFVRLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|145518488|ref|XP_001445116.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124412560|emb|CAK77719.1| unnamed protein product [Paramecium tetraurelia] Length = 289 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C K SGN+ + KTRR ++PN+ + T S I+ +K ++++ ++ + Sbjct: 58 MSQFCLWHGKQPKSGNQTCFSEKKTRRSWMPNVQKQTYESLILGRKIHVKVTTKTMKCIR 117 Query: 61 RQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 + G D ++ +K ++L S LR +L K+++ S Sbjct: 118 KAGSFDNYVLLTKPQDLDSIYGEYLRKLMLTKVNDPS 154 >gi|319943235|ref|ZP_08017518.1| 50S ribosomal protein L28 [Lautropia mirabilis ATCC 51599] gi|319743777|gb|EFV96181.1| 50S ribosomal protein L28 [Lautropia mirabilis ATCC 51599] Length = 76 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K M GN VSHANNKT+RRFLPNL + L + ++ +LR++ LR ++ Sbjct: 1 MAKVCQVTGKGPMVGNNVSHANNKTKRRFLPNLQQRRLWVESEQRYVRLRVTAAGLRKID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|260072713|gb|ACX30609.1| ribosomal protein L28 [uncultured bacterium ARCTIC96BD-19] Length = 78 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K +SGN VSHANN+TRRRF PNL + + +L++S LR ++ Sbjct: 1 MSKVCQVTGKRPISGNNVSHANNRTRRRFYPNLHTHRFWVEAENRFVKLKLSARGLRVID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L+ + Sbjct: 61 KKG-IDVVLAEIR 72 >gi|77166098|ref|YP_344623.1| ribosomal protein L28 [Nitrosococcus oceani ATCC 19707] gi|254436099|ref|ZP_05049606.1| ribosomal protein L28 [Nitrosococcus oceani AFC27] gi|123593489|sp|Q3J7V3|RL28_NITOC RecName: Full=50S ribosomal protein L28 gi|76884412|gb|ABA59093.1| LSU ribosomal protein L28P [Nitrosococcus oceani ATCC 19707] gi|207089210|gb|EDZ66482.1| ribosomal protein L28 [Nitrosococcus oceani AFC27] Length = 78 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K SGN VSHA+NKTRRRFLPNL + + +L++S LR ++ Sbjct: 1 MSKVCQVTGKRPASGNNVSHAHNKTRRRFLPNLHTHRFWVEGENRWVKLKVSGKGLRMID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ L++ + Sbjct: 61 KLG-IDQVLADMRTR 74 >gi|145346206|ref|XP_001417584.1| Putative mitochondrial ribosomal protein L28 [Ostreococcus lucimarinus CCE9901] gi|144577811|gb|ABO95877.1| Putative mitochondrial ribosomal protein L28 [Ostreococcus lucimarinus CCE9901] Length = 125 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R K + GN VS NKTRRR+LPN + + S+++E+ +R++ ALR ++ Sbjct: 21 ARRGLFAGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRVYSELLEEMIPMRVTAHALRCMD 80 Query: 61 RQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 + GGLD ++ ++ ++L S L+ ++ S Sbjct: 81 KAGGLDEYILRTRDQDLKSVFALELKERLKAAKSA 115 >gi|326793824|ref|YP_004311644.1| 50S ribosomal protein L28 [Marinomonas mediterranea MMB-1] gi|326544588|gb|ADZ89808.1| 50S ribosomal protein L28 [Marinomonas mediterranea MMB-1] Length = 78 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSH+ +T+RRFLPNL D + ++R+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHSKRRTKRRFLPNLHWHRFWVDSENRYVRIRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADMRAN 74 >gi|332666735|ref|YP_004449523.1| 50S ribosomal protein L28 [Haliscomenobacter hydrossis DSM 1100] gi|332335549|gb|AEE52650.1| 50S ribosomal protein L28 [Haliscomenobacter hydrossis DSM 1100] Length = 87 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC+LT K + GN VSH+N KT+RRFLPNL + +Q L++S A+R++ Sbjct: 1 MSKVCQLTGKRPIVGNNVSHSNRKTKRRFLPNLQKKRFFIPETDQWVTLKLSTSAMRNIS 60 Query: 61 RQGGLDRFL 69 + G + +L Sbjct: 61 KLG-IYEYL 68 >gi|258567372|ref|XP_002584430.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237905876|gb|EEP80277.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 232 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S N KTRR + PN+ + + S+ + + L++ LR++++ GGLD Sbjct: 71 GATIQFGNKISKGRNEGKTRRTWKPNIRKEKIYSEALGKWLDLKVQHRVLRTIKKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR Q++ + + Sbjct: 131 QYLLGEKPARIKELGIFGWHLRWQVMTSKAMR 162 >gi|146329689|ref|YP_001208992.1| 50S ribosomal protein L28 [Dichelobacter nodosus VCS1703A] gi|166226570|sp|A5EWV8|RL28_DICNV RecName: Full=50S ribosomal protein L28 gi|146233159|gb|ABQ14137.1| 50S ribosomal protein L28 [Dichelobacter nodosus VCS1703A] Length = 78 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNK +RRFLPN+ + L++S +R ++ Sbjct: 1 MSRICQVTGKKPMVGNTVSHANNKGKRRFLPNIQEHRFWVQSENRFITLKVSAHGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAQMRAR 74 >gi|330890936|gb|EGH23597.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. mori str. 301020] Length = 77 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 44/63 (69%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWIEGEKRFVRLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|171464048|ref|YP_001798161.1| ribosomal protein L28 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226699144|sp|B1XW20|RL28_POLNS RecName: Full=50S ribosomal protein L28 gi|171193586|gb|ACB44547.1| ribosomal protein L28 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 77 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K M GN VSHA NKT+RRFLPNL + + LR++ LR ++ Sbjct: 1 MAKVCQVTGKKPMVGNNVSHAKNKTKRRFLPNLQNRRFWVESENRWISLRLTNAGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D LS+ + Sbjct: 61 KNG-IDAVLSDLRTR 74 >gi|71082914|ref|YP_265633.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1062] gi|91762663|ref|ZP_01264628.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1002] gi|71062027|gb|AAZ21030.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1062] gi|91718465|gb|EAS85115.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1002] Length = 107 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 38/80 (47%), Positives = 55/80 (68%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ CELT K M G+ VSHANNKT+RRFLPNL + S+++++ L +S +RSV+ Sbjct: 1 MSKKCELTGKIPMKGHNVSHANNKTKRRFLPNLKKAKFTSELLKRSLTLTVSNAGVRSVD 60 Query: 61 RQGGLDRFLSNSKKENLSAR 80 ++G D+FL K +N+S R Sbjct: 61 KKGTFDQFLKTVKNKNISPR 80 >gi|126664653|ref|ZP_01735637.1| 50S ribosomal subunit protein L28 [Marinobacter sp. ELB17] gi|126630979|gb|EBA01593.1| 50S ribosomal subunit protein L28 [Marinobacter sp. ELB17] Length = 78 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N TRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVAGNNVSHAMNHTRRRFLPNLQSHRFWVETEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDIVLADLRAR 74 >gi|89094939|ref|ZP_01167870.1| 50S ribosomal protein L28 [Oceanospirillum sp. MED92] gi|89080805|gb|EAR60046.1| 50S ribosomal protein L28 [Oceanospirillum sp. MED92] Length = 78 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K ++GN VSH+ KTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKVCMVTGKRPVTGNNVSHSQRKTRRRFLPNLHWHRFWVESENKFVRLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLTEVRAN 74 >gi|156048865|ref|XP_001590399.1| hypothetical protein SS1G_08139 [Sclerotinia sclerotiorum 1980] gi|154692538|gb|EDN92276.1| hypothetical protein SS1G_08139 [Sclerotinia sclerotiorum 1980 UF-70] Length = 231 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%) Query: 11 TVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN VS N KTRR + PN+ R L S + + +LRI+ LR++++ GGLD +L Sbjct: 62 KIRYGNIVSKKNEIKTRRHWRPNVQRKRLYSASLGKHIKLRITTKVLRTIDKAGGLDEYL 121 Query: 70 SNSKK---ENLSARMRTLRSQILKKMSEK 95 K + L LR +I++ S K Sbjct: 122 LGEKTQRLKELGMGGWKLRWRIMQTDSVK 150 >gi|145517660|ref|XP_001444713.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124412135|emb|CAK77316.1| unnamed protein product [Paramecium tetraurelia] Length = 289 Score = 93.9 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C K SGN+ + KTRR ++PN+ + T S I+ ++ ++++ ++ + Sbjct: 58 MSQFCLWHGKQPKSGNQTCFSEKKTRRSWMPNVQKQTYESLILGRRIHVKVTAKTMKCIR 117 Query: 61 RQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 + G D ++ +K ++L S LR +L K+++ S Sbjct: 118 KAGSFDNYILLTKPQDLDSIYGEYLRQLMLTKINDPS 154 >gi|50292515|ref|XP_448690.1| hypothetical protein [Candida glabrata CBS 138] gi|49528002|emb|CAG61653.1| unnamed protein product [Candida glabrata] Length = 267 Score = 93.9 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 53/92 (57%), Gaps = 3/92 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V GNK+S + +KTRR + PN+ + +L S+ + + ++++ LR++ ++GG+D + Sbjct: 85 GSFVKYGNKISESKHKTRRTWHPNVIKKSLWSETLNRSINIKMTAKVLRTIIKEGGIDNY 144 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSEKSS 97 L ++ + L LR +I+++ + ++ Sbjct: 145 LIKDKSARIKELGPTGWKLRYRIMQRKEQLNN 176 >gi|83643894|ref|YP_432329.1| ribosomal protein L28 [Hahella chejuensis KCTC 2396] gi|123534643|sp|Q2SN70|RL28_HAHCH RecName: Full=50S ribosomal protein L28 gi|83631937|gb|ABC27904.1| ribosomal protein L28 [Hahella chejuensis KCTC 2396] Length = 78 Score = 93.6 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K+ ++GN VSHANNKT+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKSPITGNNVSHANNKTKRRFLPNLQTHRFWVENEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D+ LS+ + Sbjct: 61 KVG-IDKVLSDIRAR 74 >gi|52308049|gb|AAU38549.1| RpmB protein [Mannheimia succiniciproducens MBEL55E] Length = 82 Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 5 MSRVCQVTGKRPAVGNNRSHALNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 64 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 65 KKG-IDAVLADIRAR 78 >gi|224142087|ref|XP_002324390.1| predicted protein [Populus trichocarpa] gi|222865824|gb|EEF02955.1| predicted protein [Populus trichocarpa] Length = 177 Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN++S NK+RR + PN+ L S I+++ +++++ A+R ++ Sbjct: 44 AKRGLFAGRHIQFGNQISEDGGNKSRRSWKPNVQDKRLFSYILDRHVRVKVTTHAIRCID 103 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + M L ++K+ E+ Sbjct: 104 KAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEE 138 >gi|40063305|gb|AAR38123.1| ribosomal protein L28 [uncultured marine bacterium 578] Length = 78 Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K +SGN VSHANNKTRRRF PNL + + +L++S LR ++ Sbjct: 1 MAKVCQVTGKRPISGNNVSHANNKTRRRFYPNLHTHRFWVENENRFVKLKLSARGLRVID 60 Query: 61 RQGGLDRFLSNSK 73 ++G +D L+ + Sbjct: 61 KKG-IDVVLAEIR 72 >gi|114321788|ref|YP_743471.1| 50S ribosomal protein L28P [Alkalilimnicola ehrlichii MLHE-1] gi|122310770|sp|Q0A5A6|RL28_ALHEH RecName: Full=50S ribosomal protein L28 gi|114228182|gb|ABI57981.1| LSU ribosomal protein L28P [Alkalilimnicola ehrlichii MLHE-1] Length = 78 Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K +GN VSHANNKT+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPTTGNNVSHANNKTKRRFLPNLHHHRFWVESEQRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R+G +D+ L +L AR + Sbjct: 61 RKG-IDQVL-----SDLRARGEKV 78 >gi|281203401|gb|EFA77601.1| hypothetical protein PPL_12207 [Polysphondylium pallidum PN500] Length = 142 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 +T+ GN +S ++ KTRR + PN+ T SDI+ Q ++ ++ +R +++ G D + Sbjct: 35 GRTIQYGNSISFSHKKTRRTWKPNVQSKTYHSDILNQDIKVDVTTYTMRCIDKAGNFDNY 94 Query: 69 LSNSKKENL-SARMRTLRSQILKKMSEKS 96 + N+K ++L S L+ + + EK+ Sbjct: 95 IINTKDKDLDSKLGSDLKVLLKSTLREKA 123 >gi|118595305|ref|ZP_01552652.1| 50S ribosomal protein L28 [Methylophilales bacterium HTCC2181] gi|118441083|gb|EAV47710.1| 50S ribosomal protein L28 [Methylophilales bacterium HTCC2181] Length = 78 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+T K +SGN VSHANN+TRRRFLPNL + + + +RIS ALR+++ Sbjct: 1 MTRECEVTGKRPVSGNNVSHANNRTRRRFLPNLHNRRIWVETENRWVSMRISSAALRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D ++ + + Sbjct: 61 KLG-IDAVIAKMRSD 74 >gi|326480944|gb|EGE04954.1| 54S ribosomal protein L24 [Trichophyton equinum CBS 127.97] Length = 232 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEEIELKVTHGVLRTINKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 131 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 162 >gi|153877669|ref|ZP_02004325.1| Ribosomal protein L28 [Beggiatoa sp. PS] gi|152065867|gb|EDN65675.1| Ribosomal protein L28 [Beggiatoa sp. PS] Length = 78 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K +SGN VSHA+NKT+RRFLPNL + +LR++ +R ++ Sbjct: 1 MSKVCQVTGKRPISGNNVSHAHNKTKRRFLPNLHTHRFWVPDENRYIKLRVTTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|183597218|ref|ZP_02958711.1| hypothetical protein PROSTU_00460 [Providencia stuartii ATCC 25827] gi|188023531|gb|EDU61571.1| hypothetical protein PROSTU_00460 [Providencia stuartii ATCC 25827] Length = 78 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K MSGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAELRAR 74 >gi|326473945|gb|EGD97954.1| 50S ribosomal protein L24 [Trichophyton tonsurans CBS 112818] Length = 234 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEEIELKVTHGVLRTINKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 131 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 162 >gi|300113188|ref|YP_003759763.1| 50S ribosomal protein L28 [Nitrosococcus watsonii C-113] gi|299539125|gb|ADJ27442.1| ribosomal protein L28 [Nitrosococcus watsonii C-113] Length = 78 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K SGN VSHA+NKTRRRFLPNL + + +L++S LR ++ Sbjct: 1 MSKVCQVTGKRPASGNNVSHAHNKTRRRFLPNLHTHRFWVEGENRWVKLKVSGKGLRMID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +DR L++ + Sbjct: 61 KLG-IDRVLADMRAR 74 >gi|327295266|ref|XP_003232328.1| 50S ribosomal protein L24 [Trichophyton rubrum CBS 118892] gi|326465500|gb|EGD90953.1| 50S ribosomal protein L24 [Trichophyton rubrum CBS 118892] Length = 232 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVTHGVLRTINKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 131 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 162 >gi|315043030|ref|XP_003170891.1| 54S ribosomal protein L24 [Arthroderma gypseum CBS 118893] gi|311344680|gb|EFR03883.1| 54S ribosomal protein L24 [Arthroderma gypseum CBS 118893] Length = 232 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEEIELKVTHGVLRTINKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 131 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 162 >gi|167855901|ref|ZP_02478651.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] gi|219872083|ref|YP_002476458.1| 50S ribosomal protein L28 [Haemophilus parasuis SH0165] gi|254801363|sp|B8F858|RL28_HAEPS RecName: Full=50S ribosomal protein L28 gi|167852989|gb|EDS24253.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] gi|219692287|gb|ACL33510.1| 50S ribosomal protein L28 [Haemophilus parasuis SH0165] Length = 78 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K + GN SHA N T+RRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVVGNNRSHAMNATKRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|53803464|ref|YP_114755.1| 50S ribosomal protein L28 [Methylococcus capsulatus str. Bath] gi|67461354|sp|Q605E5|RL28_METCA RecName: Full=50S ribosomal protein L28 gi|53757225|gb|AAU91516.1| ribosomal protein L28 [Methylococcus capsulatus str. Bath] Length = 78 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + G+ VSHANNKT+R F PNL + + +L++S LR ++ Sbjct: 1 MSKVCQVTGKRRIVGHNVSHANNKTKRLFNPNLHERRFWVESENRWVRLKVSNHGLRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ +K Sbjct: 61 KCG-IDAVLADIRKR 74 >gi|208806801|ref|ZP_03249138.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4206] gi|208726602|gb|EDZ76203.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4206] Length = 85 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 8 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 67 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 68 KKG-IDTVLAELRAR 81 >gi|164656903|ref|XP_001729578.1| hypothetical protein MGL_3122 [Malassezia globosa CBS 7966] gi|159103471|gb|EDP42364.1| hypothetical protein MGL_3122 [Malassezia globosa CBS 7966] Length = 153 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 56/87 (64%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + V GN + + +KT R++ PN+ R TL S+ +++ R++ A+RS+E+ GGLD++ Sbjct: 59 GRIVQFGNTIPKSRHKTSRKWTPNIQRTTLWSETLQEYVTTRVATSAMRSIEKHGGLDQY 118 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEK 95 L+ +K+ +L RTLR ++ + + +K Sbjct: 119 LARTKESHLGEFGRTLRMRVARALRDK 145 >gi|115472627|ref|NP_001059912.1| Os07g0544900 [Oryza sativa Japonica Group] gi|34393259|dbj|BAC83129.1| unknown protein [Oryza sativa Japonica Group] gi|113611448|dbj|BAF21826.1| Os07g0544900 [Oryza sativa Japonica Group] gi|125558698|gb|EAZ04234.1| hypothetical protein OsI_26378 [Oryza sativa Indica Group] gi|125600612|gb|EAZ40188.1| hypothetical protein OsJ_24633 [Oryza sativa Japonica Group] Length = 204 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GNKVS NK+RR + PN+ L S I ++ +++++ ALR ++ Sbjct: 44 AKRGIYAGRHIQFGNKVSEDGGNKSRRTWKPNVQEKRLFSYIHDRHIRVKVTTHALRCID 103 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 + GG+D +L + + M ++KM + + Sbjct: 104 KAGGIDEYLLKTPYNKMDTEMGVAWKAKIEKMYSQLA 140 >gi|320584009|gb|EFW98221.1| 54S ribosomal protein L24, mitochondrial [Pichia angusta DL-1] Length = 260 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S + ++ GNKVS N+ RR +LPN+ L S+ + + L+++ LR++ + Sbjct: 73 SNRGLFGGQFIVFGNKVSEHKNRARRTWLPNVVNKKLWSESLNKMVPLKLTARVLRTITK 132 Query: 62 QGGLDRFLSN---SKKENLSARMRTLRSQILKKM--SEKSS 97 +GGLD +L+ ++ + L LR +LK ++K+S Sbjct: 133 EGGLDNYLTKDKRARIKELGPFGWRLRYDVLKAQERAKKAS 173 >gi|87120856|ref|ZP_01076748.1| ribosomal protein L28 [Marinomonas sp. MED121] gi|86163694|gb|EAQ64967.1| ribosomal protein L28 [Marinomonas sp. MED121] Length = 78 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSH+ +T+RRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHSKRRTKRRFLPNLHWHRFWVEGENRFVRLRVSSKGIRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IEAVLTDLRAN 74 >gi|269468151|gb|EEZ79855.1| ribosomal protein L28 [uncultured SUP05 cluster bacterium] gi|269468485|gb|EEZ80146.1| ribosomal protein L28 [uncultured SUP05 cluster bacterium] Length = 78 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+++C++T K +SGN VSHANN+TRRRF PNL + + +L+++ LR V+ Sbjct: 1 MAKICQVTGKRPISGNNVSHANNRTRRRFYPNLHTHRFWVESENRFVKLKLTAKGLRIVD 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAEIRAR 74 >gi|16272889|ref|NP_439112.1| 50S ribosomal protein L28 [Haemophilus influenzae Rd KW20] gi|68249539|ref|YP_248651.1| 50S ribosomal protein L28 [Haemophilus influenzae 86-028NP] gi|145628113|ref|ZP_01783914.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21] gi|145630046|ref|ZP_01785828.1| 50S ribosomal protein L33 [Haemophilus influenzae R3021] gi|145632337|ref|ZP_01788072.1| 50S ribosomal protein L33 [Haemophilus influenzae 3655] gi|145634127|ref|ZP_01789838.1| 50S ribosomal protein L33 [Haemophilus influenzae PittAA] gi|145637256|ref|ZP_01792917.1| 50S ribosomal protein L33 [Haemophilus influenzae PittHH] gi|145638226|ref|ZP_01793836.1| DNA repair protein RadC [Haemophilus influenzae PittII] gi|145640619|ref|ZP_01796202.1| 50S ribosomal protein L33 [Haemophilus influenzae R3021] gi|148826398|ref|YP_001291151.1| 50S ribosomal protein L28 [Haemophilus influenzae PittEE] gi|148828129|ref|YP_001292882.1| 50S ribosomal protein L28 [Haemophilus influenzae PittGG] gi|229843988|ref|ZP_04464129.1| 50S ribosomal protein L28 [Haemophilus influenzae 6P18H1] gi|229846011|ref|ZP_04466123.1| 50S ribosomal protein L28 [Haemophilus influenzae 7P49H1] gi|251793908|ref|YP_003008640.1| 50S ribosomal protein L28 [Aggregatibacter aphrophilus NJ8700] gi|260580041|ref|ZP_05847871.1| ribosomal protein L28 [Haemophilus influenzae RdAW] gi|260581786|ref|ZP_05849583.1| ribosomal protein L28 [Haemophilus influenzae NT127] gi|270616371|ref|ZP_06221735.1| ribosomal protein-related protein [Haemophilus influenzae HK1212] gi|315633558|ref|ZP_07888848.1| 50S ribosomal protein L28 [Aggregatibacter segnis ATCC 33393] gi|319897559|ref|YP_004135756.1| 50S ribosomal subunit protein l28 [Haemophilus influenzae F3031] gi|1173011|sp|P44364|RL28_HAEIN RecName: Full=50S ribosomal protein L28 gi|81336034|sp|Q4QLV6|RL28_HAEI8 RecName: Full=50S ribosomal protein L28 gi|166226578|sp|A5UDB7|RL28_HAEIE RecName: Full=50S ribosomal protein L28 gi|166226579|sp|A5UI93|RL28_HAEIG RecName: Full=50S ribosomal protein L28 gi|1573976|gb|AAC22612.1| ribosomal protein L28 (rpL28) [Haemophilus influenzae Rd KW20] gi|68057738|gb|AAX87991.1| 50S ribosomal protein L28 [Haemophilus influenzae 86-028NP] gi|144979888|gb|EDJ89547.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21] gi|144984327|gb|EDJ91750.1| 50S ribosomal protein L33 [Haemophilus influenzae R3021] gi|144987244|gb|EDJ93774.1| 50S ribosomal protein L33 [Haemophilus influenzae 3655] gi|145268571|gb|EDK08564.1| 50S ribosomal protein L33 [Haemophilus influenzae PittAA] gi|145269508|gb|EDK09450.1| 50S ribosomal protein L33 [Haemophilus influenzae PittHH] gi|145272555|gb|EDK12462.1| DNA repair protein RadC [Haemophilus influenzae PittII] gi|145274545|gb|EDK14408.1| 50S ribosomal protein L33 [Haemophilus influenzae 22.4-21] gi|148716558|gb|ABQ98768.1| 50S ribosomal protein L28 [Haemophilus influenzae PittEE] gi|148719371|gb|ABR00499.1| 50S ribosomal protein L28 [Haemophilus influenzae PittGG] gi|229811015|gb|EEP46732.1| 50S ribosomal protein L28 [Haemophilus influenzae 7P49H1] gi|229812982|gb|EEP48670.1| 50S ribosomal protein L28 [Haemophilus influenzae 6P18H1] gi|247535307|gb|ACS98553.1| ribosomal protein L28 [Aggregatibacter aphrophilus NJ8700] gi|260093325|gb|EEW77258.1| ribosomal protein L28 [Haemophilus influenzae RdAW] gi|260095379|gb|EEW79270.1| ribosomal protein L28 [Haemophilus influenzae NT127] gi|270317975|gb|EFA29270.1| ribosomal protein-related protein [Haemophilus influenzae HK1212] gi|301169676|emb|CBW29277.1| 50S ribosomal subunit protein L28 [Haemophilus influenzae 10810] gi|309751381|gb|ADO81365.1| 50S ribosomal protein L28 [Haemophilus influenzae R2866] gi|309973546|gb|ADO96747.1| 50S ribosomal protein L28 [Haemophilus influenzae R2846] gi|315477600|gb|EFU68342.1| 50S ribosomal protein L28 [Aggregatibacter segnis ATCC 33393] gi|317433065|emb|CBY81439.1| 50S ribosomal subunit protein L28 [Haemophilus influenzae F3031] Length = 78 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|152977702|ref|YP_001343331.1| 50S ribosomal protein L28 [Actinobacillus succinogenes 130Z] gi|161510960|ref|YP_089134.2| 50S ribosomal protein L28 [Mannheimia succiniciproducens MBEL55E] gi|67461371|sp|Q65R61|RL28_MANSM RecName: Full=50S ribosomal protein L28 gi|171472903|sp|A6VK99|RL28_ACTSZ RecName: Full=50S ribosomal protein L28 gi|150839425|gb|ABR73396.1| ribosomal protein L28 [Actinobacillus succinogenes 130Z] Length = 78 Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHALNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADIRAR 74 >gi|261867144|ref|YP_003255066.1| 50S ribosomal protein L28 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412476|gb|ACX81847.1| 50S ribosomal protein L28 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 78 Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL D + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATRRRFLPNLHTHRFWVDSENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|307546415|ref|YP_003898894.1| 50S ribosomal protein L28 [Halomonas elongata DSM 2581] gi|307218439|emb|CBV43709.1| 50S ribosomal protein L28 [Halomonas elongata DSM 2581] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++G+ VSH+ KT RRF+PNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPVTGHNVSHSQRKTPRRFVPNLHTHRFWVEAEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ +K Sbjct: 61 KKG-IDAVLSDIRKR 74 >gi|261494188|ref|ZP_05990690.1| RpmB protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495584|ref|ZP_05992030.1| RpmB protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308691|gb|EEY09948.1| RpmB protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310169|gb|EEY11370.1| RpmB protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|152994663|ref|YP_001339498.1| 50S ribosomal protein L28 [Marinomonas sp. MWYL1] gi|189029445|sp|A6VSY4|RL28_MARMS RecName: Full=50S ribosomal protein L28 gi|150835587|gb|ABR69563.1| ribosomal protein L28 [Marinomonas sp. MWYL1] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSH+ +T+RRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPITGNNVSHSKRRTKRRFLPNLHWHRFWVEGENRYIRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L+ + Sbjct: 61 KKG-IESVLAEIRAN 74 >gi|32034053|ref|ZP_00134297.1| COG0227: Ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209425|ref|YP_001054650.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae L20] gi|165977414|ref|YP_001653007.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151328|ref|YP_001969853.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|240950186|ref|ZP_04754473.1| 50S ribosomal protein L28 [Actinobacillus minor NM305] gi|257465203|ref|ZP_05629574.1| 50S ribosomal protein L28 [Actinobacillus minor 202] gi|303250353|ref|ZP_07336552.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251746|ref|ZP_07337917.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246910|ref|ZP_07528975.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249046|ref|ZP_07531054.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251245|ref|ZP_07533166.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253662|ref|ZP_07535529.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255892|ref|ZP_07537693.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258077|ref|ZP_07539829.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260345|ref|ZP_07542052.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262475|ref|ZP_07544120.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264683|ref|ZP_07546263.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322515257|ref|ZP_08068255.1| 50S ribosomal protein L28 [Actinobacillus ureae ATCC 25976] gi|325577759|ref|ZP_08148034.1| 50S ribosomal protein L28 [Haemophilus parainfluenzae ATCC 33392] gi|166226534|sp|A3N3Q9|RL28_ACTP2 RecName: Full=50S ribosomal protein L28 gi|226738020|sp|B3H341|RL28_ACTP7 RecName: Full=50S ribosomal protein L28 gi|226738021|sp|B0BTZ6|RL28_ACTPJ RecName: Full=50S ribosomal protein L28 gi|126098217|gb|ABN75045.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877515|gb|ABY70563.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916459|gb|ACE62711.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|240295273|gb|EER46059.1| 50S ribosomal protein L28 [Actinobacillus minor NM305] gi|257450863|gb|EEV24906.1| 50S ribosomal protein L28 [Actinobacillus minor 202] gi|301154719|emb|CBW14182.1| 50S ribosomal subunit protein L28 [Haemophilus parainfluenzae T3T1] gi|302649176|gb|EFL79361.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650823|gb|EFL80980.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852195|gb|EFM84435.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854504|gb|EFM86699.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856761|gb|EFM88896.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858898|gb|EFM90944.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861160|gb|EFM93153.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863440|gb|EFM95371.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865596|gb|EFM97477.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867852|gb|EFM99683.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869995|gb|EFN01759.1| 50S ribosomal protein L28 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|322118762|gb|EFX90968.1| 50S ribosomal protein L28 [Actinobacillus ureae ATCC 25976] gi|325160504|gb|EGC72630.1| 50S ribosomal protein L28 [Haemophilus parainfluenzae ATCC 33392] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHALNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|90408983|ref|ZP_01217114.1| ribosomal protein L28 [Psychromonas sp. CNPT3] gi|90309897|gb|EAS38051.1| ribosomal protein L28 [Psychromonas sp. CNPT3] Length = 73 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +GN VSHA N+TRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPATGNNVSHAKNRTRRRFLPNLQSHRFWVESENRFVKLRLTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKK 74 ++G +D L++ + Sbjct: 61 KKG-IDTVLADIRA 73 >gi|78486257|ref|YP_392182.1| ribosomal protein L28 [Thiomicrospira crunogena XCL-2] gi|123555021|sp|Q31EB5|RL28_THICR RecName: Full=50S ribosomal protein L28 gi|78364543|gb|ABB42508.1| LSU ribosomal protein L28P [Thiomicrospira crunogena XCL-2] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K + GN VSH++ KTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKICQVTGKKPVVGNNVSHSHRKTRRRFLPNLQTHRFWVENENRFVKLRLSTSGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L+ + Sbjct: 61 KNG-IESVLAEMRAR 74 >gi|330720901|gb|EGG99084.1| LSU ribosomal protein L28p [gamma proteobacterium IMCC2047] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN VSHA N+TRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHTHRFWVESEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D+ L++ + Sbjct: 61 KKG-IDQVLADIRAN 74 >gi|254579857|ref|XP_002495914.1| ZYRO0C05940p [Zygosaccharomyces rouxii] gi|238938805|emb|CAR26981.1| ZYRO0C05940p [Zygosaccharomyces rouxii] Length = 256 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 3/89 (3%) Query: 12 VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN 71 V GN ++ + KTRRR+LPN+ R L S+ +E+K L ++ LR++ ++GG+D +L+ Sbjct: 76 VQYGNNIAESKTKTRRRWLPNVIRKGLWSETLERKISLGMTAKVLRTISKEGGIDNYLTK 135 Query: 72 ---SKKENLSARMRTLRSQILKKMSEKSS 97 ++ + L LR +I+++ +++ Sbjct: 136 DKSARIKELGPTGWRLRYRIMRRKELEAN 164 >gi|156844322|ref|XP_001645224.1| hypothetical protein Kpol_1060p22 [Vanderwaltozyma polyspora DSM 70294] gi|156115883|gb|EDO17366.1| hypothetical protein Kpol_1060p22 [Vanderwaltozyma polyspora DSM 70294] Length = 256 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 3/92 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + GN +S + +KTRR +LPN+ + L S+ + +K L+++ LR++ ++GGLD + Sbjct: 75 GSFIQHGNTISESKHKTRRTWLPNIVKKALWSETLNKKVSLKMTTKVLRTISKEGGLDNY 134 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSEKSS 97 L ++ + L LR +LK + K++ Sbjct: 135 LIKEKSARIKELGPTGWKLRYAVLKGIELKNN 166 >gi|301116497|ref|XP_002905977.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262109277|gb|EEY67329.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 119 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 ++ + GN VS + +TRR + N +L S+ +++K L ++ LR V++ Sbjct: 25 AQRGLFAGRDKAFGNNVSFSKRRTRRAWKVNHQWKSLYSEALDEKVGLNVTTHTLRCVDK 84 Query: 62 QGGLDRFLSNSKK-ENLSARMRTLRSQILKKMSEK 95 GGLD +L + K L + R ++L +SE Sbjct: 85 IGGLDNYLLSIKDERELGVKGLKTRDRVLAALSEA 119 >gi|67523027|ref|XP_659574.1| hypothetical protein AN1970.2 [Aspergillus nidulans FGSC A4] gi|40745979|gb|EAA65135.1| hypothetical protein AN1970.2 [Aspergillus nidulans FGSC A4] gi|259487329|tpe|CBF85918.1| TPA: 50S ribosomal protein L24 (AFU_orthologue; AFUA_4G10740) [Aspergillus nidulans FGSC A4] Length = 203 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S N KTRR + PN+ R L S+ ++Q +++++ ALR++ + GGLD Sbjct: 60 GATIQFGNKISQGRNEGKTRRFWKPNVRRKKLWSEALQQFLFIKVTRKALRTIRKAGGLD 119 Query: 67 RFLSN---SKKENLSARMRTLRSQILK 90 ++L + ++ + L LR Q+++ Sbjct: 120 QYLLDDRPARIKELGVFGWKLRWQVMQ 146 >gi|71006194|ref|XP_757763.1| hypothetical protein UM01616.1 [Ustilago maydis 521] gi|46097136|gb|EAK82369.1| hypothetical protein UM01616.1 [Ustilago maydis 521] Length = 157 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 48/87 (55%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K + SG+ V + KT R + PN+ L S+ +++ + ++S ALRS+++ GGLD + Sbjct: 60 GKMIQSGHNVPKSRQKTARTWSPNIQSKKLWSNTLDRFVRAKVSTSALRSMDKMGGLDIY 119 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEK 95 L+ + E L R LR + ++ K Sbjct: 120 LAKTSSEKLGEWGRNLRDTLALRLRSK 146 >gi|332289487|ref|YP_004420339.1| 50S ribosomal protein L28 [Gallibacterium anatis UMN179] gi|330432383|gb|AEC17442.1| 50S ribosomal protein L28 [Gallibacterium anatis UMN179] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + + Sbjct: 61 KKG-IDAVLADLRAK 74 >gi|119943848|ref|YP_941528.1| ribosomal protein L28 [Psychromonas ingrahamii 37] gi|166226607|sp|A1SR14|RL28_PSYIN RecName: Full=50S ribosomal protein L28 gi|119862452|gb|ABM01929.1| LSU ribosomal protein L28P [Psychromonas ingrahamii 37] Length = 78 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN VSHA N+TRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNVSHAKNRTRRRFLPNLQTHRFWVESENRFVKLRLTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + + Sbjct: 61 KKG-IDSVLTDIRAK 74 >gi|242050462|ref|XP_002462975.1| hypothetical protein SORBIDRAFT_02g035620 [Sorghum bicolor] gi|241926352|gb|EER99496.1| hypothetical protein SORBIDRAFT_02g035620 [Sorghum bicolor] Length = 210 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GNKVS NK+RR + PN+ L S I ++ +++++ ALR ++ Sbjct: 44 AKRGIFAGRHIRFGNKVSEDGGNKSRRSWKPNVQEKRLFSYIHDRHIRVKVTTHALRCID 103 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GG+D +L + + M + ++KM Sbjct: 104 KAGGIDEYLLKTPYNKMDTEMGIVWKAKIEKMYS 137 >gi|284041382|ref|YP_003391312.1| ribosomal protein L28 [Spirosoma linguale DSM 74] gi|283820675|gb|ADB42513.1| ribosomal protein L28 [Spirosoma linguale DSM 74] Length = 79 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K +GN VSHANNKT+R+F PNL + + + LR++ A++++ Sbjct: 1 MARVCQITGKRTRTGNNVSHANNKTKRKFFPNLQKKRFFVESTGEWVTLRVATSAIKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G L+ L + + Sbjct: 61 KNG-LEATLQKAYER 74 >gi|284008823|emb|CBA75592.1| 50S ribosomal protein L28 [Arsenophonus nasoniae] Length = 78 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K MSGN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMSGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVKLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAELRAR 74 >gi|253991843|ref|YP_003043199.1| 50S ribosomal protein L28 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|268593308|ref|ZP_06127529.1| ribosomal protein L28 [Providencia rettgeri DSM 1131] gi|253783293|emb|CAQ86458.1| 50s ribosomal protein l28 [Photorhabdus asymbiotica] gi|291311005|gb|EFE51458.1| ribosomal protein L28 [Providencia rettgeri DSM 1131] Length = 78 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K MSGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAELRTR 74 >gi|261199896|ref|XP_002626349.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis SLH14081] gi|239594557|gb|EEQ77138.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis SLH14081] gi|239607948|gb|EEQ84935.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis ER-3] gi|327350437|gb|EGE79294.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis ATCC 18188] Length = 193 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S NK TRR + PN+ L S+ + + +L++ LR++++ GGLD Sbjct: 69 GSRIQFGNKISKGRNKGKTRRTWKPNIRHEELYSEALGKTLKLKVQHRVLRTIKKVGGLD 128 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + K Sbjct: 129 QYLLGDKPARIKELGVFGWNLRWKVMRSKAMK 160 >gi|262273496|ref|ZP_06051310.1| LSU ribosomal protein L28p [Grimontia hollisae CIP 101886] gi|262222474|gb|EEY73785.1| LSU ribosomal protein L28p [Grimontia hollisae CIP 101886] Length = 78 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K + GN SHANN T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVVGNNRSHANNATKRRFLPNLQTHRFWVESEKRFVKLRLTPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADIRAR 74 >gi|119475391|ref|ZP_01615744.1| 50S ribosomal subunit protein L28 [marine gamma proteobacterium HTCC2143] gi|119451594|gb|EAW32827.1| 50S ribosomal subunit protein L28 [marine gamma proteobacterium HTCC2143] Length = 78 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N+TRRRFLPNL R + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPITGNNVSHAKNRTRRRFLPNLHRHRFWVESEKRFVSLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLTDVRAR 74 >gi|296808247|ref|XP_002844462.1| 54S ribosomal protein L24 [Arthroderma otae CBS 113480] gi|238843945|gb|EEQ33607.1| 54S ribosomal protein L24 [Arthroderma otae CBS 113480] Length = 232 Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ L+++ LR++ + GGLD Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEELDLKVTHRVLRTINKVGGLD 130 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 131 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 162 >gi|6323847|ref|NP_013918.1| Mrpl24p [Saccharomyces cerevisiae S288c] gi|1350795|sp|P36525|RM24_YEAST RecName: Full=54S ribosomal protein L24, mitochondrial; AltName: Full=YmL14/YmL24; Flags: Precursor gi|642285|emb|CAA87814.1| ribosomal protein [Saccharomyces cerevisiae] gi|45269854|gb|AAS56308.1| YMR193W [Saccharomyces cerevisiae] gi|285814196|tpg|DAA10091.1| TPA: Mrpl24p [Saccharomyces cerevisiae S288c] Length = 258 Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 52/89 (58%), Gaps = 3/89 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V GN +S + KTR+++LPN+ + L S+ + +K ++++ L+++ ++GG+D + Sbjct: 76 GSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNY 135 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSE 94 L+ ++ + L LR ++LK+ E Sbjct: 136 LTKEKSARIKELGPTGWKLRYRVLKRKDE 164 >gi|151945896|gb|EDN64128.1| YmL14 [Saccharomyces cerevisiae YJM789] gi|190408418|gb|EDV11683.1| 60S ribosomal protein L24, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|256271573|gb|EEU06615.1| Mrpl24p [Saccharomyces cerevisiae JAY291] gi|259148778|emb|CAY82023.1| Mrpl24p [Saccharomyces cerevisiae EC1118] gi|323336086|gb|EGA77359.1| Mrpl24p [Saccharomyces cerevisiae Vin13] gi|323347014|gb|EGA81290.1| Mrpl24p [Saccharomyces cerevisiae Lalvin QA23] Length = 258 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 52/89 (58%), Gaps = 3/89 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V GN +S + KTR+++LPN+ + L S+ + +K ++++ L+++ ++GG+D + Sbjct: 76 GSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNY 135 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSE 94 L+ ++ + L LR ++LK+ E Sbjct: 136 LTKEKSARIKELGPTGWKLRYRVLKRKDE 164 >gi|88813415|ref|ZP_01128651.1| Ribosomal protein L28 [Nitrococcus mobilis Nb-231] gi|88789286|gb|EAR20417.1| Ribosomal protein L28 [Nitrococcus mobilis Nb-231] Length = 78 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K +GN VSHANNKT+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MAKVCQVTGKRPTTGNNVSHANNKTKRRFLPNLHYHRFWVETEQRWVRLRVSSKGMRIID 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|302658408|ref|XP_003020908.1| hypothetical protein TRV_04984 [Trichophyton verrucosum HKI 0517] gi|291184778|gb|EFE40290.1| hypothetical protein TRV_04984 [Trichophyton verrucosum HKI 0517] Length = 339 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 178 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVTHGVLRTINKVGGLD 237 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 238 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 269 >gi|189501983|ref|YP_001957700.1| hypothetical protein Aasi_0570 [Candidatus Amoebophilus asiaticus 5a2] gi|226738025|sp|B3ERW9|RL28_AMOA5 RecName: Full=50S ribosomal protein L28 gi|189497424|gb|ACE05971.1| hypothetical protein Aasi_0570 [Candidatus Amoebophilus asiaticus 5a2] Length = 83 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 40/66 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GNKVSHANNKT+RRF PNL LR+S +R++ Sbjct: 1 MSKVCDITGKRPRVGNKVSHANNKTKRRFYPNLQFKKFYVPETNSWIVLRVSTSVIRTIN 60 Query: 61 RQGGLD 66 ++G L+ Sbjct: 61 KKGILE 66 >gi|94499875|ref|ZP_01306411.1| ribosomal protein L28 [Oceanobacter sp. RED65] gi|94428076|gb|EAT13050.1| ribosomal protein L28 [Oceanobacter sp. RED65] Length = 78 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K ++GN VSH+N KT+RRFLPNL + + +LR S +R ++ Sbjct: 1 MAKVCQVTGKRPVTGNNVSHSNIKTKRRFLPNLQTHRFWVESENRFVKLRTSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|90415485|ref|ZP_01223419.1| 50S ribosomal protein L28 [marine gamma proteobacterium HTCC2207] gi|90332808|gb|EAS47978.1| 50S ribosomal protein L28 [marine gamma proteobacterium HTCC2207] Length = 78 Score = 91.6 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M+GN VSHA N+TRRRF PNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMAGNNVSHAKNRTRRRFEPNLHSHRFWVEAEKRFVKLRVSTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|329296439|ref|ZP_08253775.1| 50S ribosomal protein L28 [Plautia stali symbiont] Length = 78 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAEIRAR 74 >gi|254567473|ref|XP_002490847.1| 54S ribosomal protein L24, mitochondrial [Pichia pastoris GS115] gi|238030643|emb|CAY68567.1| 54S ribosomal protein L24, mitochondrial [Pichia pastoris GS115] gi|328351230|emb|CCA37630.1| 54S ribosomal protein L24, mitochondrial [Pichia pastoris CBS 7435] Length = 248 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + + GNK+S NK R++ N+ +L S+I+ + +++++ LR++ ++GGLD++ Sbjct: 73 GQFLQFGNKISEFKNKNGRKWSLNVHTKSLWSEILNKSIRVKLTARVLRTINKEGGLDQY 132 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSEK 95 L ++ + L L+ Q+L K + Sbjct: 133 LLKDKSARIKELGPTGWKLKFQLLTKKENQ 162 >gi|254515837|ref|ZP_05127897.1| ribosomal protein L28 [gamma proteobacterium NOR5-3] gi|219675559|gb|EED31925.1| ribosomal protein L28 [gamma proteobacterium NOR5-3] Length = 78 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K ++GN VSHA N+TRRRFLPNL + + ++ +LR+S +R ++ Sbjct: 1 MARVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHQHRFWVESEKRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + Sbjct: 61 KKG-IDSVLGELRAR 74 >gi|302498845|ref|XP_003011419.1| hypothetical protein ARB_02269 [Arthroderma benhamiae CBS 112371] gi|291174970|gb|EFE30779.1| hypothetical protein ARB_02269 [Arthroderma benhamiae CBS 112371] Length = 280 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T++ GNK+S NK TRR + PN+ + + S ++++ +L+++ LR++ + GGLD Sbjct: 119 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVTHGVLRTINKVGGLD 178 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L ++ + L LR +++ ++ K Sbjct: 179 EYLLGDKPARIKELGMFGWKLRWRVMTSLAMK 210 >gi|317050106|ref|YP_004117754.1| 50S ribosomal protein L28 [Pantoea sp. At-9b] gi|316951723|gb|ADU71198.1| ribosomal protein L28 [Pantoea sp. At-9b] Length = 78 Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAEIRAR 74 >gi|148906245|gb|ABR16278.1| unknown [Picea sitchensis] Length = 222 Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN +S NKTRR + PN+ L S I+++ +++++ LR ++ Sbjct: 43 AKRGLYGGRHIQFGNNISEDGGNKTRRTWKPNVQEKRLFSLILDRYIRIKVTTHTLRCID 102 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 + G +D +L L + +++ EK S Sbjct: 103 KAGCIDDYLLQMPVRKLENELALFWKVKIQQQYEKLS 139 >gi|291300851|ref|YP_003512129.1| 50S ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728] gi|290570071|gb|ADD43036.1| ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728] Length = 78 Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C++T GN VSH+ ++TRRR+ PNL R ++ +LR+S A+R+++ Sbjct: 1 MTRRCDVTGAGPGFGNSVSHSAHRTRRRWNPNLQRRRYWLPSQQRWIRLRVSAKAIRTID 60 Query: 61 RQGGLDRFLSNSKK 74 R G ++ ++ + Sbjct: 61 RDG-IEAVIARVRA 73 >gi|226951952|ref|ZP_03822416.1| 50S ribosomal protein L28 [Acinetobacter sp. ATCC 27244] gi|294649214|ref|ZP_06726652.1| 50S ribosomal protein L28 [Acinetobacter haemolyticus ATCC 19194] gi|226837290|gb|EEH69673.1| 50S ribosomal protein L28 [Acinetobacter sp. ATCC 27244] gi|292824881|gb|EFF83646.1| 50S ribosomal protein L28 [Acinetobacter haemolyticus ATCC 19194] Length = 82 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN VSHANNKT+RRF PNL + ++ +LR++ +R ++ Sbjct: 5 MSKVCQVTGKRPIVGNNVSHANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIID 64 Query: 61 RQG 63 + G Sbjct: 65 KLG 67 >gi|262040686|ref|ZP_06013924.1| 50S ribosomal protein L28 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042050|gb|EEW43083.1| 50S ribosomal protein L28 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 78 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSQVCQVTGKRPVTGNNPSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|225559900|gb|EEH08182.1| 50S ribosomal protein L24 [Ajellomyces capsulatus G186AR] gi|225559950|gb|EEH08232.1| 50S ribosomal protein L24 [Ajellomyces capsulatus G186AR] Length = 187 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + + QL++ LR++++ GGLD Sbjct: 63 GSTIQFGNKISKGRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKKVGGLD 122 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + + Sbjct: 123 QYLLGDKPARIKELGIFGWNLRWKVMQSKAMQ 154 >gi|88705461|ref|ZP_01103172.1| 50S ribosomal protein L28 [Congregibacter litoralis KT71] gi|88700551|gb|EAQ97659.1| 50S ribosomal protein L28 [Congregibacter litoralis KT71] Length = 78 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K ++GN VSHA N+TRRRFLPNL + + ++ +LR+S +R ++ Sbjct: 1 MARVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHQHRFWVESEKRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G +D L L AR + Sbjct: 61 KKG-IDTVL-----GELRARGEKV 78 >gi|312882920|ref|ZP_07742652.1| 50S ribosomal protein L28 [Vibrio caribbenthicus ATCC BAA-2122] gi|323495230|ref|ZP_08100312.1| 50S ribosomal protein L28 [Vibrio brasiliensis LMG 20546] gi|323497064|ref|ZP_08102087.1| 50S ribosomal protein L28 [Vibrio sinaloensis DSM 21326] gi|309369439|gb|EFP96959.1| 50S ribosomal protein L28 [Vibrio caribbenthicus ATCC BAA-2122] gi|323310490|gb|EGA63672.1| 50S ribosomal protein L28 [Vibrio brasiliensis LMG 20546] gi|323317908|gb|EGA70896.1| 50S ribosomal protein L28 [Vibrio sinaloensis DSM 21326] Length = 78 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADIRAN 74 >gi|330794352|ref|XP_003285243.1| hypothetical protein DICPUDRAFT_22474 [Dictyostelium purpureum] gi|325084785|gb|EGC38205.1| hypothetical protein DICPUDRAFT_22474 [Dictyostelium purpureum] Length = 127 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 ++ K ++ GN +S +N KTRR + PN+ T S+++ ++R++ +R +++ Sbjct: 19 AQRGLYGGKDILFGNILSFSNKKTRRDWKPNVHNKTYHSNLLGTDIRVRVTSYVIRCIDK 78 Query: 62 QGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 G D ++ +K ++L S L+ + + K+ Sbjct: 79 AGSFDNYIVQTKDKDLQSELGSELKVAMKNVLKSKA 114 >gi|113460291|ref|YP_718350.1| 50S ribosomal protein L28 [Haemophilus somnus 129PT] gi|170717208|ref|YP_001783365.1| 50S ribosomal protein L28 [Haemophilus somnus 2336] gi|122945106|sp|Q0I0X8|RL28_HAES1 RecName: Full=50S ribosomal protein L28 gi|189029444|sp|B0UUW8|RL28_HAES2 RecName: Full=50S ribosomal protein L28 gi|112822334|gb|ABI24423.1| LSU ribosomal protein L28P [Haemophilus somnus 129PT] gi|168825337|gb|ACA30708.1| ribosomal protein L28 [Haemophilus somnus 2336] Length = 78 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATRRRFLPNLHTHRFWVESEKRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|329896523|ref|ZP_08271581.1| LSU ribosomal protein L28p [gamma proteobacterium IMCC3088] gi|328921740|gb|EGG29113.1| LSU ribosomal protein L28p [gamma proteobacterium IMCC3088] Length = 78 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N+TRRRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHSHRFWVESEKRFVRLRVSSKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KRG-IDTVLAELRAR 74 >gi|319775113|ref|YP_004137601.1| 50S ribosomal subunit protein L28 [Haemophilus influenzae F3047] gi|329122973|ref|ZP_08251544.1| 50S ribosomal protein L28 [Haemophilus aegyptius ATCC 11116] gi|317449704|emb|CBY85911.1| 50S ribosomal subunit protein L28 [Haemophilus influenzae F3047] gi|327471904|gb|EGF17344.1| 50S ribosomal protein L28 [Haemophilus aegyptius ATCC 11116] Length = 78 Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N RRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNAARRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|260779660|ref|ZP_05888550.1| LSU ribosomal protein L28p [Vibrio coralliilyticus ATCC BAA-450] gi|261250534|ref|ZP_05943109.1| LSU ribosomal protein L28p [Vibrio orientalis CIP 102891] gi|260604469|gb|EEX30773.1| LSU ribosomal protein L28p [Vibrio coralliilyticus ATCC BAA-450] gi|260939103|gb|EEX95090.1| LSU ribosomal protein L28p [Vibrio orientalis CIP 102891] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDAVLVDIRAN 74 >gi|110833076|ref|YP_691935.1| 50S ribosomal protein L28 [Alcanivorax borkumensis SK2] gi|123345877|sp|Q0VT57|RL28_ALCBS RecName: Full=50S ribosomal protein L28 gi|110646187|emb|CAL15663.1| ribosomal protein L28 [Alcanivorax borkumensis SK2] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN+VSH+N KT+RRF PNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPVTGNRVSHSNIKTKRRFEPNLHHHRFWVESEKRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLADIRSR 74 >gi|15603016|ref|NP_246088.1| 50S ribosomal protein L28 [Pasteurella multocida subsp. multocida str. Pm70] gi|260912779|ref|ZP_05919265.1| 50S ribosomal protein L28 [Pasteurella dagmatis ATCC 43325] gi|14195119|sp|Q9CLR1|RL28_PASMU RecName: Full=50S ribosomal protein L28 gi|12721499|gb|AAK03235.1| RpL28 [Pasteurella multocida subsp. multocida str. Pm70] gi|260633157|gb|EEX51322.1| 50S ribosomal protein L28 [Pasteurella dagmatis ATCC 43325] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEKRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDAVLADIRAR 74 >gi|240276199|gb|EER39711.1| 50S ribosomal protein L24 [Ajellomyces capsulatus H143] gi|325089935|gb|EGC43245.1| 50S ribosomal protein [Ajellomyces capsulatus H88] Length = 187 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + + QL++ LR++++ GGLD Sbjct: 63 GSTIQFGNKISKGRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKKVGGLD 122 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + + Sbjct: 123 QYLLGDKPARIKELGIFGWNLRWKVMQSKAMQ 154 >gi|290477299|ref|YP_003470220.1| 50S ribosomal subunit protein L28 [Xenorhabdus bovienii SS-2004] gi|289176653|emb|CBJ83462.1| 50S ribosomal subunit protein L28 [Xenorhabdus bovienii SS-2004] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVTAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDVVLAELRAR 74 >gi|254427932|ref|ZP_05041639.1| ribosomal protein L28 [Alcanivorax sp. DG881] gi|196194101|gb|EDX89060.1| ribosomal protein L28 [Alcanivorax sp. DG881] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN+VSH+N KT+RRF PNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPVTGNRVSHSNIKTKRRFEPNLHHHRFWVESEKRFVRLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ + Sbjct: 61 KKG-IDSVLSDIRSR 74 >gi|37528673|ref|NP_932018.1| 50S ribosomal protein L28 [Photorhabdus luminescens subsp. laumondii TTO1] gi|67461490|sp|Q7MY29|RL28_PHOLL RecName: Full=50S ribosomal protein L28 gi|36788112|emb|CAE17236.1| 50S ribosomal protein L28 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 78 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K MSGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSVKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAELRTR 74 >gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 EDL933] gi|15833766|ref|NP_312539.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 str. Sakai] gi|16131508|ref|NP_418094.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. MG1655] gi|24114906|ref|NP_709416.1| 50S ribosomal protein L28 [Shigella flexneri 2a str. 301] gi|26250283|ref|NP_756323.1| 50S ribosomal protein L28 [Escherichia coli CFT073] gi|30065087|ref|NP_839258.1| 50S ribosomal protein L28 [Shigella flexneri 2a str. 2457T] gi|74314129|ref|YP_312548.1| 50S ribosomal protein L28 [Shigella sonnei Ss046] gi|82779127|ref|YP_405476.1| 50S ribosomal protein L28 [Shigella dysenteriae Sd197] gi|89110374|ref|AP_004154.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. W3110] gi|91213154|ref|YP_543140.1| 50S ribosomal protein L28 [Escherichia coli UTI89] gi|110643878|ref|YP_671608.1| 50S ribosomal protein L28 [Escherichia coli 536] gi|152972483|ref|YP_001337629.1| 50S ribosomal protein L28 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|157155847|ref|YP_001465117.1| 50S ribosomal protein L28 [Escherichia coli E24377A] gi|157163118|ref|YP_001460436.1| 50S ribosomal protein L28 [Escherichia coli HS] gi|168748715|ref|ZP_02773737.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4113] gi|168753461|ref|ZP_02778468.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4401] gi|168759734|ref|ZP_02784741.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4501] gi|168766057|ref|ZP_02791064.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4486] gi|168772397|ref|ZP_02797404.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4196] gi|168779792|ref|ZP_02804799.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4076] gi|168785513|ref|ZP_02810520.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC869] gi|168798582|ref|ZP_02823589.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC508] gi|170018133|ref|YP_001723087.1| 50S ribosomal protein L28 [Escherichia coli ATCC 8739] gi|170083145|ref|YP_001732465.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. DH10B] gi|170680615|ref|YP_001745937.1| 50S ribosomal protein L28 [Escherichia coli SMS-3-5] gi|187732138|ref|YP_001882334.1| 50S ribosomal protein L28 [Shigella boydii CDC 3083-94] gi|188496045|ref|ZP_03003315.1| ribosomal protein L28 [Escherichia coli 53638] gi|191167810|ref|ZP_03029616.1| ribosomal protein L28 [Escherichia coli B7A] gi|191170547|ref|ZP_03032100.1| ribosomal protein L28 [Escherichia coli F11] gi|193063777|ref|ZP_03044864.1| ribosomal protein L28 [Escherichia coli E22] gi|193070349|ref|ZP_03051291.1| ribosomal protein L28 [Escherichia coli E110019] gi|194431236|ref|ZP_03063529.1| ribosomal protein L28 [Shigella dysenteriae 1012] gi|194435684|ref|ZP_03067787.1| ribosomal protein L28 [Escherichia coli 101-1] gi|195936198|ref|ZP_03081580.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 str. EC4024] gi|208812807|ref|ZP_03254136.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4045] gi|208818638|ref|ZP_03258958.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4042] gi|209397282|ref|YP_002273115.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4115] gi|209921108|ref|YP_002295192.1| 50S ribosomal protein L28 [Escherichia coli SE11] gi|215488916|ref|YP_002331347.1| 50S ribosomal protein L28 [Escherichia coli O127:H6 str. E2348/69] gi|217324332|ref|ZP_03440416.1| ribosomal protein L28 [Escherichia coli O157:H7 str. TW14588] gi|218551165|ref|YP_002384956.1| 50S ribosomal protein L28 [Escherichia fergusonii ATCC 35469] gi|218556199|ref|YP_002389112.1| 50S ribosomal protein L28 [Escherichia coli IAI1] gi|218560709|ref|YP_002393622.1| 50S ribosomal protein L28 [Escherichia coli S88] gi|218691921|ref|YP_002400133.1| 50S ribosomal protein L28 [Escherichia coli ED1a] gi|218697358|ref|YP_002405025.1| 50S ribosomal protein L28 [Escherichia coli 55989] gi|218702403|ref|YP_002410032.1| 50S ribosomal protein L28 [Escherichia coli IAI39] gi|218707271|ref|YP_002414790.1| 50S ribosomal protein L28 [Escherichia coli UMN026] gi|237703408|ref|ZP_04533889.1| 50S ribosomal subunit protein L28 [Escherichia sp. 3_2_53FAA] gi|238897078|ref|YP_002921824.1| 50S ribosomal protein L28 [Klebsiella pneumoniae NTUH-K2044] gi|238902728|ref|YP_002928524.1| 50S ribosomal subunit protein L28 [Escherichia coli BW2952] gi|253771522|ref|YP_003034353.1| 50S ribosomal protein L28 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038836|ref|ZP_04872888.1| ribosomal protein L28 [Escherichia sp. 1_1_43] gi|254163565|ref|YP_003046673.1| 50S ribosomal protein L28 [Escherichia coli B str. REL606] gi|254795592|ref|YP_003080429.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 str. TW14359] gi|256021359|ref|ZP_05435224.1| 50S ribosomal protein L28 [Shigella sp. D9] gi|256025633|ref|ZP_05439498.1| 50S ribosomal protein L28 [Escherichia sp. 4_1_40B] gi|260846598|ref|YP_003224376.1| 50S ribosomal subunit protein L28 [Escherichia coli O103:H2 str. 12009] gi|260857968|ref|YP_003231859.1| 50S ribosomal subunit protein L28 [Escherichia coli O26:H11 str. 11368] gi|260870367|ref|YP_003236769.1| 50S ribosomal subunit protein L28 [Escherichia coli O111:H- str. 11128] gi|261224180|ref|ZP_05938461.1| 50S ribosomal subunit protein L28 [Escherichia coli O157:H7 str. FRIK2000] gi|261254791|ref|ZP_05947324.1| 50S ribosomal subunit protein L28 [Escherichia coli O157:H7 str. FRIK966] gi|291285008|ref|YP_003501826.1| 50S ribosomal protein L28 [Escherichia coli O55:H7 str. CB9615] gi|293407260|ref|ZP_06651184.1| LSU ribosomal protein L28p [Escherichia coli FVEC1412] gi|293413071|ref|ZP_06655739.1| conserved hypothetical protein [Escherichia coli B354] gi|293417098|ref|ZP_06659725.1| large subunit ribosomal protein L28 [Escherichia coli B185] gi|293463961|ref|ZP_06664375.1| 50S ribosomal protein L28 [Escherichia coli B088] gi|297521447|ref|ZP_06939833.1| 50S ribosomal protein L28 [Escherichia coli OP50] gi|298383006|ref|ZP_06992601.1| 50S ribosomal protein L28 [Escherichia coli FVEC1302] gi|306816015|ref|ZP_07450153.1| 50S ribosomal protein L28 [Escherichia coli NC101] gi|307140335|ref|ZP_07499691.1| 50S ribosomal protein L28 [Escherichia coli H736] gi|307314278|ref|ZP_07593886.1| ribosomal protein L28 [Escherichia coli W] gi|331644355|ref|ZP_08345484.1| ribosomal protein L28 [Escherichia coli H736] gi|331649452|ref|ZP_08350538.1| ribosomal protein L28 [Escherichia coli M605] gi|331655269|ref|ZP_08356268.1| ribosomal protein L28 [Escherichia coli M718] gi|331659957|ref|ZP_08360895.1| ribosomal protein L28 [Escherichia coli TA206] gi|331665262|ref|ZP_08366163.1| ribosomal protein L28 [Escherichia coli TA143] gi|331670477|ref|ZP_08371316.1| ribosomal protein L28 [Escherichia coli TA271] gi|331675117|ref|ZP_08375874.1| ribosomal protein L28 [Escherichia coli TA280] gi|331679728|ref|ZP_08380398.1| ribosomal protein L28 [Escherichia coli H591] gi|331685300|ref|ZP_08385886.1| ribosomal protein L28 [Escherichia coli H299] gi|332282593|ref|ZP_08395006.1| 50S ribosomal subunit protein L28 [Shigella sp. D9] gi|67472014|sp|P0A7M2|RL28_ECOLI RecName: Full=50S ribosomal protein L28 gi|67472015|sp|P0A7M3|RL28_ECOL6 RecName: Full=50S ribosomal protein L28 gi|67472016|sp|P0A7M4|RL28_ECO57 RecName: Full=50S ribosomal protein L28 gi|67472017|sp|P0A7M5|RL28_SHIFL RecName: Full=50S ribosomal protein L28 gi|122421887|sp|Q1R4V5|RL28_ECOUT RecName: Full=50S ribosomal protein L28 gi|123343463|sp|Q0TBH2|RL28_ECOL5 RecName: Full=50S ribosomal protein L28 gi|123561125|sp|Q329M0|RL28_SHIDS RecName: Full=50S ribosomal protein L28 gi|123615831|sp|Q3YVZ9|RL28_SHISS RecName: Full=50S ribosomal protein L28 gi|166226582|sp|A6TFM8|RL28_KLEP7 RecName: Full=50S ribosomal protein L28 gi|166987910|sp|A7ZTI8|RL28_ECO24 RecName: Full=50S ribosomal protein L28 gi|166987911|sp|A8A699|RL28_ECOHS RecName: Full=50S ribosomal protein L28 gi|189029439|sp|B1IZF6|RL28_ECOLC RecName: Full=50S ribosomal protein L28 gi|226694559|sp|B7NPZ8|RL28_ECO7I RecName: Full=50S ribosomal protein L28 gi|226694669|sp|B7M4C1|RL28_ECO8A RecName: Full=50S ribosomal protein L28 gi|226694688|sp|B1X971|RL28_ECODH RecName: Full=50S ribosomal protein L28 gi|226694704|sp|B7NEU1|RL28_ECOLU RecName: Full=50S ribosomal protein L28 gi|226694756|sp|B6I3L4|RL28_ECOSE RecName: Full=50S ribosomal protein L28 gi|226694761|sp|B1LK74|RL28_ECOSM RecName: Full=50S ribosomal protein L28 gi|226694789|sp|B7LVJ8|RL28_ESCF3 RecName: Full=50S ribosomal protein L28 gi|226699166|sp|B2TTV1|RL28_SHIB3 RecName: Full=50S ribosomal protein L28 gi|226732829|sp|B7MFJ8|RL28_ECO45 RecName: Full=50S ribosomal protein L28 gi|226732830|sp|B5YWD5|RL28_ECO5E RecName: Full=50S ribosomal protein L28 gi|254801358|sp|B7ULJ2|RL28_ECO27 RecName: Full=50S ribosomal protein L28 gi|254801359|sp|B7L760|RL28_ECO55 RecName: Full=50S ribosomal protein L28 gi|254801360|sp|B7N277|RL28_ECO81 RecName: Full=50S ribosomal protein L28 gi|259646735|sp|C4ZXM9|RL28_ECOBW RecName: Full=50S ribosomal protein L28 gi|157836074|pdb|2QOV|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836126|pdb|2QOX|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836178|pdb|2QOZ|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836230|pdb|2QP1|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429749|pdb|2QAM|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429801|pdb|2QAO|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429859|pdb|2QBA|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429911|pdb|2QBC|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429963|pdb|2QBE|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430016|pdb|2QBG|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430069|pdb|2QBI|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430122|pdb|2QBK|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431422|pdb|2Z4L|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431475|pdb|2Z4N|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|197107324|pdb|3DF2|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107376|pdb|3DF4|Z Chain Z, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|257097365|pdb|3I1N|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097417|pdb|3I1P|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097471|pdb|3I1R|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097525|pdb|3I1T|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097580|pdb|3I20|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097635|pdb|3I22|X Chain X, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560355|pdb|3KCR|X Chain X, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|308198378|pdb|1VT2|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198752|pdb|3ORB|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|326634233|pdb|3IZT|Y Chain Y, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634266|pdb|3IZU|Y Chain Y, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|12518393|gb|AAG58781.1|AE005591_5 50S ribosomal subunit protein L28 [Escherichia coli O157:H7 str. EDL933] gi|26110713|gb|AAN82897.1|AE016769_12 50S ribosomal protein L28 [Escherichia coli CFT073] gi|147708|gb|AAA74099.1| ribosomal protein L28 [Escherichia coli] gi|290487|gb|AAA61990.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|1790068|gb|AAC76661.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. MG1655] gi|13363987|dbj|BAB37935.1| 50S ribosomal subunit protein L28 [Escherichia coli O157:H7 str. Sakai] gi|24054148|gb|AAN45123.1| 50S ribosomal subunit protein L28 [Shigella flexneri 2a str. 301] gi|30043348|gb|AAP19069.1| 50S ribosomal subunit protein L28 [Shigella flexneri 2a str. 2457T] gi|73857606|gb|AAZ90313.1| 50S ribosomal subunit protein L28 [Shigella sonnei Ss046] gi|81243275|gb|ABB63985.1| 50S ribosomal subunit protein L28 [Shigella dysenteriae Sd197] gi|85676405|dbj|BAE77655.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K12 substr. W3110] gi|91074728|gb|ABE09609.1| 50S ribosomal subunit protein L28 [Escherichia coli UTI89] gi|110345470|gb|ABG71707.1| 50S ribosomal protein L28 [Escherichia coli 536] gi|150957332|gb|ABR79362.1| 50S ribosomal protein L28 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|157068798|gb|ABV08053.1| ribosomal protein L28 [Escherichia coli HS] gi|157077877|gb|ABV17585.1| ribosomal protein L28 [Escherichia coli E24377A] gi|169753061|gb|ACA75760.1| ribosomal protein L28 [Escherichia coli ATCC 8739] gi|169890980|gb|ACB04687.1| 50S ribosomal subunit protein L28 [Escherichia coli str. K-12 substr. DH10B] gi|170518333|gb|ACB16511.1| ribosomal protein L28 [Escherichia coli SMS-3-5] gi|187429130|gb|ACD08404.1| ribosomal protein L28 [Shigella boydii CDC 3083-94] gi|187771406|gb|EDU35250.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4196] gi|188016990|gb|EDU55112.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4113] gi|188491244|gb|EDU66347.1| ribosomal protein L28 [Escherichia coli 53638] gi|189002221|gb|EDU71207.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4076] gi|189359118|gb|EDU77537.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4401] gi|189364784|gb|EDU83203.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4486] gi|189369658|gb|EDU88074.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4501] gi|189374402|gb|EDU92818.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC869] gi|189378795|gb|EDU97211.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC508] gi|190902153|gb|EDV61896.1| ribosomal protein L28 [Escherichia coli B7A] gi|190909355|gb|EDV68941.1| ribosomal protein L28 [Escherichia coli F11] gi|192930492|gb|EDV83099.1| ribosomal protein L28 [Escherichia coli E22] gi|192956288|gb|EDV86749.1| ribosomal protein L28 [Escherichia coli E110019] gi|194420691|gb|EDX36767.1| ribosomal protein L28 [Shigella dysenteriae 1012] gi|194425227|gb|EDX41211.1| ribosomal protein L28 [Escherichia coli 101-1] gi|208734084|gb|EDZ82771.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4045] gi|208738761|gb|EDZ86443.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4042] gi|209158682|gb|ACI36115.1| ribosomal protein L28 [Escherichia coli O157:H7 str. EC4115] gi|209754648|gb|ACI75636.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|209754650|gb|ACI75637.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|209754652|gb|ACI75638.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|209754654|gb|ACI75639.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|209754656|gb|ACI75640.1| 50S ribosomal subunit protein L28 [Escherichia coli] gi|209914367|dbj|BAG79441.1| 50S ribosomal protein L28 [Escherichia coli SE11] gi|215266988|emb|CAS11433.1| 50S ribosomal subunit protein L28 [Escherichia coli O127:H6 str. E2348/69] gi|217320553|gb|EEC28977.1| ribosomal protein L28 [Escherichia coli O157:H7 str. TW14588] gi|218354090|emb|CAV00641.1| 50S ribosomal subunit protein L28 [Escherichia coli 55989] gi|218358706|emb|CAQ91362.1| 50S ribosomal subunit protein L28 [Escherichia fergusonii ATCC 35469] gi|218362967|emb|CAR00604.1| 50S ribosomal subunit protein L28 [Escherichia coli IAI1] gi|218367478|emb|CAR05260.1| 50S ribosomal subunit protein L28 [Escherichia coli S88] gi|218372389|emb|CAR20263.1| 50S ribosomal subunit protein L28 [Escherichia coli IAI39] gi|218429485|emb|CAR10448.2| 50S ribosomal subunit protein L28 [Escherichia coli ED1a] gi|218434368|emb|CAR15292.1| 50S ribosomal subunit protein L28 [Escherichia coli UMN026] gi|222035345|emb|CAP78090.1| 50S ribosomal protein L28 [Escherichia coli LF82] gi|226838801|gb|EEH70828.1| ribosomal protein L28 [Escherichia sp. 1_1_43] gi|226902672|gb|EEH88931.1| 50S ribosomal subunit protein L28 [Escherichia sp. 3_2_53FAA] gi|238549406|dbj|BAH65757.1| 50S ribosomal protein L28 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|238859866|gb|ACR61864.1| 50S ribosomal subunit protein L28 [Escherichia coli BW2952] gi|242379161|emb|CAQ33963.1| 50S ribosomal subunit protein L28, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322566|gb|ACT27168.1| ribosomal protein L28 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975466|gb|ACT41137.1| 50S ribosomal protein L28 [Escherichia coli B str. REL606] gi|253979622|gb|ACT45292.1| 50S ribosomal protein L28 [Escherichia coli BL21(DE3)] gi|254594992|gb|ACT74353.1| 50S ribosomal subunit protein L28 [Escherichia coli O157:H7 str. TW14359] gi|257756617|dbj|BAI28119.1| 50S ribosomal subunit protein L28 [Escherichia coli O26:H11 str. 11368] gi|257761745|dbj|BAI33242.1| 50S ribosomal subunit protein L28 [Escherichia coli O103:H2 str. 12009] gi|257766723|dbj|BAI38218.1| 50S ribosomal subunit protein L28 [Escherichia coli O111:H- str. 11128] gi|260447344|gb|ACX37766.1| ribosomal protein L28 [Escherichia coli DH1] gi|281180683|dbj|BAI57013.1| 50S ribosomal protein L28 [Escherichia coli SE15] gi|281603000|gb|ADA75984.1| 50S ribosomal protein L28 [Shigella flexneri 2002017] gi|284923670|emb|CBG36767.1| 50S ribosomal subunit protein L28 [Escherichia coli 042] gi|290764881|gb|ADD58842.1| 50S ribosomal protein L28 [Escherichia coli O55:H7 str. CB9615] gi|291321593|gb|EFE61029.1| 50S ribosomal protein L28 [Escherichia coli B088] gi|291426071|gb|EFE99105.1| LSU ribosomal protein L28p [Escherichia coli FVEC1412] gi|291431129|gb|EFF04122.1| large subunit ribosomal protein L28 [Escherichia coli B185] gi|291468718|gb|EFF11211.1| conserved hypothetical protein [Escherichia coli B354] gi|294490585|gb|ADE89341.1| ribosomal protein L28 [Escherichia coli IHE3034] gi|298276842|gb|EFI18360.1| 50S ribosomal protein L28 [Escherichia coli FVEC1302] gi|305850411|gb|EFM50868.1| 50S ribosomal protein L28 [Escherichia coli NC101] gi|306906101|gb|EFN36620.1| ribosomal protein L28 [Escherichia coli W] gi|307555736|gb|ADN48511.1| 50S ribosomal subunit protein L28 [Escherichia coli ABU 83972] gi|307628710|gb|ADN73014.1| 50S ribosomal protein L28 [Escherichia coli UM146] gi|309704039|emb|CBJ03385.1| 50S ribosomal subunit protein L28 [Escherichia coli ETEC H10407] gi|312948198|gb|ADR29025.1| 50S ribosomal protein L28 [Escherichia coli O83:H1 str. NRG 857C] gi|313647489|gb|EFS11939.1| ribosomal protein L28 [Shigella flexneri 2a str. 2457T] gi|315062925|gb|ADT77252.1| 50S ribosomal subunit protein L28 [Escherichia coli W] gi|315138219|dbj|BAJ45378.1| 50S ribosomal protein L28 [Escherichia coli DH1] gi|315618660|gb|EFU99246.1| ribosomal protein L28 [Escherichia coli 3431] gi|320644983|gb|EFX14013.1| 50S ribosomal protein L28 [Escherichia coli O157:H- str. 493-89] gi|320650250|gb|EFX18739.1| 50S ribosomal protein L28 [Escherichia coli O157:H- str. H 2687] gi|320655602|gb|EFX23530.1| 50S ribosomal protein L28 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661336|gb|EFX28760.1| 50S ribosomal protein L28 [Escherichia coli O55:H7 str. USDA 5905] gi|320666350|gb|EFX33349.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 str. LSU-61] gi|323173230|gb|EFZ58859.1| ribosomal protein L28 [Escherichia coli LT-68] gi|323376482|gb|ADX48750.1| ribosomal protein L28 [Escherichia coli KO11] gi|323934818|gb|EGB31200.1| ribosomal L28 family protein [Escherichia coli E1520] gi|323939604|gb|EGB35810.1| ribosomal L28 family protein [Escherichia coli E482] gi|323944090|gb|EGB40170.1| ribosomal L28 family protein [Escherichia coli H120] gi|323949876|gb|EGB45760.1| ribosomal L28 family protein [Escherichia coli H252] gi|323954823|gb|EGB50603.1| ribosomal L28 family protein [Escherichia coli H263] gi|323959885|gb|EGB55533.1| ribosomal L28 family protein [Escherichia coli H489] gi|323965903|gb|EGB61351.1| ribosomal L28 family protein [Escherichia coli M863] gi|323971279|gb|EGB66524.1| ribosomal L28 family protein [Escherichia coli TA007] gi|323975143|gb|EGB70248.1| ribosomal L28 family protein [Escherichia coli TW10509] gi|324111531|gb|EGC05512.1| ribosomal L28 family protein [Escherichia fergusonii B253] gi|324116024|gb|EGC09950.1| ribosomal L28 family protein [Escherichia coli E1167] gi|331036649|gb|EGI08875.1| ribosomal protein L28 [Escherichia coli H736] gi|331041950|gb|EGI14094.1| ribosomal protein L28 [Escherichia coli M605] gi|331047284|gb|EGI19362.1| ribosomal protein L28 [Escherichia coli M718] gi|331053172|gb|EGI25205.1| ribosomal protein L28 [Escherichia coli TA206] gi|331057772|gb|EGI29758.1| ribosomal protein L28 [Escherichia coli TA143] gi|331062539|gb|EGI34459.1| ribosomal protein L28 [Escherichia coli TA271] gi|331068026|gb|EGI39424.1| ribosomal protein L28 [Escherichia coli TA280] gi|331072900|gb|EGI44225.1| ribosomal protein L28 [Escherichia coli H591] gi|331077671|gb|EGI48883.1| ribosomal protein L28 [Escherichia coli H299] gi|332084501|gb|EGI89696.1| ribosomal protein L28 [Shigella dysenteriae 155-74] gi|332104945|gb|EGJ08291.1| 50S ribosomal subunit protein L28 [Shigella sp. D9] gi|332749908|gb|EGJ80320.1| ribosomal protein L28 [Shigella flexneri K-671] gi|332750594|gb|EGJ81002.1| ribosomal protein L28 [Shigella flexneri 4343-70] Length = 78 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|145301063|ref|YP_001143904.1| 50S ribosomal protein L28 [Aeromonas salmonicida subsp. salmonicida A449] gi|166226536|sp|A4STD4|RL28_AERS4 RecName: Full=50S ribosomal protein L28 gi|142853835|gb|ABO92156.1| ribosomal protein L28 [Aeromonas salmonicida subsp. salmonicida A449] Length = 78 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHANN T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHANNATKRRFLPNLHTHRFWVEGEKRFVSLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|119503523|ref|ZP_01625606.1| 50S ribosomal subunit protein L28 [marine gamma proteobacterium HTCC2080] gi|119460585|gb|EAW41677.1| 50S ribosomal subunit protein L28 [marine gamma proteobacterium HTCC2080] Length = 78 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N+TRRRFLPNL + ++ LRIS +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHNHRFWVESEKRFVSLRISPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G +D L+ L +R + Sbjct: 61 KRG-IDTVLA-----ELRSRGEKV 78 >gi|294637896|ref|ZP_06716165.1| ribosomal protein L28 [Edwardsiella tarda ATCC 23685] gi|291088922|gb|EFE21483.1| ribosomal protein L28 [Edwardsiella tarda ATCC 23685] Length = 78 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IEAVLADLRAR 74 >gi|262201431|ref|YP_003272639.1| 50S ribosomal protein L28 [Gordonia bronchialis DSM 43247] gi|262084778|gb|ACY20746.1| ribosomal protein L28 [Gordonia bronchialis DSM 43247] Length = 78 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T T GN+VSH++ KTRRR+ PN+ R ++ L +S L++++ Sbjct: 1 MSARCQVTGATPGFGNRVSHSHRKTRRRWNPNIQRRRFYIPAEDRHITLNVSAKGLKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ L+ + Sbjct: 61 RHG-IESVLATIRAR 74 >gi|260599934|ref|YP_003212505.1| 50S ribosomal protein L28 [Cronobacter turicensis z3032] gi|260219111|emb|CBA34466.1| 50S ribosomal protein L28 [Cronobacter turicensis z3032] Length = 80 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 3 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 62 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS + Sbjct: 63 KKG-IDVVLSELRAR 76 >gi|88859002|ref|ZP_01133643.1| 50S ribosomal protein L28 [Pseudoalteromonas tunicata D2] gi|88819228|gb|EAR29042.1| 50S ribosomal protein L28 [Pseudoalteromonas tunicata D2] Length = 78 Score = 90.5 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GN SHA N T+RRFLPNL + + +LR++ +R ++ Sbjct: 1 MSKVCQVTGKRPAVGNNRSHALNATKRRFLPNLQTHRFWVESENRFVKLRLTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLTEIRAR 74 >gi|226507934|ref|NP_001149701.1| 60S ribosomal protein L24 [Zea mays] gi|195629596|gb|ACG36439.1| 60S ribosomal protein L24 [Zea mays] Length = 210 Score = 90.5 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GNKVS NK+RR + PN+ L S I ++ +++++ ALR ++ Sbjct: 44 AKRGIFAGRHIRFGNKVSEDGGNKSRRSWKPNVQEKRLFSYIHDRHIRVKVTTHALRCID 103 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GG+D +L + + M + ++KM Sbjct: 104 KAGGIDEYLLKTPYNKMDTEMGIVWKAKIEKMYS 137 >gi|260774467|ref|ZP_05883381.1| LSU ribosomal protein L28p [Vibrio metschnikovii CIP 69.14] gi|260610594|gb|EEX35799.1| LSU ribosomal protein L28p [Vibrio metschnikovii CIP 69.14] Length = 78 Score = 90.5 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPITGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDAVLVDIRAR 74 >gi|134074563|emb|CAK38856.1| unnamed protein product [Aspergillus niger] Length = 299 Score = 90.5 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 156 GAMIQFGNKISQGRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRKALRTIRKAGGLD 215 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + LR +I++ Sbjct: 216 NYLLSDRPGRIREMGIFGWELRWKIMQ 242 >gi|169771529|ref|XP_001820234.1| 50S ribosomal protein L24 [Aspergillus oryzae RIB40] gi|238485896|ref|XP_002374186.1| 50S ribosomal protein L24 [Aspergillus flavus NRRL3357] gi|83768093|dbj|BAE58232.1| unnamed protein product [Aspergillus oryzae] gi|220699065|gb|EED55404.1| 50S ribosomal protein L24 [Aspergillus flavus NRRL3357] Length = 212 Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R + S+ +++ +++++ ALR++ + GGLD Sbjct: 69 GVMIQFGNKISKGRNEGKTRRFWKPNVRRKKIYSEALDEWLFIKVTRKALRTIRKSGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + L LR ++++ Sbjct: 129 NYLLDDRPGRVKELGVFGWQLRWKVMQ 155 >gi|320533926|ref|ZP_08034498.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133859|gb|EFW26235.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337] Length = 82 Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T + G VSH++ +T RR+ PNL R + + +L +S +R+++ Sbjct: 4 MTTYCQVTGARPVFGRSVSHSHKRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTID 63 Query: 61 RQGGLDRFLSN--SKKENLS 78 + G +D ++ ++ E LS Sbjct: 64 KLG-IDVVVAQMLARGEKLS 82 >gi|45439916|ref|NP_991455.1| 50S ribosomal protein L28 [Yersinia pestis biovar Microtus str. 91001] gi|51594405|ref|YP_068596.1| 50S ribosomal protein L28 [Yersinia pseudotuberculosis IP 32953] gi|108809483|ref|YP_653399.1| 50S ribosomal protein L28 [Yersinia pestis Antiqua] gi|108813960|ref|YP_649727.1| 50S ribosomal protein L28 [Yersinia pestis Nepal516] gi|145601095|ref|YP_001165171.1| 50S ribosomal protein L28 [Yersinia pestis Pestoides F] gi|150260886|ref|ZP_01917614.1| 50S ribosomal protein L28 [Yersinia pestis CA88-4125] gi|153948103|ref|YP_001399063.1| 50S ribosomal protein L28 [Yersinia pseudotuberculosis IP 31758] gi|162421887|ref|YP_001604696.1| 50S ribosomal protein L28 [Yersinia pestis Angola] gi|165926158|ref|ZP_02221990.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. F1991016] gi|165936126|ref|ZP_02224695.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. IP275] gi|166011434|ref|ZP_02232332.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213673|ref|ZP_02239708.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. B42003004] gi|167402130|ref|ZP_02307607.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419031|ref|ZP_02310784.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426680|ref|ZP_02318433.1| ribosomal protein L28 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026361|ref|YP_001722866.1| 50S ribosomal protein L28 [Yersinia pseudotuberculosis YPIII] gi|186893393|ref|YP_001870505.1| 50S ribosomal protein L28 [Yersinia pseudotuberculosis PB1/+] gi|218927271|ref|YP_002345146.1| 50S ribosomal protein L28 [Yersinia pestis CO92] gi|229836163|ref|ZP_04456331.1| 50S ribosomal subunit protein L28 [Yersinia pestis Pestoides A] gi|229839899|ref|ZP_04460058.1| 50S ribosomal subunit protein L28 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841981|ref|ZP_04462136.1| 50S ribosomal subunit protein L28 [Yersinia pestis biovar Orientalis str. India 195] gi|229904490|ref|ZP_04519601.1| 50S ribosomal subunit protein L28 [Yersinia pestis Nepal516] gi|270488489|ref|ZP_06205563.1| ribosomal protein L28 [Yersinia pestis KIM D27] gi|20139509|sp|Q8ZJP2|RL28_YERPE RecName: Full=50S ribosomal protein L28 gi|67461380|sp|Q66GD5|RL28_YERPS RecName: Full=50S ribosomal protein L28 gi|122382630|sp|Q1C268|RL28_YERPA RecName: Full=50S ribosomal protein L28 gi|122384027|sp|Q1CD03|RL28_YERPN RecName: Full=50S ribosomal protein L28 gi|166228174|sp|A4TSD6|RL28_YERPP RecName: Full=50S ribosomal protein L28 gi|166987918|sp|A7FCT5|RL28_YERP3 RecName: Full=50S ribosomal protein L28 gi|226699188|sp|B2JYN4|RL28_YERPB RecName: Full=50S ribosomal protein L28 gi|226699189|sp|A9R675|RL28_YERPG RecName: Full=50S ribosomal protein L28 gi|226699190|sp|B1JQX2|RL28_YERPY RecName: Full=50S ribosomal protein L28 gi|45434771|gb|AAS60332.1| 50S ribosomal protein L28 [Yersinia pestis biovar Microtus str. 91001] gi|51587687|emb|CAH19287.1| 50S ribosomal protein L28 [Yersinia pseudotuberculosis IP 32953] gi|108777608|gb|ABG20127.1| LSU ribosomal protein L28P [Yersinia pestis Nepal516] gi|108781396|gb|ABG15454.1| LSU ribosomal protein L28P [Yersinia pestis Antiqua] gi|115345882|emb|CAL18740.1| 50S ribosomal protein L28 [Yersinia pestis CO92] gi|145212791|gb|ABP42198.1| LSU ribosomal protein L28P [Yersinia pestis Pestoides F] gi|149290294|gb|EDM40371.1| 50S ribosomal protein L28 [Yersinia pestis CA88-4125] gi|152959598|gb|ABS47059.1| ribosomal protein L28 [Yersinia pseudotuberculosis IP 31758] gi|162354702|gb|ABX88650.1| ribosomal protein L28 [Yersinia pestis Angola] gi|165915740|gb|EDR34348.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. IP275] gi|165922018|gb|EDR39195.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. F1991016] gi|165989580|gb|EDR41881.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205075|gb|EDR49555.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. B42003004] gi|166963025|gb|EDR59046.1| ribosomal protein L28 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048505|gb|EDR59913.1| ribosomal protein L28 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054369|gb|EDR64186.1| ribosomal protein L28 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752895|gb|ACA70413.1| ribosomal protein L28 [Yersinia pseudotuberculosis YPIII] gi|186696419|gb|ACC87048.1| ribosomal protein L28 [Yersinia pseudotuberculosis PB1/+] gi|229678608|gb|EEO74713.1| 50S ribosomal subunit protein L28 [Yersinia pestis Nepal516] gi|229690291|gb|EEO82345.1| 50S ribosomal subunit protein L28 [Yersinia pestis biovar Orientalis str. India 195] gi|229696265|gb|EEO86312.1| 50S ribosomal subunit protein L28 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706611|gb|EEO92617.1| 50S ribosomal subunit protein L28 [Yersinia pestis Pestoides A] gi|270336993|gb|EFA47770.1| ribosomal protein L28 [Yersinia pestis KIM D27] gi|320013404|gb|ADV96975.1| 50S ribosomal subunit protein L28 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 78 Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K MSGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMSGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L+ + Sbjct: 61 KKG-IETVLAEIRAR 74 >gi|170766820|ref|ZP_02901273.1| ribosomal protein L28 [Escherichia albertii TW07627] gi|170124258|gb|EDS93189.1| ribosomal protein L28 [Escherichia albertii TW07627] Length = 78 Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRVR 74 >gi|242237619|ref|YP_002985800.1| 50S ribosomal protein L28 [Dickeya dadantii Ech703] gi|251791517|ref|YP_003006238.1| 50S ribosomal protein L28 [Dickeya zeae Ech1591] gi|271498729|ref|YP_003331754.1| 50S ribosomal protein L28 [Dickeya dadantii Ech586] gi|307133080|ref|YP_003885096.1| 50S ribosomal subunit protein L28 [Dickeya dadantii 3937] gi|242129676|gb|ACS83978.1| ribosomal protein L28 [Dickeya dadantii Ech703] gi|247540138|gb|ACT08759.1| ribosomal protein L28 [Dickeya zeae Ech1591] gi|270342284|gb|ACZ75049.1| ribosomal protein L28 [Dickeya dadantii Ech586] gi|306530609|gb|ADN00540.1| 50S ribosomal subunit protein L28 [Dickeya dadantii 3937] Length = 78 Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IEAVLADLRAR 74 >gi|84386868|ref|ZP_00989892.1| ribosomal protein L28 [Vibrio splendidus 12B01] gi|86147285|ref|ZP_01065600.1| ribosomal protein L28 [Vibrio sp. MED222] gi|218708246|ref|YP_002415867.1| 50S ribosomal protein L28 [Vibrio splendidus LGP32] gi|260770728|ref|ZP_05879658.1| LSU ribosomal protein L28p [Vibrio furnissii CIP 102972] gi|254801387|sp|B7VHK3|RL28_VIBSL RecName: Full=50S ribosomal protein L28 gi|84378158|gb|EAP95017.1| ribosomal protein L28 [Vibrio splendidus 12B01] gi|85835000|gb|EAQ53143.1| ribosomal protein L28 [Vibrio sp. MED222] gi|218321265|emb|CAV17215.1| Ribosomal protein L28 [Vibrio splendidus LGP32] gi|260614309|gb|EEX39498.1| LSU ribosomal protein L28p [Vibrio furnissii CIP 102972] gi|315178476|gb|ADT85390.1| ribosomal protein L28 [Vibrio furnissii NCTC 11218] Length = 78 Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDAVLVDIRAR 74 >gi|119194203|ref|XP_001247705.1| hypothetical protein CIMG_01476 [Coccidioides immitis RS] Length = 224 Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S N KTRR + PN+ + L S+ +E+ L++ LR+++++GGLD Sbjct: 67 GATIQFGNKISKGRNEGKTRRIWKPNIRKEKLYSEALEKWLDLKVQHRVLRTIKKEGGLD 126 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L + S+ + L LR +++ + + Sbjct: 127 QYLLSDKPSRIKELGVFGWGLRWKVMTSKAMR 158 >gi|238918037|ref|YP_002931551.1| 50S ribosomal protein L28 [Edwardsiella ictaluri 93-146] gi|259646736|sp|C5B9D6|RL28_EDWI9 RecName: Full=50S ribosomal protein L28 gi|238867605|gb|ACR67316.1| ribosomal protein L28, putative [Edwardsiella ictaluri 93-146] Length = 78 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IEAVLADLRAR 74 >gi|82546000|ref|YP_409947.1| 50S ribosomal protein L28 [Shigella boydii Sb227] gi|123558301|sp|Q31UY9|RL28_SHIBS RecName: Full=50S ribosomal protein L28 gi|81247411|gb|ABB68119.1| 50S ribosomal subunit protein L28 [Shigella boydii Sb227] gi|332089447|gb|EGI94551.1| ribosomal protein L28 [Shigella boydii 3594-74] Length = 78 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|85710818|ref|ZP_01041879.1| Ribosomal protein L28 [Idiomarina baltica OS145] gi|85695222|gb|EAQ33159.1| Ribosomal protein L28 [Idiomarina baltica OS145] Length = 78 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN SHA N T+RRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSQVCQVTGKRPVVGNNRSHARNATKRRFLPNLQTHRFWVESEKRWVKLRISTKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 + G +D L++ + Sbjct: 61 KNG-IDSVLADLR 72 >gi|56459352|ref|YP_154633.1| ribosomal protein L28 [Idiomarina loihiensis L2TR] gi|67461323|sp|Q5QZB3|RL28_IDILO RecName: Full=50S ribosomal protein L28 gi|56178362|gb|AAV81084.1| Ribosomal protein L28 [Idiomarina loihiensis L2TR] Length = 78 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN SHA N TRRRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSQVCQVTGKRPVVGNNRSHARNATRRRFLPNLQSHRFWVESEKRWVKLRISTKGMRIID 60 Query: 61 RQGGLDRFLSNSK 73 + G +D L++ + Sbjct: 61 KNG-IDTVLADLR 72 >gi|291619456|ref|YP_003522198.1| RpmB [Pantoea ananatis LMG 20103] gi|304399016|ref|ZP_07380885.1| ribosomal protein L28 [Pantoea sp. aB] gi|291154486|gb|ADD79070.1| RpmB [Pantoea ananatis LMG 20103] gi|304353476|gb|EFM17854.1| ribosomal protein L28 [Pantoea sp. aB] gi|327395779|dbj|BAK13201.1| 50S ribosomal subunit protein L28 RpmB [Pantoea ananatis AJ13355] Length = 78 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVSVKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDTVLADMRAR 74 >gi|303311457|ref|XP_003065740.1| ribosomal L28 family protein [Coccidioides posadasii C735 delta SOWgp] gi|240105402|gb|EER23595.1| ribosomal L28 family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039613|gb|EFW21547.1| 50S ribosomal protein L24 [Coccidioides posadasii str. Silveira] Length = 224 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S N KTRR + PN+ + L S+ +E+ L++ LR+++++GGLD Sbjct: 67 GATIQFGNKISKGRNEGKTRRIWKPNIRKEKLYSEALEKWLDLKVQHRVLRTIKKEGGLD 126 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L + S+ + L LR +++ + + Sbjct: 127 QYLLSDKPSRIKELGIFGWGLRWKVMTSKAMR 158 >gi|325068208|ref|ZP_08126881.1| 50S ribosomal protein L28 [Actinomyces oris K20] gi|326774132|ref|ZP_08233414.1| ribosomal protein L28 [Actinomyces viscosus C505] gi|326636271|gb|EGE37175.1| ribosomal protein L28 [Actinomyces viscosus C505] Length = 79 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T + G VSH++ +T RR+ PNL R + + +L +S +R+++ Sbjct: 1 MTTYCQVTGARPVFGRSVSHSHKRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTID 60 Query: 61 RQGGLDRFLSN--SKKENLS 78 + G +D ++ ++ E LS Sbjct: 61 KLG-IDVVVAQMLARGEKLS 79 >gi|331239536|ref|XP_003332421.1| hypothetical protein PGTG_13806 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311411|gb|EFP88002.1| hypothetical protein PGTG_13806 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 255 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 53/87 (60%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V +G+ VS + ++T+R + PN+ R TL S+++ Q QL+++ AL+S++R GGLDR+ Sbjct: 81 GLKVRAGDNVSKSKHRTKRTWKPNVQRTTLWSEVLGQSLQLKVTSAALKSIDRMGGLDRY 140 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEK 95 + ++ L +R ++ M E+ Sbjct: 141 VLQMSEQRLGGMGIRIRELVIAAMQER 167 >gi|269103918|ref|ZP_06156615.1| LSU ribosomal protein L28p [Photobacterium damselae subsp. damselae CIP 102761] gi|268163816|gb|EEZ42312.1| LSU ribosomal protein L28p [Photobacterium damselae subsp. damselae CIP 102761] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDAVLVDMRAR 74 >gi|117621560|ref|YP_854694.1| 50S ribosomal protein L28 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|330831604|ref|YP_004394556.1| 50S ribosomal protein L28 [Aeromonas veronii B565] gi|166226535|sp|A0KEM9|RL28_AERHH RecName: Full=50S ribosomal protein L28 gi|117562967|gb|ABK39915.1| ribosomal protein L28 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|328806740|gb|AEB51939.1| 50S ribosomal protein L28 [Aeromonas veronii B565] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHANN T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHANNATKRRFLPNLHTHRFWVESEKRFVSLRVSAKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|52840724|ref|YP_094523.1| 50S ribosomal protein L28 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293471|ref|YP_125886.1| 50S ribosomal protein L28 [Legionella pneumophila str. Lens] gi|54296513|ref|YP_122882.1| 50S ribosomal protein L28 [Legionella pneumophila str. Paris] gi|148360905|ref|YP_001252112.1| 50S ribosomal protein L28 [Legionella pneumophila str. Corby] gi|67461335|sp|Q5WZ62|RL28_LEGPL RecName: Full=50S ribosomal protein L28 gi|67461340|sp|Q5X7R1|RL28_LEGPA RecName: Full=50S ribosomal protein L28 gi|67461348|sp|Q5ZY93|RL28_LEGPH RecName: Full=50S ribosomal protein L28 gi|166226585|sp|A5IHB6|RL28_LEGPC RecName: Full=50S ribosomal protein L28 gi|46430436|emb|CAE45004.1| putative 50s ribosomal protein L28 [Legionella pneumophila str. Corby] gi|52627835|gb|AAU26576.1| 50S ribosomal protein L28 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750298|emb|CAH11692.1| 50S ribosomal protein L28 [Legionella pneumophila str. Paris] gi|53753303|emb|CAH14750.1| 50S ribosomal protein L28 [Legionella pneumophila str. Lens] gi|148282678|gb|ABQ56766.1| 50S ribosomal protein L28 [Legionella pneumophila str. Corby] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M G+KVSHANNKT+RRFLPN+ + + LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMVGHKVSHANNKTKRRFLPNIQNHKFWVEEENRFVTLRLSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L + + Sbjct: 61 KLG-IKAVLDKIRAK 74 >gi|332995182|gb|AEF05237.1| ribosomal protein L28 [Alteromonas sp. SN2] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPTVGNNRSHARNATRRRFLPNLHSHRFWVESENRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L++ + Sbjct: 61 KNG-IDSVLTDIRAR 74 >gi|323143807|ref|ZP_08078474.1| ribosomal protein L28 [Succinatimonas hippei YIT 12066] gi|322416399|gb|EFY07066.1| ribosomal protein L28 [Succinatimonas hippei YIT 12066] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N +RRFLPNL + + +LR++ A+R+++ Sbjct: 1 MSRVCQVTGKRPAVGNHRSHAKNAAKRRFLPNLKYHRFWVESEGRFVRLRVTTKAMRTID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLADMRAN 74 >gi|256823437|ref|YP_003147400.1| 50S ribosomal protein L28 [Kangiella koreensis DSM 16069] gi|256796976|gb|ACV27632.1| ribosomal protein L28 [Kangiella koreensis DSM 16069] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K ++GN VSHA N+T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MAKVCQVTGKRPVTGNNVSHAKNRTKRRFLPNLHSHRFWVESEKRFVRLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLTELRAR 74 >gi|85060186|ref|YP_455888.1| 50S ribosomal protein L28 [Sodalis glossinidius str. 'morsitans'] gi|123518742|sp|Q2NQU2|RL28_SODGM RecName: Full=50S ribosomal protein L28 gi|84780706|dbj|BAE75483.1| 50S ribosomal protein L28 [Sodalis glossinidius str. 'morsitans'] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|293333379|ref|NP_001168906.1| hypothetical protein LOC100382712 [Zea mays] gi|223973641|gb|ACN31008.1| unknown [Zea mays] Length = 207 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GNKVS NK+RR + PN+ L S + +Q +++++ ALR ++ Sbjct: 44 AKRGIFAGRHIRFGNKVSEDGGNKSRRSWKPNVQEKRLFSYVHDQHIRVKVTTHALRCID 103 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 + GG+D +L + + M + ++KM Sbjct: 104 KAGGIDEYLLKTPYNKMDTEMGIVWKANIEKMYS 137 >gi|118602956|ref|YP_904171.1| 50S ribosomal protein L28 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166226615|sp|A1AXP3|RL28_RUTMC RecName: Full=50S ribosomal protein L28 gi|118567895|gb|ABL02700.1| LSU ribosomal protein L28P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC +T K +SGN VSHANN+TRRRF PNL + + +L++S LR ++ Sbjct: 1 MAKVCVVTGKRPISGNNVSHANNRTRRRFYPNLHTHRFWVENENRFVKLKLSAKGLRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAKIRIR 74 >gi|91791694|ref|YP_561345.1| ribosomal protein L28 [Shewanella denitrificans OS217] gi|91713696|gb|ABE53622.1| LSU ribosomal protein L28P [Shewanella denitrificans OS217] Length = 106 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN SHA N TRRRFLPNL + ++ QLR+S +R ++ Sbjct: 29 MSRICQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRIID 88 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + L AR + Sbjct: 89 KKG------IEVVVKELRARGEKV 106 >gi|328675491|gb|AEB28166.1| LSU ribosomal protein L28p [Francisella cf. novicida 3523] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +GN VSHA NKTRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKVCIVTGKRPATGNNVSHAQNKTRRRFLPNLHTHRFWVESENRYIKLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ + + Sbjct: 61 KKG-IDTVLSDLRAQ 74 >gi|308047855|ref|YP_003911421.1| 50S ribosomal protein L28P [Ferrimonas balearica DSM 9799] gi|307630045|gb|ADN74347.1| LSU ribosomal protein L28P [Ferrimonas balearica DSM 9799] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN SHANN T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSKVCQVTGKRPVTGNNRSHANNATKRRFLPNLQTHRFWVEGEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + L AR + Sbjct: 61 KKG------IEAVLTELRARGEKI 78 >gi|329945915|ref|ZP_08293602.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528363|gb|EGF55341.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386] Length = 82 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T + G VSH++ +T RR+ PNL R + + +L +S +R+++ Sbjct: 4 MTTYCQVTGTRPVFGRSVSHSHKRTPRRWNPNLQRKRYWVPSLGRTVRLTVSAKGIRTID 63 Query: 61 RQGGLDRFLSN--SKKENLS 78 + G +D ++ ++ E LS Sbjct: 64 KLG-IDVVVAQMLARGEKLS 82 >gi|212542117|ref|XP_002151213.1| 50S ribosomal protein L24 [Penicillium marneffei ATCC 18224] gi|210066120|gb|EEA20213.1| 50S ribosomal protein L24 [Penicillium marneffei ATCC 18224] Length = 237 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 ++ GNK+S NK TRR + PN+ + S+ + + +++++ ALR++ + GGLD Sbjct: 70 GVSISFGNKISKGRNKGKTRRSWKPNVRWKKMPSEALGEDVFVKLTRKALRTIRKCGGLD 129 Query: 67 RFLSNSKK---ENLSARMRTLRSQILKKMSEK 95 +L + K + L LR +I++ + K Sbjct: 130 NYLLSDKPSRLKELGLAGWKLRYRIMQSPAMK 161 >gi|88797505|ref|ZP_01113094.1| 50S ribosomal protein L28 [Reinekea sp. MED297] gi|88779677|gb|EAR10863.1| 50S ribosomal protein L28 [Reinekea sp. MED297] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSH+ KT+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHSQIKTKRRFLPNLHSHRFWVESEKRFVKLRVSTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|331005612|ref|ZP_08328982.1| LSU ribosomal protein L28p [gamma proteobacterium IMCC1989] gi|330420585|gb|EGG94881.1| LSU ribosomal protein L28p [gamma proteobacterium IMCC1989] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNVSHAKNHTKRRFLPNLHSHRFWVESEKRFVKLRVSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G S E+L +R + Sbjct: 61 KKG------IESVLEDLRSRGEKV 78 >gi|146309769|ref|YP_001174843.1| 50S ribosomal protein L28 [Enterobacter sp. 638] gi|206578199|ref|YP_002236001.1| ribosomal protein L28 [Klebsiella pneumoniae 342] gi|288933008|ref|YP_003437067.1| ribosomal protein L28 [Klebsiella variicola At-22] gi|290511801|ref|ZP_06551169.1| 50S ribosomal protein L28 [Klebsiella sp. 1_1_55] gi|311277442|ref|YP_003939673.1| ribosomal protein L28 [Enterobacter cloacae SCF1] gi|166987912|sp|A4W512|RL28_ENT38 RecName: Full=50S ribosomal protein L28 gi|226694950|sp|B5XTG6|RL28_KLEP3 RecName: Full=50S ribosomal protein L28 gi|145316645|gb|ABP58792.1| LSU ribosomal protein L28P [Enterobacter sp. 638] gi|206567257|gb|ACI09033.1| ribosomal protein L28 [Klebsiella pneumoniae 342] gi|288887737|gb|ADC56055.1| ribosomal protein L28 [Klebsiella variicola At-22] gi|289775591|gb|EFD83591.1| 50S ribosomal protein L28 [Klebsiella sp. 1_1_55] gi|308746637|gb|ADO46389.1| ribosomal protein L28 [Enterobacter cloacae SCF1] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS + Sbjct: 61 KKG-IDTVLSELRAR 74 >gi|269796915|ref|YP_003316370.1| 50S ribosomal protein L28P [Sanguibacter keddieii DSM 10542] gi|269099100|gb|ACZ23536.1| LSU ribosomal protein L28P [Sanguibacter keddieii DSM 10542] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS VC++ G+ +SH++ +T+RRF PN+ + + + LR+S L++++ Sbjct: 1 MSAVCQVLGTQPGFGHTISHSHVRTKRRFNPNIQKKRFWVPSLGRHVTLRVSARGLKTID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|15640248|ref|NP_229875.1| 50S ribosomal protein L28 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121729458|ref|ZP_01682087.1| ribosomal protein L28 [Vibrio cholerae V52] gi|147673253|ref|YP_001218478.1| 50S ribosomal protein L28 [Vibrio cholerae O395] gi|153214734|ref|ZP_01949579.1| ribosomal protein L28 [Vibrio cholerae 1587] gi|153800811|ref|ZP_01955397.1| ribosomal protein L28 [Vibrio cholerae MZO-3] gi|153820024|ref|ZP_01972691.1| ribosomal protein L28 [Vibrio cholerae NCTC 8457] gi|153826353|ref|ZP_01979020.1| ribosomal protein L28 [Vibrio cholerae MZO-2] gi|227080438|ref|YP_002808989.1| ribosomal protein L28 [Vibrio cholerae M66-2] gi|229506981|ref|ZP_04396489.1| LSU ribosomal protein L28p [Vibrio cholerae BX 330286] gi|229509351|ref|ZP_04398834.1| LSU ribosomal protein L28p [Vibrio cholerae B33] gi|229512789|ref|ZP_04402257.1| LSU ribosomal protein L28p [Vibrio cholerae TMA 21] gi|229516298|ref|ZP_04405746.1| LSU ribosomal protein L28p [Vibrio cholerae RC9] gi|229524830|ref|ZP_04414235.1| LSU ribosomal protein L28p [Vibrio cholerae bv. albensis VL426] gi|229527279|ref|ZP_04416672.1| LSU ribosomal protein L28p [Vibrio cholerae 12129(1)] gi|229606489|ref|YP_002877137.1| 50S ribosomal protein L28 [Vibrio cholerae MJ-1236] gi|254225708|ref|ZP_04919315.1| ribosomal protein L28 [Vibrio cholerae V51] gi|254851348|ref|ZP_05240698.1| 50S ribosomal protein L28 [Vibrio cholerae MO10] gi|255744030|ref|ZP_05417984.1| LSU ribosomal protein L28p [Vibrio cholera CIRS 101] gi|258620578|ref|ZP_05715615.1| ribosomal protein L28 [Vibrio mimicus VM573] gi|258625888|ref|ZP_05720763.1| ribosomal protein L28 [Vibrio mimicus VM603] gi|261210489|ref|ZP_05924783.1| LSU ribosomal protein L28p [Vibrio sp. RC341] gi|262161921|ref|ZP_06030938.1| LSU ribosomal protein L28p [Vibrio cholerae INDRE 91/1] gi|262163758|ref|ZP_06031498.1| LSU ribosomal protein L28p [Vibrio mimicus VM223] gi|262168069|ref|ZP_06035768.1| LSU ribosomal protein L28p [Vibrio cholerae RC27] gi|262172689|ref|ZP_06040367.1| LSU ribosomal protein L28p [Vibrio mimicus MB-451] gi|262404955|ref|ZP_06081507.1| LSU ribosomal protein L28p [Vibrio sp. RC586] gi|297581671|ref|ZP_06943593.1| ribosomal protein L28 [Vibrio cholerae RC385] gi|298500860|ref|ZP_07010662.1| ribosomal protein L28 [Vibrio cholerae MAK 757] gi|14195136|sp|Q9KVC8|RL28_VIBCH RecName: Full=50S ribosomal protein L28 gi|172047482|sp|A5F404|RL28_VIBC3 RecName: Full=50S ribosomal protein L28 gi|254801386|sp|C3LQI0|RL28_VIBCM RecName: Full=50S ribosomal protein L28 gi|9654626|gb|AAF93394.1| ribosomal protein L28 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628633|gb|EAX61108.1| ribosomal protein L28 [Vibrio cholerae V52] gi|124115170|gb|EAY33990.1| ribosomal protein L28 [Vibrio cholerae 1587] gi|124123642|gb|EAY42385.1| ribosomal protein L28 [Vibrio cholerae MZO-3] gi|125621828|gb|EAZ50155.1| ribosomal protein L28 [Vibrio cholerae V51] gi|126509428|gb|EAZ72022.1| ribosomal protein L28 [Vibrio cholerae NCTC 8457] gi|146315136|gb|ABQ19675.1| ribosomal protein L28 [Vibrio cholerae O395] gi|149739922|gb|EDM54109.1| ribosomal protein L28 [Vibrio cholerae MZO-2] gi|227008326|gb|ACP04538.1| ribosomal protein L28 [Vibrio cholerae M66-2] gi|227012065|gb|ACP08275.1| ribosomal protein L28 [Vibrio cholerae O395] gi|229335287|gb|EEO00771.1| LSU ribosomal protein L28p [Vibrio cholerae 12129(1)] gi|229338411|gb|EEO03428.1| LSU ribosomal protein L28p [Vibrio cholerae bv. albensis VL426] gi|229346724|gb|EEO11694.1| LSU ribosomal protein L28p [Vibrio cholerae RC9] gi|229350299|gb|EEO15251.1| LSU ribosomal protein L28p [Vibrio cholerae TMA 21] gi|229353666|gb|EEO18603.1| LSU ribosomal protein L28p [Vibrio cholerae B33] gi|229356086|gb|EEO21005.1| LSU ribosomal protein L28p [Vibrio cholerae BX 330286] gi|229369144|gb|ACQ59567.1| LSU ribosomal protein L28p [Vibrio cholerae MJ-1236] gi|254847053|gb|EET25467.1| 50S ribosomal protein L28 [Vibrio cholerae MO10] gi|255738295|gb|EET93686.1| LSU ribosomal protein L28p [Vibrio cholera CIRS 101] gi|258581852|gb|EEW06726.1| ribosomal protein L28 [Vibrio mimicus VM603] gi|258587093|gb|EEW11805.1| ribosomal protein L28 [Vibrio mimicus VM573] gi|260840547|gb|EEX67113.1| LSU ribosomal protein L28p [Vibrio sp. RC341] gi|261893765|gb|EEY39751.1| LSU ribosomal protein L28p [Vibrio mimicus MB-451] gi|262023602|gb|EEY42304.1| LSU ribosomal protein L28p [Vibrio cholerae RC27] gi|262027738|gb|EEY46403.1| LSU ribosomal protein L28p [Vibrio mimicus VM223] gi|262028299|gb|EEY46955.1| LSU ribosomal protein L28p [Vibrio cholerae INDRE 91/1] gi|262348794|gb|EEY97935.1| LSU ribosomal protein L28p [Vibrio sp. RC586] gi|297534078|gb|EFH72917.1| ribosomal protein L28 [Vibrio cholerae RC385] gi|297540364|gb|EFH76423.1| ribosomal protein L28 [Vibrio cholerae MAK 757] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + Sbjct: 61 KKG-IDAVLVEIRAR 74 >gi|192361901|ref|YP_001983968.1| 50S ribosomal protein L28 [Cellvibrio japonicus Ueda107] gi|226738047|sp|B3PG61|RL28_CELJU RecName: Full=50S ribosomal protein L28 gi|190688066|gb|ACE85744.1| ribosomal protein L28-related protein [Cellvibrio japonicus Ueda107] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++G+ VSHA N T+RRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSKVCQVTGKRPITGHNVSHAKNHTKRRFLPNLQTHRFWVEAEKRFVTLRLTPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 61 KLG-IEAVLADIRAR 74 >gi|311743542|ref|ZP_07717348.1| 50S ribosomal protein L28 [Aeromicrobium marinum DSM 15272] gi|311312672|gb|EFQ82583.1| 50S ribosomal protein L28 [Aeromicrobium marinum DSM 15272] Length = 90 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC +T G+ VSH++ +T+RRF N+ R + + + L +S +++V+ Sbjct: 13 MSRVCPVTGAQPGFGHHVSHSHRRTKRRFDVNIQRKRYWAPTLGRHVTLTLSARGIKTVD 72 Query: 61 RQGGLDRFLSN 71 ++G +D +++ Sbjct: 73 QRG-IDAVVAD 82 >gi|262374142|ref|ZP_06067419.1| ribosomal protein L28 [Acinetobacter junii SH205] gi|262311153|gb|EEY92240.1| ribosomal protein L28 [Acinetobacter junii SH205] Length = 78 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN VSHANNKT+RRF PNL + ++ +LR++ +R ++ Sbjct: 1 MSKVCQVTGKRPIVGNNVSHANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|24375731|ref|NP_719774.1| ribosomal protein L28 [Shewanella oneidensis MR-1] gi|113971924|ref|YP_735717.1| 50S ribosomal protein L28 [Shewanella sp. MR-4] gi|114045870|ref|YP_736420.1| 50S ribosomal protein L28 [Shewanella sp. MR-7] gi|117922201|ref|YP_871393.1| 50S ribosomal protein L28 [Shewanella sp. ANA-3] gi|120597170|ref|YP_961744.1| 50S ribosomal protein L28 [Shewanella sp. W3-18-1] gi|126172630|ref|YP_001048779.1| 50S ribosomal protein L28 [Shewanella baltica OS155] gi|146291570|ref|YP_001181994.1| 50S ribosomal protein L28 [Shewanella putrefaciens CN-32] gi|152998928|ref|YP_001364609.1| 50S ribosomal protein L28 [Shewanella baltica OS185] gi|160873514|ref|YP_001552830.1| 50S ribosomal protein L28 [Shewanella baltica OS195] gi|217971609|ref|YP_002356360.1| 50S ribosomal protein L28 [Shewanella baltica OS223] gi|304411667|ref|ZP_07393279.1| ribosomal protein L28 [Shewanella baltica OS183] gi|307306281|ref|ZP_07586026.1| ribosomal protein L28 [Shewanella baltica BA175] gi|67461528|sp|Q8E9M3|RL28_SHEON RecName: Full=50S ribosomal protein L28 gi|122945022|sp|Q0HZU2|RL28_SHESR RecName: Full=50S ribosomal protein L28 gi|123130027|sp|Q0HE57|RL28_SHESM RecName: Full=50S ribosomal protein L28 gi|166226617|sp|A3CZJ7|RL28_SHEB5 RecName: Full=50S ribosomal protein L28 gi|166226618|sp|A6WIA7|RL28_SHEB8 RecName: Full=50S ribosomal protein L28 gi|166226620|sp|A4Y2L2|RL28_SHEPC RecName: Full=50S ribosomal protein L28 gi|166226621|sp|A0L1R8|RL28_SHESA RecName: Full=50S ribosomal protein L28 gi|166226622|sp|A1REU5|RL28_SHESW RecName: Full=50S ribosomal protein L28 gi|189029453|sp|A9KY05|RL28_SHEB9 RecName: Full=50S ribosomal protein L28 gi|254801375|sp|B8E4J6|RL28_SHEB2 RecName: Full=50S ribosomal protein L28 gi|24350668|gb|AAN57218.1|AE015857_11 ribosomal protein L28 [Shewanella oneidensis MR-1] gi|113886608|gb|ABI40660.1| LSU ribosomal protein L28P [Shewanella sp. MR-4] gi|113887312|gb|ABI41363.1| LSU ribosomal protein L28P [Shewanella sp. MR-7] gi|117614533|gb|ABK49987.1| LSU ribosomal protein L28P [Shewanella sp. ANA-3] gi|120557263|gb|ABM23190.1| LSU ribosomal protein L28P [Shewanella sp. W3-18-1] gi|125995835|gb|ABN59910.1| LSU ribosomal protein L28P [Shewanella baltica OS155] gi|145563260|gb|ABP74195.1| LSU ribosomal protein L28P [Shewanella putrefaciens CN-32] gi|151363546|gb|ABS06546.1| ribosomal protein L28 [Shewanella baltica OS185] gi|160859036|gb|ABX47570.1| ribosomal protein L28 [Shewanella baltica OS195] gi|217496744|gb|ACK44937.1| ribosomal protein L28 [Shewanella baltica OS223] gi|304349855|gb|EFM14261.1| ribosomal protein L28 [Shewanella baltica OS183] gi|306911154|gb|EFN41581.1| ribosomal protein L28 [Shewanella baltica BA175] gi|315265743|gb|ADT92596.1| ribosomal protein L28 [Shewanella baltica OS678] gi|319424743|gb|ADV52817.1| ribosomal protein L28 [Shewanella putrefaciens 200] Length = 78 Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLR+S +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNATRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRLID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|90023319|ref|YP_529146.1| 50S ribosomal protein L28 [Saccharophagus degradans 2-40] gi|123276030|sp|Q21EE5|RL28_SACD2 RecName: Full=50S ribosomal protein L28 gi|89952919|gb|ABD82934.1| LSU ribosomal protein L28P [Saccharophagus degradans 2-40] Length = 78 Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K ++G+ VSHA N T+RRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MAKVCQVTGKRPVTGHNVSHAKNHTKRRFLPNLHSHRFWVESEKRFVKLRISTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|115372990|ref|ZP_01460294.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|310818660|ref|YP_003951018.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|115370068|gb|EAU68999.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|309391732|gb|ADO69191.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN VSH+NNKT+RR LPNL + + +LR+S +R + Sbjct: 1 MSKVCQVTGKRPLVGNNVSHSNNKTKRRSLPNLQWKRFWVEKENRFVRLRVSAHGIRIIN 60 Query: 61 RQG 63 +QG Sbjct: 61 KQG 63 >gi|123440464|ref|YP_001004458.1| 50S ribosomal protein L28 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159687|ref|YP_004296264.1| 50S ribosomal protein L28 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166228173|sp|A1JHR2|RL28_YERE8 RecName: Full=50S ribosomal protein L28 gi|122087425|emb|CAL10206.1| 50S ribosomal protein L28 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318603786|emb|CBY25284.1| LSU ribosomal protein L28p [Yersinia enterocolitica subsp. palearctica Y11] gi|325663917|gb|ADZ40561.1| 50S ribosomal protein L28 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859990|emb|CBX70318.1| 50S ribosomal protein L28 [Yersinia enterocolitica W22703] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L+ + Sbjct: 61 KKG-IETVLAEIRAR 74 >gi|50083741|ref|YP_045251.1| 50S ribosomal protein L28 [Acinetobacter sp. ADP1] gi|126640521|ref|YP_001083505.1| 50S ribosomal protein L28 [Acinetobacter baumannii ATCC 17978] gi|169634455|ref|YP_001708191.1| 50S ribosomal protein L28 [Acinetobacter baumannii SDF] gi|169797300|ref|YP_001715093.1| 50S ribosomal protein L28 [Acinetobacter baumannii AYE] gi|184156778|ref|YP_001845117.1| 50S ribosomal protein L28 [Acinetobacter baumannii ACICU] gi|213155890|ref|YP_002317935.1| ribosomal protein L28 [Acinetobacter baumannii AB0057] gi|215484737|ref|YP_002326972.1| ribosomal protein L28 [Acinetobacter baumannii AB307-0294] gi|239500819|ref|ZP_04660129.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB900] gi|255321191|ref|ZP_05362357.1| ribosomal protein L28 [Acinetobacter radioresistens SK82] gi|260549128|ref|ZP_05823349.1| ribosomal protein L28 [Acinetobacter sp. RUH2624] gi|260556188|ref|ZP_05828407.1| ribosomal protein L28 [Acinetobacter baumannii ATCC 19606] gi|262280873|ref|ZP_06058656.1| ribosomal protein L28 [Acinetobacter calcoaceticus RUH2202] gi|262369955|ref|ZP_06063282.1| ribosomal protein L28 [Acinetobacter johnsonii SH046] gi|262375013|ref|ZP_06068247.1| ribosomal protein L28 [Acinetobacter lwoffii SH145] gi|262380123|ref|ZP_06073278.1| ribosomal protein L28 [Acinetobacter radioresistens SH164] gi|293610244|ref|ZP_06692545.1| 50S ribosomal protein L28 [Acinetobacter sp. SH024] gi|299771669|ref|YP_003733695.1| 50S ribosomal protein L28 [Acinetobacter sp. DR1] gi|301346579|ref|ZP_07227320.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB056] gi|301511046|ref|ZP_07236283.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB058] gi|301596908|ref|ZP_07241916.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB059] gi|332853001|ref|ZP_08434511.1| ribosomal protein L28 [Acinetobacter baumannii 6013150] gi|332866451|ref|ZP_08437020.1| ribosomal protein L28 [Acinetobacter baumannii 6013113] gi|332873190|ref|ZP_08441147.1| ribosomal protein L28 [Acinetobacter baumannii 6014059] gi|67461401|sp|Q6FES9|RL28_ACIAD RecName: Full=50S ribosomal protein L28 gi|166226530|sp|A3M1V9|RL28_ACIBT RecName: Full=50S ribosomal protein L28 gi|226738013|sp|B7H0Q4|RL28_ACIB3 RecName: Full=50S ribosomal protein L28 gi|226738014|sp|B7I4T0|RL28_ACIB5 RecName: Full=50S ribosomal protein L28 gi|226738015|sp|B2I392|RL28_ACIBC RecName: Full=50S ribosomal protein L28 gi|226738016|sp|B0VL79|RL28_ACIBS RecName: Full=50S ribosomal protein L28 gi|226738017|sp|B0V4N1|RL28_ACIBY RecName: Full=50S ribosomal protein L28 gi|49529717|emb|CAG67429.1| 50S ribosomal protein L28 [Acinetobacter sp. ADP1] gi|126386405|gb|ABO10903.1| 50S ribosomal protein L28 [Acinetobacter baumannii ATCC 17978] gi|169150227|emb|CAM88123.1| 50S ribosomal protein L28 [Acinetobacter baumannii AYE] gi|169153247|emb|CAP02347.1| 50S ribosomal protein L28 [Acinetobacter baumannii] gi|183208372|gb|ACC55770.1| putative ribosomal protein L28 [Acinetobacter baumannii ACICU] gi|213055050|gb|ACJ39952.1| ribosomal protein L28 [Acinetobacter baumannii AB0057] gi|213986890|gb|ACJ57189.1| ribosomal protein L28 [Acinetobacter baumannii AB307-0294] gi|255301745|gb|EET80996.1| ribosomal protein L28 [Acinetobacter radioresistens SK82] gi|260407856|gb|EEX01328.1| ribosomal protein L28 [Acinetobacter sp. RUH2624] gi|260410243|gb|EEX03542.1| ribosomal protein L28 [Acinetobacter baumannii ATCC 19606] gi|262257773|gb|EEY76508.1| ribosomal protein L28 [Acinetobacter calcoaceticus RUH2202] gi|262298317|gb|EEY86231.1| ribosomal protein L28 [Acinetobacter radioresistens SH164] gi|262310026|gb|EEY91155.1| ribosomal protein L28 [Acinetobacter lwoffii SH145] gi|262314994|gb|EEY96034.1| ribosomal protein L28 [Acinetobacter johnsonii SH046] gi|292827476|gb|EFF85840.1| 50S ribosomal protein L28 [Acinetobacter sp. SH024] gi|298701757|gb|ADI92322.1| 50S ribosomal protein L28 [Acinetobacter sp. DR1] gi|322506670|gb|ADX02124.1| rpmB [Acinetobacter baumannii 1656-2] gi|323516545|gb|ADX90926.1| 50S ribosomal protein L28 [Acinetobacter baumannii TCDC-AB0715] gi|325124423|gb|ADY83946.1| 50S ribosomal protein L28 [Acinetobacter calcoaceticus PHEA-2] gi|332728937|gb|EGJ60292.1| ribosomal protein L28 [Acinetobacter baumannii 6013150] gi|332734608|gb|EGJ65715.1| ribosomal protein L28 [Acinetobacter baumannii 6013113] gi|332738702|gb|EGJ69572.1| ribosomal protein L28 [Acinetobacter baumannii 6014059] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN VSHANNKT+RRF PNL + ++ +LR++ +R ++ Sbjct: 1 MSKVCQVTGKRPVVGNNVSHANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|154287660|ref|XP_001544625.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408266|gb|EDN03807.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 191 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + + QL++ LR++++ GGLD Sbjct: 63 GSTIQFGNKISKGRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKKVGGLD 122 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 ++L ++ + L LR ++++ + + Sbjct: 123 QYLLGDKPARIKELGIFGWNLRWKVMQSKAMQ 154 >gi|56708623|ref|YP_170519.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis SCHU S4] gi|89255929|ref|YP_513291.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica LVS] gi|110671094|ref|YP_667651.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis FSC198] gi|115314411|ref|YP_763134.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica OSU18] gi|118496943|ref|YP_897993.1| 50S ribosomal protein L28 [Francisella tularensis subsp. novicida U112] gi|134301431|ref|YP_001121399.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501918|ref|YP_001427983.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009168|ref|ZP_02274099.1| ribosomal protein L28 [Francisella tularensis subsp. holarctica FSC200] gi|187931156|ref|YP_001891140.1| 50S ribosomal protein L28 [Francisella tularensis subsp. mediasiatica FSC147] gi|194324171|ref|ZP_03057945.1| ribosomal protein L28 [Francisella tularensis subsp. novicida FTE] gi|208780396|ref|ZP_03247737.1| ribosomal protein L28 [Francisella novicida FTG] gi|224457816|ref|ZP_03666289.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis MA00-2987] gi|254367287|ref|ZP_04983314.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica 257] gi|254368763|ref|ZP_04984776.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica FSC022] gi|254371256|ref|ZP_04987258.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis FSC033] gi|254372313|ref|ZP_04987804.1| 50S ribosomal protein L28 [Francisella tularensis subsp. novicida GA99-3549] gi|254373787|ref|ZP_04989270.1| ribosomal protein L28 [Francisella novicida GA99-3548] gi|254875487|ref|ZP_05248197.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis MA00-2987] gi|290953710|ref|ZP_06558331.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica URFT1] gi|295312945|ref|ZP_06803664.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica URFT1] gi|67461296|sp|Q5NEM3|RL28_FRATT RecName: Full=50S ribosomal protein L28 gi|122325562|sp|Q0BN37|RL28_FRATO RecName: Full=50S ribosomal protein L28 gi|122501078|sp|Q2A4R1|RL28_FRATH RecName: Full=50S ribosomal protein L28 gi|123063365|sp|Q14G26|RL28_FRAT1 RecName: Full=50S ribosomal protein L28 gi|166226572|sp|A7NAM4|RL28_FRATF RecName: Full=50S ribosomal protein L28 gi|166226573|sp|A0Q4S4|RL28_FRATN RecName: Full=50S ribosomal protein L28 gi|166226574|sp|A4IWH7|RL28_FRATW RecName: Full=50S ribosomal protein L28 gi|226694923|sp|B2SFK9|RL28_FRATM RecName: Full=50S ribosomal protein L28 gi|56605115|emb|CAG46236.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis SCHU S4] gi|89143760|emb|CAJ78962.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica LVS] gi|110321427|emb|CAL09619.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis FSC198] gi|115129310|gb|ABI82497.1| ribosomal protein L28 [Francisella tularensis subsp. holarctica OSU18] gi|118422849|gb|ABK89239.1| 50S ribosomal protein L28 [Francisella novicida U112] gi|134049208|gb|ABO46279.1| ribosomal protein L28 [Francisella tularensis subsp. tularensis WY96-3418] gi|134253104|gb|EBA52198.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica 257] gi|151569496|gb|EDN35150.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis FSC033] gi|151570042|gb|EDN35696.1| 50S ribosomal protein L28 [Francisella novicida GA99-3549] gi|151571508|gb|EDN37162.1| ribosomal protein L28 [Francisella novicida GA99-3548] gi|156252521|gb|ABU61027.1| ribosomal protein L28 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121684|gb|EDO65854.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica FSC022] gi|187712065|gb|ACD30362.1| 50S ribosomal protein L28 [Francisella tularensis subsp. mediasiatica FSC147] gi|194321618|gb|EDX19102.1| ribosomal protein L28 [Francisella tularensis subsp. novicida FTE] gi|208743764|gb|EDZ90067.1| ribosomal protein L28 [Francisella novicida FTG] gi|254841486|gb|EET19922.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis MA00-2987] gi|282159860|gb|ADA79251.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis NE061598] gi|328676415|gb|AEB27285.1| LSU ribosomal protein L28p [Francisella cf. novicida Fx1] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +GN VSHA NKT+RRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKVCIVTGKRPATGNNVSHAQNKTKRRFLPNLHAHRFWVESENRYIKLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ + + Sbjct: 61 KKG-IDTVLSDLRAQ 74 >gi|168025860|ref|XP_001765451.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683301|gb|EDQ69712.1| predicted protein [Physcomitrella patens subsp. patens] Length = 108 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NK+RR + PN+ + S +++ ++ I+ ALR ++ Sbjct: 8 AKRGLYAGRHIQFGNQVSEDGGNKSRRTWKPNVQTKRIFSLGLDRYIKMNITMHALRCID 67 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GGLD +L + + L + + + K Sbjct: 68 KAGGLDEYLLTTPEHKLDNDLAREWRTRIAAVYNK 102 >gi|317494720|ref|ZP_07953132.1| ribosomal L28 family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917322|gb|EFV38669.1| ribosomal L28 family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVAGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L+ + Sbjct: 61 KKG-IETVLAEIRAR 74 >gi|157373073|ref|YP_001481062.1| 50S ribosomal protein L28 [Serratia proteamaculans 568] gi|270265227|ref|ZP_06193489.1| 50S ribosomal protein L28 [Serratia odorifera 4Rx13] gi|166987916|sp|A8GLE4|RL28_SERP5 RecName: Full=50S ribosomal protein L28 gi|157324837|gb|ABV43934.1| ribosomal protein L28 [Serratia proteamaculans 568] gi|270040861|gb|EFA13963.1| 50S ribosomal protein L28 [Serratia odorifera 4Rx13] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHAMNATKRRFLPNLHSHRFWVEAEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L R Sbjct: 61 KKG------IETVLADLRTRGEK 77 >gi|320539886|ref|ZP_08039545.1| 50S ribosomal subunit protein L28 [Serratia symbiotica str. Tucson] gi|322835041|ref|YP_004215068.1| ribosomal protein L28 [Rahnella sp. Y9602] gi|320030072|gb|EFW12092.1| 50S ribosomal subunit protein L28 [Serratia symbiotica str. Tucson] gi|321170242|gb|ADW75941.1| ribosomal protein L28 [Rahnella sp. Y9602] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHAMNATKRRFLPNLHSHRFWVEAEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L AR Sbjct: 61 KKG------IETVLADLRARGEK 77 >gi|270159135|ref|ZP_06187791.1| ribosomal protein L28 [Legionella longbeachae D-4968] gi|289166031|ref|YP_003456169.1| 50S ribosomal protein L28 [Legionella longbeachae NSW150] gi|269987474|gb|EEZ93729.1| ribosomal protein L28 [Legionella longbeachae D-4968] gi|288859204|emb|CBJ13136.1| 50S ribosomal protein L28 [Legionella longbeachae NSW150] Length = 78 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M+G+KVSHANNKT+RRFLPN+ + + ++ L++S +R ++ Sbjct: 1 MSRVCQVTGKRPMTGHKVSHANNKTKRRFLPNIQNHSFWVEEEKRFVTLKLSTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 + G + + L A+ + Sbjct: 61 KLG------IKAVLDKLRAKGEKI 78 >gi|28896959|ref|NP_796564.1| 50S ribosomal protein L28 [Vibrio parahaemolyticus RIMD 2210633] gi|153842080|ref|ZP_01993469.1| ribosomal protein L28 [Vibrio parahaemolyticus AQ3810] gi|163803270|ref|ZP_02197149.1| hypothetical protein 1103602000575_AND4_17901 [Vibrio sp. AND4] gi|260362384|ref|ZP_05775342.1| ribosomal protein L28 [Vibrio parahaemolyticus K5030] gi|260877859|ref|ZP_05890214.1| ribosomal protein L28 [Vibrio parahaemolyticus AN-5034] gi|260897662|ref|ZP_05906158.1| ribosomal protein L28 [Vibrio parahaemolyticus Peru-466] gi|260899592|ref|ZP_05907987.1| ribosomal protein L28 [Vibrio parahaemolyticus AQ4037] gi|31340345|sp|Q87T85|RL28_VIBPA RecName: Full=50S ribosomal protein L28 gi|28805167|dbj|BAC58448.1| ribosomal protein L28 [Vibrio parahaemolyticus RIMD 2210633] gi|149745415|gb|EDM56666.1| ribosomal protein L28 [Vibrio parahaemolyticus AQ3810] gi|159172907|gb|EDP57745.1| hypothetical protein AND4_17901 [Vibrio sp. AND4] gi|308087500|gb|EFO37195.1| ribosomal protein L28 [Vibrio parahaemolyticus Peru-466] gi|308089836|gb|EFO39531.1| ribosomal protein L28 [Vibrio parahaemolyticus AN-5034] gi|308108807|gb|EFO46347.1| ribosomal protein L28 [Vibrio parahaemolyticus AQ4037] gi|308115155|gb|EFO52695.1| ribosomal protein L28 [Vibrio parahaemolyticus K5030] gi|328471755|gb|EGF42632.1| 50S ribosomal protein L28 [Vibrio parahaemolyticus 10329] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDTVLADIRAR 74 >gi|296417908|ref|XP_002838589.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634539|emb|CAZ82780.1| unnamed protein product [Tuber melanosporum] Length = 249 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 9 KKTVMSGNKVSHA--NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 K + GN V KTRR+++PN+ ++ S + + L I+ LR++++ GGLD Sbjct: 62 GKHIQFGNNVPENFLRYKTRRQWMPNVRHRSVYSRALGMHFSLDITTSVLRTIDKVGGLD 121 Query: 67 RFLSNSKK---ENLSARMRTLRSQIL 89 +L+ +K + L LR ++L Sbjct: 122 AYLTGTKPARLKELGPTGWRLRWRVL 147 >gi|308188655|ref|YP_003932786.1| 50S ribosomal protein L28 [Pantoea vagans C9-1] gi|308059165|gb|ADO11337.1| 50S ribosomal protein L28 [Pantoea vagans C9-1] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVSVKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ + Sbjct: 61 KKG-IDTVLSDMRAR 74 >gi|300721249|ref|YP_003710519.1| 50S ribosomal subunit protein L28 [Xenorhabdus nematophila ATCC 19061] gi|297627736|emb|CBJ88262.1| 50S ribosomal subunit protein L28 [Xenorhabdus nematophila ATCC 19061] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSVKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLAELRAR 74 >gi|156369464|ref|XP_001627996.1| predicted protein [Nematostella vectensis] gi|156389150|ref|XP_001634855.1| predicted protein [Nematostella vectensis] gi|156214961|gb|EDO35933.1| predicted protein [Nematostella vectensis] gi|156221942|gb|EDO42792.1| predicted protein [Nematostella vectensis] Length = 113 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K +M G+ + + KT+R + PN+ R S+++E+ + A+R +++ GG D + Sbjct: 25 GKGIMFGHVETFSGKKTKRAWKPNVHRKKYYSEVLEKNLSYNFTTHAMRCIDKAGGFDNY 84 Query: 69 LSNSKKENLSARMR-TLRSQILKKMSEKS 96 + N+K L ++ L++ + K +S KS Sbjct: 85 ILNTKDSKLQSKAAIELKNLMSKVLSCKS 113 >gi|256422104|ref|YP_003122757.1| ribosomal protein L28 [Chitinophaga pinensis DSM 2588] gi|256037012|gb|ACU60556.1| ribosomal protein L28 [Chitinophaga pinensis DSM 2588] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K ++G+ VS +N KT+RRFLPNL + ++ L++S LR++ Sbjct: 1 MARVCQVTGKKPITGHHVSFSNIKTKRRFLPNLQKKRFFLAEEDRWISLKVSADGLRTIN 60 Query: 61 RQG 63 + G Sbjct: 61 KNG 63 >gi|239996972|ref|ZP_04717496.1| ribosomal protein L28 [Alteromonas macleodii ATCC 27126] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPTVGNNRSHARNATRRRFLPNLQTHRFWVESENRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLTDIRTR 74 >gi|227115113|ref|ZP_03828769.1| 50S ribosomal protein L28 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328062|ref|ZP_03832086.1| 50S ribosomal protein L28 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690460|ref|YP_003019650.1| ribosomal protein L28 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261823582|ref|YP_003261688.1| 50S ribosomal protein L28 [Pectobacterium wasabiae WPP163] gi|259646746|sp|C6DIC0|RL28_PECCP RecName: Full=50S ribosomal protein L28 gi|251757038|gb|ACT15114.1| ribosomal protein L28 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261607595|gb|ACX90081.1| ribosomal protein L28 [Pectobacterium wasabiae WPP163] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVAGNNRSHALNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L AR Sbjct: 61 KKG------IETVLADLRARGEK 77 >gi|50119107|ref|YP_048274.1| 50S ribosomal protein L28 [Pectobacterium atrosepticum SCRI1043] gi|67461395|sp|Q6DAV6|RL28_ERWCT RecName: Full=50S ribosomal protein L28 gi|49609633|emb|CAG73066.1| 50S ribosomal protein L28 [Pectobacterium atrosepticum SCRI1043] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVAGNNRSHALNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L R Sbjct: 61 KKG------IETVLADLRTRGEK 77 >gi|310798120|gb|EFQ33013.1| ribosomal L28 family protein [Glomerella graminicola M1.001] Length = 256 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Query: 11 TVMSGNKVSHANNK-TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + G+ VS + + T R + PN+ R L S+ + + R++ LR+V R+GG+D ++ Sbjct: 77 RIRHGHNVSEKHGQVTPRTWRPNVHRKRLWSEALGAWVRARLTTRVLRTVRREGGIDAYV 136 Query: 70 SNSKK---ENLSARMRTLRSQILKKMSEKS 96 + +K L LR + + ++ Sbjct: 137 TKAKPARVRELGPGGWRLRWLVANSPAFRA 166 >gi|16762581|ref|NP_458198.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767013|ref|NP_462628.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144070|ref|NP_807412.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415618|ref|YP_152693.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182221|ref|YP_218638.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167549024|ref|ZP_02342783.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994349|ref|ZP_02575441.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168235333|ref|ZP_02660391.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241907|ref|ZP_02666839.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260518|ref|ZP_02682491.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464964|ref|ZP_02698856.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818442|ref|ZP_02830442.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443533|ref|YP_002042978.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451754|ref|YP_002047760.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471286|ref|ZP_03077270.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736234|ref|YP_002116663.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250195|ref|YP_002148660.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264661|ref|ZP_03164735.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364545|ref|YP_002144182.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242068|ref|YP_002217689.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387542|ref|ZP_03214154.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928593|ref|ZP_03219792.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354670|ref|YP_002228471.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858965|ref|YP_002245616.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213029141|ref|ZP_03343588.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213161282|ref|ZP_03346992.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418640|ref|ZP_03351706.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425230|ref|ZP_03357980.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581868|ref|ZP_03363694.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615653|ref|ZP_03371479.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647925|ref|ZP_03377978.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855128|ref|ZP_03383368.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585528|ref|YP_002639327.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910237|ref|ZP_04654074.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289810524|ref|ZP_06541153.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289824122|ref|ZP_06543719.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61230438|sp|P0A2A5|RL28_SALTY RecName: Full=50S ribosomal protein L28 gi|61230442|sp|P0A2A6|RL28_SALTI RecName: Full=50S ribosomal protein L28 gi|67461312|sp|Q5PC31|RL28_SALPA RecName: Full=50S ribosomal protein L28 gi|75479872|sp|Q57IA5|RL28_SALCH RecName: Full=50S ribosomal protein L28 gi|226699156|sp|B5EXE2|RL28_SALA4 RecName: Full=50S ribosomal protein L28 gi|226699157|sp|B5FM61|RL28_SALDC RecName: Full=50S ribosomal protein L28 gi|226699158|sp|B5R5G1|RL28_SALEP RecName: Full=50S ribosomal protein L28 gi|226699159|sp|B5RGF0|RL28_SALG2 RecName: Full=50S ribosomal protein L28 gi|226699160|sp|B4T9C2|RL28_SALHS RecName: Full=50S ribosomal protein L28 gi|226699161|sp|B4SXD9|RL28_SALNS RecName: Full=50S ribosomal protein L28 gi|226699162|sp|B5BI11|RL28_SALPK RecName: Full=50S ribosomal protein L28 gi|226699163|sp|B4TZX9|RL28_SALSV RecName: Full=50S ribosomal protein L28 gi|254801374|sp|C0Q1X0|RL28_SALPC RecName: Full=50S ribosomal protein L28 gi|25295489|pir||AE0971 50S ribosomal chain protein L28 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|2842791|gb|AAC01771.1| L28 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422296|gb|AAL22587.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504886|emb|CAD03265.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139707|gb|AAO71272.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129875|gb|AAV79381.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129854|gb|AAX67557.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194402196|gb|ACF62418.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410058|gb|ACF70277.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457650|gb|EDX46489.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711736|gb|ACF90957.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632365|gb|EDX50849.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096022|emb|CAR61609.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213898|gb|ACH51295.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242916|gb|EDY25536.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291293|gb|EDY30645.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936584|gb|ACH73917.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604640|gb|EDZ03185.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322026|gb|EDZ07224.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274451|emb|CAR39483.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325763|gb|EDZ13602.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327770|gb|EDZ14534.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338807|gb|EDZ25571.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344302|gb|EDZ31066.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350254|gb|EDZ36885.1| ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710768|emb|CAR35129.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470056|gb|ACN47886.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248876|emb|CBG26730.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995989|gb|ACY90874.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160265|emb|CBW19788.1| 50S ribosomal subunit protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914754|dbj|BAJ38728.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088148|emb|CBY97910.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322612894|gb|EFY09846.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618959|gb|EFY15846.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625264|gb|EFY22091.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630069|gb|EFY26842.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634260|gb|EFY30995.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635839|gb|EFY32548.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643023|gb|EFY39600.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645049|gb|EFY41580.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649851|gb|EFY46274.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653058|gb|EFY49393.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661123|gb|EFY57351.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662388|gb|EFY58601.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667266|gb|EFY63432.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674357|gb|EFY70450.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678435|gb|EFY74496.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322687123|gb|EFY83096.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716709|gb|EFZ08280.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132088|gb|ADX19518.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195847|gb|EFZ81019.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198236|gb|EFZ83342.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200854|gb|EFZ85924.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206608|gb|EFZ91566.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323216233|gb|EGA00961.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220456|gb|EGA04910.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225319|gb|EGA09553.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228433|gb|EGA12564.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234254|gb|EGA18342.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237239|gb|EGA21306.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244758|gb|EGA28762.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245867|gb|EGA29857.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250950|gb|EGA34826.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323262226|gb|EGA45787.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264563|gb|EGA48067.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268853|gb|EGA52311.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625473|gb|EGE31818.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629809|gb|EGE36152.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332990577|gb|AEF09560.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + L AR Sbjct: 61 KKG------IETVLSELRARGEK 77 >gi|70993812|ref|XP_751753.1| 50S ribosomal protein L24 [Aspergillus fumigatus Af293] gi|66849387|gb|EAL89715.1| 50S ribosomal protein L24 [Aspergillus fumigatus Af293] gi|159125327|gb|EDP50444.1| 50S ribosomal protein L24 [Aspergillus fumigatus A1163] Length = 212 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 69 GAMIQFGNKISKGRNEGKTRRFWKPNVRRKKLWSEALGEYLFIKVTRKALRTIWKSGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + L LR ++++ Sbjct: 129 NYLLDDRPGRIKELGIFGWELRWKVMQ 155 >gi|188532228|ref|YP_001906025.1| 50S ribosomal protein L28 [Erwinia tasmaniensis Et1/99] gi|259906760|ref|YP_002647116.1| 50S ribosomal protein L28 [Erwinia pyrifoliae Ep1/96] gi|292486567|ref|YP_003529435.1| 50S ribosomal protein L28 [Erwinia amylovora CFBP1430] gi|292897805|ref|YP_003537174.1| 50S ribosomal protein L28 [Erwinia amylovora ATCC 49946] gi|226694787|sp|B2VF68|RL28_ERWT9 RecName: Full=50S ribosomal protein L28 gi|188027270|emb|CAO95113.1| 50S ribosomal protein L28 [Erwinia tasmaniensis Et1/99] gi|224962382|emb|CAX53837.1| 50S ribosomal protein L28 [Erwinia pyrifoliae Ep1/96] gi|283476546|emb|CAY72374.1| 50S ribosomal protein L28 [Erwinia pyrifoliae DSM 12163] gi|291197653|emb|CBJ44748.1| 50S ribosomal protein L28 [Erwinia amylovora ATCC 49946] gi|291551982|emb|CBA19019.1| 50S ribosomal protein L28 [Erwinia amylovora CFBP1430] gi|312170628|emb|CBX78891.1| 50S ribosomal protein L28 [Erwinia amylovora ATCC BAA-2158] Length = 78 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L R Sbjct: 61 KKG------IETVLADLRTRGEK 77 >gi|255533402|ref|YP_003093774.1| 50S ribosomal protein L28 [Pedobacter heparinus DSM 2366] gi|255346386|gb|ACU05712.1| ribosomal protein L28 [Pedobacter heparinus DSM 2366] Length = 77 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K M+G VSH+N KT+R+F PNL ++ L++S A++++ Sbjct: 1 MSRVCDLTGKMAMAGFNVSHSNVKTKRKFYPNLQLQKFYIPEEDRWITLKVSTSAIKTIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|156972976|ref|YP_001443883.1| ribosomal protein L28 [Vibrio harveyi ATCC BAA-1116] gi|262392594|ref|YP_003284448.1| 50S ribosomal protein L28p [Vibrio sp. Ex25] gi|269959365|ref|ZP_06173748.1| ribosomal protein L28 [Vibrio harveyi 1DA3] gi|269965913|ref|ZP_06180006.1| ribosomal protein L28 [Vibrio alginolyticus 40B] gi|166228172|sp|A7MSP8|RL28_VIBHB RecName: Full=50S ribosomal protein L28 gi|156524570|gb|ABU69656.1| hypothetical protein VIBHAR_00654 [Vibrio harveyi ATCC BAA-1116] gi|262336188|gb|ACY49983.1| LSU ribosomal protein L28p [Vibrio sp. Ex25] gi|269829466|gb|EEZ83707.1| ribosomal protein L28 [Vibrio alginolyticus 40B] gi|269835802|gb|EEZ89878.1| ribosomal protein L28 [Vibrio harveyi 1DA3] Length = 78 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDTVLADMRAR 74 >gi|207342192|gb|EDZ70031.1| YMR193Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 175 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 52/89 (58%), Gaps = 3/89 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V GN +S + KTR+++LPN+ + L S+ + +K ++++ L+++ ++GG+D + Sbjct: 76 GSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNY 135 Query: 69 LSN---SKKENLSARMRTLRSQILKKMSE 94 L+ ++ + L LR ++LK+ E Sbjct: 136 LTKEKSARIKELGPTGWKLRYRVLKRKDE 164 >gi|127514408|ref|YP_001095605.1| ribosomal protein L28 [Shewanella loihica PV-4] gi|166226619|sp|A3QIP8|RL28_SHELP RecName: Full=50S ribosomal protein L28 gi|126639703|gb|ABO25346.1| LSU ribosomal protein L28P [Shewanella loihica PV-4] Length = 78 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLR+S +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNATRRRFLPNLQNHRFWLEDEKRFVQLRVSTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|300714650|ref|YP_003739453.1| 50S ribosomal protein L28 [Erwinia billingiae Eb661] gi|299060486|emb|CAX57593.1| 50S ribosomal protein L28 [Erwinia billingiae Eb661] Length = 78 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHAMNATKRRFLPNLHSHRFWVESEKRFVTLRVTAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + +L R Sbjct: 61 KKG------IETVLADLRTRGEK 77 >gi|33151901|ref|NP_873254.1| 50S ribosomal protein L28 [Haemophilus ducreyi 35000HP] gi|67461505|sp|Q7VN52|RL28_HAEDU RecName: Full=50S ribosomal protein L28 gi|33148122|gb|AAP95643.1| 50S ribosomal protein L28 [Haemophilus ducreyi 35000HP] Length = 78 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + LR++ +R ++ Sbjct: 1 MSRVCQVTSKRPAVGNNRSHALNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLAEIRAR 74 >gi|119773469|ref|YP_926209.1| 50S ribosomal protein L28 [Shewanella amazonensis SB2B] gi|166226616|sp|A1S2D3|RL28_SHEAM RecName: Full=50S ribosomal protein L28 gi|119765969|gb|ABL98539.1| LSU ribosomal protein L28P [Shewanella amazonensis SB2B] Length = 78 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLR+S +R ++ Sbjct: 1 MSRVCQVTGKRPMVGNNRSHAKNATRRRFLPNLQNHRFWLETEKRFVQLRVSTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|37678470|ref|NP_933079.1| 50S ribosomal protein L28 [Vibrio vulnificus YJ016] gi|320157666|ref|YP_004190045.1| 50S ribosomal protein L28p [Vibrio vulnificus MO6-24/O] gi|326423774|ref|NP_759801.2| 50S ribosomal protein L28 [Vibrio vulnificus CMCP6] gi|61216002|sp|Q7MPS6|RL28_VIBVY RecName: Full=50S ribosomal protein L28 gi|37197210|dbj|BAC93050.1| ribosomal protein L28 [Vibrio vulnificus YJ016] gi|319932978|gb|ADV87842.1| LSU ribosomal protein L28p [Vibrio vulnificus MO6-24/O] gi|319999136|gb|AAO09328.2| ribosomal protein L28 [Vibrio vulnificus CMCP6] Length = 78 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDVVLADMRAR 74 >gi|115391337|ref|XP_001213173.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194097|gb|EAU35797.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 212 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 69 GVMIQFGNKISKGRNEGKTRRMWKPNVRRKKLYSEALGEDLYIKVTRKALRTIRKAGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + L LR ++++ Sbjct: 129 NYLLDDRPGRIKELGIFGWELRWRVMQ 155 >gi|298373102|ref|ZP_06983092.1| ribosomal protein L28 [Bacteroidetes oral taxon 274 str. F0058] gi|298276006|gb|EFI17557.1| ribosomal protein L28 [Bacteroidetes oral taxon 274 str. F0058] Length = 86 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN VSH+N KT+R F NL + LRIS LR++ Sbjct: 1 MSRVCQITGKRAMGGNNVSHSNRKTKRLFDVNLFNKKFYYVEEDCWISLRISAAGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L N+ + Sbjct: 61 KNG-LDAALKNAVAK 74 >gi|121707801|ref|XP_001271945.1| 50S ribosomal protein L24 [Aspergillus clavatus NRRL 1] gi|119400093|gb|EAW10519.1| 50S ribosomal protein L24 [Aspergillus clavatus NRRL 1] Length = 212 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 69 GAMIQFGNKISKGRNEGKTRRSWKPNVRRKKLWSEALGEFLFIKVTRKALRTIWKSGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + L LR ++++ Sbjct: 129 NYLLDDRPGRIKELGMFGWELRWKVMQ 155 >gi|312213496|emb|CBX93578.1| similar to 50S ribosomal protein L24 [Leptosphaeria maculans] Length = 490 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN VS KTRR + PN+ +L S ++++K +LR++ L++++R+GGLD +L Sbjct: 91 MIQFGNNVSKKTETKTRRVWRPNVLSKSLYSVVLKKKIKLRVTANVLKTIDREGGLDEYL 150 Query: 70 SNS---KKENLSARMRTLRSQILKK 91 + + L LR ++++ Sbjct: 151 LKDSEHRIKELGPMGWALRWTLMQR 175 >gi|149908602|ref|ZP_01897264.1| 50S ribosomal protein L28 [Moritella sp. PE36] gi|149910344|ref|ZP_01898987.1| 50S ribosomal protein L28 [Moritella sp. PE36] gi|149806592|gb|EDM66560.1| 50S ribosomal protein L28 [Moritella sp. PE36] gi|149808436|gb|EDM68373.1| 50S ribosomal protein L28 [Moritella sp. PE36] Length = 78 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GN VSHA N+TRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MSKVCQVTGKKPAVGNNVSHAKNRTRRRFLPNLHTHRFWVESENRFVKLRLTCKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDSVLAEMRAR 74 >gi|332884209|gb|EGK04477.1| 50S ribosomal protein L28 [Dysgonomonas mossii DSM 22836] Length = 79 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+N KT+R+F NL R + L +S LR++ Sbjct: 1 MSKICQITGKKAMVGNNVSHSNRKTKRKFNVNLFRKKFYWVEEDCWISLNVSAAGLRTIN 60 Query: 61 RQGGLDRFLSNS 72 + G LD L + Sbjct: 61 KIG-LDAALKRA 71 >gi|119500374|ref|XP_001266944.1| 50S ribosomal protein L24 [Neosartorya fischeri NRRL 181] gi|119415109|gb|EAW25047.1| 50S ribosomal protein L24 [Neosartorya fischeri NRRL 181] Length = 212 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 69 GAMIQFGNKISKGRNEGKTRRFWKPNVRRKKLWSEALGEYLYIKVTRKALRTIWKSGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + L LR ++++ Sbjct: 129 NYLLDDRPGRIKELGIFGWELRWKVMQ 155 >gi|237728934|ref|ZP_04559415.1| 50S ribosomal protein L28 [Citrobacter sp. 30_2] gi|283787729|ref|YP_003367594.1| 50S ribosomal subunit protein L28 [Citrobacter rodentium ICC168] gi|226909556|gb|EEH95474.1| 50S ribosomal protein L28 [Citrobacter sp. 30_2] gi|282951183|emb|CBG90876.1| 50S ribosomal subunit protein L28 [Citrobacter rodentium ICC168] Length = 78 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 ++G + L AR Sbjct: 61 KKG------IETVLSELRARGEK 77 >gi|258653985|ref|YP_003203141.1| 50S ribosomal protein L28 [Nakamurella multipartita DSM 44233] gi|258557210|gb|ACV80152.1| ribosomal protein L28 [Nakamurella multipartita DSM 44233] Length = 78 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T G VSH++ +T RR+ PNL + + +LR+S LR ++ Sbjct: 1 MSARCQVTGAEPGFGKSVSHSHQRTNRRWEPNLQHRRFYVPSLRRTVRLRVSTKGLRIID 60 Query: 61 RQGGLDRFLSNSKKEN 76 R+G +D ++ + Sbjct: 61 RRG-IDAVVAQILARD 75 >gi|197286971|ref|YP_002152843.1| 50S ribosomal protein L28 [Proteus mirabilis HI4320] gi|227354790|ref|ZP_03839207.1| 50S ribosomal protein L28 [Proteus mirabilis ATCC 29906] gi|226699148|sp|B4F0W9|RL28_PROMH RecName: Full=50S ribosomal protein L28 gi|194684458|emb|CAR46203.1| 50S ribosomal protein L28 [Proteus mirabilis HI4320] gi|227165108|gb|EEI49939.1| 50S ribosomal protein L28 [Proteus mirabilis ATCC 29906] gi|301072221|gb|ADK56075.1| RpmB [Proteus mirabilis] gi|301072244|gb|ADK56097.1| RpmB [Proteus mirabilis] gi|312598045|gb|ADQ89979.1| ribosomal protein [Proteus mirabilis] gi|312598062|gb|ADQ89995.1| ribosomal protein [Proteus mirabilis] Length = 78 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K +SGN SHA N T+RRFLPNL + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IESVLADLRAR 74 >gi|323358133|ref|YP_004224529.1| ribosomal protein L28 [Microbacterium testaceum StLB037] gi|323274504|dbj|BAJ74649.1| ribosomal protein L28 [Microbacterium testaceum StLB037] Length = 78 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++T G+ +SH++ +T+RRF PN+ + T + + +L +S ++ ++ Sbjct: 1 MAAVCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYFVPSLGRNIKLNVSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G + +L A+ L Sbjct: 61 ARG------IEAVVRDLQAKGVKL 78 >gi|194099564|ref|YP_002002694.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae NCCP11945] gi|313667723|ref|YP_004048007.1| 50S ribosomal protein L28 [Neisseria lactamica ST-640] gi|193934854|gb|ACF30678.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae NCCP11945] gi|313005185|emb|CBN86618.1| 50S ribosomal protein L28 [Neisseria lactamica 020-06] gi|316984322|gb|EFV63296.1| ribosomal protein L28 [Neisseria meningitidis H44/76] gi|317165059|gb|ADV08600.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae TCDC-NG08107] Length = 71 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 T K MSGN VSHANNKT+RRFLPNL + + +LR+S ALR++++ G +D Sbjct: 2 TGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTIDKVG-IDV 60 Query: 68 FLSNSKKE 75 L++ + Sbjct: 61 VLADLRAR 68 >gi|299136010|ref|ZP_07029194.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX8] gi|298602134|gb|EFI58288.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX8] Length = 75 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC +T K ++GN VSHANNKTRRR+ PNL + + ++R+S +R+++ Sbjct: 1 MAKVCPITGKRTVTGNNVSHANNKTRRRWEPNLQLKRIWIPSENRFVRMRVSARGIRTIQ 60 Query: 61 RQGGLDRFLSNS 72 + G ++ L + Sbjct: 61 KLG-IEAALLKA 71 >gi|31340362|sp|Q8DDY1|RL28_VIBVU RecName: Full=50S ribosomal protein L28 Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL I + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHARNATKRRFLPNLQTIRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDVVLADMRAR 74 >gi|67461422|sp|Q6LVN3|RL28_PHOPR RecName: Full=50S ribosomal protein L28 Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDIVLAEMRVR 74 >gi|92115087|ref|YP_575015.1| 50S ribosomal protein L28P [Chromohalobacter salexigens DSM 3043] gi|122419199|sp|Q1QT92|RL28_CHRSD RecName: Full=50S ribosomal protein L28 gi|91798177|gb|ABE60316.1| LSU ribosomal protein L28P [Chromohalobacter salexigens DSM 3043] Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K ++GN VSH+ KTRRRF+PNL + ++ +LR+S +R ++ Sbjct: 1 MSQVCQVTGKRPVTGNNVSHSQRKTRRRFVPNLHTHRFWVEGEKRFVKLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ LS+ +K Sbjct: 61 KKG-IEEVLSDIRKR 74 >gi|108762247|ref|YP_634649.1| 50S ribosomal protein L28 [Myxococcus xanthus DK 1622] gi|108466127|gb|ABF91312.1| ribosomal protein L28 [Myxococcus xanthus DK 1622] Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K + GN VSHANN+ +RR LPNL M + +LR+S +R + Sbjct: 1 MSKVCQVTGKRPLVGNTVSHANNRHKRRSLPNLQWHRFWVPSMNRFVKLRVSTHGIRIIN 60 Query: 61 RQG 63 ++G Sbjct: 61 QRG 63 >gi|242769719|ref|XP_002341828.1| 50S ribosomal protein L24 [Talaromyces stipitatus ATCC 10500] gi|218725024|gb|EED24441.1| 50S ribosomal protein L24 [Talaromyces stipitatus ATCC 10500] Length = 247 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANNK--TRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 T+ GNK+S NK TRR + PN+ L S+ + ++ +++++ ALR++ + GGLD Sbjct: 73 GVTISFGNKISKGRNKGKTRRSWKPNVRWKKLPSEALGEEVFVKLTRKALRTIRKCGGLD 132 Query: 67 RFLS---NSKKENLSARMRTLRSQILKKMSEK 95 +L S+ + L LR +I++ S K Sbjct: 133 NYLLCDKPSRLKELGLTGWKLRYRIMQSPSMK 164 >gi|213963580|ref|ZP_03391832.1| ribosomal protein L28 [Capnocytophaga sputigena Capno] gi|213953708|gb|EEB65038.1| ribosomal protein L28 [Capnocytophaga sputigena Capno] Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC+LT K + GN VSHA NKT+R+F NL + L++S A+++++ Sbjct: 1 MARVCDLTGKKALVGNNVSHAMNKTKRKFNVNLRTKRFFIPEENRWITLKVSAAAIKTID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|260562923|ref|ZP_05833409.1| ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M] gi|260152939|gb|EEW88031.1| ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M] Length = 59 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 42/59 (71%), Positives = 48/59 (81%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 MSR CELT K+V GN VSHANN+TRRRFLPNLC +TLIS+ + Q Y+LRIS ALRSV Sbjct: 1 MSRACELTGKSVQYGNNVSHANNRTRRRFLPNLCNVTLISETLGQSYRLRISANALRSV 59 >gi|332139462|ref|YP_004425200.1| ribosomal protein L28 [Alteromonas macleodii str. 'Deep ecotype'] gi|226738024|sp|B4S2C3|RL28_ALTMD RecName: Full=50S ribosomal protein L28 gi|327549484|gb|AEA96202.1| ribosomal protein L28 [Alteromonas macleodii str. 'Deep ecotype'] Length = 78 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPTVGNNRSHARNATRRRFLPNLQTHRFWVESESRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLTDIRAR 74 >gi|302527617|ref|ZP_07279959.1| ribosomal protein L28 [Streptomyces sp. AA4] gi|302436512|gb|EFL08328.1| ribosomal protein L28 [Streptomyces sp. AA4] Length = 78 Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS VC++T + G +VSH++ +T RR+ PNL + + +L++S +++++ Sbjct: 1 MSAVCQVTGRKPGYGKQVSHSHRRTSRRWEPNLQTRRYYVPSLGRTVRLKVSAKGMKTID 60 Query: 61 RQGGLDRFLSN 71 ++G +D +++ Sbjct: 61 KRG-IDAVVAD 70 >gi|167626711|ref|YP_001677211.1| 50S ribosomal protein L28 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667286|ref|ZP_04754864.1| 50S ribosomal protein L28 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875837|ref|ZP_05248547.1| 50S ribosomal protein L28 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189029441|sp|B0U0F9|RL28_FRAP2 RecName: Full=50S ribosomal protein L28 gi|167596712|gb|ABZ86710.1| 50S ribosomal protein L28 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841858|gb|EET20272.1| 50S ribosomal protein L28 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 78 Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +GN VSHA NKTRRRFLPNL + + +L++S +R ++ Sbjct: 1 MSKVCIVTGKRPATGNNVSHAQNKTRRRFLPNLHTHRFWVESENKYIKLKVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS+ + + Sbjct: 61 KKG-IDTVLSDLRAQ 74 >gi|294142829|ref|YP_003558807.1| 50S ribosomal protein L28 [Shewanella violacea DSS12] gi|293329298|dbj|BAJ04029.1| ribosomal protein L28 [Shewanella violacea DSS12] Length = 78 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSRVCQVTGKRPMVGNNRSHAKNATRRRFLPNLQNHRFWLEGEKRFVKLRISTKGIRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|317038264|ref|XP_001401958.2| 50S ribosomal protein L24 [Aspergillus niger CBS 513.88] Length = 212 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 5/87 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + GNK+S N KTRR + PN+ R L S+ + + +++++ ALR++ + GGLD Sbjct: 69 GAMIQFGNKISQGRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRKALRTIRKAGGLD 128 Query: 67 RFLSNSKK---ENLSARMRTLRSQILK 90 +L + + + LR +I++ Sbjct: 129 NYLLSDRPGRIREMGIFGWELRWKIMQ 155 >gi|327483098|gb|AEA77505.1| LSU ribosomal protein L28p [Vibrio cholerae LMA3894-4] Length = 78 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+ RFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAKNATKYRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + Sbjct: 61 KKG-IDAVLVEIRAR 74 >gi|297170291|gb|ADI21327.1| hypothetical protein [uncultured gamma proteobacterium HF0010_10D20] Length = 78 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M+GN VS A N+T+RRFLPNL + + + L +S +R ++ Sbjct: 1 MSKICQVTGKKPMAGNNVSKALNRTKRRFLPNLNQHKFWVESENKYVSLTVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + + Sbjct: 61 KKG-IDEVLKDIRSR 74 >gi|90580920|ref|ZP_01236722.1| putative ribosomal protein L28 [Vibrio angustum S14] gi|330447139|ref|ZP_08310789.1| ribosomal protein L28 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|90437991|gb|EAS63180.1| putative ribosomal protein L28 [Vibrio angustum S14] gi|328491330|dbj|GAA05286.1| ribosomal protein L28 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 78 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + Sbjct: 61 KKG-IDVVLGEMRAR 74 >gi|255037319|ref|YP_003087940.1| 50S ribosomal protein L28 [Dyadobacter fermentans DSM 18053] gi|254950075|gb|ACT94775.1| ribosomal protein L28 [Dyadobacter fermentans DSM 18053] Length = 79 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC+++ K GN VSHANNKT+R+F PNL + + L+++ ALR++ Sbjct: 1 MAKVCQISGKRTRVGNNVSHANNKTKRKFFPNLQKKRFFLPSSGEWVTLKVAASALRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ + + + Sbjct: 61 KNG-IEATIQKAYDK 74 >gi|54307424|ref|YP_128444.1| putative ribosomal protein L28 [Photobacterium profundum SS9] gi|46911844|emb|CAG18642.1| putative ribosomal protein L28 [Photobacterium profundum SS9] Length = 83 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 6 MSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 65 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 66 KKG-IDIVLAEMRVR 79 >gi|328868000|gb|EGG16381.1| hypothetical protein DFA_09412 [Dictyostelium fasciculatum] Length = 146 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 52/95 (54%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S+ K + GN +S ++ KTRR + PN+ T S +++ + ++ ++ +R +++ Sbjct: 28 SQRGLYGGKLIQYGNIISFSHKKTRRNWKPNVQAKTYFSHLLDAEVKVNVTTYTIRCIDK 87 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 G D ++ +K +++++ + T +LK + ++ Sbjct: 88 AGTFDNYILKTKNKDMASELGTDLKSVLKNVLKQQ 122 >gi|152964257|ref|YP_001360041.1| ribosomal protein L28 [Kineococcus radiotolerans SRS30216] gi|151358774|gb|ABS01777.1| ribosomal protein L28 [Kineococcus radiotolerans SRS30216] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T G VSH++ +T RRF PN+ R + + L +S +++V+ Sbjct: 1 MSARCQVTGAVPGFGKSVSHSHRRTNRRFDPNVQRKRWFVPSLGRTVTLTVSARGIKTVD 60 Query: 61 RQG 63 +G Sbjct: 61 ERG 63 >gi|124002613|ref|ZP_01687465.1| ribosomal protein L28 [Microscilla marina ATCC 23134] gi|123991841|gb|EAY31228.1| ribosomal protein L28 [Microscilla marina ATCC 23134] Length = 83 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 42/63 (66%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R+CE+T K SGN VSHANNKTRR+F PNL + + + L++S A+R++ Sbjct: 1 MARICEVTGKRTQSGNNVSHANNKTRRKFYPNLQKKRFFLESKGEWITLKVSTQAIRTIN 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|71279933|ref|YP_266976.1| 50S ribosomal protein L28 [Colwellia psychrerythraea 34H] gi|123634189|sp|Q48AD7|RL28_COLP3 RecName: Full=50S ribosomal protein L28 gi|71145673|gb|AAZ26146.1| ribosomal protein L28 [Colwellia psychrerythraea 34H] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN SHA N TRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MSKICQVTGKVPMVGNNRSHARNATRRRFLPNLQSHRFWVESENRFVKLRLTPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDVVLTDIRAR 74 >gi|254784437|ref|YP_003071865.1| 50S ribosomal protein L28 [Teredinibacter turnerae T7901] gi|259646751|sp|C5BLG3|RL28_TERTT RecName: Full=50S ribosomal protein L28 gi|237684904|gb|ACR12168.1| ribosomal protein L28 [Teredinibacter turnerae T7901] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K ++G+ VSHA N T+RRFLPNL + ++ +LR+S +R ++ Sbjct: 1 MAKVCQVTGKRPVTGHNVSHAKNHTKRRFLPNLHTHRFWVESEKRFVKLRVSSKGMRIID 60 Query: 61 RQG 63 + G Sbjct: 61 KNG 63 >gi|209693806|ref|YP_002261734.1| 50S ribosomal protein L28 [Aliivibrio salmonicida LFI1238] gi|226738023|sp|B6EPP2|RL28_ALISL RecName: Full=50S ribosomal protein L28 gi|208007757|emb|CAQ77876.1| 50S ribosomal protein L28 [Aliivibrio salmonicida LFI1238] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D LS + Sbjct: 61 KKG-IDVVLSEMRAR 74 >gi|114564977|ref|YP_752491.1| ribosomal protein L28 [Shewanella frigidimarina NCIMB 400] gi|122298393|sp|Q07WG2|RL28_SHEFN RecName: Full=50S ribosomal protein L28 gi|114336270|gb|ABI73652.1| LSU ribosomal protein L28P [Shewanella frigidimarina NCIMB 400] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLR+S +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + L AR + Sbjct: 61 KKG------IEVIVKELRARGEKV 78 >gi|237806958|ref|YP_002891398.1| 50S ribosomal protein L28 [Tolumonas auensis DSM 9187] gi|259646752|sp|C4L813|RL28_TOLAT RecName: Full=50S ribosomal protein L28 gi|237499219|gb|ACQ91812.1| ribosomal protein L28 [Tolumonas auensis DSM 9187] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N TRRRFLPNL + ++ LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPTVGNNRSHAKNATRRRFLPNLQSHRFWVEGEKRFVTLRLTPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ L++ + Sbjct: 61 KLG-IEAVLADIRAR 74 >gi|254482757|ref|ZP_05095995.1| ribosomal protein L28 [marine gamma proteobacterium HTCC2148] gi|214037116|gb|EEB77785.1| ribosomal protein L28 [marine gamma proteobacterium HTCC2148] Length = 78 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K ++GN VSHA N+TRRRFLPNL + + ++ LR+S +R ++ Sbjct: 1 MARVCQVTGKRPVTGNNVSHAKNRTRRRFLPNLHKHRFWVESEKRFVSLRVSSKGMRIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + E + +R + Sbjct: 61 KKG------IETVLEEMRSRGEKV 78 >gi|170728879|ref|YP_001762905.1| 50S ribosomal protein L28 [Shewanella woodyi ATCC 51908] gi|226699165|sp|B1KL04|RL28_SHEWM RecName: Full=50S ribosomal protein L28 gi|169814226|gb|ACA88810.1| ribosomal protein L28 [Shewanella woodyi ATCC 51908] Length = 78 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNATRRRFLPNLQNHRFWLEGEKRFVKLRISTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|118138114|pdb|2I2T|X Chain X, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138168|pdb|2I2V|X Chain X, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|224510753|pdb|3FIK|X Chain X, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|294662241|pdb|2WWQ|0 Chain 0, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308388030|pdb|3OFQ|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388061|pdb|3OFR|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320088|pdb|3OFC|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320119|pdb|3OFD|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320192|pdb|3OFZ|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320223|pdb|3OG0|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113677|pdb|3OAS|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113708|pdb|3OAT|X Chain X, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|329666039|pdb|3J01|X Chain X, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 77 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC++T K ++GN SHA N T+RRFLPNL + ++ LR+S +R +++ Sbjct: 1 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 60 Query: 62 QGGLDRFLSNSKKE 75 +G +D L+ + Sbjct: 61 KG-IDTVLAELRAR 73 >gi|167622370|ref|YP_001672664.1| 50S ribosomal protein L28 [Shewanella halifaxensis HAW-EB4] gi|189029454|sp|B0TQL2|RL28_SHEHH RecName: Full=50S ribosomal protein L28 gi|167352392|gb|ABZ75005.1| ribosomal protein L28 [Shewanella halifaxensis HAW-EB4] Length = 78 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLRIS +R ++ Sbjct: 1 MSRVCQVTGKRPMVGNNRSHAKNATRRRFLPNLQNHRFWLENEKRFVQLRISTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|224009912|ref|XP_002293914.1| RM24, ribosomal protein 24 mitochondrial large ribosomal subunit [Thalassiosira pseudonana CCMP1335] gi|220970586|gb|EED88923.1| RM24, ribosomal protein 24 mitochondrial large ribosomal subunit [Thalassiosira pseudonana CCMP1335] Length = 70 Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K V GN V + KTRRR+ PN+ + S+I+ + I+ ALRS+++ GGLD + Sbjct: 9 GKDVRFGNNVPFSLKKTRRRWNPNVQLKRVYSEILGEMIPFHITTSALRSIDKMGGLDNY 68 Query: 69 LS 70 L Sbjct: 69 LL 70 >gi|332827125|gb|EGJ99910.1| 50S ribosomal protein L28 [Dysgonomonas gadei ATCC BAA-286] Length = 79 Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+N KT+R+F NL + + L +S LR++ Sbjct: 1 MSKICQITGKKAMVGNNVSHSNRKTKRKFNVNLFKKKFYWVEEDCWVSLNVSAAGLRTIN 60 Query: 61 RQGGLDRFLSNS 72 + G LD + + Sbjct: 61 KIG-LDAAIKRA 71 >gi|297798834|ref|XP_002867301.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp. lyrata] gi|297313137|gb|EFH43560.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp. lyrata] Length = 212 Score = 87.0 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NK+RR + PN+ L S I ++ +++++ ALR ++ Sbjct: 43 AKRGLYAGRHIQYGNRVSEDGGNKSRRCWKPNVQEKRLFSYIFDRHIKVKVTTHALRCID 102 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + + M +++ + Sbjct: 103 KAGGIDEYLLKTPYQKMDTEMGLYWKTKVEQRYAE 137 >gi|306822127|ref|ZP_07455509.1| 50S ribosomal protein L28 [Bifidobacterium dentium ATCC 27679] gi|304554509|gb|EFM42414.1| 50S ribosomal protein L28 [Bifidobacterium dentium ATCC 27679] Length = 110 Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ GN VSH++ KTRR F PNL R + + L ++ +++++ Sbjct: 30 MSKHCQVLGTRAHVGNAVSHSHRKTRRTFSPNLQRKRYYVPSLGRTVTLTLTPKGMKTID 89 Query: 61 RQG 63 RQG Sbjct: 90 RQG 92 >gi|221135335|ref|ZP_03561638.1| ribosomal protein L28 [Glaciecola sp. HTCC2999] Length = 78 Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K GN SHA N TRRRFLPNL + + +LR++ +R ++ Sbjct: 1 MAKVCQVTGKRPAVGNNRSHARNATRRRFLPNLQTHRFWVESENRFVKLRLTPKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDSVLTEMRAR 74 >gi|212635016|ref|YP_002311541.1| 50S ribosomal protein L28 [Shewanella piezotolerans WP3] gi|226699164|sp|B8CM30|RL28_SHEPW RecName: Full=50S ribosomal protein L28 gi|212556500|gb|ACJ28954.1| Ribosomal protein L28 [Shewanella piezotolerans WP3] Length = 78 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNATRRRFLPNLQNHRFWLETEKRFVKLRISTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|332880090|ref|ZP_08447774.1| ribosomal protein L28 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682086|gb|EGJ54999.1| ribosomal protein L28 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 78 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC+LT K + GN VSHA NKT+R+F NL + L++S A+++++ Sbjct: 1 MARVCDLTGKKALVGNNVSHAMNKTKRKFNVNLRTKRFFIPEENRWITLKVSAAAIKTID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|77361557|ref|YP_341132.1| 50S ribosomal subunit protein L28 [Pseudoalteromonas haloplanktis TAC125] gi|76876468|emb|CAI87690.1| 50S ribosomal subunit protein L28 [Pseudoalteromonas haloplanktis TAC125] Length = 95 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K GN SHA N T+RRFLPNL + ++ LR + +R ++ Sbjct: 18 MAKVCQVTGKRPAVGNHRSHARNATKRRFLPNLQTHRFWVESEKRFVTLRTTTKGMRIID 77 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 78 KKG-IDTVLTEIRAR 91 >gi|119470591|ref|ZP_01613294.1| 50S ribosomal subunit protein L28 [Alteromonadales bacterium TW-7] gi|119446292|gb|EAW27569.1| 50S ribosomal subunit protein L28 [Alteromonadales bacterium TW-7] Length = 78 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GN SHA N TRRRFLPNL + ++ LR + +R ++ Sbjct: 1 MSKVCQVTGKRPAVGNHRSHARNATRRRFLPNLQTHRFWVESEKRFVTLRTTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDAVLTEIRAR 74 >gi|118471258|ref|YP_890290.1| ribosomal protein L28 [Mycobacterium smegmatis str. MC2 155] gi|118172545|gb|ABK73441.1| ribosomal protein L28 [Mycobacterium smegmatis str. MC2 155] Length = 78 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ +T RR+ PN+ T ++ +LR+S ++ ++ Sbjct: 1 MSAHCQVTGRGPGFGNSVSHSHRRTPRRWDPNIQNKTYYLPSEGRRIRLRVSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVARMRAR 74 >gi|224283446|ref|ZP_03646768.1| ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] Length = 115 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ +GN+VSH++ KTRRRF PNL + + L +S +++++ Sbjct: 18 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 77 Query: 61 RQG 63 R G Sbjct: 78 RIG 80 >gi|309802267|ref|ZP_07696375.1| ribosomal protein L28 [Bifidobacterium dentium JCVIHMP022] gi|308221150|gb|EFO77454.1| ribosomal protein L28 [Bifidobacterium dentium JCVIHMP022] Length = 152 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ GN VSH++ KTRR F PNL R + + L ++ +++++ Sbjct: 72 MSKHCQVLGTRAHVGNAVSHSHRKTRRTFSPNLQRKRYYVPSLGRTVTLTLTPKGMKTID 131 Query: 61 RQG 63 RQG Sbjct: 132 RQG 134 >gi|15235960|ref|NP_194874.1| ribosomal protein L28 family protein [Arabidopsis thaliana] gi|15724234|gb|AAL06510.1|AF412057_1 AT4g31460/F3L17_30 [Arabidopsis thaliana] gi|5262757|emb|CAB45905.1| putative protein [Arabidopsis thaliana] gi|7270049|emb|CAB79864.1| putative protein [Arabidopsis thaliana] gi|21593391|gb|AAM65340.1| unknown [Arabidopsis thaliana] gi|30102482|gb|AAP21159.1| At4g31460/F3L17_30 [Arabidopsis thaliana] gi|332660516|gb|AEE85916.1| Ribosomal L28 family [Arabidopsis thaliana] Length = 212 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GN+VS NK+RR + PN+ L S I + +++++ ALR ++ Sbjct: 43 AKRGLYAGRHIQYGNRVSEDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCID 102 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + GG+D +L + + + M ++ + Sbjct: 103 KAGGIDEYLLKTPYQKMDTEMGLYWKTKVEARYAE 137 >gi|157373527|ref|YP_001472127.1| ribosomal protein L28 [Shewanella sediminis HAW-EB3] gi|189029456|sp|A8FQ76|RL28_SHESH RecName: Full=50S ribosomal protein L28 gi|157315901|gb|ABV34999.1| ribosomal protein L28 [Shewanella sediminis HAW-EB3] Length = 78 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ +LRIS +R ++ Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEGEKRFVKLRISTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|255947924|ref|XP_002564729.1| Pc22g07040 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591746|emb|CAP97992.1| Pc22g07040 [Penicillium chrysogenum Wisconsin 54-1255] Length = 216 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 9 KKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 ++ GNK+S N KTRR + PN+ R + S + + +++++ ALRS+ + GLD Sbjct: 69 GASIRFGNKISKGRNEGKTRRSWKPNVRRKKIESKALGESVYIKVTRRALRSIYKAKGLD 128 Query: 67 RFLSN---SKKENLSARMRTLRSQILKKMSEK 95 +L + ++ + L LR QI++ + K Sbjct: 129 NYLLSDRPTRLKELGPFGWNLRHQIMQTPAIK 160 >gi|157963647|ref|YP_001503681.1| 50S ribosomal protein L28 [Shewanella pealeana ATCC 700345] gi|189029455|sp|A8H9A9|RL28_SHEPA RecName: Full=50S ribosomal protein L28 gi|157848647|gb|ABV89146.1| ribosomal protein L28 [Shewanella pealeana ATCC 700345] Length = 78 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN SHA N TRRRFLPNL + ++ QLRIS +R ++ Sbjct: 1 MSRVCQVTGKRPMVGNNRSHAKNSTRRRFLPNLQNHRFWLENEKRFVQLRISTKGMRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|310287798|ref|YP_003939056.1| ribosomal protein L28 [Bifidobacterium bifidum S17] gi|309251734|gb|ADO53482.1| ribosomal protein L28 [Bifidobacterium bifidum S17] Length = 115 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ +GN+VSH++ KTRRRF PNL + + L +S +++++ Sbjct: 18 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 77 Query: 61 RQG 63 R G Sbjct: 78 RIG 80 >gi|295394905|ref|ZP_06805118.1| 50S ribosomal protein L28 [Brevibacterium mcbrellneri ATCC 49030] gi|294972238|gb|EFG48100.1| 50S ribosomal protein L28 [Brevibacterium mcbrellneri ATCC 49030] Length = 78 Score = 86.2 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++T T G+ VSH+N +T+RRF PN+ + + + L +S ++ ++ Sbjct: 1 MAAVCQVTGTTPGFGHNVSHSNRRTKRRFDPNIQKKKYYVPSLRRNVTLTVSARGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R+G ++ L A+ L Sbjct: 61 RRG------IDTVVAELLAKGVKL 78 >gi|297171145|gb|ADI22155.1| hypothetical protein [uncultured gamma proteobacterium HF0200_24F15] Length = 78 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K ++GN VSHANN+ +R F PNL + + +LRIS LR ++ Sbjct: 1 MSRVCQITGKRSVAGNNVSHANNRNKRLFKPNLHVRKFWVESENRWVRLRISNKGLRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L + +K Sbjct: 61 KNG-IDAVLKDIRKR 74 >gi|313203650|ref|YP_004042307.1| LSU ribosomal protein l28p [Paludibacter propionicigenes WB4] gi|312442966|gb|ADQ79322.1| LSU ribosomal protein L28P [Paludibacter propionicigenes WB4] Length = 79 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L +S LR++ Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRTFDVNLFTKKFYWVEQDTWVSLNVSANGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD + + ++ Sbjct: 61 KIG-LDAAIKKASEK 74 >gi|315109324|gb|EFT81300.1| ribosomal protein L28 [Propionibacterium acnes HL030PA2] Length = 92 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++ GN VSH+ T+RR+ PN+ + + +K L ++ A++ ++ Sbjct: 15 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 74 Query: 61 RQG 63 R+G Sbjct: 75 RRG 77 >gi|315127737|ref|YP_004069740.1| 50S ribosomal subunit protein L28 [Pseudoalteromonas sp. SM9913] gi|315016251|gb|ADT69589.1| 50S ribosomal subunit protein L28 [Pseudoalteromonas sp. SM9913] Length = 95 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GN SHA N T+RRFLPNL + ++ LR + +R ++ Sbjct: 18 MSKVCQVTGKRPAVGNHRSHARNATKRRFLPNLQTHRFWVESEKRFVTLRTTTKGMRIID 77 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 78 KKG-IDTVLTEIRAR 91 >gi|59710734|ref|YP_203510.1| 50S ribosomal protein L28 [Vibrio fischeri ES114] gi|197333949|ref|YP_002154895.1| ribosomal protein L28 [Vibrio fischeri MJ11] gi|67461221|sp|Q5E8M4|RL28_VIBF1 RecName: Full=50S ribosomal protein L28 gi|226699183|sp|B5FFF7|RL28_VIBFM RecName: Full=50S ribosomal protein L28 gi|59478835|gb|AAW84622.1| 50S ribosomal subunit protein L28 [Vibrio fischeri ES114] gi|197315439|gb|ACH64886.1| ribosomal protein L28 [Vibrio fischeri MJ11] Length = 78 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K GN SHA N T+RRFLPNL + ++ +LR++ +R ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L++ + Sbjct: 61 KKG-IETVLADMRAR 74 >gi|297180599|gb|ADI16810.1| hypothetical protein [uncultured gamma proteobacterium HF0010_11K06] Length = 78 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++T KT M+GN VS A NKT+R+F+PNL R + + L +S +R ++ Sbjct: 1 MSKECQVTGKTPMAGNNVSKAVNKTKRKFMPNLHRHKFWVESENKYVTLTLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L + Sbjct: 61 KKG-IDVVLKEIRDR 74 >gi|307107886|gb|EFN56127.1| hypothetical protein CHLNCDRAFT_144754 [Chlorella variabilis] Length = 146 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R + V+SGN++S NKTRR + PN L S I+ + LR++ ALR ++ Sbjct: 16 ARRGLYAGRRVLSGNQISEDGGNKTRRTWKPNSHNKRLYSHILARMVPLRVTAAALRDID 75 Query: 61 RQGGLDRFLSNSKKENLSA 79 + GG+D ++ N+ + L + Sbjct: 76 KVGGIDAYILNTPDKQLQS 94 >gi|239918397|ref|YP_002957955.1| LSU ribosomal protein L28P [Micrococcus luteus NCTC 2665] gi|281415407|ref|ZP_06247149.1| 50S ribosomal protein L28 [Micrococcus luteus NCTC 2665] gi|289707032|ref|ZP_06503363.1| ribosomal protein L28 [Micrococcus luteus SK58] gi|259646745|sp|C5C6R3|RL28_MICLC RecName: Full=50S ribosomal protein L28 gi|239839604|gb|ACS31401.1| LSU ribosomal protein L28P [Micrococcus luteus NCTC 2665] gi|289556218|gb|EFD49578.1| ribosomal protein L28 [Micrococcus luteus SK58] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ +T+RRF PN+ + T + + L +S +++++ Sbjct: 1 MAAHCQVTGAGPGFGHSISHSHRRTKRRFDPNIQKKTYWVPSLRRNVTLTLSAKGIKTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G +D ++ +L A+ L Sbjct: 61 VRG-IDAVVA-----DLIAKGVKL 78 >gi|148245024|ref|YP_001219718.1| 50S ribosomal protein L28 [Candidatus Vesicomyosocius okutanii HA] gi|166228171|sp|A5CVN4|RL28_VESOH RecName: Full=50S ribosomal protein L28 gi|146326851|dbj|BAF61994.1| 50S ribosomal protein L28 [Candidatus Vesicomyosocius okutanii HA] Length = 82 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC +T K +SGN VSHANNKTRRRF PNL + + + +L++S R ++ Sbjct: 1 MAKVCMVTGKRPISGNNVSHANNKTRRRFYPNLHKHRFWVESENRFVKLKLSAKGFRIID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|262197734|ref|YP_003268943.1| ribosomal protein L28 [Haliangium ochraceum DSM 14365] gi|262081081|gb|ACY17050.1| ribosomal protein L28 [Haliangium ochraceum DSM 14365] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K + GNKVSH+N+KT+RRF NL + + +LR+S ++ ++ Sbjct: 1 MSRVCQVTGKKALVGNKVSHSNHKTKRRFEVNLHDKRFWLEEENRWVKLRVSARGMKIID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + + + AR + Sbjct: 61 KRG------LATVVKEMRARGEKI 78 >gi|256820965|ref|YP_003142244.1| 50S ribosomal protein L28 [Capnocytophaga ochracea DSM 7271] gi|315224164|ref|ZP_07866004.1| 50S ribosomal protein L28 [Capnocytophaga ochracea F0287] gi|256582548|gb|ACU93683.1| ribosomal protein L28 [Capnocytophaga ochracea DSM 7271] gi|314945897|gb|EFS97906.1| 50S ribosomal protein L28 [Capnocytophaga ochracea F0287] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC+LT K + GN VSHA NKT+R+F NL + L++S A+++++ Sbjct: 1 MARVCDLTGKKALVGNNVSHAMNKTKRKFNVNLRTKRFFIPEENRWITLKVSATAIKTID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|319442734|ref|ZP_07991890.1| 50S ribosomal protein L28 [Corynebacterium variabile DSM 44702] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + + L +S L++++ Sbjct: 1 MSAYCQVTGRKPGFGKSVSHSHRRTNRRWNPNIQRRSFYVPSEGRTITLNVSTKGLKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|9971882|gb|AAG10444.1|AF279106_6 predicted 50S ribosomal protein L28 [uncultured marine gamma proteobacterium EBAC31A08] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K SGN VSHA N+T+R+F PNL + + L++S +R ++ Sbjct: 1 MSKICQVTGKIPQSGNNVSHAKNRTKRKFFPNLHTHKFWVESENRFVNLKVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L + + Sbjct: 61 KKG-ISEVLKELRAK 74 >gi|302755644|ref|XP_002961246.1| hypothetical protein SELMODRAFT_71657 [Selaginella moellendorffii] gi|302772124|ref|XP_002969480.1| hypothetical protein SELMODRAFT_68550 [Selaginella moellendorffii] gi|300162956|gb|EFJ29568.1| hypothetical protein SELMODRAFT_68550 [Selaginella moellendorffii] gi|300172185|gb|EFJ38785.1| hypothetical protein SELMODRAFT_71657 [Selaginella moellendorffii] Length = 113 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 2 SRVCELTKKTVMSGNKVS-HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 ++ + + GNKVS NKTRR + PN+ L S +++ ++ ++ ALR ++ Sbjct: 7 AKRGIFAGRHIQFGNKVSEKGGNKTRRTWKPNVRLKRLYSFSLDRFIRVHVTTHALRCID 66 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 + GGLD +L N L + + L+ M Sbjct: 67 KAGGLDEYLLNKPDHKLENDLCLYWKRELQTM 98 >gi|296393677|ref|YP_003658561.1| 50S ribosomal protein L28 [Segniliparus rotundus DSM 44985] gi|296180824|gb|ADG97730.1| ribosomal protein L28 [Segniliparus rotundus DSM 44985] Length = 78 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + L +S +++++ Sbjct: 1 MSAHCQVTGRQPGFGMAVSHSHRRTNRRWNPNIQRRRYFLPSEGRTITLNVSTKGIKTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R+G + L A+ + Sbjct: 61 RKG------IEAVVAELRAKGVKV 78 >gi|237745385|ref|ZP_04575866.1| ribosomal protein L28 [Oxalobacter formigenes HOxBLS] gi|229378880|gb|EEO28971.1| ribosomal protein L28 [Oxalobacter formigenes HOxBLS] Length = 75 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 28/56 (50%), Positives = 36/56 (64%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCAL 56 M+RVC++T K MSGN VSHANNK+RRRF+PNL + + LR+S L Sbjct: 1 MARVCQVTGKKPMSGNTVSHANNKSRRRFMPNLHYRRFFVESENRWVSLRVSNAGL 56 >gi|326802522|ref|YP_004320341.1| 50S ribosomal protein L28 [Sphingobacterium sp. 21] gi|326553286|gb|ADZ81671.1| 50S ribosomal protein L28 [Sphingobacterium sp. 21] Length = 77 Score = 85.5 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C+LT K M+G VS++N KT+R+F PNL + L++S A++++ Sbjct: 1 MSRICDLTGKAAMNGYNVSNSNVKTKRKFYPNLQTKRFFIPEENRWITLKVSTSAIKTIN 60 Query: 61 RQGG---LDRFLSN 71 + G +++F+ Sbjct: 61 KNGITAVINKFIKK 74 >gi|327404678|ref|YP_004345516.1| 50S ribosomal protein L28P [Fluviicola taffensis DSM 16823] gi|327320186|gb|AEA44678.1| LSU ribosomal protein L28P [Fluviicola taffensis DSM 16823] Length = 78 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K+VM GN VSH+N KT+R+F PNL + L+IS ALR++ Sbjct: 1 MSRVCQLTGKSVMVGNNVSHSNRKTKRKFYPNLLTKKFYVPEDDMYVTLKISASALRTIN 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|229496123|ref|ZP_04389844.1| ribosomal protein L28 [Porphyromonas endodontalis ATCC 35406] gi|229316954|gb|EEN82866.1| ribosomal protein L28 [Porphyromonas endodontalis ATCC 35406] Length = 79 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++T K M GN VSH+N+KT+R F NL + +L++S LR + Sbjct: 1 MSKACQITGKRAMVGNNVSHSNHKTKRVFNVNLFEKKFYWPEQDCWIRLKVSADGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G L+ L + ++ Sbjct: 61 KIG-LNEALKRAAEK 74 >gi|109896379|ref|YP_659634.1| ribosomal protein L28 [Pseudoalteromonas atlantica T6c] gi|332304439|ref|YP_004432290.1| ribosomal protein L28 [Glaciecola agarilytica 4H-3-7+YE-5] gi|123171929|sp|Q15ZV8|RL28_PSEA6 RecName: Full=50S ribosomal protein L28 gi|109698660|gb|ABG38580.1| LSU ribosomal protein L28P [Pseudoalteromonas atlantica T6c] gi|332171768|gb|AEE21022.1| ribosomal protein L28 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 78 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K GN SHA N TRRRFLPNL + + +LR+S +R ++ Sbjct: 1 MSKVCIVTGKRPAVGNNRSHAKNSTRRRFLPNLQTHRFWVESENRFVKLRLSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L++ + Sbjct: 61 KKG-IDSVLTDIRAN 74 >gi|322709867|gb|EFZ01442.1| 50S ribosomal protein L24 [Metarhizium anisopliae ARSEF 23] Length = 292 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 11 TVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN V+ +N K+RR + PN+ T S + + + R++ L+++ R+GG++ +L Sbjct: 104 RIRFGNNVAEKHNNKSRRFWRPNVHVKTFFSPSLGARVKTRLTLRVLKTIRREGGIENYL 163 Query: 70 SN---SKKENLSARMRTLRSQILKKMSEKS 96 ++ L LR +++ + + Sbjct: 164 LKSKPARIRELGPGGWNLRWILMQTQAVQQ 193 >gi|314967206|gb|EFT11305.1| ribosomal protein L28 [Propionibacterium acnes HL082PA2] Length = 105 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++ GN VSH+ T+RR+ PN+ + + +K L ++ A++ ++ Sbjct: 1 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|317506812|ref|ZP_07964586.1| ribosomal protein L28 [Segniliparus rugosus ATCC BAA-974] gi|316254886|gb|EFV14182.1| ribosomal protein L28 [Segniliparus rugosus ATCC BAA-974] Length = 78 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + L +S +++++ Sbjct: 1 MSAHCQVTGRQPGFGMAVSHSHRRTNRRWNPNIQRRRYFLPSEGRTITLNVSAKGIKTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R+G + L A+ + Sbjct: 61 RKG------IETVVAELRAKGVKV 78 >gi|282862693|ref|ZP_06271754.1| ribosomal protein L28 [Streptomyces sp. ACTE] gi|282562379|gb|EFB67920.1| ribosomal protein L28 [Streptomyces sp. ACTE] Length = 78 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GN +SH++ +T RRF PN+ R + +L +S A+R+++ Sbjct: 1 MSAHCQLTGAQPGFGNHISHSHRRTSRRFDPNIQRKRYWLPSEGRHVRLTLSARAIRTID 60 Query: 61 RQG 63 G Sbjct: 61 TIG 63 >gi|319953947|ref|YP_004165214.1| lsu ribosomal protein l28p [Cellulophaga algicola DSM 14237] gi|319422607|gb|ADV49716.1| LSU ribosomal protein L28P [Cellulophaga algicola DSM 14237] Length = 78 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCE+T K M GN VS + NKTRRRF NL + + ++ L++S AL+S+ Sbjct: 1 MSKVCEITGKRAMFGNNVSFSINKTRRRFNVNLSKKRFYIEEEDRWVTLKVSARALKSIN 60 Query: 61 RQGGLDRFLSNSKKENLSA 79 ++G + L +K L+ Sbjct: 61 KKG-ISAVLKEAKANGLTK 78 >gi|182434338|ref|YP_001822057.1| putative 50S ribosomal protein L28 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462854|dbj|BAG17374.1| putative 50S ribosomal protein L28 [Streptomyces griseus subsp. griseus NBRC 13350] Length = 78 Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GN +SH++ +T RRF PN+ R + +L +S A+R+V+ Sbjct: 1 MSAHCQLTGSKPGFGNNISHSHRRTSRRFDPNVQRKRYWLPGEGRSVRLTLSARAIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|332534469|ref|ZP_08410308.1| 50S ribosomal protein L28 [Pseudoalteromonas haloplanktis ANT/505] gi|332036122|gb|EGI72598.1| 50S ribosomal protein L28 [Pseudoalteromonas haloplanktis ANT/505] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K GN SHA N TRRRFLPNL + ++ LR + +R ++ Sbjct: 1 MSKVCQVTGKRPAVGNHRSHARNATRRRFLPNLQTHRFWVESEKRFVTLRTTTKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D L+ + Sbjct: 61 KKG-IDTVLTEIRAR 74 >gi|332291042|ref|YP_004429651.1| ribosomal protein L28 [Krokinobacter diaphorus 4H-3-7-5] gi|332169128|gb|AEE18383.1| ribosomal protein L28 [Krokinobacter diaphorus 4H-3-7-5] Length = 79 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNVNLMKKRFYLPAEDKWITLKVSTSALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D + ++ Sbjct: 61 KKG-IDAVVKEARAN 74 >gi|169609064|ref|XP_001797951.1| hypothetical protein SNOG_07617 [Phaeosphaeria nodorum SN15] gi|111063963|gb|EAT85083.1| hypothetical protein SNOG_07617 [Phaeosphaeria nodorum SN15] Length = 470 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVS-HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN VS KTRR + PN+ L S +++K +LRI+ L++++R+GGLD +L Sbjct: 88 MIHFGNNVSEKTETKTRRDWKPNVLSKGLYSVALKKKIKLRITSRVLKTMDREGGLDEYL 147 Query: 70 SNS---KKENLSARMRTLRSQILKK 91 + + L LR +++K Sbjct: 148 LKDNEHRLKELGPLGWALRWTLMQK 172 >gi|325285397|ref|YP_004261187.1| 50S ribosomal protein L28 [Cellulophaga lytica DSM 7489] gi|324320851|gb|ADY28316.1| 50S ribosomal protein L28 [Cellulophaga lytica DSM 7489] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCE+T K M GN VS + NKTRRRF NL + ++ L++S AL+S+ Sbjct: 1 MSKVCEITGKKAMFGNNVSFSINKTRRRFDVNLSKKRFYIPEEDRWITLKVSTRALKSIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L +K + Sbjct: 61 KKG-ISEVLKEAKAQ 74 >gi|126661955|ref|ZP_01732954.1| 50S ribosomal protein L28 [Flavobacteria bacterium BAL38] gi|126625334|gb|EAZ96023.1| 50S ribosomal protein L28 [Flavobacteria bacterium BAL38] Length = 80 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L+IS AL+++ Sbjct: 1 MSRVCELTGKRAMVGNNVSHAMNKTKRKFSVNLVKKRFYIPEEDRWVTLKISTAALKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L N+K Sbjct: 61 KNG-IAAVLKNAKAN 74 >gi|305667749|ref|YP_003864036.1| 50S ribosomal protein L28 [Maribacter sp. HTCC2170] gi|88707586|gb|EAQ99828.1| 50S ribosomal protein L28 [Maribacter sp. HTCC2170] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCE+T K M GN VS + NKTRRRF NL + ++ L++S AL+S+ Sbjct: 1 MSKVCEITGKRAMFGNNVSFSINKTRRRFNVNLSKKRFYIPEEDRWVTLKVSAKALKSIN 60 Query: 61 RQGGLDRFLSNSKKENL 77 ++G + L +K + L Sbjct: 61 KKG-ISAVLKEAKAQGL 76 >gi|320012235|gb|ADW07085.1| ribosomal protein L28 [Streptomyces flavogriseus ATCC 33331] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GNK+SH++ +T RRF PN+ R + +L +S A+R+++ Sbjct: 1 MSAHCQLTGSRPGFGNKISHSHRRTPRRFDPNVQRKRYWLPGEGRYVRLTLSARAVRTID 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|325676326|ref|ZP_08156005.1| 50S ribosomal protein L28 [Rhodococcus equi ATCC 33707] gi|325552887|gb|EGD22570.1| 50S ribosomal protein L28 [Rhodococcus equi ATCC 33707] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ T ++ LR++ +R+++ Sbjct: 1 MSAHCQVTGRRPGFGRSVSHSHRRTNRRWNPNIQTKTYFLPGEGRRITLRVTPKGIRTID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|237785096|ref|YP_002905801.1| 50S ribosomal protein L28 [Corynebacterium kroppenstedtii DSM 44385] gi|259646731|sp|C4LHF3|RL28_CORK4 RecName: Full=50S ribosomal protein L28 gi|237758008|gb|ACR17258.1| 50S ribosomal protein L28 [Corynebacterium kroppenstedtii DSM 44385] Length = 78 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + + L +S L++++ Sbjct: 1 MSAYCQVTGRKPSFGKSVSHSHRRTNRRWNPNIQRRSFYLPSEGRTITLNVSTKGLKTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R G S L AR + Sbjct: 61 RYG------IESVVAKLRARGEKI 78 >gi|303283017|ref|XP_003060800.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458271|gb|EEH55569.1| predicted protein [Micromonas pusilla CCMP1545] Length = 208 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SAR 80 N +TRRR+ PN R L S+ +++ ++ ++ ALR +++ GGLD +L N+ + L S + Sbjct: 99 NPRTRRRWKPNAQRKRLYSEALDELVRVNVTTYALRWIDKAGGLDAYLLNTTPQKLMSYK 158 Query: 81 MRTLRSQILKKMSEKSS 97 LR ++L K S Sbjct: 159 ALELRKRVLDAKGIKES 175 >gi|86131782|ref|ZP_01050379.1| 50S ribosomal protein L28 [Dokdonia donghaensis MED134] gi|85817604|gb|EAQ38778.1| 50S ribosomal protein L28 [Dokdonia donghaensis MED134] Length = 79 Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNVNLMKKRFYLPAEDKWITLKVSASALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D + ++ Sbjct: 61 KKG-IDAVVKEARAN 74 >gi|219118234|ref|XP_002179896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408949|gb|EEC48882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 89 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 42/75 (56%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SR K V +GN VS + T+R F PN+ + S+I+++ + ++ LRS+++ Sbjct: 15 SRRGLYDGKDVRTGNNVSFSMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTSTLRSIDK 74 Query: 62 QGGLDRFLSNSKKEN 76 GGLD +L ++ + Sbjct: 75 AGGLDNYLLKNEYKE 89 >gi|268315599|ref|YP_003289318.1| 50S ribosomal protein L28 [Rhodothermus marinus DSM 4252] gi|262333133|gb|ACY46930.1| ribosomal protein L28 [Rhodothermus marinus DSM 4252] Length = 78 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT K +SG+ VSHANNKT+RRFLPNL + ++ LR+S ++++ Sbjct: 1 MARRDQLTGKGPVSGHNVSHANNKTKRRFLPNLQKKRFYIPEEKRWITLRVSAKTMKTIN 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|168025999|ref|XP_001765520.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683158|gb|EDQ69570.1| predicted protein [Physcomitrella patens subsp. patens] Length = 129 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SR C+LT K +G KVS +N++T+ PNL L + ++ +LRIS AL+++E+ Sbjct: 53 SRRCDLTGKKANNGYKVSFSNHRTKHLQQPNLQYKRLWWEEGKRFVKLRISTKALKTIEK 112 Query: 62 QG 63 G Sbjct: 113 NG 114 >gi|325103019|ref|YP_004272673.1| LSU ribosomal protein L28P [Pedobacter saltans DSM 12145] gi|324971867|gb|ADY50851.1| LSU ribosomal protein L28P [Pedobacter saltans DSM 12145] Length = 77 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C+LT K M G+ VSH+N KT R+F PNL ++ L++S A++++ Sbjct: 1 MSRICDLTGKAAMKGHHVSHSNVKTIRKFYPNLQLKKFYIPEEDRWITLKVSTSAIKTIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|328849475|gb|EGF98654.1| hypothetical protein MELLADRAFT_50935 [Melampsora larici-populina 98AG31] Length = 244 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 50/87 (57%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 V +G+ + + ++T+R + PN+ + +L S+++ Q QL+++ AL+++++ GGLDR+ Sbjct: 72 GLKVKAGDNIPKSKHRTKRVWNPNVQKSSLWSEVLNQSLQLKLTTAALKTIDKVGGLDRY 131 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEK 95 + + L +R ++ M K Sbjct: 132 VLQMSDQRLGGTGIRIRELVISAMKAK 158 >gi|322693338|gb|EFY85202.1| 50S ribosomal protein L24 [Metarhizium acridum CQMa 102] Length = 292 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 11 TVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN V+ +N K+RR + PN+ T S + + + R++ L+++ R+GG++ +L Sbjct: 104 RIRFGNNVAEKHNNKSRRFWRPNVHVKTFFSPSLGARVKTRLTLRVLKTIRREGGIENYL 163 Query: 70 SN---SKKENLSARMRTLRSQILKKMSEKS 96 ++ L LR +++ + + Sbjct: 164 LKSKPARIRELGPGGWNLRWILMQTQAVQQ 193 >gi|254777316|ref|ZP_05218832.1| ribosomal protein L28 [Mycobacterium avium subsp. avium ATCC 25291] Length = 78 Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ +T RR+ PN+ T ++ +LR+S ++ ++ Sbjct: 1 MSAHCQVTGRRPSFGNAVSHSHRRTPRRWSPNIQLKTYYLPSEGRRVRLRVSAKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|66812698|ref|XP_640528.1| hypothetical protein DDB_G0281601 [Dictyostelium discoideum AX4] gi|60468559|gb|EAL66562.1| hypothetical protein DDB_G0281601 [Dictyostelium discoideum AX4] Length = 142 Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 ++ K ++ ++ S + KTRR + PN+ T SD+++ ++ ++ +R +++ Sbjct: 20 AQRGLYGGKDIIFSDQSSFSTRKTRRTWKPNVQTKTYHSDVLDSNIRVSLTTYTIRCIDK 79 Query: 62 QGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 G D ++ ++K ++L S L+ + ++ +K+ Sbjct: 80 AGSFDNYIIHTKDKDLASELGSDLKVAMKHELQKKA 115 >gi|134097360|ref|YP_001103021.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] gi|291009081|ref|ZP_06567054.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] gi|133909983|emb|CAM00095.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] Length = 78 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T K G +VSH++ +T RR++PN+ R + +LR+S A+++++ Sbjct: 1 MSVRCQVTGKKPGYGKQVSHSHVRTNRRWMPNVQRRRYWLPSEGRWVRLRLSAKAMKTID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|29653643|ref|NP_819335.1| 50S ribosomal protein L28 [Coxiella burnetii RSA 493] gi|153208650|ref|ZP_01946902.1| ribosomal protein L28 [Coxiella burnetii 'MSU Goat Q177'] gi|154707613|ref|YP_001425122.1| 50S ribosomal protein L28 [Coxiella burnetii Dugway 5J108-111] gi|161830851|ref|YP_001596241.1| 50S ribosomal protein L28 [Coxiella burnetii RSA 331] gi|165919768|ref|ZP_02219511.1| ribosomal protein L28 [Coxiella burnetii RSA 334] gi|212213200|ref|YP_002304136.1| 50S ribosomal protein L28 [Coxiella burnetii CbuG_Q212] gi|212218126|ref|YP_002304913.1| 50S ribosomal protein L28 [Coxiella burnetii CbuK_Q154] gi|67461514|sp|Q83EM4|RL28_COXBU RecName: Full=50S ribosomal protein L28 gi|189042431|sp|A9KGS7|RL28_COXBN RecName: Full=50S ribosomal protein L28 gi|189042432|sp|A9NB26|RL28_COXBR RecName: Full=50S ribosomal protein L28 gi|226738060|sp|B6J5S6|RL28_COXB1 RecName: Full=50S ribosomal protein L28 gi|226738061|sp|B6J213|RL28_COXB2 RecName: Full=50S ribosomal protein L28 gi|29540905|gb|AAO89849.1| LSU ribosomal protein L28P [Coxiella burnetii RSA 493] gi|120575836|gb|EAX32460.1| ribosomal protein L28 [Coxiella burnetii 'MSU Goat Q177'] gi|154356899|gb|ABS78361.1| LSU ribosomal protein L28P [Coxiella burnetii Dugway 5J108-111] gi|161762718|gb|ABX78360.1| ribosomal protein L28 [Coxiella burnetii RSA 331] gi|165916851|gb|EDR35455.1| ribosomal protein L28 [Coxiella burnetii RSA 334] gi|212011610|gb|ACJ18991.1| LSU ribosomal protein L28P [Coxiella burnetii CbuG_Q212] gi|212012388|gb|ACJ19768.1| LSU ribosomal protein L28P [Coxiella burnetii CbuK_Q154] Length = 79 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K SGN VSHAN KT RRFLPNL + ++ L +S +R ++ Sbjct: 1 MAKVCQVTGKRPQSGNNVSHANKKTNRRFLPNLKKRRFWLPDEKRFITLTVSTHGMRIID 60 Query: 61 RQGGLDRFLSNSKKEN 76 + G ++ L ++ Sbjct: 61 KLG-INAVLKKIRERE 75 >gi|146302710|ref|YP_001197301.1| ribosomal protein L28 [Flavobacterium johnsoniae UW101] gi|189029440|sp|A5F9Z1|RL28_FLAJO RecName: Full=50S ribosomal protein L28 gi|146157128|gb|ABQ07982.1| LSU ribosomal protein L28P [Flavobacterium johnsoniae UW101] Length = 78 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K M GN VSHA NKT+R+F NL + ++ LR++ ++++ Sbjct: 1 MSRVCDLTGKRAMVGNNVSHAMNKTKRKFSVNLVKKRFYLPEEDRWITLRVAASTIKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L ++ E Sbjct: 61 KNG-ITAVLKKAQSE 74 >gi|312888453|ref|ZP_07748027.1| LSU ribosomal protein L28P [Mucilaginibacter paludis DSM 18603] gi|311299081|gb|EFQ76176.1| LSU ribosomal protein L28P [Mucilaginibacter paludis DSM 18603] Length = 77 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C+LT K M+G VS++N KT+RRF PNL ++ L++S A++++ Sbjct: 1 MSRICDLTGKGSMNGFNVSNSNVKTKRRFYPNLQTKKFYIPEEDKWITLKVSTAAIKTIS 60 Query: 61 RQG 63 + G Sbjct: 61 KNG 63 >gi|120436590|ref|YP_862276.1| 50S ribosomal protein L28 [Gramella forsetii KT0803] gi|166226577|sp|A0M3L4|RL28_GRAFK RecName: Full=50S ribosomal protein L28 gi|117578740|emb|CAL67209.1| 50S ribosomal protein L28 [Gramella forsetii KT0803] Length = 79 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++ AL+ + Sbjct: 1 MSRVCELTGKRAMVGNNVSHAMNKTKRKFNANLVKKRFFLPEEDRWVTLKVCTSALKDIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + + +K + Sbjct: 61 KKG-ISAVIKEAKAK 74 >gi|213966101|ref|ZP_03394289.1| conserved domain protein [Corynebacterium amycolatum SK46] gi|213951299|gb|EEB62693.1| conserved domain protein [Corynebacterium amycolatum SK46] Length = 135 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G VSH++ +T RR+ PN+ R + L +S L++++ Sbjct: 58 MSAICQVTGRKPSFGKTVSHSHRRTSRRWNPNVQRKKFYLASEGRHITLNVSPKGLKTID 117 Query: 61 RQGGLDRFLSNSKKE 75 + G ++ ++ + Sbjct: 118 KYG-IEAVVAQIRAR 131 >gi|184200006|ref|YP_001854213.1| 50S ribosomal protein L28 [Kocuria rhizophila DC2201] gi|226694951|sp|B2GG84|RL28_KOCRD RecName: Full=50S ribosomal protein L28 gi|183580236|dbj|BAG28707.1| 50S ribosomal protein L28 [Kocuria rhizophila DC2201] Length = 78 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ +T+RR+ PN+ + + + L +S ++ ++ Sbjct: 1 MAAHCQVTGAQPGFGHSISHSHRRTKRRWNPNIQKKRYWVPSLRRNVTLNLSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G +D + L AR + Sbjct: 61 ARG-IDAVV-----NELIARGEKI 78 >gi|68536621|ref|YP_251326.1| 50S ribosomal protein L28 [Corynebacterium jeikeium K411] gi|260577822|ref|ZP_05845756.1| 50S ribosomal protein L28 [Corynebacterium jeikeium ATCC 43734] gi|123650515|sp|Q4JTZ9|RL28_CORJK RecName: Full=50S ribosomal protein L28 gi|68264220|emb|CAI37708.1| 50S ribosomal protein L28 [Corynebacterium jeikeium K411] gi|258604049|gb|EEW17292.1| 50S ribosomal protein L28 [Corynebacterium jeikeium ATCC 43734] Length = 78 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R T + L +S L++++ Sbjct: 1 MSAYCQVTGRKPSFGKSVSHSHRRTNRRWNPNIQRRTFYLPSEGRSITLNVSTKGLKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|294505837|ref|YP_003569895.1| 50S Ribosomal protein L28 [Salinibacter ruber M8] gi|294342165|emb|CBH22943.1| 50S Ribosomal protein L28 [Salinibacter ruber M8] Length = 166 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R ++T + ++GN VS +N KT RRF NL ++ +L++S L+++ Sbjct: 89 MARKDDVTGEGPVTGNSVSDSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTIN 148 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L ++K+ Sbjct: 149 KKG-IQAVLEEARKQ 162 >gi|298209275|ref|YP_003717454.1| ribosomal protein L28 [Croceibacter atlanticus HTCC2559] gi|83849202|gb|EAP87071.1| ribosomal protein L28 [Croceibacter atlanticus HTCC2559] Length = 79 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L+IS AL+++ Sbjct: 1 MSRVCELTGKRAMVGNNVSHAMNKTKRKFNVNLIKKRFYIPEEDKWMTLKISTSALKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + + ++ + Sbjct: 61 KKG-ISAVIKEARAK 74 >gi|154492235|ref|ZP_02031861.1| hypothetical protein PARMER_01869 [Parabacteroides merdae ATCC 43184] gi|218261813|ref|ZP_03476528.1| hypothetical protein PRABACTJOHN_02199 [Parabacteroides johnsonii DSM 18315] gi|154087460|gb|EDN86505.1| hypothetical protein PARMER_01869 [Parabacteroides merdae ATCC 43184] gi|218223759|gb|EEC96409.1| hypothetical protein PRABACTJOHN_02199 [Parabacteroides johnsonii DSM 18315] Length = 79 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R+F NL + L IS LR++ Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRKFDVNLFTKKFYWVEQDCWVSLNISAAGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD + + ++ Sbjct: 61 KLG-LDAAIKKAAEK 74 >gi|118464773|ref|YP_883997.1| ribosomal protein L28 [Mycobacterium avium 104] gi|118166060|gb|ABK66957.1| ribosomal protein L28 [Mycobacterium avium 104] Length = 78 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ +T RR+ PN+ T ++ +LR+S ++ ++ Sbjct: 1 MSADCQVTGRRPSFGNAVSHSHRRTPRRWSPNIQLKTYYLPSEGRRIRLRVSAKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|29468214|gb|AAO85450.1| 50S ribosomal protein L28 Rpl28 [Pyrocystis lunula] Length = 81 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SR+C+LT K ++GN VSH+N KT+RRFLPNL + E+ L++S ALR++ + Sbjct: 1 SRICQLTGKRPITGNNVSHSNRKTKRRFLPNLFKKRFFIPETEEWVTLKVSSTALRNINK 60 Query: 62 QGGLDRFLSN 71 G + +L Sbjct: 61 LG-IYAYLKK 69 >gi|163787977|ref|ZP_02182423.1| uridine kinase [Flavobacteriales bacterium ALC-1] gi|159876297|gb|EDP70355.1| uridine kinase [Flavobacteriales bacterium ALC-1] Length = 78 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNANLVKKRFFIPEEDKWVTLKVSTSALKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L ++ + Sbjct: 61 KIG-ISAMLKEARAK 74 >gi|150025492|ref|YP_001296318.1| 50S ribosomal protein L28 [Flavobacterium psychrophilum JIP02/86] gi|166226571|sp|A6GZI6|RL28_FLAPJ RecName: Full=50S ribosomal protein L28 gi|149772033|emb|CAL43509.1| 50S ribosomal protein L28 [Flavobacterium psychrophilum JIP02/86] Length = 78 Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C+LT K M GN VSHA NKT+R+F NL + ++ LR++ ++++ Sbjct: 1 MSRICDLTGKRAMVGNNVSHAMNKTKRKFSVNLIKKRFYLPEEDRWITLRVAASTIKTIN 60 Query: 61 RQGGLDRFLSNS 72 + G + L + Sbjct: 61 KNG-ISAVLKKA 71 >gi|227539205|ref|ZP_03969254.1| ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33300] gi|300770679|ref|ZP_07080558.1| 50S ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33861] gi|227240887|gb|EEI90902.1| ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33300] gi|300763155|gb|EFK59972.1| 50S ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33861] Length = 77 Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C+LT KT ++G +VS++N KT+R+F PNL + L++S A++++ Sbjct: 1 MSRICDLTGKTALNGYRVSNSNAKTKRKFYPNLQTKRFFIPEENRWITLKVSTSAIKTIN 60 Query: 61 RQG 63 + G Sbjct: 61 KNG 63 >gi|307326225|ref|ZP_07605422.1| ribosomal protein L28 [Streptomyces violaceusniger Tu 4113] gi|306888168|gb|EFN19157.1| ribosomal protein L28 [Streptomyces violaceusniger Tu 4113] Length = 78 Score = 83.5 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT + G+ +SH++ +T+RRF PN+ + +L +S A+++V+ Sbjct: 1 MSAHCQLTGRQPGFGHHISHSHRRTKRRFDPNIQHKRYWLPSEGRHIRLTLSTKAIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 TIG 63 >gi|302540597|ref|ZP_07292939.1| ribosomal protein L28 [Streptomyces hygroscopicus ATCC 53653] gi|302458215|gb|EFL21308.1| ribosomal protein L28 [Streptomyces himastatinicus ATCC 53653] Length = 78 Score = 83.5 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT + GN VSH++ +T+RRF PN+ R + +L +S A+++V+ Sbjct: 1 MSAHCQLTGRRPGFGNHVSHSHRRTKRRFDPNIQRKRYWLPSEGRHVRLTLSARAVKTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|189200168|ref|XP_001936421.1| 50S ribosomal protein L24 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983520|gb|EDU49008.1| 50S ribosomal protein L24 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 488 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 10 KTVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K + GN VS KTRR + PN+ + +L S +++K +L ++K L+ ++R+GGLD + Sbjct: 91 KRIRFGNNVSKKTETKTRRNWKPNVLQKSLYSVALKKKIKLVLAKHILKIIDREGGLDEY 150 Query: 69 LSN---SKKENLSARMRTLRSQILKK 91 L ++ + L LR ++++ Sbjct: 151 LLKDSEARIKELGPMGWALRWTLMQR 176 >gi|332284893|ref|YP_004416804.1| 50S ribosomal protein L28 [Pusillimonas sp. T7-7] gi|330428846|gb|AEC20180.1| 50S ribosomal protein L28 [Pusillimonas sp. T7-7] Length = 66 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSHANNKT+RRFLPNL + + +LR+S ALR++++ G +D L++ Sbjct: 1 MVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSTSALRTIDKNG-IDSVLADM 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|220914458|ref|YP_002489767.1| 50S ribosomal protein L28 [Arthrobacter chlorophenolicus A6] gi|254801497|sp|B8H776|RL28_ARTCA RecName: Full=50S ribosomal protein L28 gi|219861336|gb|ACL41678.1| ribosomal protein L28 [Arthrobacter chlorophenolicus A6] Length = 78 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ + +RRF PN+ + + + L++S +++++ Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 RQGGLDRFLSN 71 +G +D +++ Sbjct: 61 VRG-IDAVVAS 70 >gi|296140972|ref|YP_003648215.1| ribosomal protein L28 [Tsukamurella paurometabola DSM 20162] gi|296029106|gb|ADG79876.1| ribosomal protein L28 [Tsukamurella paurometabola DSM 20162] Length = 78 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G +VSH++ +T RR+ PN+ R + + LR+S +++++ Sbjct: 1 MSAHCQVTGRAPGFGKRVSHSHVRTSRRWDPNIQRRRYYVPSLGRTVVLRVSAKGIKTID 60 Query: 61 RQGGLDRFLSN 71 R+G +D +++ Sbjct: 61 RRG-IDAVVAD 70 >gi|50955925|ref|YP_063213.1| 50S ribosomal protein L28 [Leifsonia xyli subsp. xyli str. CTCB07] gi|67461387|sp|Q6ABY4|RL28_LEIXX RecName: Full=50S ribosomal protein L28 gi|50952407|gb|AAT90108.1| 50S ribosomal protein L28 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 78 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++T T G+ +SH++ +T+RRF PN+ + T + + L +S ++ ++ Sbjct: 1 MAAVCQVTGATPGFGHSISHSHRRTKRRFDPNIQKKTYYVPSLRRNVTLTLSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G + ++L AR + Sbjct: 61 ARG------IEAVVKDLLARGEKI 78 >gi|163755937|ref|ZP_02163054.1| 50S ribosomal protein L28 [Kordia algicida OT-1] gi|161324108|gb|EDP95440.1| 50S ribosomal protein L28 [Kordia algicida OT-1] Length = 78 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRICELTGKKAMVGNNVSHAMNKTKRKFNANLTKKRFYIPEEDKWVTLKVSTSALKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L ++ + Sbjct: 61 KKG-ISAVLKEARAK 74 >gi|160872438|ref|ZP_02062570.1| conserved domain protein [Rickettsiella grylli] gi|159121237|gb|EDP46575.1| conserved domain protein [Rickettsiella grylli] Length = 82 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M G+ VSH+N KT+RRF NL L ++ +LRI+ LR +E Sbjct: 5 MARVCQVTGKKPMVGHNVSHSNRKTKRRFQINLHIRRLWVASEKRFVKLRITSQGLRIIE 64 Query: 61 RQGGLDRFLSNSKKE 75 + G +D L+ ++ Sbjct: 65 KLG-IDNVLATLRRR 78 >gi|219847552|ref|YP_002461985.1| 50S ribosomal protein L28 [Chloroflexus aggregans DSM 9485] gi|219541811|gb|ACL23549.1| ribosomal protein L28 [Chloroflexus aggregans DSM 9485] Length = 83 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+LT K G+ VS + +T RR+LPN+ + ++ +L++S ALR + Sbjct: 1 MARRCDLTGKGPSFGHHVSFSKRRTNRRWLPNVQTRRIWVPEEQRYVKLKLSAAALREIN 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLR 85 R+G L + L R TLR Sbjct: 61 RKG-----LLKA----LRDRGLTLR 76 >gi|28493080|ref|NP_787241.1| 50S ribosomal protein L28 [Tropheryma whipplei str. Twist] gi|28572288|ref|NP_789068.1| 50S ribosomal protein L28 [Tropheryma whipplei TW08/27] gi|67461516|sp|Q83GW8|RL28_TROWT RecName: Full=50S ribosomal protein L28 gi|67461518|sp|Q83IB6|RL28_TROW8 RecName: Full=50S ribosomal protein L28 gi|28410419|emb|CAD66805.1| 50s ribosomal protein L28 [Tropheryma whipplei TW08/27] gi|28476120|gb|AAO44210.1| 50S ribosomal protein L28 [Tropheryma whipplei str. Twist] Length = 78 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS VC++T + G VSH++ +T+RRF PN+ R T + ++ L +S LR ++ Sbjct: 1 MSSVCQVTGASPGFGYAVSHSHRRTKRRFDPNVRRRTFYVATLGRRVTLNVSVKGLRLID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G +D + +L + L Sbjct: 61 KRG-IDAVV-----RDLIKKGVKL 78 >gi|261416330|ref|YP_003250013.1| ribosomal protein L28 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372786|gb|ACX75531.1| ribosomal protein L28 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326400|gb|ADL25601.1| ribosomal protein L28 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 73 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CE+T K + GN VSH+N K + LPNL + ++ LR+S LR++ Sbjct: 1 MSRICEVTGKAGLVGNMVSHSNRKKLMKQLPNLQKKRFYIPEEDRWVTLRVSAAGLRTIN 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|150007342|ref|YP_001302085.1| 50S ribosomal protein L28 [Parabacteroides distasonis ATCC 8503] gi|256839632|ref|ZP_05545141.1| ribosomal protein L28 [Parabacteroides sp. D13] gi|262382084|ref|ZP_06075222.1| ribosomal protein L28 [Bacteroides sp. 2_1_33B] gi|298375329|ref|ZP_06985286.1| ribosomal protein L28 [Bacteroides sp. 3_1_19] gi|301310657|ref|ZP_07216596.1| ribosomal protein L28 [Bacteroides sp. 20_3] gi|166226594|sp|A6L9U9|RL28_PARD8 RecName: Full=50S ribosomal protein L28 gi|149935766|gb|ABR42463.1| ribosomal protein L28 [Parabacteroides distasonis ATCC 8503] gi|256738562|gb|EEU51887.1| ribosomal protein L28 [Parabacteroides sp. D13] gi|262297261|gb|EEY85191.1| ribosomal protein L28 [Bacteroides sp. 2_1_33B] gi|298267829|gb|EFI09485.1| ribosomal protein L28 [Bacteroides sp. 3_1_19] gi|300832231|gb|EFK62862.1| ribosomal protein L28 [Bacteroides sp. 20_3] Length = 79 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R+F NL + L IS LR++ Sbjct: 1 MSKICQITGKRAMVGNNVSHSKRRTKRKFNVNLFTKKFYWVEQDCWVSLNISAAGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD + + ++ Sbjct: 61 KLG-LDAAIKMAAEK 74 >gi|260063513|ref|YP_003196593.1| 50S ribosomal protein L28 [Robiginitalea biformata HTCC2501] gi|88782957|gb|EAR14131.1| 50S ribosomal protein L28 [Robiginitalea biformata HTCC2501] Length = 78 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCELT K GN VS + NKTRRRF NL + ++ L++S AL+++ Sbjct: 1 MSKVCELTGKRAQFGNNVSFSINKTRRRFDVNLSKKRFYIPEEDRWITLKVSARALKAIN 60 Query: 61 RQGGLDRFLSNSKKE 75 R+G + L +K++ Sbjct: 61 RKG-ISAVLKEAKQK 74 >gi|325965085|ref|YP_004242991.1| 50S ribosomal protein L28P [Arthrobacter phenanthrenivorans Sphe3] gi|323471172|gb|ADX74857.1| LSU ribosomal protein L28P [Arthrobacter phenanthrenivorans Sphe3] Length = 78 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ + +RRF PN+ + + + L++S +++++ Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 RQG 63 +G Sbjct: 61 VRG 63 >gi|239945969|ref|ZP_04697906.1| putative 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 15998] gi|239992438|ref|ZP_04713102.1| putative 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 11379] gi|291449424|ref|ZP_06588814.1| 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 15998] gi|291352371|gb|EFE79275.1| 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 15998] Length = 78 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GNK+SH++++T RRF PN+ R + +L +S A+R+V+ Sbjct: 1 MSAHCQLTGSKPGFGNKISHSHHRTSRRFDPNIQRKRYWLPGEGRYVRLTLSVRAIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|227487783|ref|ZP_03918099.1| 50S ribosomal protein L28 [Corynebacterium glucuronolyticum ATCC 51867] gi|227542424|ref|ZP_03972473.1| 50S ribosomal protein L28 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092285|gb|EEI27597.1| 50S ribosomal protein L28 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181622|gb|EEI62594.1| 50S ribosomal protein L28 [Corynebacterium glucuronolyticum ATCC 51866] Length = 78 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G VSH++ +T RR+ PN+ R + L +S L+ ++ Sbjct: 1 MSAICQVTGRKPGFGKSVSHSHRRTNRRWNPNIQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVARIRAR 74 >gi|170097237|ref|XP_001879838.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645241|gb|EDR09489.1| predicted protein [Laccaria bicolor S238N-H82] Length = 192 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 42/77 (54%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K GN V + +K+RR +LPN+ + + S + +++++ AL+++++ GGLD++ Sbjct: 28 GKNKQYGNNVPFSKHKSRRTWLPNVQQKRIPSATLGMPIRVKLTTRALKTIKKHGGLDKY 87 Query: 69 LSNSKKENLSARMRTLR 85 + + L LR Sbjct: 88 VEKTPAVLLGHEGMRLR 104 >gi|116672463|ref|YP_833396.1| 50S ribosomal protein L28 [Arthrobacter sp. FB24] gi|166226539|sp|A0K1X6|RL28_ARTS2 RecName: Full=50S ribosomal protein L28 gi|116612572|gb|ABK05296.1| LSU ribosomal protein L28P [Arthrobacter sp. FB24] Length = 78 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ + +RRF PN+ + + + L++S +++++ Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 RQG 63 +G Sbjct: 61 VRG 63 >gi|328886753|emb|CCA59992.1| LSU ribosomal protein L28p [Streptomyces venezuelae ATCC 10712] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT G+ +SH++ ++ RRF PN+ + +L +S A+++V+ Sbjct: 1 MSAHCQLTGAKPGFGHTISHSHRRSPRRFDPNIQHKRYWLPSEGRHVRLTLSARAIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|320167558|gb|EFW44457.1| hypothetical protein CAOG_02482 [Capsaspora owczarzaki ATCC 30864] Length = 640 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + GN++SH++ KTRRR+LPN+ T ++++ +L + A R+++ GG++R+ Sbjct: 24 GVRIGYGNQISHSHRKTRRRWLPNVHLRTPYLSLLDKHVRLNTTSKATRTIDLAGGIERY 83 Query: 69 LSN-SKKENLSARMRTLRSQILKK 91 L N + + S R LR+Q+ ++ Sbjct: 84 LLNLNPERVASKRGDELRAQLRQR 107 >gi|326336203|ref|ZP_08202375.1| 50S ribosomal protein L28 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691712|gb|EGD33679.1| 50S ribosomal protein L28 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 100 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VCELT K M GN VSHA NKT+R+F NL ++ LR+S A++++ Sbjct: 23 MAQVCELTGKKAMGGNNVSHAMNKTKRKFKANLTTKRFYIPEEDRWITLRVSTSAIKTIN 82 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L +KK+ Sbjct: 83 KKG-ITAVLKEAKKQ 96 >gi|288924981|ref|ZP_06418917.1| 50S ribosomal protein L28 [Prevotella buccae D17] gi|315608015|ref|ZP_07883008.1| 50S ribosomal protein L28 [Prevotella buccae ATCC 33574] gi|288338171|gb|EFC76521.1| 50S ribosomal protein L28 [Prevotella buccae D17] gi|315250484|gb|EFU30480.1| 50S ribosomal protein L28 [Prevotella buccae ATCC 33574] Length = 94 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKVCQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFFWVEENCWITLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 + G LD + + + + ++ + K++E Sbjct: 61 KIG-LDAAIKQAVAKGYLSEIKVIAEANSAKVAEA 94 >gi|332521173|ref|ZP_08397631.1| ribosomal protein L28 [Lacinutrix algicola 5H-3-7-4] gi|332043266|gb|EGI79463.1| ribosomal protein L28 [Lacinutrix algicola 5H-3-7-4] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNANLIKKRFFLPEEDKWITLKVSTSALKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G + L +++ + Sbjct: 61 KIG-IAAALKDARAK 74 >gi|296128027|ref|YP_003635277.1| ribosomal protein L28 [Cellulomonas flavigena DSM 20109] gi|296019842|gb|ADG73078.1| ribosomal protein L28 [Cellulomonas flavigena DSM 20109] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++ K G VSH+ +T RRF+PN+ R + + +LR+S ++ ++ Sbjct: 1 MSNHCQVLGKAPTFGRTVSHSGRRTPRRFVPNIQRRRYWVPSLGRHVRLRVSTDGIKVID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|302562726|ref|ZP_07315068.1| ribosomal protein L28 [Streptomyces griseoflavus Tu4000] gi|302480344|gb|EFL43437.1| ribosomal protein L28 [Streptomyces griseoflavus Tu4000] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GN +SH++ +T RRF PN+ R + +L +S A+++V+ Sbjct: 1 MSAHCQLTGAQPGFGNTISHSHRRTSRRFDPNIQRKRYWLPSEGRHVRLTLSAKAIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|260912087|ref|ZP_05918645.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 472 str. F0295] gi|288928193|ref|ZP_06422040.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 317 str. F0108] gi|260633785|gb|EEX51917.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 472 str. F0295] gi|288331027|gb|EFC69611.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 317 str. F0108] Length = 87 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAMVGNNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|149371253|ref|ZP_01890739.1| 50S ribosomal protein L28 [unidentified eubacterium SCB49] gi|149355391|gb|EDM43950.1| 50S ribosomal protein L28 [unidentified eubacterium SCB49] Length = 79 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ LR+S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNVNLMKKRFYIPEEDKWITLRVSTSALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + + ++ Sbjct: 61 KKG-ISAVIKEARAN 74 >gi|163848340|ref|YP_001636384.1| 50S ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl] gi|222526259|ref|YP_002570730.1| 50S ribosomal protein L28 [Chloroflexus sp. Y-400-fl] gi|163669629|gb|ABY35995.1| ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl] gi|222450138|gb|ACM54404.1| ribosomal protein L28 [Chloroflexus sp. Y-400-fl] Length = 84 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT ++ G VS + +T RR+LPN+ + + ++ +L++S ALR +E Sbjct: 1 MSRRCDLTGRSPSFGYNVSFSKRRTNRRWLPNVQKRRIWVPEEQRFVRLKLSAAALREIE 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTLR 85 R+G L + L R TL+ Sbjct: 61 RKG-----LLQA----LRDRGLTLK 76 >gi|300932567|ref|ZP_07147823.1| 50S ribosomal protein L28 [Corynebacterium resistens DSM 45100] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + + L +S L++++ Sbjct: 1 MSAHCQVTGREPKFGKTVSHSHRRTSRRWNPNIQRRSFYLPSEGRTITLNVSTKGLKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|313793640|gb|EFS41671.1| ribosomal protein L28 [Propionibacterium acnes HL110PA1] gi|327455973|gb|EGF02628.1| ribosomal protein L28 [Propionibacterium acnes HL092PA1] Length = 78 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++ GN VSH+ T+RR+ PN+ + + +K L ++ A++ ++ Sbjct: 1 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPQAIKEID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|282878495|ref|ZP_06287278.1| ribosomal protein L28 [Prevotella buccalis ATCC 35310] gi|281299383|gb|EFA91769.1| ribosomal protein L28 [Prevotella buccalis ATCC 35310] Length = 87 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K GN VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGNNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNS 72 + G LD L + Sbjct: 61 KVG-LDAALKKA 71 >gi|163841607|ref|YP_001626012.1| 50S ribosomal protein L28P [Renibacterium salmoninarum ATCC 33209] gi|162955083|gb|ABY24598.1| LSU ribosomal protein L28P [Renibacterium salmoninarum ATCC 33209] Length = 114 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ + +RRF PN+ + + + L++S +++++ Sbjct: 37 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 96 Query: 61 RQGGLDRFL 69 +G +D + Sbjct: 97 VRG-IDAVV 104 >gi|313159483|gb|EFR58846.1| ribosomal protein L28 [Alistipes sp. HGB5] Length = 77 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +VCE+T K + GN VSH+++KT+R+F PNL S+ + L++S ++++ ++ Sbjct: 2 KVCEITGKVAIVGNNVSHSHHKTKRKFSPNLKTKRFWSEQEGRWITLKVSAAGMKTINKK 61 Query: 63 G 63 G Sbjct: 62 G 62 >gi|255327425|ref|ZP_05368499.1| ribosomal protein L28 [Rothia mucilaginosa ATCC 25296] gi|283458733|ref|YP_003363371.1| 50S ribosomal protein L28 [Rothia mucilaginosa DY-18] gi|300743694|ref|ZP_07072714.1| ribosomal protein L28 [Rothia dentocariosa M567] gi|311112945|ref|YP_003984167.1| 50S ribosomal protein L28 [Rothia dentocariosa ATCC 17931] gi|255295705|gb|EET75048.1| ribosomal protein L28 [Rothia mucilaginosa ATCC 25296] gi|283134786|dbj|BAI65551.1| ribosomal protein L28 [Rothia mucilaginosa DY-18] gi|300380055|gb|EFJ76618.1| ribosomal protein L28 [Rothia dentocariosa M567] gi|310944439|gb|ADP40733.1| 50S ribosomal protein L28 [Rothia dentocariosa ATCC 17931] Length = 78 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++T G+ +SH++ + +RRF PN+ + T + +K L +S ++ ++ Sbjct: 1 MAAVCQVTGAVPGFGHSISHSHRRNKRRFDPNVQKKTYWVPSLRRKVTLNVSAKGIKVID 60 Query: 61 RQGGLDRFLSN 71 +G +D ++ Sbjct: 61 ARG-IDAVVAE 70 >gi|300776246|ref|ZP_07086104.1| 50S ribosomal protein L28 [Chryseobacterium gleum ATCC 35910] gi|300501756|gb|EFK32896.1| 50S ribosomal protein L28 [Chryseobacterium gleum ATCC 35910] Length = 80 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNKT+RRF NL ++ L++S LR + Sbjct: 1 MSRICQITGKRAMVGNNVSHANNKTKRRFEINLLEKKFYLPEQDKHVTLKVSAHGLRVIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|254796704|ref|YP_003081540.1| ribosomal protein L28 [Neorickettsia risticii str. Illinois] gi|254589934|gb|ACT69296.1| ribosomal protein L28 [Neorickettsia risticii str. Illinois] Length = 86 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 57/76 (75%) Query: 18 VSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL 77 VSH+N KT++RF+PNL RIT+ SD+++QK++ ++S +R+V+ +GGLD FL N+K L Sbjct: 2 VSHSNRKTKKRFMPNLQRITVFSDVLKQKFRFKVSAKTIRTVDFKGGLDDFLRNTKNSKL 61 Query: 78 SARMRTLRSQILKKMS 93 S L+ +I+KK+S Sbjct: 62 SKSALALKKRIMKKVS 77 >gi|333030358|ref|ZP_08458419.1| 50S ribosomal protein L28 [Bacteroides coprosuis DSM 18011] gi|332740955|gb|EGJ71437.1| 50S ribosomal protein L28 [Bacteroides coprosuis DSM 18011] Length = 86 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T++ F NL L IS LR++ Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKKTFDVNLFNKKFYYVEQGCWISLSISAAGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KIG-LDAALHEAVDK 74 >gi|330995105|ref|ZP_08319022.1| ribosomal protein L28 [Paraprevotella xylaniphila YIT 11841] gi|329576681|gb|EGG58184.1| ribosomal protein L28 [Paraprevotella xylaniphila YIT 11841] Length = 86 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+RRF NL + L+IS LR + Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRRFDVNLFTKKFYYVEQDCWISLKISAAGLRYIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L+N+ ++ Sbjct: 61 KVG-LDAALANAVEK 74 >gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202] gi|282854930|ref|ZP_06264264.1| ribosomal protein L28 [Propionibacterium acnes J139] gi|289426052|ref|ZP_06427799.1| ribosomal protein L28 [Propionibacterium acnes SK187] gi|295131679|ref|YP_003582342.1| ribosomal protein L28 [Propionibacterium acnes SK137] gi|67461385|sp|Q6A5U8|RL28_PROAC RecName: Full=50S ribosomal protein L28 gi|50841198|gb|AAT83865.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202] gi|282582076|gb|EFB87459.1| ribosomal protein L28 [Propionibacterium acnes J139] gi|289153595|gb|EFD02309.1| ribosomal protein L28 [Propionibacterium acnes SK187] gi|291376781|gb|ADE00636.1| ribosomal protein L28 [Propionibacterium acnes SK137] gi|313765615|gb|EFS36979.1| ribosomal protein L28 [Propionibacterium acnes HL013PA1] gi|313771824|gb|EFS37790.1| ribosomal protein L28 [Propionibacterium acnes HL074PA1] gi|313802950|gb|EFS44161.1| ribosomal protein L28 [Propionibacterium acnes HL110PA2] gi|313810684|gb|EFS48398.1| ribosomal protein L28 [Propionibacterium acnes HL083PA1] gi|313813722|gb|EFS51436.1| ribosomal protein L28 [Propionibacterium acnes HL025PA1] gi|313816596|gb|EFS54310.1| ribosomal protein L28 [Propionibacterium acnes HL059PA1] gi|313829673|gb|EFS67387.1| ribosomal protein L28 [Propionibacterium acnes HL063PA2] gi|313831494|gb|EFS69208.1| ribosomal protein L28 [Propionibacterium acnes HL007PA1] gi|313833456|gb|EFS71170.1| ribosomal protein L28 [Propionibacterium acnes HL056PA1] gi|313839416|gb|EFS77130.1| ribosomal protein L28 [Propionibacterium acnes HL086PA1] gi|314916637|gb|EFS80468.1| ribosomal protein L28 [Propionibacterium acnes HL005PA4] gi|314918904|gb|EFS82735.1| ribosomal protein L28 [Propionibacterium acnes HL050PA1] gi|314920915|gb|EFS84746.1| ribosomal protein L28 [Propionibacterium acnes HL050PA3] gi|314924411|gb|EFS88242.1| ribosomal protein L28 [Propionibacterium acnes HL001PA1] gi|314931407|gb|EFS95238.1| ribosomal protein L28 [Propionibacterium acnes HL067PA1] gi|314956634|gb|EFT00886.1| ribosomal protein L28 [Propionibacterium acnes HL027PA1] gi|314959514|gb|EFT03616.1| ribosomal protein L28 [Propionibacterium acnes HL002PA1] gi|314964710|gb|EFT08810.1| ribosomal protein L28 [Propionibacterium acnes HL082PA1] gi|314968886|gb|EFT12984.1| ribosomal protein L28 [Propionibacterium acnes HL037PA1] gi|314974811|gb|EFT18906.1| ribosomal protein L28 [Propionibacterium acnes HL053PA1] gi|314977862|gb|EFT21956.1| ribosomal protein L28 [Propionibacterium acnes HL045PA1] gi|314981661|gb|EFT25754.1| ribosomal protein L28 [Propionibacterium acnes HL110PA3] gi|314984728|gb|EFT28820.1| ribosomal protein L28 [Propionibacterium acnes HL005PA1] gi|315079353|gb|EFT51354.1| ribosomal protein L28 [Propionibacterium acnes HL053PA2] gi|315082404|gb|EFT54380.1| ribosomal protein L28 [Propionibacterium acnes HL078PA1] gi|315092300|gb|EFT64276.1| ribosomal protein L28 [Propionibacterium acnes HL110PA4] gi|315095631|gb|EFT67607.1| ribosomal protein L28 [Propionibacterium acnes HL038PA1] gi|315100282|gb|EFT72258.1| ribosomal protein L28 [Propionibacterium acnes HL059PA2] gi|315102421|gb|EFT74397.1| ribosomal protein L28 [Propionibacterium acnes HL046PA1] gi|315104670|gb|EFT76646.1| ribosomal protein L28 [Propionibacterium acnes HL050PA2] gi|315107723|gb|EFT79699.1| ribosomal protein L28 [Propionibacterium acnes HL030PA1] gi|327332918|gb|EGE74650.1| ribosomal protein L28 [Propionibacterium acnes HL096PA2] gi|327335323|gb|EGE77033.1| ribosomal protein L28 [Propionibacterium acnes HL097PA1] gi|327448621|gb|EGE95275.1| ribosomal protein L28 [Propionibacterium acnes HL043PA1] gi|327451152|gb|EGE97806.1| ribosomal protein L28 [Propionibacterium acnes HL043PA2] gi|327455738|gb|EGF02393.1| ribosomal protein L28 [Propionibacterium acnes HL087PA3] gi|327458087|gb|EGF04742.1| ribosomal protein L28 [Propionibacterium acnes HL083PA2] gi|328757247|gb|EGF70863.1| ribosomal protein L28 [Propionibacterium acnes HL087PA1] gi|328757633|gb|EGF71249.1| ribosomal protein L28 [Propionibacterium acnes HL025PA2] gi|328761968|gb|EGF75475.1| ribosomal protein L28 [Propionibacterium acnes HL099PA1] Length = 78 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++ GN VSH+ T+RR+ PN+ + + +K L ++ A++ ++ Sbjct: 1 MSRRCQVRGTKPEFGNNVSHSQRHTKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|19552095|ref|NP_600097.1| 50S ribosomal protein L28 [Corynebacterium glutamicum ATCC 13032] gi|62389758|ref|YP_225160.1| 50S ribosomal protein L28 [Corynebacterium glutamicum ATCC 13032] gi|145295039|ref|YP_001137860.1| 50S ribosomal protein L28 [Corynebacterium glutamicum R] gi|23822039|sp|Q8NS15|RL28_CORGL RecName: Full=50S ribosomal protein L28 gi|166226568|sp|A4QCL1|RL28_CORGB RecName: Full=50S ribosomal protein L28 gi|21323635|dbj|BAB98262.1| Ribosomal protein L28 [Corynebacterium glutamicum ATCC 13032] gi|41325093|emb|CAF19574.1| 50S RIBOSOMAL PROTEIN L28 [Corynebacterium glutamicum ATCC 13032] gi|140844959|dbj|BAF53958.1| hypothetical protein [Corynebacterium glutamicum R] Length = 78 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + L +S L+ ++ Sbjct: 1 MSAHCQVTGRKPSFGKSVSHSHRRTSRRWNPNVQRRKFYVPSEGRTITLTVSTKGLKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVAQIRAR 74 >gi|255536299|ref|YP_003096670.1| LSU ribosomal protein L28p [Flavobacteriaceae bacterium 3519-10] gi|255342495|gb|ACU08608.1| LSU ribosomal protein L28p [Flavobacteriaceae bacterium 3519-10] Length = 95 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNKT+RRF NL E+ L++S LR + Sbjct: 15 MSRICQITGKRAMVGNNVSHANNKTKRRFEINLLEKKFYLPEQEKSVTLKVSAHGLRIIN 74 Query: 61 RQG 63 + G Sbjct: 75 KVG 77 >gi|326774850|ref|ZP_08234115.1| ribosomal protein L28 [Streptomyces cf. griseus XylebKG-1] gi|326655183|gb|EGE40029.1| ribosomal protein L28 [Streptomyces cf. griseus XylebKG-1] Length = 78 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+L GN +SH++ +T RRF PN+ R + +L +S A+R+V+ Sbjct: 1 MSAHCQLAGSKPGFGNNISHSHRRTSRRFDPNVQRKRYWLPGEGRSVRLTLSARAIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|325003295|ref|ZP_08124407.1| 50S ribosomal protein L28 [Pseudonocardia sp. P1] Length = 78 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT + G VSH++ +T RR+ PN+ + +L +S +++V+ Sbjct: 1 MSRRCDLTGREPSFGKAVSHSHRRTSRRWDPNVQSKRYWFADEGRWVRLSLSAKGIKTVD 60 Query: 61 RQG 63 R G Sbjct: 61 RIG 63 >gi|313140599|ref|ZP_07802792.1| 50S ribosomal protein L28-2 [Bifidobacterium bifidum NCIMB 41171] gi|313133109|gb|EFR50726.1| 50S ribosomal protein L28-2 [Bifidobacterium bifidum NCIMB 41171] Length = 98 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ +GN+VSH++ KTRRRF PNL + + L +S +++++ Sbjct: 1 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 60 Query: 61 RQG 63 R G Sbjct: 61 RIG 63 >gi|302868521|ref|YP_003837158.1| 50S ribosomal protein L28 [Micromonospora aurantiaca ATCC 27029] gi|302571380|gb|ADL47582.1| ribosomal protein L28 [Micromonospora aurantiaca ATCC 27029] Length = 78 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN VSH++ +TRRR+ PNL + +L ++ AL++V+ Sbjct: 1 MSRRCDVTGAKPSFGNAVSHSHRRTRRRWNPNLQNHRFWLPSERRWVRLNLTAKALKTVD 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|296118268|ref|ZP_06836849.1| ribosomal protein L28 [Corynebacterium ammoniagenes DSM 20306] gi|295968826|gb|EFG82070.1| ribosomal protein L28 [Corynebacterium ammoniagenes DSM 20306] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G +VSH++ +T RR+ PN+ R + L +S ++ ++ Sbjct: 1 MSAICQVTGREPSFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGIKIID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|295835223|ref|ZP_06822156.1| ribosomal protein L28 [Streptomyces sp. SPB74] gi|197698184|gb|EDY45117.1| ribosomal protein L28 [Streptomyces sp. SPB74] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GNKVSH++ +T RRF PN+ R + +L +S +++V+ Sbjct: 1 MSAHCQLTGSKPAFGNKVSHSHRRTPRRFDPNIQRKRYWLPSEGRYVRLVLSAKGIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|238882178|gb|EEQ45816.1| conserved hypothetical protein [Candida albicans WO-1] Length = 265 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S NKT R PN L S+ + ++ +LR++ L+++ ++GGLD++L ++ + Sbjct: 104 SEYLNKTLRAHRPNAQWTKLWSETLNRRLRLRVATRVLKTISKEGGLDQYLLKSTPARVK 163 Query: 76 NLSARMRTLRSQILKKMSEKS 96 + + LR +IL++ +K Sbjct: 164 TMGLKAWQLRYRILQEREQKQ 184 >gi|332879563|ref|ZP_08447258.1| ribosomal protein L28 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682529|gb|EGJ55431.1| ribosomal protein L28 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 86 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+RRF NL + L IS LR + Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRRFNVNLFTKKFYYVEQDCWISLNISAAGLRYIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L+++ + Sbjct: 61 KVG-LDAALASAVAK 74 >gi|282880709|ref|ZP_06289411.1| ribosomal protein L28 [Prevotella timonensis CRIS 5C-B1] gi|281305435|gb|EFA97493.1| ribosomal protein L28 [Prevotella timonensis CRIS 5C-B1] Length = 87 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K GN VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGNNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|188579179|ref|YP_001916108.1| ribosomal protein L28 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523631|gb|ACD61576.1| ribosomal protein L28 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 72 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K V +GN VSHANN+TRRRFLPNL + +LR+S ALR++++ G +D Sbjct: 3 GKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNG-IDAV 61 Query: 69 LSNSKKENLSARMRTL 84 L + L AR + Sbjct: 62 L-----KELRARGEKV 72 >gi|228474070|ref|ZP_04058811.1| ribosomal protein L28 [Capnocytophaga gingivalis ATCC 33624] gi|228274584|gb|EEK13425.1| ribosomal protein L28 [Capnocytophaga gingivalis ATCC 33624] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VCELT K M GN VSHA NKT+R+F NL ++ LR+S A++++ Sbjct: 1 MAQVCELTGKKAMGGNNVSHAMNKTKRKFKVNLTTKRFYIPEEDRWITLRVSTNAIKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L +KK+ Sbjct: 61 KKG-ISAVLKEAKKQ 74 >gi|161353680|ref|NP_627635.2| 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)] gi|14195690|sp|Q9X8K8|RL28B_STRCO RecName: Full=50S ribosomal protein L28-2 Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C LT GN++SH++ +T RRF PN+ + +LR+S +R+V+ Sbjct: 1 MSAHCMLTGARPGFGNRISHSHRRTSRRFDPNIQTKRYWLPSENRHVRLRLSTKGIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|313206700|ref|YP_004045877.1| LSU ribosomal protein l28p [Riemerella anatipestifer DSM 15868] gi|312446016|gb|ADQ82371.1| LSU ribosomal protein L28P [Riemerella anatipestifer DSM 15868] gi|315023767|gb|EFT36769.1| LSU ribosomal protein L28p [Riemerella anatipestifer RA-YM] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNKT+RRF NL E+ L++S LR + Sbjct: 1 MSRICQITGKRAMVGNHVSHANNKTKRRFEINLLEKKFYLPEQEKHITLKVSAHGLRVIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|94676711|ref|YP_588640.1| ribosomal protein L28 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166226545|sp|Q1LTS4|RL28_BAUCH RecName: Full=50S ribosomal protein L28 gi|94219861|gb|ABF14020.1| ribosomal protein L28 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 75 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K +SGN S+A N T+RRFLPNL + ++ ++R+S +R ++ Sbjct: 1 MSRFCQVTGKRSVSGNNRSYAMNATKRRFLPNLHFHRFWIEAEKRFIKIRVSAKGMRVID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|54026949|ref|YP_121191.1| 50S ribosomal protein L28 [Nocardia farcinica IFM 10152] gi|67461561|sp|Q5YPR4|RL282_NOCFA RecName: Full=50S ribosomal protein L28 2 gi|54018457|dbj|BAD59827.1| putative ribosomal protein L28 [Nocardia farcinica IFM 10152] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R T ++ L +S +++++ Sbjct: 1 MSAHCQVTGRKPGFGKSVSHSHVRTNRRWDPNIQRKTYYLPSEGRRITLTVSAKGIKTID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 R G + L AR + Sbjct: 61 RDG------IEAVVARLRARGEKI 78 >gi|167753007|ref|ZP_02425134.1| hypothetical protein ALIPUT_01271 [Alistipes putredinis DSM 17216] gi|167659321|gb|EDS03451.1| hypothetical protein ALIPUT_01271 [Alistipes putredinis DSM 17216] Length = 77 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +VCE+T K + GN VSH+++KT+R+F PNL S+ + L++S ++++ ++ Sbjct: 2 KVCEITGKVAVIGNNVSHSHHKTKRKFSPNLKNKRFWSEEEGRWITLKVSAAGIKTINKK 61 Query: 63 G 63 G Sbjct: 62 G 62 >gi|89076359|ref|ZP_01162692.1| putative ribosomal protein L28 [Photobacterium sp. SKA34] gi|89047930|gb|EAR53521.1| putative ribosomal protein L28 [Photobacterium sp. SKA34] Length = 75 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 VC++T K ++GN SHA N T+RRFLPNL + ++ +LR+S +R ++++G Sbjct: 1 VCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLSAKGMRIIDKKG 60 Query: 64 GLDRFLSNSKKE 75 +D L + Sbjct: 61 -IDVVLGEMRAR 71 >gi|68469645|ref|XP_721074.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida albicans SC5314] gi|68469884|ref|XP_720952.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida albicans SC5314] gi|46442846|gb|EAL02132.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida albicans SC5314] gi|46442975|gb|EAL02260.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida albicans SC5314] Length = 265 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S NKT R PN L S+ + ++ +LR++ L+++ ++GGLD++L ++ + Sbjct: 104 SEYLNKTLRAHRPNAQWTKLWSETLNRRLRLRVATRVLKTISKEGGLDQYLLKSTPARVK 163 Query: 76 NLSARMRTLRSQILKKMSEKS 96 + + LR +IL++ +K Sbjct: 164 TMGLKAWQLRYRILQEREQKQ 184 >gi|227504195|ref|ZP_03934244.1| 50S ribosomal protein L28 [Corynebacterium striatum ATCC 6940] gi|227199239|gb|EEI79287.1| 50S ribosomal protein L28 [Corynebacterium striatum ATCC 6940] Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G +VSH++ +T RR+ PN+ R + L +S ++ ++ Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGIKIID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|293339967|ref|XP_001061401.2| PREDICTED: mitochondrial ribosomal protein L28-like [Rattus norvegicus] gi|293351387|ref|XP_573060.3| PREDICTED: mitochondrial ribosomal protein L28 [Rattus norvegicus] gi|149052177|gb|EDM03994.1| similar to 39S ribosomal protein L28, mitochondrial precursor (L28mt) (MRP-L28) [Rattus norvegicus] Length = 257 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHAN---NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + ++ G + ++ + N+ ++ + P L L S+I+++K+ + ++ L ++ Sbjct: 80 WGGEGLILGYRYANNDKLSNRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDLIDEAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + +E+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPEEDLCSKFGMDLKRGMLLRLARQ 172 >gi|256786964|ref|ZP_05525395.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] gi|289770857|ref|ZP_06530235.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] gi|289701056|gb|EFD68485.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] Length = 78 Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C LT GN++SH++ +T RRF PN+ + +LR+S +R+V+ Sbjct: 1 MSAHCMLTGARPGFGNRISHSHRRTSRRFDPNIQTRRYWLPSENRHVRLRLSTKGIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|293606876|ref|ZP_06689224.1| 50S ribosomal protein L28 [Achromobacter piechaudii ATCC 43553] gi|292814728|gb|EFF73861.1| 50S ribosomal protein L28 [Achromobacter piechaudii ATCC 43553] Length = 66 Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSHANNKT+RRFLPNL + + +LR+S A+R++++ G +D L+ Sbjct: 1 MVGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDKNG-IDAVLAEM 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|25027499|ref|NP_737553.1| 50S ribosomal protein L28 [Corynebacterium efficiens YS-314] gi|67461532|sp|Q8FR24|RL28_COREF RecName: Full=50S ribosomal protein L28 gi|23492781|dbj|BAC17753.1| putative 50S ribosomal protein L28 [Corynebacterium efficiens YS-314] Length = 78 Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R M + L +S L+ ++ Sbjct: 1 MSAHCQVTGRQPSFGKSVSHSHRRTSRRWNPNVQRRKFFVPSMGRTITLTVSTKGLKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVAQIRAR 74 >gi|224024939|ref|ZP_03643305.1| hypothetical protein BACCOPRO_01670 [Bacteroides coprophilus DSM 18228] gi|224018175|gb|EEF76173.1| hypothetical protein BACCOPRO_01670 [Bacteroides coprophilus DSM 18228] Length = 86 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDVNLFTKKFYYVEQDCWISLNICANGLRVIN 60 Query: 61 RQGGLDRFLSNS 72 ++G LD L+ + Sbjct: 61 KKG-LDAALNEA 71 >gi|319950952|ref|ZP_08024824.1| 50S ribosomal protein L28 [Dietzia cinnamea P4] gi|319435374|gb|EFV90622.1| 50S ribosomal protein L28 [Dietzia cinnamea P4] Length = 78 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ R + ++ L +S +++++ Sbjct: 1 MSAHCQVTGRKPGFGKSVSHSHRRTNRRWNPNIQRRSYFLPSEGRRVTLTVSTKGIKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVARIRAR 74 >gi|301065048|ref|ZP_07205393.1| ribosomal protein L28 [delta proteobacterium NaphS2] gi|300440897|gb|EFK05317.1| ribosomal protein L28 [delta proteobacterium NaphS2] Length = 97 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC++ K ++G VSHA+NKT++R+ PNL + + D Q +++ ++S Sbjct: 28 MSKVCDICGKGPLTGYNVSHAHNKTKKRWYPNLQSVRCVRD--GQNVKIKACTSCIKS 83 >gi|307564684|ref|ZP_07627214.1| 50S ribosomal protein L28 [Prevotella amnii CRIS 21A-A] gi|307346612|gb|EFN91919.1| 50S ribosomal protein L28 [Prevotella amnii CRIS 21A-A] Length = 87 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K GN VSH+ ++T+R F NL + L+IS LR + Sbjct: 1 MSKICQITGKKAQIGNNVSHSKHRTKRSFDVNLFSKKFYYVEEDCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKKAVAK 74 >gi|119964156|ref|YP_949436.1| 50S ribosomal protein L28 [Arthrobacter aurescens TC1] gi|166226538|sp|A1RB24|RL28_ARTAT RecName: Full=50S ribosomal protein L28 gi|119951015|gb|ABM09926.1| ribosomal protein L28 [Arthrobacter aurescens TC1] Length = 78 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ + +RRF PN+ + + + L +S +++++ Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLTLSARGIKTID 60 Query: 61 RQG 63 +G Sbjct: 61 VRG 63 >gi|227501466|ref|ZP_03931515.1| 50S ribosomal protein L28 [Corynebacterium accolens ATCC 49725] gi|255324830|ref|ZP_05365943.1| ribosomal protein L28 [Corynebacterium tuberculostearicum SK141] gi|306835627|ref|ZP_07468636.1| 50S ribosomal protein L28 [Corynebacterium accolens ATCC 49726] gi|311740878|ref|ZP_07714705.1| 50S ribosomal protein L28 [Corynebacterium pseudogenitalium ATCC 33035] gi|227077491|gb|EEI15454.1| 50S ribosomal protein L28 [Corynebacterium accolens ATCC 49725] gi|255298130|gb|EET77434.1| ribosomal protein L28 [Corynebacterium tuberculostearicum SK141] gi|304568471|gb|EFM44027.1| 50S ribosomal protein L28 [Corynebacterium accolens ATCC 49726] gi|311304398|gb|EFQ80474.1| 50S ribosomal protein L28 [Corynebacterium pseudogenitalium ATCC 33035] Length = 78 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G +VSH++ +T RR+ PN+ R + L +S ++ ++ Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGMKIID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|311064682|ref|YP_003971407.1| 50S ribosomal protein L28P RpmB [Bifidobacterium bifidum PRL2010] gi|310867001|gb|ADP36370.1| RpmB LSU ribosomal protein L28P [Bifidobacterium bifidum PRL2010] Length = 98 Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ +GN+VSH++ KTRRRF PNL + + L +S +++++ Sbjct: 1 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 60 Query: 61 RQG 63 R G Sbjct: 61 RIG 63 >gi|213692825|ref|YP_002323411.1| ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524286|gb|ACJ53033.1| ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458995|dbj|BAJ69616.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 78 Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ GN+VSH++ KTRR F PNL +++ L +S +++++ Sbjct: 1 MSKTCQILGTRAGVGNRVSHSHRKTRRTFAPNLQSKRYWVPSLQRHVTLTVSAKGIKTID 60 Query: 61 RQG 63 R G Sbjct: 61 RIG 63 >gi|325279590|ref|YP_004252132.1| 50S ribosomal protein L28 [Odoribacter splanchnicus DSM 20712] gi|324311399|gb|ADY31952.1| 50S ribosomal protein L28 [Odoribacter splanchnicus DSM 20712] Length = 80 Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++T K M GN VSH+ + +R F NL + ++ +L +S LR + Sbjct: 1 MSRVCQITGKRAMGGNHVSHSKRRVKRTFSINLFKRNFYWPEEDRWIRLNVSADGLRLIN 60 Query: 61 RQGGLDRFLSNSKKENL 77 ++G L+ L ++ L Sbjct: 61 KRG-LNACLKDATAAGL 76 >gi|239978057|ref|ZP_04700581.1| putative 50S ribosomal protein L28 [Streptomyces albus J1074] gi|291449958|ref|ZP_06589348.1| 50S ribosomal protein L28 [Streptomyces albus J1074] gi|291352907|gb|EFE79809.1| 50S ribosomal protein L28 [Streptomyces albus J1074] Length = 78 Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GN +SH++ +T RRF PN+ R + +L +S A+++++ Sbjct: 1 MSAHCQLTGAKPGFGNSISHSHRRTSRRFDPNIQRRRYWLPSEGRTVRLTLSARAVKTID 60 Query: 61 RQG 63 G Sbjct: 61 VIG 63 >gi|295133100|ref|YP_003583776.1| 50S ribosomal protein L28 [Zunongwangia profunda SM-A87] gi|294981115|gb|ADF51580.1| 50S ribosomal protein L28 [Zunongwangia profunda SM-A87] Length = 79 Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFNANLVKKRFFIPEEDKWITLKVSTSALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + + ++ + Sbjct: 61 KKG-ISAVIKEARAK 74 >gi|228471213|ref|ZP_04056026.1| ribosomal protein L28 [Porphyromonas uenonis 60-3] gi|313887404|ref|ZP_07821094.1| ribosomal protein L28 [Porphyromonas asaccharolytica PR426713P-I] gi|332300840|ref|YP_004442761.1| ribosomal protein L28 [Porphyromonas asaccharolytica DSM 20707] gi|228307028|gb|EEK16110.1| ribosomal protein L28 [Porphyromonas uenonis 60-3] gi|312923172|gb|EFR33991.1| ribosomal protein L28 [Porphyromonas asaccharolytica PR426713P-I] gi|332177903|gb|AEE13593.1| ribosomal protein L28 [Porphyromonas asaccharolytica DSM 20707] Length = 82 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL R ++ L++S LR + Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRTFDVNLFRKKFYWPEEDRWISLKVSAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKK 74 R G L+ L + Sbjct: 61 RVG-LNEALRRASD 73 >gi|172040222|ref|YP_001799936.1| 50S ribosomal protein L28 [Corynebacterium urealyticum DSM 7109] gi|226738059|sp|B1VFG3|RL28_CORU7 RecName: Full=50S ribosomal protein L28 gi|171851526|emb|CAQ04502.1| 50S ribosomal protein L28 [Corynebacterium urealyticum DSM 7109] Length = 78 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G +VSH++ T RR+ PN+ R + L +S L++++ Sbjct: 1 MSAYCQVTGRKPGFGKQVSHSHRHTSRRWNPNVQRRKFYLPSEGRTITLTVSPKGLKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|238021654|ref|ZP_04602080.1| hypothetical protein GCWU000324_01557 [Kingella oralis ATCC 51147] gi|237866268|gb|EEP67310.1| hypothetical protein GCWU000324_01557 [Kingella oralis ATCC 51147] Length = 66 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHANNKT+RRFLPNL + + ++R++ ALR++++ G +D L++ Sbjct: 1 MSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWIRIRVTNAALRTIDKNG-IDAVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|254419542|ref|ZP_05033266.1| hypothetical protein BBAL3_1852 [Brevundimonas sp. BAL3] gi|196185719|gb|EDX80695.1| hypothetical protein BBAL3_1852 [Brevundimonas sp. BAL3] Length = 82 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 48/70 (68%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLS 78 SH+N KT+RRFLP+L + + SD + Q + LRIS ALR+++ +GGLD F+ ++ E LS Sbjct: 2 SHSNIKTKRRFLPSLKTVKVTSDSLGQTFSLRISNAALRTLDYKGGLDAFIVKARDEQLS 61 Query: 79 ARMRTLRSQI 88 + ++ Q+ Sbjct: 62 IAAQRIKRQV 71 >gi|40062599|gb|AAR37528.1| ribosomal protein L28 [uncultured marine bacterium 311] Length = 78 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++VC++T K + GNKVSHA N+TRR F PNL + + ++ L +S +R ++ Sbjct: 1 MAKVCQVTGKKPLKGNKVSHAKNRTRRTFEPNLHKHKFWIESEKRHVSLTVSAKGMRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G +D+ LS + Sbjct: 61 KKG-IDKVLSEIRSR 74 >gi|319902100|ref|YP_004161828.1| LSU ribosomal protein L28P [Bacteroides helcogenes P 36-108] gi|319417131|gb|ADV44242.1| LSU ribosomal protein L28P [Bacteroides helcogenes P 36-108] Length = 86 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSICANGLRIIN 60 Query: 61 RQGGLDRFLSNS 72 ++G LD L ++ Sbjct: 61 KKG-LDAALKDA 71 >gi|332671614|ref|YP_004454622.1| 50S ribosomal protein L28 [Cellulomonas fimi ATCC 484] gi|332340652|gb|AEE47235.1| ribosomal protein L28 [Cellulomonas fimi ATCC 484] Length = 79 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++ G+ VSH++ +T+RR+ PN+ R T + ++ +S + +++ Sbjct: 1 MSARCQVLGTVPGFGHAVSHSHRRTKRRWNPNVQRRTFFVPSLRRRVTFTVSARGITTID 60 Query: 61 RQG 63 R G Sbjct: 61 RLG 63 >gi|329120724|ref|ZP_08249386.1| 50S ribosomal protein L28 [Neisseria bacilliformis ATCC BAA-1200] gi|327460521|gb|EGF06857.1| 50S ribosomal protein L28 [Neisseria bacilliformis ATCC BAA-1200] Length = 65 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHANNKT+RRFLPNL + + +LR+S LR++++ G +D L++ Sbjct: 1 MSGNNVSHANNKTKRRFLPNLQTRRFWVESENRWVRLRVSNAGLRTIDKLG-IDAVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|254430435|ref|ZP_05044138.1| ribosomal protein L28 [Cyanobium sp. PCC 7001] gi|197624888|gb|EDY37447.1| ribosomal protein L28 [Cyanobium sp. PCC 7001] Length = 78 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ +T++ NL L + +LR+S ALR+++ Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHVRTKKLQQVNLQERRLWWAEGNRFVRLRVSTRALRTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + + L + L Sbjct: 61 KKG------LGAYAKELGVNLAKL 78 >gi|305681979|ref|ZP_07404783.1| 50S ribosomal protein L28 [Corynebacterium matruchotii ATCC 14266] gi|305658452|gb|EFM47955.1| 50S ribosomal protein L28 [Corynebacterium matruchotii ATCC 14266] Length = 111 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G VSH++ +T RR+ PN+ R + L +S L+ ++ Sbjct: 34 MSAICQVTGRKPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGRTITLTVSTKGLKVID 93 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 94 RDG-IESVVAKIRAR 107 >gi|159038467|ref|YP_001537720.1| ribosomal protein L28 [Salinispora arenicola CNS-205] gi|157917302|gb|ABV98729.1| ribosomal protein L28 [Salinispora arenicola CNS-205] Length = 78 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN VSH++ +TRRR+ PNL + +L ++ AL++V+ Sbjct: 1 MSRRCDVTGAKPSFGNAVSHSHRRTRRRWNPNLQNHRYWLPSERRFVRLTLTAKALKTVD 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|227832650|ref|YP_002834357.1| 50S ribosomal protein L28 [Corynebacterium aurimucosum ATCC 700975] gi|262182865|ref|ZP_06042286.1| 50S ribosomal protein L28 [Corynebacterium aurimucosum ATCC 700975] gi|254801353|sp|C3PF15|RL28_CORA7 RecName: Full=50S ribosomal protein L28 gi|227453666|gb|ACP32419.1| 50S ribosomal protein L28 [Corynebacterium aurimucosum ATCC 700975] Length = 78 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G +VSH++ +T RR+ PN+ R + L +S ++ ++ Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|302553139|ref|ZP_07305481.1| ribosomal protein L28 [Streptomyces viridochromogenes DSM 40736] gi|302470757|gb|EFL33850.1| ribosomal protein L28 [Streptomyces viridochromogenes DSM 40736] Length = 78 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C LT GN+VSH++ +T RRF PN+ + +LR+S +R+V+ Sbjct: 1 MSAHCMLTGARPGFGNRVSHSHRRTSRRFDPNIQSKRYWLPSEGRCVRLRLSVRGIRTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|226822870|gb|ACO83102.1| mitochondrial ribosomal protein L28 (predicted) [Dasypus novemcinctus] Length = 256 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 46/93 (49%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKV---SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + ++ + P L + L S+I+++K+ + ++ L ++ Sbjct: 80 WGGEGWILGHRYVNNDKFSKRVKKIWRPQLFQRELYSEILDRKFTVTVTMRTLDLIDEAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + +E+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPQEDLCSKFGMDLKRGMLLRLARQ 172 >gi|225012676|ref|ZP_03703111.1| ribosomal protein L28 [Flavobacteria bacterium MS024-2A] gi|225003209|gb|EEG41184.1| ribosomal protein L28 [Flavobacteria bacterium MS024-2A] Length = 79 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++CEL+ K VM GN VS A N+T+RRF N+ ++ L IS L+++ Sbjct: 1 MSKICELSGKRVMFGNNVSKALNRTKRRFDANIINKRFYIPEEDKWVTLTISTATLKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L ++++ Sbjct: 61 KKG-ISAVLKQAREK 74 >gi|153806281|ref|ZP_01958949.1| hypothetical protein BACCAC_00537 [Bacteroides caccae ATCC 43185] gi|160882780|ref|ZP_02063783.1| hypothetical protein BACOVA_00741 [Bacteroides ovatus ATCC 8483] gi|255693891|ref|ZP_05417566.1| ribosomal protein L28 [Bacteroides finegoldii DSM 17565] gi|260170249|ref|ZP_05756661.1| 50S ribosomal protein L28 [Bacteroides sp. D2] gi|293373980|ref|ZP_06620321.1| ribosomal protein L28 [Bacteroides ovatus SD CMC 3f] gi|299145598|ref|ZP_07038666.1| ribosomal protein L28 [Bacteroides sp. 3_1_23] gi|315918612|ref|ZP_07914852.1| conserved hypothetical protein [Bacteroides sp. D2] gi|149130958|gb|EDM22164.1| hypothetical protein BACCAC_00537 [Bacteroides caccae ATCC 43185] gi|156111804|gb|EDO13549.1| hypothetical protein BACOVA_00741 [Bacteroides ovatus ATCC 8483] gi|260620296|gb|EEX43167.1| ribosomal protein L28 [Bacteroides finegoldii DSM 17565] gi|292631056|gb|EFF49693.1| ribosomal protein L28 [Bacteroides ovatus SD CMC 3f] gi|298516089|gb|EFI39970.1| ribosomal protein L28 [Bacteroides sp. 3_1_23] gi|313692487|gb|EFS29322.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 86 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSICANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+ + + Sbjct: 61 KKG-LDAALTEAVAK 74 >gi|34541560|ref|NP_906039.1| 50S ribosomal protein L28 [Porphyromonas gingivalis W83] gi|188995755|ref|YP_001930007.1| 50S ribosomal protein L28 [Porphyromonas gingivalis ATCC 33277] gi|67461488|sp|Q7MTJ4|RL28_PORGI RecName: Full=50S ribosomal protein L28 gi|226699145|sp|B2RM15|RL28_PORG3 RecName: Full=50S ribosomal protein L28 gi|34397877|gb|AAQ66938.1| ribosomal protein L28 [Porphyromonas gingivalis W83] gi|188595435|dbj|BAG34410.1| 50S ribosomal protein L28 [Porphyromonas gingivalis ATCC 33277] Length = 79 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL R + LRIS LR + Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD + + ++ Sbjct: 61 KIG-LDAAIKRAAEK 74 >gi|189461327|ref|ZP_03010112.1| hypothetical protein BACCOP_01977 [Bacteroides coprocola DSM 17136] gi|189431856|gb|EDV00841.1| hypothetical protein BACCOP_01977 [Bacteroides coprocola DSM 17136] Length = 86 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDVNLFTKKFYYVEQDCWISLNICANGLRVIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+ + + Sbjct: 61 KKG-LDAALNEAVAK 74 >gi|325297728|ref|YP_004257645.1| 50S ribosomal protein L28 [Bacteroides salanitronis DSM 18170] gi|324317281|gb|ADY35172.1| 50S ribosomal protein L28 [Bacteroides salanitronis DSM 18170] Length = 86 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L+I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDVNLFTKKFYYVEQDCWISLKICANGLRVIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+ + + Sbjct: 61 KKG-LDAALTEAVAK 74 >gi|38233448|ref|NP_939215.1| 50S ribosomal protein L28 [Corynebacterium diphtheriae NCTC 13129] gi|67461437|sp|Q6NIC6|RL28_CORDI RecName: Full=50S ribosomal protein L28 gi|38199708|emb|CAE49368.1| 50S ribosomal protein L28-2 [Corynebacterium diphtheriae] Length = 78 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G VSH++ +T RR+ PN+ R + L +S L+ ++ Sbjct: 1 MSAICQVTGRQPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|146163214|ref|XP_001011035.2| ribosomal protein L28 containing protein [Tetrahymena thermophila] gi|146146077|gb|EAR90790.2| ribosomal protein L28 containing protein [Tetrahymena thermophila SB210] Length = 289 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S+ K +G + + K+ R + N+ L SDI+++K ++++S LR++++ Sbjct: 60 SQKGLFHGKQPKTGLQTCFSEKKSIRWWKVNVHEKYLWSDILQKKIRIQMSSKTLRTIDK 119 Query: 62 QGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 GG D ++ +K +N+ S LR ++ K+ + S Sbjct: 120 YGGFDNYVLLTKPKNMDSLYGEYLRKLMMFKLKDPS 155 >gi|86142312|ref|ZP_01060822.1| ribosomal protein L28 [Leeuwenhoekiella blandensis MED217] gi|85831064|gb|EAQ49521.1| ribosomal protein L28 [Leeuwenhoekiella blandensis MED217] Length = 79 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VSHA NKT+R+F NL + ++ L+IS AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSHAMNKTKRKFDANLIKKRFYIPEEDKWITLKISTAALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L ++ + Sbjct: 61 KKG-ITAVLKEARAK 74 >gi|297201373|ref|ZP_06918770.1| ribosomal protein L28 [Streptomyces sviceus ATCC 29083] gi|297147873|gb|EDY57815.2| ribosomal protein L28 [Streptomyces sviceus ATCC 29083] Length = 78 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C LT GN +S ++ +T RRF PN+ + +LR+S +++V+ Sbjct: 1 MSAHCMLTGARPGFGNHISFSHRRTSRRFDPNIQSKRYWLPSEGRYVRLRLSTKGIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 SIG 63 >gi|325269748|ref|ZP_08136359.1| 50S ribosomal protein L28 [Prevotella multiformis DSM 16608] gi|324987949|gb|EGC19921.1| 50S ribosomal protein L28 [Prevotella multiformis DSM 16608] Length = 87 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL +L++S LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWIELKVSAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|325955095|ref|YP_004238755.1| 50S ribosomal protein L28 [Weeksella virosa DSM 16922] gi|323437713|gb|ADX68177.1| 50S ribosomal protein L28 [Weeksella virosa DSM 16922] Length = 78 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K + GNKVSHANNKT+R F NL + ++ LR+S L+++ Sbjct: 1 MSKICQITGKRRLVGNKVSHANNKTKRTFEVNLFKKRFYLPEADEWITLRVSANGLKTIN 60 Query: 61 RQGGLDRFLSNSKKENL 77 + G +D + ++KE L Sbjct: 61 KLG-VDEAVKRARKEGL 76 >gi|283456725|ref|YP_003361289.1| 50S ribosomal protein L28 [Bifidobacterium dentium Bd1] gi|283103359|gb|ADB10465.1| 50S ribosomal protein L28,50S ribosomal protein L28 [Bifidobacterium dentium Bd1] Length = 81 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++ GN VSH++ KTRR F PNL R + + L ++ +++++ Sbjct: 1 MSKHCQVLGTRAHVGNAVSHSHRKTRRTFSPNLQRKRYYVPSLGRTVTLTLTPKGMKTID 60 Query: 61 RQG 63 RQG Sbjct: 61 RQG 63 >gi|114050843|ref|NP_001039461.1| 39S ribosomal protein L28, mitochondrial precursor [Bos taurus] gi|122135757|sp|Q2HJJ1|RM28_BOVIN RecName: Full=39S ribosomal protein L28, mitochondrial; Short=L28mt; Short=MRP-L28; Flags: Precursor gi|88682857|gb|AAI05312.1| Mitochondrial ribosomal protein L28 [Bos taurus] gi|296473443|gb|DAA15558.1| 39S ribosomal protein L28, mitochondrial precursor [Bos taurus] Length = 256 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKV---SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + ++ + P L + L S+I++ ++ + ++ L ++ Sbjct: 80 WGGEGWLKGHRYVNNDKFSKRVKKVWKPQLFQRELYSEILDTRFTVTVTMRTLDLIDEAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|241951236|ref|XP_002418340.1| ribosomal protein, large subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223641679|emb|CAX43640.1| ribosomal protein, large subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 270 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S NKT R PN+ L S+ + ++ +LR++ L+++ ++GGLD++L ++ + Sbjct: 109 SEYLNKTLRVHRPNVQWTKLWSETLNKRLRLRVATRVLKTISKEGGLDQYLLKSTPARVK 168 Query: 76 NLSARMRTLRSQILK 90 + + LR +IL+ Sbjct: 169 TMGLKAWQLRYRILQ 183 >gi|71892377|ref|YP_278111.1| 50S ribosomal protein L28 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123640780|sp|Q491X0|RL28_BLOPB RecName: Full=50S ribosomal protein L28 gi|71796483|gb|AAZ41234.1| 50S ribosomal subunit protein L28 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 75 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K MSGNK SHA N T+R F PN+ ++ LR+S +R ++ Sbjct: 1 MARVCQVTGKRPMSGNKRSHAMNATKRWFAPNIHSHRFWVASKKRFVALRLSTKGIRLID 60 Query: 61 RQGGLDRFLSNSKKEN 76 + G ++ F + + Sbjct: 61 KFG-IEYFFTKIYPKK 75 >gi|301166341|emb|CBW25917.1| 50S ribosomal protein L28 [Bacteriovorax marinus SJ] Length = 76 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC+LT K + GNKVSHA N+T+ PNL + Q +LR+S A+R+++ Sbjct: 1 MARVCDLTGKRRLVGNKVSHAKNRTKMTQKPNLQTKRVFDPESGQTIKLRLSTSAIRTLD 60 Query: 61 RQGGLDRFLSNSK 73 + G L +FL K Sbjct: 61 KVGSLSKFLKKYK 73 >gi|87302721|ref|ZP_01085532.1| 50S ribosomal protein L28 [Synechococcus sp. WH 5701] gi|87282604|gb|EAQ74562.1| 50S ribosomal protein L28 [Synechococcus sp. WH 5701] Length = 78 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ +T++ NL L + +LR++ LR+++ Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHVRTKKLQQVNLQERRLWWAEGNRWVKLRVATRTLRTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G LD + L + L Sbjct: 61 KKG-LDAY-----ARELGVNLAKL 78 >gi|160889553|ref|ZP_02070556.1| hypothetical protein BACUNI_01977 [Bacteroides uniformis ATCC 8492] gi|167763127|ref|ZP_02435254.1| hypothetical protein BACSTE_01496 [Bacteroides stercoris ATCC 43183] gi|218131137|ref|ZP_03459941.1| hypothetical protein BACEGG_02742 [Bacteroides eggerthii DSM 20697] gi|270296677|ref|ZP_06202876.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317476986|ref|ZP_07936228.1| ribosomal protein L28 [Bacteroides eggerthii 1_2_48FAA] gi|329954828|ref|ZP_08295845.1| ribosomal protein L28 [Bacteroides clarus YIT 12056] gi|329963570|ref|ZP_08301049.1| ribosomal protein L28 [Bacteroides fluxus YIT 12057] gi|156861070|gb|EDO54501.1| hypothetical protein BACUNI_01977 [Bacteroides uniformis ATCC 8492] gi|167699467|gb|EDS16046.1| hypothetical protein BACSTE_01496 [Bacteroides stercoris ATCC 43183] gi|217986657|gb|EEC52991.1| hypothetical protein BACEGG_02742 [Bacteroides eggerthii DSM 20697] gi|270272664|gb|EFA18527.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316906779|gb|EFV28491.1| ribosomal protein L28 [Bacteroides eggerthii 1_2_48FAA] gi|328526932|gb|EGF53943.1| ribosomal protein L28 [Bacteroides clarus YIT 12056] gi|328528559|gb|EGF55530.1| ribosomal protein L28 [Bacteroides fluxus YIT 12057] Length = 86 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSICANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L ++ + Sbjct: 61 KKG-LDAALKDAVAK 74 >gi|238898969|ref|YP_002924651.1| 50S ribosomal subunit protein L28 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259646741|sp|C4K7G0|RL28_HAMD5 RecName: Full=50S ribosomal protein L28 gi|229466729|gb|ACQ68503.1| 50S ribosomal subunit protein L28 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 78 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC++TKK ++GN+ SHA N T+RRFLPNL R + ++ LR+S +R ++ Sbjct: 1 MSRVCQVTKKRPVTGNRRSHAMNATKRRFLPNLHRHRFWIESEKRFITLRLSAKGIRIID 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G ++ L K Sbjct: 61 KKG-IEAVLEEIKAR 74 >gi|86133834|ref|ZP_01052416.1| 50S ribosomal protein L28 [Polaribacter sp. MED152] gi|85820697|gb|EAQ41844.1| 50S ribosomal protein L28 [Polaribacter sp. MED152] Length = 79 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VS A N+T+R F NL ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSKALNRTKRTFDANLMTKRFYIPEEDKWVTLKVSASALKNIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + + ++ Sbjct: 61 KKG-ISAVIKEARAN 74 >gi|269215114|ref|ZP_05987771.2| ribosomal protein L28 [Neisseria lactamica ATCC 23970] gi|288576203|ref|ZP_05978387.2| ribosomal protein L28 [Neisseria mucosa ATCC 25996] gi|304386501|ref|ZP_07368789.1| 50S ribosomal protein L28 [Neisseria meningitidis ATCC 13091] gi|269208287|gb|EEZ74742.1| ribosomal protein L28 [Neisseria lactamica ATCC 23970] gi|288566043|gb|EFC87603.1| ribosomal protein L28 [Neisseria mucosa ATCC 25996] gi|304339330|gb|EFM05402.1| 50S ribosomal protein L28 [Neisseria meningitidis ATCC 13091] Length = 65 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHANNKT+RRFLPNL + + +LR+S ALR++++ G +D L++ Sbjct: 1 MSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTIDKVG-IDVVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|323345510|ref|ZP_08085733.1| 50S ribosomal protein L28 [Prevotella oralis ATCC 33269] gi|323093624|gb|EFZ36202.1| 50S ribosomal protein L28 [Prevotella oralis ATCC 33269] Length = 87 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFNKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|47225028|emb|CAF97443.1| unnamed protein product [Tetraodon nigroviridis] Length = 251 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + +SG + ++ + + ++ + P L + L S+I++ K+ + ++ L ++ Sbjct: 79 WGGEGWISGYRYANNDKMSTRLKKTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAY 138 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 G D ++ + KE+L S L+ +L +++ +S+ Sbjct: 139 GFDFYILKTPKEDLNSKLGMDLKRAMLLRLARRST 173 >gi|304384257|ref|ZP_07366668.1| 50S ribosomal protein L28 [Prevotella marshii DSM 16973] gi|304334573|gb|EFM00855.1| 50S ribosomal protein L28 [Prevotella marshii DSM 16973] Length = 87 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFNKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|303235498|ref|ZP_07322110.1| ribosomal protein L28 [Prevotella disiens FB035-09AN] gi|302484297|gb|EFL47280.1| ribosomal protein L28 [Prevotella disiens FB035-09AN] Length = 87 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISTAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|150005786|ref|YP_001300530.1| 50S ribosomal protein L28 [Bacteroides vulgatus ATCC 8482] gi|212693208|ref|ZP_03301336.1| hypothetical protein BACDOR_02718 [Bacteroides dorei DSM 17855] gi|237709951|ref|ZP_04540432.1| 50S ribosomal protein L28 [Bacteroides sp. 9_1_42FAA] gi|237725384|ref|ZP_04555865.1| 50S ribosomal protein L28 [Bacteroides sp. D4] gi|254882033|ref|ZP_05254743.1| 50S ribosomal protein L28 [Bacteroides sp. 4_3_47FAA] gi|265753602|ref|ZP_06088957.1| 50S ribosomal protein L28 [Bacteroides sp. 3_1_33FAA] gi|294776164|ref|ZP_06741653.1| ribosomal protein L28 [Bacteroides vulgatus PC510] gi|319640959|ref|ZP_07995667.1| 50S ribosomal protein L28 [Bacteroides sp. 3_1_40A] gi|166226543|sp|A6L5E4|RL28_BACV8 RecName: Full=50S ribosomal protein L28 gi|149934210|gb|ABR40908.1| 50S ribosomal protein L28 [Bacteroides vulgatus ATCC 8482] gi|212664313|gb|EEB24885.1| hypothetical protein BACDOR_02718 [Bacteroides dorei DSM 17855] gi|229436071|gb|EEO46148.1| 50S ribosomal protein L28 [Bacteroides dorei 5_1_36/D4] gi|229456044|gb|EEO61765.1| 50S ribosomal protein L28 [Bacteroides sp. 9_1_42FAA] gi|254834826|gb|EET15135.1| 50S ribosomal protein L28 [Bacteroides sp. 4_3_47FAA] gi|263235316|gb|EEZ20840.1| 50S ribosomal protein L28 [Bacteroides sp. 3_1_33FAA] gi|294449987|gb|EFG18498.1| ribosomal protein L28 [Bacteroides vulgatus PC510] gi|317387404|gb|EFV68275.1| 50S ribosomal protein L28 [Bacteroides sp. 3_1_40A] Length = 86 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDVNLFTKKFYYVEQDCWISLNICANGLRVIN 60 Query: 61 RQGGLDRFLSNS 72 ++G LD L+ + Sbjct: 61 KKG-LDAALNEA 71 >gi|326383108|ref|ZP_08204797.1| ribosomal protein L28 [Gordonia neofelifaecis NRRL B-59395] gi|326198244|gb|EGD55429.1| ribosomal protein L28 [Gordonia neofelifaecis NRRL B-59395] Length = 78 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T + G +VSH++ +T R++ PNL R T + + LR+S ++ ++ Sbjct: 1 MAARCQVTGRVPGFGRQVSHSHRRTSRQWRPNLFRKTYWVPSLSRNVTLRVSAKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|260942223|ref|XP_002615410.1| hypothetical protein CLUG_04292 [Clavispora lusitaniae ATCC 42720] gi|238850700|gb|EEQ40164.1| hypothetical protein CLUG_04292 [Clavispora lusitaniae ATCC 42720] Length = 263 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S + NK R LPN+ R L S+ + ++ R+S LR+V ++GGLD +L ++ + Sbjct: 108 SESGNKNNRVHLPNIVRAKLWSETLNKRISARVSTTLLRTVTKEGGLDNYLLKDKPARVK 167 Query: 76 NLSARMRTLRSQILKKMSEKSS 97 + + L+ I+KK +++ Sbjct: 168 TMGLKAWRLKYDIMKKKEIEAN 189 >gi|291515234|emb|CBK64444.1| LSU ribosomal protein L28P [Alistipes shahii WAL 8301] Length = 77 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 39/61 (63%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +VCE+T K + GN VSH++++T+R+F PNL S+ + L++S ++++ ++ Sbjct: 2 KVCEITGKVAIVGNNVSHSHHRTKRKFSPNLKTKRFWSEQEGRWITLKVSAAGMKTINKK 61 Query: 63 G 63 G Sbjct: 62 G 62 >gi|297192961|ref|ZP_06910359.1| 50S ribosomal protein L28 [Streptomyces pristinaespiralis ATCC 25486] gi|297151573|gb|EDY66542.2| 50S ribosomal protein L28 [Streptomyces pristinaespiralis ATCC 25486] Length = 78 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C LT GN++SH++ +T RRF PN+ R + +L +S A+++V+ Sbjct: 1 MSAHCMLTGAQPGFGNRISHSHRRTSRRFDPNIQRKRYWLPGEGRHVRLTLSARAVKTVD 60 Query: 61 RQG 63 G Sbjct: 61 VIG 63 >gi|282859677|ref|ZP_06268779.1| ribosomal protein L28 [Prevotella bivia JCVIHMP010] gi|282587595|gb|EFB92798.1| ribosomal protein L28 [Prevotella bivia JCVIHMP010] Length = 87 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K GN VSH+ ++T+R F NL E L+IS LR + Sbjct: 1 MSKICQITGKKAQLGNNVSHSKHRTKRSFDVNLFSKKFYYVEEECWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKKAVAK 74 >gi|300858075|ref|YP_003783058.1| 50S ribosomal protein L28 [Corynebacterium pseudotuberculosis FRC41] gi|300685529|gb|ADK28451.1| 50S ribosomal protein L28 [Corynebacterium pseudotuberculosis FRC41] gi|302205797|gb|ADL10139.1| 50S ribosomal protein L28 [Corynebacterium pseudotuberculosis C231] gi|302330356|gb|ADL20550.1| 50S ribosomal protein L28 [Corynebacterium pseudotuberculosis 1002] gi|308276032|gb|ADO25931.1| 50S ribosomal protein L28 [Corynebacterium pseudotuberculosis I19] Length = 78 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS +C++T + G VSH++ +T RR+ PN+ R + L +S L+ ++ Sbjct: 1 MSAICQVTGRKPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IESVVAKIRAR 74 >gi|198274632|ref|ZP_03207164.1| hypothetical protein BACPLE_00784 [Bacteroides plebeius DSM 17135] gi|198272079|gb|EDY96348.1| hypothetical protein BACPLE_00784 [Bacteroides plebeius DSM 17135] Length = 86 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K + GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKALIGNNVSHSKRRTKRTFDVNLFTKKFYYVEQDCWISLNICANGLRVIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+ + + Sbjct: 61 KKG-LDAALNEAVAK 74 >gi|189465613|ref|ZP_03014398.1| hypothetical protein BACINT_01971 [Bacteroides intestinalis DSM 17393] gi|224540010|ref|ZP_03680549.1| hypothetical protein BACCELL_04922 [Bacteroides cellulosilyticus DSM 14838] gi|189437887|gb|EDV06872.1| hypothetical protein BACINT_01971 [Bacteroides intestinalis DSM 17393] gi|224518377|gb|EEF87482.1| hypothetical protein BACCELL_04922 [Bacteroides cellulosilyticus DSM 14838] Length = 86 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L I LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSICANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+++ + Sbjct: 61 KKG-LDAALNDAVAK 74 >gi|261880532|ref|ZP_06006959.1| 50S ribosomal protein L28 [Prevotella bergensis DSM 17361] gi|270332755|gb|EFA43541.1| 50S ribosomal protein L28 [Prevotella bergensis DSM 17361] Length = 87 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKRAQIGCNVSHSKRHTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVAK 74 >gi|297283120|ref|XP_001084527.2| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 2 [Macaca mulatta] Length = 284 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 103 SQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFTVTVTMRTLDL 162 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 163 IDEAYGFDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 200 >gi|110637068|ref|YP_677275.1| 50S ribosomal protein L28P [Cytophaga hutchinsonii ATCC 33406] gi|123354785|sp|Q11XD1|RL28_CYTH3 RecName: Full=50S ribosomal protein L28 gi|110279749|gb|ABG57935.1| LSU ribosomal protein L28P [Cytophaga hutchinsonii ATCC 33406] Length = 80 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K +GN VSHANNKT+R F PN+ + + L++S A++++ Sbjct: 1 MARVCQITGKKTRTGNNVSHANNKTKRTFAPNIQKKRFFLSEENRWVTLKLSTKAIKTIS 60 Query: 61 RQGGLDRFLSNS 72 +G L L + Sbjct: 61 SKG-LSAVLEKA 71 >gi|237716495|ref|ZP_04546976.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237720686|ref|ZP_04551167.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262408093|ref|ZP_06084641.1| ribosomal protein L28 [Bacteroides sp. 2_1_22] gi|294645087|ref|ZP_06722813.1| ribosomal protein L28 [Bacteroides ovatus SD CC 2a] gi|294809487|ref|ZP_06768190.1| ribosomal protein L28 [Bacteroides xylanisolvens SD CC 1b] gi|298484169|ref|ZP_07002335.1| ribosomal protein L28 [Bacteroides sp. D22] gi|229444142|gb|EEO49933.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229449521|gb|EEO55312.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262354901|gb|EEZ03993.1| ribosomal protein L28 [Bacteroides sp. 2_1_22] gi|292639593|gb|EFF57885.1| ribosomal protein L28 [Bacteroides ovatus SD CC 2a] gi|294443305|gb|EFG12069.1| ribosomal protein L28 [Bacteroides xylanisolvens SD CC 1b] gi|295084180|emb|CBK65703.1| LSU ribosomal protein L28P [Bacteroides xylanisolvens XB1A] gi|298269673|gb|EFI11268.1| ribosomal protein L28 [Bacteroides sp. D22] Length = 86 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L + LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+ + + Sbjct: 61 KKG-LDAALTEAVAK 74 >gi|289428038|ref|ZP_06429742.1| ribosomal protein L28 [Propionibacterium acnes J165] gi|289158921|gb|EFD07121.1| ribosomal protein L28 [Propionibacterium acnes J165] gi|313808366|gb|EFS46833.1| ribosomal protein L28 [Propionibacterium acnes HL087PA2] gi|313818213|gb|EFS55927.1| ribosomal protein L28 [Propionibacterium acnes HL046PA2] gi|313821128|gb|EFS58842.1| ribosomal protein L28 [Propionibacterium acnes HL036PA1] gi|313824051|gb|EFS61765.1| ribosomal protein L28 [Propionibacterium acnes HL036PA2] gi|313827203|gb|EFS64917.1| ribosomal protein L28 [Propionibacterium acnes HL063PA1] gi|314926906|gb|EFS90737.1| ribosomal protein L28 [Propionibacterium acnes HL036PA3] gi|314961918|gb|EFT06019.1| ribosomal protein L28 [Propionibacterium acnes HL002PA2] gi|314979538|gb|EFT23632.1| ribosomal protein L28 [Propionibacterium acnes HL072PA2] gi|314988381|gb|EFT32472.1| ribosomal protein L28 [Propionibacterium acnes HL005PA2] gi|314990277|gb|EFT34368.1| ribosomal protein L28 [Propionibacterium acnes HL005PA3] gi|315083856|gb|EFT55832.1| ribosomal protein L28 [Propionibacterium acnes HL027PA2] gi|315087265|gb|EFT59241.1| ribosomal protein L28 [Propionibacterium acnes HL002PA3] gi|315089683|gb|EFT61659.1| ribosomal protein L28 [Propionibacterium acnes HL072PA1] gi|327326655|gb|EGE68443.1| ribosomal protein L28 [Propionibacterium acnes HL096PA3] gi|327449527|gb|EGE96181.1| ribosomal protein L28 [Propionibacterium acnes HL013PA2] gi|328757436|gb|EGF71052.1| ribosomal protein L28 [Propionibacterium acnes HL020PA1] gi|332676542|gb|AEE73358.1| 50S ribosomal protein L28 [Propionibacterium acnes 266] Length = 78 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++ GN VSH+ +RR+ PN+ + + +K L ++ A++ ++ Sbjct: 1 MSRRCQVRGTKPEFGNNVSHSQRHIKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 60 Query: 61 RQG 63 R+G Sbjct: 61 RRG 63 >gi|225023630|ref|ZP_03712822.1| hypothetical protein EIKCOROL_00490 [Eikenella corrodens ATCC 23834] gi|224943512|gb|EEG24721.1| hypothetical protein EIKCOROL_00490 [Eikenella corrodens ATCC 23834] Length = 65 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHANNKT+RRFLPNL + + +LR+S ALR +++ G +D L++ Sbjct: 1 MSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRLIDKVG-IDAVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|53713720|ref|YP_099712.1| 50S ribosomal protein L28 [Bacteroides fragilis YCH46] gi|60681990|ref|YP_212134.1| 50S ribosomal protein L28 [Bacteroides fragilis NCTC 9343] gi|253565668|ref|ZP_04843123.1| 50S ribosomal protein L28 [Bacteroides sp. 3_2_5] gi|265764044|ref|ZP_06092612.1| ribosomal protein L28 [Bacteroides sp. 2_1_16] gi|67461366|sp|Q64TK1|RL28_BACFR RecName: Full=50S ribosomal protein L28 gi|81314946|sp|Q5LCF5|RL28_BACFN RecName: Full=50S ribosomal protein L28 gi|52216585|dbj|BAD49178.1| 50S ribosomal protein L28 [Bacteroides fragilis YCH46] gi|60493424|emb|CAH08210.1| 50S ribosomal protein L28 [Bacteroides fragilis NCTC 9343] gi|251945947|gb|EES86354.1| 50S ribosomal protein L28 [Bacteroides sp. 3_2_5] gi|263256652|gb|EEZ27998.1| ribosomal protein L28 [Bacteroides sp. 2_1_16] gi|301163428|emb|CBW22979.1| 50S ribosomal protein L28 [Bacteroides fragilis 638R] Length = 86 Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L + LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCAAGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+++ + Sbjct: 61 KKG-LDAALNDAVAK 74 >gi|123243688|emb|CAM26403.1| mitochondrial ribosomal protein L28 [Homo sapiens] Length = 240 Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|46138459|ref|XP_390920.1| hypothetical protein FG10744.1 [Gibberella zeae PH-1] Length = 256 Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Query: 11 TVMSGNKVS-HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN V+ NNK RR + PN+ ++ + R++ L+++ R+GGL +L Sbjct: 70 RIRFGNTVAEKYNNKARRFWRPNVHVKVFKLPALDANVKTRLTLRVLKTIRREGGLQEYL 129 Query: 70 SN---SKKENLSARMRTLRSQILKKM 92 ++ + L LR +++ Sbjct: 130 LKSKPARIKELGPGGWNLRWLLMQSK 155 >gi|255009417|ref|ZP_05281543.1| 50S ribosomal protein L28 [Bacteroides fragilis 3_1_12] gi|313147176|ref|ZP_07809369.1| 50S ribosomal protein L28 [Bacteroides fragilis 3_1_12] gi|313135943|gb|EFR53303.1| 50S ribosomal protein L28 [Bacteroides fragilis 3_1_12] Length = 86 Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L + LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCAAGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+++ + Sbjct: 61 KKG-LDAALNDAVAK 74 >gi|300727625|ref|ZP_07061014.1| ribosomal protein L28-related protein [Prevotella bryantii B14] gi|299775145|gb|EFI71748.1| ribosomal protein L28-related protein [Prevotella bryantii B14] Length = 87 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQLGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L N+ + Sbjct: 61 KVG-LDAALQNAVAK 74 >gi|167535430|ref|XP_001749389.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772255|gb|EDQ85910.1| predicted protein [Monosiga brevicollis MX1] Length = 140 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 4/92 (4%) Query: 9 KKTVMSGNKVS---HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGL 65 K V+ G K + + K+ + + PN+ SDI+++ +++++ A+R +++ GG Sbjct: 28 GKKVLFGVKSAEDKKSPIKSLKIWKPNVFEKRYYSDILKRYTKVKVTTKAIRCIDKAGGF 87 Query: 66 DRFLSNSKKENL-SARMRTLRSQILKKMSEKS 96 D ++ ++ E L S LR ++L+KM+ ++ Sbjct: 88 DNYILMTQPEKLDSELGMKLRVEMLQKMARRA 119 >gi|88854442|ref|ZP_01129109.1| 50S ribosomal protein L28 [marine actinobacterium PHSC20C1] gi|88816250|gb|EAR26105.1| 50S ribosomal protein L28 [marine actinobacterium PHSC20C1] Length = 78 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ +T+RRF PN+ + T + + L++S ++ ++ Sbjct: 1 MAATCQVTGAIPGFGHSISHSHRRTKRRFDPNIQKKTYFVPSLRRNVTLQLSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G S ++L AR + Sbjct: 61 ARG------IESVVKDLLARGEKI 78 >gi|281425621|ref|ZP_06256534.1| 50S ribosomal protein L28 [Prevotella oris F0302] gi|299140817|ref|ZP_07033955.1| 50S ribosomal protein L28 [Prevotella oris C735] gi|281400208|gb|EFB31039.1| 50S ribosomal protein L28 [Prevotella oris F0302] gi|298577783|gb|EFI49651.1| 50S ribosomal protein L28 [Prevotella oris C735] Length = 87 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|119606236|gb|EAW85830.1| mitochondrial ribosomal protein L28, isoform CRA_c [Homo sapiens] Length = 287 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 106 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 165 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 166 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 203 >gi|297571125|ref|YP_003696899.1| ribosomal protein L28 [Arcanobacterium haemolyticum DSM 20595] gi|296931472|gb|ADH92280.1| ribosomal protein L28 [Arcanobacterium haemolyticum DSM 20595] Length = 77 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T + G VSH++ +T RRF PNL +++ L +S +++++ Sbjct: 1 MATYCQVTGRKPQFGKTVSHSHKRTSRRFNPNLQTKKYYVPSLKRTISLTVSAKGIKTID 60 Query: 61 RQG 63 +G Sbjct: 61 SKG 63 >gi|148274121|ref|YP_001223682.1| 50S ribosomal protein L28 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|170783360|ref|YP_001711694.1| 50S ribosomal protein L28 [Clavibacter michiganensis subsp. sepedonicus] gi|166226562|sp|A5CV85|RL28_CLAM3 RecName: Full=50S ribosomal protein L28 gi|189042428|sp|B0RDL1|RL28_CLAMS RecName: Full=50S ribosomal protein L28 gi|147832051|emb|CAN03024.1| 50S ribosomal protein L28 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|169157930|emb|CAQ03140.1| 50S ribosomal protein L28 [Clavibacter michiganensis subsp. sepedonicus] Length = 78 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ +SH++ +T+RRF PN+ + T + + +L +S ++ ++ Sbjct: 1 MAATCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYYVPSLRRNVKLTLSAKGIKVID 60 Query: 61 RQG 63 +G Sbjct: 61 ARG 63 >gi|37514850|gb|AAH00990.2| Mitochondrial ribosomal protein L28 [Homo sapiens] gi|189054796|dbj|BAG37621.1| unnamed protein product [Homo sapiens] gi|312150214|gb|ADQ31619.1| mitochondrial ribosomal protein L28 [synthetic construct] Length = 256 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|320354592|ref|YP_004195931.1| 50S ribosomal protein L28P [Desulfobulbus propionicus DSM 2032] gi|320123094|gb|ADW18640.1| LSU ribosomal protein L28P [Desulfobulbus propionicus DSM 2032] Length = 64 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C + K +GN VSHA+NKTRRR++PNL R+ + + +RS Sbjct: 1 MARNCAICGKGPSTGNNVSHAHNKTRRRWMPNLQRVRM-VTANGGTVHANVCTRCIRS 57 >gi|327291037|ref|XP_003230228.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Anolis carolinensis] Length = 262 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHAN---NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + +SG + + + N+ ++ + P L L S+I+++K + ++ L Sbjct: 85 SQQGLWGGEGWVSGFRYAKNDKLSNRVKKIWKPQLFTRELYSEILDRKLIITVTARTLDL 144 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD +L + K L S L+ +L +++ K Sbjct: 145 IDAAFGLDFYLLKTPKAELCSKLGMDLKRTLLLRLARK 182 >gi|294673491|ref|YP_003574107.1| 50S ribosomal protein L28 [Prevotella ruminicola 23] gi|294471764|gb|ADE81153.1| ribosomal protein L28 [Prevotella ruminicola 23] Length = 87 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL QL+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWIQLKISAAGLRMIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVAK 74 >gi|26051229|ref|NP_006419.2| 39S ribosomal protein L28, mitochondrial precursor [Homo sapiens] gi|85695426|sp|Q13084|RM28_HUMAN RecName: Full=39S ribosomal protein L28, mitochondrial; Short=L28mt; Short=MRP-L28; AltName: Full=Melanoma antigen p15; AltName: Full=Melanoma-associated antigen recognized by T lymphocytes; Flags: Precursor gi|38197174|gb|AAH00507.2| Mitochondrial ribosomal protein L28 [Homo sapiens] gi|66350943|emb|CAI95594.1| mitochondrial ribosomal protein L28 [Homo sapiens] gi|119606233|gb|EAW85827.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens] gi|119606235|gb|EAW85829.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens] gi|119606238|gb|EAW85832.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens] gi|119606240|gb|EAW85834.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens] Length = 256 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|189499571|ref|YP_001959041.1| 50S ribosomal protein L28 [Chlorobium phaeobacteroides BS1] gi|226738050|sp|B3EMT2|RL28_CHLPB RecName: Full=50S ribosomal protein L28 gi|189495012|gb|ACE03560.1| ribosomal protein L28 [Chlorobium phaeobacteroides BS1] Length = 72 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN+TR+RF PNL + + ++ ++R+S A++ + Sbjct: 1 MSKVCILTGKRPTYGNNVSHANNRTRKRFEPNLHTKRIWVEEEKRWVKVRVSAKAMKIMS 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|294633336|ref|ZP_06711895.1| ribosomal protein L28 [Streptomyces sp. e14] gi|292831117|gb|EFF89467.1| ribosomal protein L28 [Streptomyces sp. e14] Length = 78 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT ++ G+++S ++ +T+RRF PN+ + +L +S L++V+ Sbjct: 1 MSAHCQLTGRSPGFGHRISRSHRRTKRRFDPNIQHKRYWLPSEGRHVRLTLSAKGLKTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|134281303|ref|ZP_01768012.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 305] gi|226194518|ref|ZP_03790116.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pakistan 9] gi|134247609|gb|EBA47694.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 305] gi|225933603|gb|EEH29592.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pakistan 9] Length = 65 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHANNKT+RRFLPNL + + +LR+S LR +++ G +D L++ Sbjct: 1 MSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLIDKNG-IDSVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|323699071|ref|ZP_08110983.1| ribosomal protein L28 [Desulfovibrio sp. ND132] gi|323459003|gb|EGB14868.1| ribosomal protein L28 [Desulfovibrio desulfuricans ND132] Length = 71 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VC++ K +GN VSH++ KT+RRF+PNL ++ + Q ++ +R Sbjct: 1 MSQVCDICGKGPQTGNNVSHSHIKTKRRFMPNLQKVRHQLES-GQVVSIKACTRCIR 56 >gi|325856873|ref|ZP_08172371.1| ribosomal protein L28 [Prevotella denticola CRIS 18C-A] gi|327314533|ref|YP_004329970.1| 50S ribosomal protein L28 [Prevotella denticola F0289] gi|325483246|gb|EGC86223.1| ribosomal protein L28 [Prevotella denticola CRIS 18C-A] gi|326945968|gb|AEA21853.1| ribosomal protein L28 [Prevotella denticola F0289] Length = 87 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL +L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWIELKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KMG-LDAALKQAVSK 74 >gi|291000967|ref|XP_002683050.1| predicted protein [Naegleria gruberi] gi|284096679|gb|EFC50306.1| predicted protein [Naegleria gruberi] Length = 87 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 45/69 (65%) Query: 12 VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN 71 + +GN+ S + KT+R+++PN + L S+ ++ + QLR + ALR +++ GGLD +L Sbjct: 13 IQTGNQRSFSERKTKRKWMPNSHWVKLYSEALDTRVQLRATSKALRCIDKSGGLDNYLIE 72 Query: 72 SKKENLSAR 80 ++ E + +R Sbjct: 73 TRPELVGSR 81 >gi|24214862|ref|NP_712343.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str. 56601] gi|45657626|ref|YP_001712.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|67461465|sp|Q72RI5|RL28_LEPIC RecName: Full=50S ribosomal protein L28 gi|67461531|sp|Q8F483|RL28_LEPIN RecName: Full=50S ribosomal protein L28 gi|24195881|gb|AAN49361.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str. 56601] gi|45600866|gb|AAS70349.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 94 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+T + +SGN VSH++ KTRR + NL + + + + +R+S ALR++ Sbjct: 1 MARRCEVTGRGTVSGNNVSHSHIKTRRTWKVNLIKKRIFLEDENRWVTIRLSTRALRTLR 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|303326851|ref|ZP_07357293.1| ribosomal protein L28 [Desulfovibrio sp. 3_1_syn3] gi|302862839|gb|EFL85771.1| ribosomal protein L28 [Desulfovibrio sp. 3_1_syn3] Length = 78 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C+ K GN VSH+N KT+RRF PNL R+ L + LRS Sbjct: 10 MSKECDFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQFPD-GSVRTLTVCTRCLRS 66 >gi|207721440|ref|YP_002251881.1| 50s ribosomal protein l28 [Ralstonia solanacearum MolK2] gi|207742579|ref|YP_002258971.1| 50s ribosomal protein l28 [Ralstonia solanacearum IPO1609] gi|206586600|emb|CAQ17187.1| 50s ribosomal protein l28 [Ralstonia solanacearum MolK2] gi|206593973|emb|CAQ60900.1| 50s ribosomal protein l28 [Ralstonia solanacearum IPO1609] Length = 65 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSHANNKT+RRFLPNL + + LR+S LR ++++G +D L++ Sbjct: 1 MVGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLIDKKG-IDEVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|29346326|ref|NP_809829.1| 50S ribosomal protein L28 [Bacteroides thetaiotaomicron VPI-5482] gi|253568251|ref|ZP_04845662.1| 50S ribosomal protein L28 [Bacteroides sp. 1_1_6] gi|67461521|sp|Q8A999|RL28_BACTN RecName: Full=50S ribosomal protein L28 gi|29338221|gb|AAO76023.1| 50S ribosomal protein L28 [Bacteroides thetaiotaomicron VPI-5482] gi|251842324|gb|EES70404.1| 50S ribosomal protein L28 [Bacteroides sp. 1_1_6] Length = 86 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L + LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+++ + Sbjct: 61 KKG-LDAALNDAVAK 74 >gi|52632406|gb|AAH02293.2| Mitochondrial ribosomal protein L28 [Mus musculus] Length = 267 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + ++ G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 85 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 144 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 145 IDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 182 >gi|302546717|ref|ZP_07299059.1| ribosomal protein L28 [Streptomyces hygroscopicus ATCC 53653] gi|302464335|gb|EFL27428.1| ribosomal protein L28 [Streptomyces himastatinicus ATCC 53653] Length = 78 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT + G K+SH++ +T+RRF PN+ R + +L +S +++V+ Sbjct: 1 MSAHCQLTGRQPGFGQKISHSHRRTKRRFDPNIQRKRYWLPSEGRHVRLTLSTKGIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 VIG 63 >gi|330467292|ref|YP_004405035.1| ribosomal protein L28 [Verrucosispora maris AB-18-032] gi|328810263|gb|AEB44435.1| ribosomal protein L28 [Verrucosispora maris AB-18-032] Length = 78 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN VSH++ +TRRR+ PNL + L ++ AL++V+ Sbjct: 1 MSRRCDVTGAKPSFGNAVSHSHRRTRRRWNPNLQNHRYWLPSERRWVSLTLTAKALKTVD 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|111022583|ref|YP_705555.1| 50S ribosomal protein L28 [Rhodococcus jostii RHA1] gi|110822113|gb|ABG97397.1| 50S ribosomal protein L28 [Rhodococcus jostii RHA1] Length = 78 Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ + T ++ L +S +++++ Sbjct: 1 MSAHCQVTGRQPGFGKSVSHSHKRTNRRWDPNIQKKTYFLPSEGRRVTLTLSAKGIKTID 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVARIRAR 74 >gi|308178360|ref|YP_003917766.1| 50S ribosomal protein L28 [Arthrobacter arilaitensis Re117] gi|307745823|emb|CBT76795.1| 50S ribosomal protein L28 [Arthrobacter arilaitensis Re117] Length = 78 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++T T G+ +SH++ + +RRF PN+ + T + +K L +S ++ ++ Sbjct: 1 MAAVCQVTGTTPAFGHSISHSHRRNKRRFDPNIQKKTYYVPSLRRKVTLTLSVKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G +D ++ +L A+ L Sbjct: 61 ARG-IDAVIA-----DLIAKGVKL 78 >gi|73959215|ref|XP_537023.2| PREDICTED: similar to mitochondrial ribosomal protein L28 isoform 1 [Canis familiaris] Length = 257 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 44/93 (47%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKV--SHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + H + ++ + P L + L S+I++ K+ + ++ L ++ Sbjct: 81 WGGEGWVVGYRYVGDHQLSKRVKKVWKPQLLQRELYSEILDTKFAVTVTARTLDLIDAAY 140 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + +E+L S L+ +L +++ + Sbjct: 141 GFDFYILKTPEEDLCSKFGMDLKRGMLLRLARQ 173 >gi|51873998|gb|AAH80753.1| Mrpl28 protein [Mus musculus] Length = 258 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + ++ G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 76 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 135 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 136 IDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 173 >gi|26787989|ref|NP_077189.2| 39S ribosomal protein L28, mitochondrial precursor [Mus musculus] gi|85695427|sp|Q9D1B9|RM28_MOUSE RecName: Full=39S ribosomal protein L28, mitochondrial; Short=L28mt; Short=MRP-L28; Flags: Precursor gi|74190253|dbj|BAE37227.1| unnamed protein product [Mus musculus] gi|148690541|gb|EDL22488.1| mitochondrial ribosomal protein L28 [Mus musculus] gi|148877513|gb|AAI45681.1| Mitochondrial ribosomal protein L28 [Mus musculus] gi|148877515|gb|AAI45683.1| Mitochondrial ribosomal protein L28 [Mus musculus] Length = 257 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + ++ G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 75 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 172 >gi|302689635|ref|XP_003034497.1| hypothetical protein SCHCODRAFT_37408 [Schizophyllum commune H4-8] gi|300108192|gb|EFI99594.1| hypothetical protein SCHCODRAFT_37408 [Schizophyllum commune H4-8] Length = 96 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 KT GN V H+ KTRR +LPN+ T+ S+ + +L+I+ A+R+V++ GGLD + Sbjct: 21 GKTKRYGNNVPHSMQKTRRTWLPNIRSKTMHSESLG-LMKLKITTTAMRAVKKMGGLDDY 79 Query: 69 LSNSKKENLSARMRTLR 85 + + L LR Sbjct: 80 VLRTPTRKLGQLGIGLR 96 >gi|52790424|gb|AAH05797.2| Mrpl28 protein [Mus musculus] gi|72679514|gb|AAI00323.1| Mrpl28 protein [Mus musculus] Length = 267 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + ++ G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 85 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 144 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 145 IDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 182 >gi|66350944|emb|CAI95596.1| mitochondrial ribosomal protein L28 [Homo sapiens] Length = 218 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|148242482|ref|YP_001227639.1| 50S ribosomal protein L28 [Synechococcus sp. RCC307] gi|166228168|sp|A5GTS7|RL28_SYNR3 RecName: Full=50S ribosomal protein L28 gi|147850792|emb|CAK28286.1| 50S ribosomal protein L28 [Synechococcus sp. RCC307] Length = 78 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+L+ K +G VSH++ +T++ NL + L + +LR+S ALR+++ Sbjct: 1 MSRVCQLSGKRANNGMAVSHSHVRTKKLQQVNLQQRRLWWAEGNRWVKLRVSTSALRTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + + L + + Sbjct: 61 KKG------LGAYAKELGINLAKI 78 >gi|238063057|ref|ZP_04607766.1| 50S ribosomal protein L28 [Micromonospora sp. ATCC 39149] gi|237884868|gb|EEP73696.1| 50S ribosomal protein L28 [Micromonospora sp. ATCC 39149] Length = 78 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN VSH++ +TRRR+ PNL + L ++ AL++V+ Sbjct: 1 MSRRCDVTGAKPSFGNAVSHSHRRTRRRWNPNLQNHRFWLPSQRRWVSLTLTAKALKTVD 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|212702573|ref|ZP_03310701.1| hypothetical protein DESPIG_00597 [Desulfovibrio piger ATCC 29098] gi|212674014|gb|EEB34497.1| hypothetical protein DESPIG_00597 [Desulfovibrio piger ATCC 29098] Length = 104 Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C+ K GN VSH+N KT+RRF PNL R+ L + LRS Sbjct: 35 MSKECDFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQF-ADGTVRTLTVCTRCLRS 91 >gi|26324321|dbj|BAB22962.2| unnamed protein product [Mus musculus] Length = 270 Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + ++ G + ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 88 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 147 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 148 IDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 185 >gi|332239948|ref|XP_003269153.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Nomascus leucogenys] Length = 256 Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|88802661|ref|ZP_01118188.1| ribosomal protein L28 [Polaribacter irgensii 23-P] gi|88781519|gb|EAR12697.1| ribosomal protein L28 [Polaribacter irgensii 23-P] Length = 79 Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K M GN VS A N+T+R+F NL ++ L++S AL+++ Sbjct: 1 MSRVCELTGKKAMVGNNVSKALNRTKRKFDANLMTKRFFIPEEDKWITLKVSASALKNIN 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|116328129|ref|YP_797849.1| 50S ribosomal protein L28 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331418|ref|YP_801136.1| 50S ribosomal protein L28 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280837|sp|Q04RU2|RL28_LEPBJ RecName: Full=50S ribosomal protein L28 gi|122284079|sp|Q051S9|RL28_LEPBL RecName: Full=50S ribosomal protein L28 gi|116120873|gb|ABJ78916.1| 50S Ribosomal protein L28 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125107|gb|ABJ76378.1| 50S Ribosomal protein L28 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 94 Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+T + +SGN VSH++ KTRR + NL + + + + +R+S ALR++ Sbjct: 1 MARRCEVTGRGTVSGNNVSHSHIKTRRTWKVNLIKKRIFLEDENRWVTIRLSTRALRTLR 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|317154495|ref|YP_004122543.1| 50S ribosomal protein L28 [Desulfovibrio aespoeensis Aspo-2] gi|316944746|gb|ADU63797.1| ribosomal protein L28 [Desulfovibrio aespoeensis Aspo-2] Length = 70 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VC++ K SGN VSH++ KT+RRF+PNL ++ + Q ++ +R Sbjct: 1 MSQVCDICGKGPQSGNNVSHSHIKTKRRFMPNLQKVRHQLES-GQVVSVKACTRCIR 56 >gi|326428826|gb|EGD74396.1| hypothetical protein PTSG_06407 [Salpingoeca sp. ATCC 50818] Length = 149 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S+ K ++ G K S +R+ PN+ + S I+E+K +++++ LR +++ Sbjct: 16 SQRQLWGGKKIIFGVKSSDDKKSPIKRWEPNVISKNVYSHILEKKIKVKMTTRVLRCIDK 75 Query: 62 QGGLDRFLSNSKKENLSARMRTLRSQILKKMSEK 95 G D ++ +K S +++Q++ + +K Sbjct: 76 AGSFDNYILKAKNLE-SQLGEDIKAQMVAALEKK 108 >gi|145595377|ref|YP_001159674.1| ribosomal protein L28 [Salinispora tropica CNB-440] gi|145304714|gb|ABP55296.1| LSU ribosomal protein L28P [Salinispora tropica CNB-440] Length = 78 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN VSH++ +TRRR+ PNL + L ++ AL++V+ Sbjct: 1 MSRRCDVTGAKPSFGNAVSHSHRRTRRRWNPNLQNHRYWLPSERRWVSLTLTAKALKTVD 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|317503232|ref|ZP_07961290.1| 50S ribosomal protein L28 [Prevotella salivae DSM 15606] gi|315665645|gb|EFV05254.1| 50S ribosomal protein L28 [Prevotella salivae DSM 15606] Length = 87 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L++S LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEESCWISLKVSAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|318041480|ref|ZP_07973436.1| 50S ribosomal protein L28 [Synechococcus sp. CB0101] Length = 78 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ +T++ NL L + +LR+S AL++++ Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHVRTKKLQQVNLQERRLWWAEGNRFVKLRVSTRALKTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + + L + + Sbjct: 61 KKG------LGAYAKELGINLAKI 78 >gi|317969928|ref|ZP_07971318.1| 50S ribosomal protein L28 [Synechococcus sp. CB0205] Length = 78 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ +T++ NL L + +LR+S AL++++ Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHIRTKKLQQVNLQERRLWWAEGNRYVKLRVSTRALKTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + + L + + Sbjct: 61 KKG------LGAYAKQLGINLAKI 78 >gi|298385681|ref|ZP_06995239.1| ribosomal protein L28 [Bacteroides sp. 1_1_14] gi|298261822|gb|EFI04688.1| ribosomal protein L28 [Bacteroides sp. 1_1_14] Length = 86 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GN VSH+ +T+R F NL + L + LR + Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRNFDLNLFNKKFYYVEQDCWISLSLCANGLRIIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G LD L+++ + Sbjct: 61 KKG-LDAALNDAVAK 74 >gi|255724426|ref|XP_002547142.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135033|gb|EER34587.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 266 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS---KKE 75 S NKT R PN L S+ + +K +L+++ L+++ ++GGLD +L S + + Sbjct: 106 SEFLNKTLRSHKPNAVWTKLWSETLNKKLRLKVAVKVLKTISKEGGLDAYLLKSTPGRIK 165 Query: 76 NLSARMRTLRSQILKKMSEK 95 + + LR ++L+ +K Sbjct: 166 TMGLKAWQLRYELLQAQEQK 185 >gi|333022771|ref|ZP_08450835.1| putative ribosomal protein L28 [Streptomyces sp. Tu6071] gi|332742623|gb|EGJ73064.1| putative ribosomal protein L28 [Streptomyces sp. Tu6071] Length = 78 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT GN+VS+++ +T RRF PN+ R + +L +S +++V+ Sbjct: 1 MSAHCQLTGSKPAFGNRVSNSHRRTSRRFDPNIQRKRYWLPSEGRYVRLVLSAKGIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|312130145|ref|YP_003997485.1| lsu ribosomal protein l28p [Leadbetterella byssophila DSM 17132] gi|311906691|gb|ADQ17132.1| LSU ribosomal protein L28P [Leadbetterella byssophila DSM 17132] Length = 79 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 44/78 (56%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC+++ K +GN VSHANNK +R+F PNL + +L+++ +R++ Sbjct: 1 MSKVCQISGKRTRTGNHVSHANNKVKRKFYPNLKTKKFFLESEGVWVELKVATSVIRTIN 60 Query: 61 RQGGLDRFLSNSKKENLS 78 + G L ++K LS Sbjct: 61 KNGLEKTILKAARKGTLS 78 >gi|254523115|ref|ZP_05135170.1| ribosomal protein L28 [Stenotrophomonas sp. SKA14] gi|219720706|gb|EED39231.1| ribosomal protein L28 [Stenotrophomonas sp. SKA14] Length = 67 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 +GN VSHANNKTRRRFLPNL + +LR+S ALR++++ G +D L+ Sbjct: 2 QTGNNVSHANNKTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNG-IDSVLAEL 60 Query: 73 KKE 75 + Sbjct: 61 RAR 63 >gi|294656483|ref|XP_458758.2| DEHA2D06842p [Debaryomyces hansenii CBS767] gi|199431508|emb|CAG86902.2| DEHA2D06842p [Debaryomyces hansenii] Length = 269 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S + NK+ R PN+ + L S+ + + R+S LR++ R+GGLD +L ++ + Sbjct: 110 SESKNKSLRAHKPNIVKAKLWSETLNKTIATRVSTTVLRTITREGGLDNYLLKDKPARVK 169 Query: 76 NLSARMRTLRSQILKKMS 93 + + L+ I+KK Sbjct: 170 TMGLKGWNLKYDIMKKQE 187 >gi|194219444|ref|XP_001915458.1| PREDICTED: similar to mitochondrial ribosomal protein L28 [Equus caballus] Length = 258 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 46/93 (49%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANNKTRRR---FLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + ++R + P L + L S+I++ K+ + ++ L ++ Sbjct: 80 WGGEGWILGHRYVNNDKLSKRVKNVWKPQLFQRELYSEILDTKFTVTVTMRTLDLIDEAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPKEDLCSKFGMDLKRGMLLRLARR 172 >gi|183220423|ref|YP_001838419.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910536|ref|YP_001962091.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226732831|sp|B0SEH0|RL28_LEPBA RecName: Full=50S ribosomal protein L28 gi|226732832|sp|B0SMJ9|RL28_LEPBP RecName: Full=50S ribosomal protein L28 gi|167775212|gb|ABZ93513.1| 50S Ribosomal protein L28 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778845|gb|ABZ97143.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 96 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C +T K +GN VSH++ K RR + N+ + + + +++IS ALR++ Sbjct: 1 MARTCVVTGKGTTAGNNVSHSHKKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|295698711|ref|YP_003603366.1| ribosomal protein L28 [Candidatus Riesia pediculicola USDA] gi|291157260|gb|ADD79705.1| ribosomal protein L28 [Candidatus Riesia pediculicola USDA] Length = 81 Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+CE+T K GN SH+ N T+RRFLPNL + ++ +LRIS +R +E Sbjct: 1 MSRICEITGKKSTKGNHRSHSMNATKRRFLPNLHYHKFWIEKEKRFVRLRISAKGVRIIE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|288802432|ref|ZP_06407871.1| 50S ribosomal protein L28 [Prevotella melaninogenica D18] gi|302346522|ref|YP_003814820.1| ribosomal protein L28 [Prevotella melaninogenica ATCC 25845] gi|288334960|gb|EFC73396.1| 50S ribosomal protein L28 [Prevotella melaninogenica D18] gi|302151106|gb|ADK97367.1| ribosomal protein L28 [Prevotella melaninogenica ATCC 25845] Length = 87 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL QL+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEACWIQLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALKQAVSK 74 >gi|66350942|emb|CAI95595.1| mitochondrial ribosomal protein L28 [Homo sapiens] Length = 256 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + E+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQ 172 >gi|294791346|ref|ZP_06756503.1| ribosomal protein L28 [Scardovia inopinata F0304] gi|294457817|gb|EFG26171.1| ribosomal protein L28 [Scardovia inopinata F0304] Length = 64 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G VSH++ + +RRFLPNL + D + +LR+ L+ Sbjct: 1 MAARCDVCGKGPQVGYSVSHSHIRNKRRFLPNLQAVHTTVD--GRNVRLRVCTSCLK 55 >gi|91215245|ref|ZP_01252217.1| 50S ribosomal protein L28 [Psychroflexus torquis ATCC 700755] gi|91186850|gb|EAS73221.1| 50S ribosomal protein L28 [Psychroflexus torquis ATCC 700755] Length = 79 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT K MSGN VS A N+TRR+F NL + ++ L++S L+++ Sbjct: 1 MSRVCELTGKRAMSGNNVSKALNRTRRKFSVNLVKKRFYIPGEDKWITLKVSTSILKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L +++ + Sbjct: 61 KKG-IHAVLKDARAK 74 >gi|324522525|gb|ADY48074.1| 39S ribosomal protein L28 [Ascaris suum] Length = 305 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 8/89 (8%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 TKK V+ + V H + P L ++ L S+I+++ ++ +++ A R +++ G+D Sbjct: 118 TKKKVLPRHWVPH-------LWFPYLKQVVLYSEILDRYMKITVTERACRLIDKHFGIDF 170 Query: 68 FLSNSKKENL-SARMRTLRSQILKKMSEK 95 +L + + ++ S L+ +IL ++++ Sbjct: 171 YLLETPEIDIASKLGNKLKREILIALAKE 199 >gi|123243689|emb|CAM26404.1| mitochondrial ribosomal protein L28 [Homo sapiens] Length = 194 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|254281533|ref|ZP_04956501.1| ribosomal protein L28 [gamma proteobacterium NOR51-B] gi|219677736|gb|EED34085.1| ribosomal protein L28 [gamma proteobacterium NOR51-B] Length = 72 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 T K ++GN VSHA N+TRRRFLPNL + + LR+S +R ++++G Sbjct: 2 TGKRPITGNNVSHAKNRTRRRFLPNLHNHRFWVESENRFVTLRVSSKGMRVIDKRG---- 57 Query: 68 FLSNSKKENLSARMRT 83 + L AR Sbjct: 58 --IETVLAELRARGEK 71 >gi|67461390|sp|Q6AML3|RL28_DESPS RecName: Full=50S ribosomal protein L28 Length = 64 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VCE+ K ++GN VSHA+NKTRRR+LPNL ++ + + ++ +RS Sbjct: 1 MAKVCEICGKGPITGNNVSHAHNKTRRRWLPNLKKVRM-VTASGATVRGKVCTRCIRS 57 >gi|85859469|ref|YP_461671.1| 50S ribosomal protein L28 [Syntrophus aciditrophicus SB] gi|123516639|sp|Q2LTU0|RL28_SYNAS RecName: Full=50S ribosomal protein L28 gi|85722560|gb|ABC77503.1| ribosomal protein L28 [Syntrophus aciditrophicus SB] Length = 65 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR+C++ K + GN VSHANNKT++ + PNL + + ++++ LRS Sbjct: 1 MSRICDVCGKGPVVGNNVSHANNKTKKVWYPNLQSLRCLDGKTGAVKRMKVCTRCLRS 58 >gi|220906054|ref|YP_002481365.1| 50S ribosomal protein L28 [Cyanothece sp. PCC 7425] gi|254801354|sp|B8HUV7|RL28_CYAP4 RecName: Full=50S ribosomal protein L28 gi|219862665|gb|ACL43004.1| ribosomal protein L28 [Cyanothece sp. PCC 7425] Length = 78 Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K + VSH++ +T++ NL + ++ +LR+S AL+++E Sbjct: 1 MSRVCQLTGKRANNAYAVSHSHRRTKKLQEVNLQWKRIWWPQGKRWVRLRLSTKALKTLE 60 Query: 61 RQGGLDRF 68 +G LD F Sbjct: 61 HKG-LDSF 67 >gi|260904561|ref|ZP_05912883.1| 50S ribosomal protein L28 [Brevibacterium linens BL2] Length = 78 Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C++T G+ VSH+ T+RRF PN+ + + + L +S ++ ++ Sbjct: 1 MAANCQVTGAVPGFGHNVSHSKRTTKRRFNPNIQKKRYFVPSLRRSVTLNLSAKGIKVID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 +G +D + L A+ L Sbjct: 61 VRG-IDAVV-----GELIAKGVKL 78 >gi|281422460|ref|ZP_06253459.1| 50S ribosomal protein L28 [Prevotella copri DSM 18205] gi|281403523|gb|EFB34203.1| 50S ribosomal protein L28 [Prevotella copri DSM 18205] Length = 87 Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL L+IS LR + Sbjct: 1 MSKICQITGKKAQLGCNVSHSKHRTKRSFDVNLFSKKFYYVEEGCWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L+ + K+ Sbjct: 61 KVG-LDAALNQAVKK 74 >gi|282896999|ref|ZP_06305001.1| Ribosomal protein L28 [Raphidiopsis brookii D9] gi|282900464|ref|ZP_06308413.1| Ribosomal protein L28 [Cylindrospermopsis raciborskii CS-505] gi|281194657|gb|EFA69605.1| Ribosomal protein L28 [Cylindrospermopsis raciborskii CS-505] gi|281197651|gb|EFA72545.1| Ribosomal protein L28 [Raphidiopsis brookii D9] Length = 78 Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + VSH++ +TRR PNL + + +L++S A+++++ Sbjct: 1 MSRRCELTGKKANNAMSVSHSHRRTRRLQQPNLQTKRVWWPAGNRWVKLKLSTKAIKTLD 60 Query: 61 RQG 63 +G Sbjct: 61 TKG 63 >gi|32423706|gb|AAP81249.1| ribosomal protein L28 [Candidatus Portiera aleyrodidarum] Length = 71 Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C++T K M GN VSH++ KTRRRF+PNL + ++ ++ I+ +R ++ Sbjct: 1 MTKRCQITYKKPMQGNNVSHSHRKTRRRFMPNLQKHRFWIKKEKRYIKMHITTKGMRIID 60 Query: 61 RQGGLDRFLSNS 72 + G +++ L + Sbjct: 61 KYG-IEKVLIKT 71 >gi|311251699|ref|XP_003124744.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Sus scrofa] Length = 256 Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + + R+ + P L + L S+I+++++ + ++ L +++ Sbjct: 80 WGGEGWVLGHRYVNNDKLSKRVRKVWKPQLFQRELYSEILDKRFTVTVTMRTLDLIDQAC 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|326329684|ref|ZP_08196005.1| ribosomal protein L28 [Nocardioidaceae bacterium Broad-1] gi|325952449|gb|EGD44468.1| ribosomal protein L28 [Nocardioidaceae bacterium Broad-1] Length = 78 Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T GN + TRRR+ NL + T + +K LR+S A++ ++ Sbjct: 1 MSRTCQVTGARPGFGNNRPWSKKATRRRWEVNLQKKTYYVPSLGRKVTLRLSTNAIKQID 60 Query: 61 RQGGLDRFLSN 71 +G +D ++ Sbjct: 61 VRG-IDAVVAE 70 >gi|256827890|ref|YP_003156618.1| 50S riboosomal protein L28 [Desulfomicrobium baculatum DSM 4028] gi|256577066|gb|ACU88202.1| ribosomal protein L28 [Desulfomicrobium baculatum DSM 4028] Length = 66 Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC++ K GN VSHANNKT+RRF+PNL + + ++++ +RS Sbjct: 1 MSKVCDICGKGPQVGNNVSHANNKTKRRFMPNLQSVRAQLKS-GEVKRMKVCTQCIRS 57 >gi|302899398|ref|XP_003048042.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728974|gb|EEU42329.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 262 Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVS-HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN V+ NNK RR + PN+ + ++ + R++ L+++ R+GGL +L Sbjct: 73 RIRFGNTVAEKYNNKARRFWRPNVHVKSFHLPAVDANVKTRLTLRVLKTIRREGGLQEYL 132 Query: 70 SNSKK---ENLSARMRTLRSQILKK 91 SK + L LR +++ Sbjct: 133 LKSKPARLKELGPGGWNLRWLLMQS 157 >gi|19112705|ref|NP_595913.1| mitochondrial ribosomal protein subunit L28 [Schizosaccharomyces pombe 972h-] gi|74626794|sp|O60091|RM24_SCHPO RecName: Full=60S ribosomal protein L24, mitochondrial; Flags: Precursor gi|3006168|emb|CAA18428.1| mitochondrial ribosomal protein subunit L28 [Schizosaccharomyces pombe] Length = 176 Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 4/92 (4%) Query: 9 KKTVMSGNK-VSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 +GN + +KTRR ++PN L S+++E+K+ L ++ LR+++++GGLD Sbjct: 34 GSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRTIDKEGGLDE 93 Query: 68 FLSN---SKKENLSARMRTLRSQILKKMSEKS 96 +L S+ ++L R LR+ +L K+ K+ Sbjct: 94 YLVKSTPSRLKSLGLRGVELRALVLHKLGAKN 125 >gi|302416479|ref|XP_003006071.1| 54S ribosomal protein L24 [Verticillium albo-atrum VaMs.102] gi|261355487|gb|EEY17915.1| 54S ribosomal protein L24 [Verticillium albo-atrum VaMs.102] Length = 259 Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 11 TVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 + GN +S + KT R + PN+ R L S + + R+S LR++ ++GGLD ++ Sbjct: 77 RIRRGNNISSDHKVKTPRAWRPNIHRKRLWSAALGVWVRARLSLRVLRTIRKEGGLDAYV 136 Query: 70 SNSKKE 75 Sbjct: 137 LKRPPC 142 >gi|126335267|ref|XP_001365154.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Monodelphis domestica] Length = 253 Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G + ++ + + R+ + P+L L S+I+++K++ ++ L Sbjct: 75 SQRGLWGGEGWIRGYRYTNNDKLSKRVRKTWKPHLYERELYSEILDKKFKTMVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 135 IDEAYGFDFYILKTPKEDLCSKFGMDLKRGMLLRLARR 172 >gi|116074818|ref|ZP_01472079.1| 50S ribosomal protein L28 [Synechococcus sp. RS9916] gi|116068040|gb|EAU73793.1| 50S ribosomal protein L28 [Synechococcus sp. RS9916] Length = 78 Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L + +LR++ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWVKLRVTTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|21672371|ref|NP_660438.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009086|sp|Q8KA33|RL28_BUCAP RecName: Full=50S ribosomal protein L28 gi|21622976|gb|AAM67649.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 78 Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T+K M GN SHA N +R+FLPN+ ++ +LRIS +R ++ Sbjct: 1 MSRICQVTRKKRMIGNNRSHAMNAKKRQFLPNIQYHRFWIPEEKRFIKLRISAHGMRCID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|226365090|ref|YP_002782873.1| 50S ribosomal protein L28 [Rhodococcus opacus B4] gi|226243580|dbj|BAH53928.1| 50S ribosomal protein L28 [Rhodococcus opacus B4] Length = 78 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ +T RR+ PN+ + T + ++ L +S +++V+ Sbjct: 1 MSAHCQVTGRKPGFGKSVSHSHKRTNRRWDPNIQKKTYLLPSEGRRITLTLSAKGIKTVD 60 Query: 61 RQGGLDRFLSNSKKE 75 R G ++ ++ + Sbjct: 61 RDG-IEAVVARIRAR 74 >gi|56758908|gb|AAW27594.1| SJCHGC01033 protein [Schistosoma japonicum] gi|226482518|emb|CAX73858.1| 39S ribosomal protein L28, mitochondrial precursor [Schistosoma japonicum] gi|226482520|emb|CAX73859.1| 39S ribosomal protein L28, mitochondrial precursor [Schistosoma japonicum] Length = 260 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 2 SRVCELTKKTVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 S+ C + ++ G K + + P L S+I+++ + +S AL+ +E Sbjct: 69 SQKCLWGGEGIIQGYWEKKNQRPKFPKAWRPVLMENLFYSEILDRWMVIIVSDSALKQIE 128 Query: 61 RQGGLDRFLSNSKKENLSAR-MRTLRSQILKKMSE 94 GG D ++ ++ + L +R L+ +L +++ Sbjct: 129 NAGGFDFYILSTPQSKLKSRLGMHLKRDMLVTLAK 163 >gi|83814500|ref|YP_444179.1| ribosomal protein L28 [Salinibacter ruber DSM 13855] gi|123529898|sp|Q2S6K2|RL28_SALRD RecName: Full=50S ribosomal protein L28 gi|83755894|gb|ABC44007.1| ribosomal protein L28 [Salinibacter ruber DSM 13855] Length = 78 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R ++T + ++GN VS +N KT RRF NL ++ +L++S L+++ Sbjct: 1 MARKDDVTGEGPVTGNSVSDSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 ++G + L ++K+ Sbjct: 61 KKG-IQAVLEEARKQ 74 >gi|78212935|ref|YP_381714.1| 50S ribosomal protein L28 [Synechococcus sp. CC9605] gi|260434887|ref|ZP_05788857.1| ribosomal protein L28 [Synechococcus sp. WH 8109] gi|123578150|sp|Q3AJS3|RL28_SYNSC RecName: Full=50S ribosomal protein L28 gi|78197394|gb|ABB35159.1| ribosomal protein L28 [Synechococcus sp. CC9605] gi|260412761|gb|EEX06057.1| ribosomal protein L28 [Synechococcus sp. WH 8109] Length = 78 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L + +LR++ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWVKLRVTTRALKTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + ++L + + Sbjct: 61 KKG------LGAYAKSLGINLAKI 78 >gi|296083696|emb|CBI23685.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 43 RVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKN 102 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 103 G-LDAVAKKA 111 >gi|116793346|gb|ABK26715.1| unknown [Picea sitchensis] Length = 148 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC LT K + NKVS +N+KT++ NL + + ++ +LRIS AL+++E+ Sbjct: 72 SRVCPLTGKRANNANKVSFSNHKTKKLQGVNLQYKRIWWEAGKRFVKLRISTKALKTIEK 131 Query: 62 QGGLDRFLSNS 72 +G LD + Sbjct: 132 KG-LDAMAKKA 141 >gi|194476650|ref|YP_002048829.1| 50S ribosomal protein L28 [Paulinella chromatophora] gi|171191657|gb|ACB42619.1| 50S ribosomal protein L28 [Paulinella chromatophora] Length = 78 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ +T++ NL L + +LRIS ALR+++ Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHIRTKKLQQVNLQARRLWWTEGNRWIKLRISTRALRTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|332707891|ref|ZP_08427904.1| LSU ribosomal protein L28P [Lyngbya majuscula 3L] gi|332353331|gb|EGJ32858.1| LSU ribosomal protein L28P [Lyngbya majuscula 3L] Length = 78 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K +G VSH++ +T+R NL + + ++ +LRIS A+++++ Sbjct: 1 MSRRCQLTGKKANNGYAVSHSHRRTKRLQNVNLQVKRVWWEEGKRWVKLRISTKAIKTLQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|126133881|ref|XP_001383465.1| hypothetical protein PICST_43496 [Scheffersomyces stipitis CBS 6054] gi|126095614|gb|ABN65436.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 266 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSK---KE 75 S + NK R LPN+ + L S+ +++ +++S L+++ ++GGLD +L+ +K ++ Sbjct: 106 SESGNKGLRVHLPNIQKTKLWSETLQKSIPIKVSTKVLKTITKEGGLDNYLTKNKPSREK 165 Query: 76 NLSARMRTLRSQILK 90 L + LR Q+LK Sbjct: 166 TLGLKGWQLRYQVLK 180 >gi|108801694|ref|YP_641891.1| 50S ribosomal protein L28 [Mycobacterium sp. MCS] gi|119870845|ref|YP_940797.1| 50S ribosomal protein L28 [Mycobacterium sp. KMS] gi|126437680|ref|YP_001073371.1| 50S ribosomal protein L28 [Mycobacterium sp. JLS] gi|108772113|gb|ABG10835.1| LSU ribosomal protein L28P [Mycobacterium sp. MCS] gi|119696934|gb|ABL94007.1| LSU ribosomal protein L28P [Mycobacterium sp. KMS] gi|126237480|gb|ABO00881.1| LSU ribosomal protein L28P [Mycobacterium sp. JLS] Length = 78 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T ++ GN+VSH++ +TRRR+ PN+ T ++ LR+S ++ ++ Sbjct: 1 MSAHCQVTGRSPGFGNRVSHSHRRTRRRWRPNIQTKTYYVPSEGRRVTLRVSAKGIKVID 60 Query: 61 RQGGLDRFLSNSK 73 R G +D L+ + Sbjct: 61 RDG-IDAVLARIR 72 >gi|288801234|ref|ZP_06406689.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 299 str. F0039] gi|288331845|gb|EFC70328.1| 50S ribosomal protein L28 [Prevotella sp. oral taxon 299 str. F0039] Length = 87 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL + L+IS LR + Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFKKKFYYVEEACWISLKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDAALRQAVSK 74 >gi|254491381|ref|ZP_05104560.1| ribosomal protein L28 [Methylophaga thiooxidans DMS010] gi|224462859|gb|EEF79129.1| ribosomal protein L28 [Methylophaga thiooxydans DMS010] Length = 66 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN VSHA+NKT+RRFLPNL + + + +LR+S LR ++++G +D L++ Sbjct: 1 MSGNNVSHAHNKTKRRFLPNLHSHRIWVESENRWVKLRVSNHGLRIIDKKG-IDAVLTDM 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|62858289|ref|NP_001016451.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis] gi|213624104|gb|AAI70649.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis] gi|213627055|gb|AAI70655.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis] Length = 254 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 46/93 (49%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + ++G + ++ + + ++ + P L L S+I+++ + + ++ L ++ Sbjct: 80 WGGEGWVTGYRYANNDKLSARVKKVWKPQLFTRELHSEILDKTFSITVTMRTLDLIDAAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDFYILKTPKEDLNSKFGMDLKRAMLMRLASR 172 >gi|255642185|gb|ACU21357.1| unknown [Glycine max] Length = 136 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 61 RVCPFTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKALKTIEKN 120 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 121 G-LDAVAKKA 129 >gi|328774136|gb|EGF84173.1| hypothetical protein BATDEDRAFT_21979 [Batrachochytrium dendrobatidis JAM81] Length = 185 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 10 KTVMSGNKVSHA-NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K + G +VS A N++RR + PN+ I+L S ++ RIS ALR ++ +GG D + Sbjct: 49 KKITFGEQVSEAGKNRSRRVWYPNVQYISLYSRALDMNIWTRISTAALREIDHKGGFDEY 108 Query: 69 LSNSKKENLSARMRTLRSQILKKMSEKSS 97 + + + L + + + K + ++ Sbjct: 109 IISVADKLLPCEIAKMYRDRILKQYDANT 137 >gi|94265179|ref|ZP_01288941.1| Ribosomal protein L28 [delta proteobacterium MLMS-1] gi|93454320|gb|EAT04627.1| Ribosomal protein L28 [delta proteobacterium MLMS-1] Length = 64 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS++CE+ K GN +SHA+NKTRRR+LPNL ++ + ++++ LRS Sbjct: 1 MSKICEVCGKKPEVGNNISHAHNKTRRRWLPNLQQVRVA-GAGGNSRRVKVCTRCLRS 57 >gi|145221904|ref|YP_001132582.1| ribosomal protein L28 [Mycobacterium gilvum PYR-GCK] gi|315446360|ref|YP_004079239.1| 50S ribosomal protein L28P [Mycobacterium sp. Spyr1] gi|145214390|gb|ABP43794.1| LSU ribosomal protein L28P [Mycobacterium gilvum PYR-GCK] gi|315264663|gb|ADU01405.1| LSU ribosomal protein L28P [Mycobacterium sp. Spyr1] Length = 78 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ +TRRR+ PN+ R T ++ LR+S ++ ++ Sbjct: 1 MSAHCQVTGRKPGFGNAVSHSHRRTRRRWDPNIQRKTYYLPSEGRRITLRVSTKGIKIID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|301769583|ref|XP_002920238.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Ailuropoda melanoleuca] Length = 256 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + + ++ + P L + L S+I++ K+ + +++ L ++ Sbjct: 80 WGGEGWILGHRYINNDKLSKRVKKVWKPQLFQRELYSEILDTKFTVTVTQRTLDLIDEAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDLYILKTPKEDLCSKFGMDLKRGMLLRLARQ 172 >gi|50546210|ref|XP_500626.1| YALI0B08074p [Yarrowia lipolytica] gi|49646492|emb|CAG82867.1| YALI0B08074p [Yarrowia lipolytica] Length = 299 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 +T+ +G + S NKT R++ PN + TL S+ + + ++ L ++ R+GGLD + Sbjct: 92 GRTLGNGYRSSEFRNKTLRKWKPNAQKTTLPSEALGKNVRITTVPRVLSTIRREGGLDAY 151 Query: 69 LSNS---KKENLSARMRTLRSQILKK 91 L+ + + + LR +IL Sbjct: 152 LTKDTPLRIKEIGVFGWNLRHKILSA 177 >gi|225433211|ref|XP_002285387.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 146 Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 71 RVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKN 130 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 131 G-LDAVAKKA 139 >gi|299139061|ref|ZP_07032237.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX8] gi|298598741|gb|EFI54903.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX8] Length = 62 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VCEL K GN +SHA+N TRRR+ PNL + +++ ++++ +++ Sbjct: 1 MAQVCELCGKGPQFGNNISHAHNVTRRRWNPNLQSVKALTN--GATKRVKVCTSCIKT 56 >gi|255575833|ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus communis] gi|223531726|gb|EEF33548.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus communis] Length = 143 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 68 RVCPFTGKKANRANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKN 127 Query: 63 GGLDRFLSNSKKENLSAR 80 G LD + +LS + Sbjct: 128 G-LDAVAKKAGI-DLSKK 143 >gi|148229105|ref|NP_001087550.1| 39S ribosomal protein L28, mitochondrial precursor [Xenopus laevis] gi|82181742|sp|Q68EV6|RM28_XENLA RecName: Full=39S ribosomal protein L28, mitochondrial; Short=L28mt; Short=MRP-L28; Flags: Precursor gi|51261504|gb|AAH80094.1| MGC84279 protein [Xenopus laevis] Length = 253 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 50/100 (50%), Gaps = 4/100 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 + + ++G ++ + + ++ + P L + L S+I+++K+ + ++ L Sbjct: 75 ANKGLWGGEGWVTGYHYANNDKLSARVKKVWKPQLFKRELYSEILDKKFSITVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSKKENLSAR-MRTLRSQILKKMSEKSS 97 ++ G D ++ + KE+L+++ + +L +++ K S Sbjct: 135 IDAAYGFDFYILKTPKEDLNSKVGMDFKRAMLMRLASKDS 174 >gi|118489930|gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] Length = 153 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 78 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKN 137 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 138 G-LDAVAKKA 146 >gi|302538030|ref|ZP_07290372.1| ribosomal protein L28 [Streptomyces sp. C] gi|302446925|gb|EFL18741.1| ribosomal protein L28 [Streptomyces sp. C] Length = 78 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 32/63 (50%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+L G +SH++ +T RRF PN+ + +L++S A+++V+ Sbjct: 1 MSAHCQLIGAQPGFGKNISHSHRRTSRRFDPNIQSKRYWLPSEGRHVRLKLSAKAIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 VIG 63 >gi|218195912|gb|EEC78339.1| hypothetical protein OsI_18082 [Oryza sativa Indica Group] Length = 213 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 138 RICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEGKRFVKLRLSTKALKTIEKH 197 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 198 G-LDAVAKKA 206 >gi|193212242|ref|YP_001998195.1| 50S ribosomal protein L28 [Chlorobaculum parvum NCIB 8327] gi|226738049|sp|B3QM42|RL28_CHLP8 RecName: Full=50S ribosomal protein L28 gi|193085719|gb|ACF10995.1| ribosomal protein L28 [Chlorobaculum parvum NCIB 8327] Length = 72 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN TR RF PNL + + ++ ++R+S A++ + Sbjct: 1 MSKVCVLTGKKPKYGNNVSHANNHTRTRFEPNLHTKRIWIEEEKRWVKVRVSAKAMKIMS 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|226493229|ref|NP_001149595.1| 50S ribosomal protein L28 [Zea mays] gi|223948777|gb|ACN28472.1| unknown [Zea mays] Length = 141 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 66 RVCPFTGKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEAGKRFVKLRLSTKALKTIEKH 125 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 126 G-LDAVARKA 134 >gi|258648345|ref|ZP_05735814.1| ribosomal protein L28 [Prevotella tannerae ATCC 51259] gi|260851510|gb|EEX71379.1| ribosomal protein L28 [Prevotella tannerae ATCC 51259] Length = 86 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C+LT K M GN VS + +T+R F NL E LRIS LR + Sbjct: 1 MSKICQLTGKKAMIGNNVSKSKRRTKRSFDVNLFTKKFYYVEQECWVSLRISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L+++ ++ Sbjct: 61 KVG-LDAALNSAVEK 74 >gi|78184654|ref|YP_377089.1| 50S ribosomal protein L28 [Synechococcus sp. CC9902] gi|116070521|ref|ZP_01467790.1| 50S ribosomal protein L28 [Synechococcus sp. BL107] gi|123581534|sp|Q3AXY2|RL28_SYNS9 RecName: Full=50S ribosomal protein L28 gi|78168948|gb|ABB26045.1| LSU ribosomal protein L28P [Synechococcus sp. CC9902] gi|116065926|gb|EAU71683.1| 50S ribosomal protein L28 [Synechococcus sp. BL107] Length = 78 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L + +LR++ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWIKLRVTTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|242278141|ref|YP_002990270.1| ribosomal protein L28 [Desulfovibrio salexigens DSM 2638] gi|259646732|sp|C6BYE0|RL28_DESAD RecName: Full=50S ribosomal protein L28 gi|242121035|gb|ACS78731.1| ribosomal protein L28 [Desulfovibrio salexigens DSM 2638] Length = 70 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC++ K +GN VSHA+NKT+RRF+PNL ++ + ++ +RS Sbjct: 1 MSQVCDICGKGPQTGNNVSHAHNKTKRRFMPNLQKVRTQLPS-GEVKSIKACTRCIRS 57 >gi|195628336|gb|ACG35998.1| 50S ribosomal protein L28 [Zea mays] Length = 141 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 66 RVCPFTGKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEAGKRFVKLRLSTKALKTIEKH 125 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 126 G-LDAVARKA 134 >gi|72382145|ref|YP_291500.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. NATL2A] gi|124025685|ref|YP_001014801.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. NATL1A] gi|123621283|sp|Q46L31|RL28_PROMT RecName: Full=50S ribosomal protein L28 gi|166226599|sp|A2C226|RL28_PROM1 RecName: Full=50S ribosomal protein L28 gi|72001995|gb|AAZ57797.1| LSU ribosomal protein L28P [Prochlorococcus marinus str. NATL2A] gi|123960753|gb|ABM75536.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. NATL1A] Length = 78 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L + + +R++ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMSVSHSHIRTKKLQQANLQQRRLWWEEENKWINIRVTTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|400992|sp|P30956|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName: Full=CL28; Flags: Precursor gi|279656|pir||R5NT28 ribosomal protein L28 precursor, chloroplast - tobacco gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1| ribosomal protein CL28 [Nicotiana tabacum] Length = 151 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVSH+N+KT++ NL + + ++ +LR+S A++++E+ Sbjct: 76 RICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKN 135 Query: 63 GGLDRFLSNSKKENLSAR 80 G LD + +LS + Sbjct: 136 G-LDAVAKKAGI-DLSKK 151 >gi|256090758|ref|XP_002581348.1| hypothetical protein [Schistosoma mansoni] gi|238667217|emb|CAZ37587.1| conserved hypothetical protein [Schistosoma mansoni] Length = 248 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 2 SRVCELTKKTVMSGNKVSHANN-KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 S+ C + ++ G + + + P L S+I+++ + ++ AL+ +E Sbjct: 68 SQKCLWGGEGIIQGYWEKKNQKPRFPKTWSPVLMENLFHSEILDRWMIIIVTDSALKQIE 127 Query: 61 RQGGLDRFLSNSKKENLSAR-MRTLRSQILKKMSEK 95 + G D ++ ++ + L +R L+ +L +++ Sbjct: 128 KASGFDFYILSTPESKLKSRLGMHLKRDMLVTLAKA 163 >gi|27904585|ref|NP_777711.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31076932|sp|Q89AY8|RL28_BUCBP RecName: Full=50S ribosomal protein L28 gi|27903982|gb|AAO26816.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 74 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K ++GN SHA N T+RRF PNL + ++ LR+S +R+++ Sbjct: 1 MSKICQITGKKPITGNNRSHAMNATKRRFFPNLHFHKFWNPKTKRFIILRVSAKGMRNID 60 Query: 61 RQG 63 + G Sbjct: 61 KLG 63 >gi|22296189|dbj|BAC10013.1| 50S ribosomal protein L28 [Thermosynechococcus elongatus BP-1] Length = 104 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K + +SH++ +T++ NL + ++ +LR+S A++++E Sbjct: 27 MSRVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLE 86 Query: 61 RQG 63 R+G Sbjct: 87 RKG 89 >gi|260592535|ref|ZP_05857993.1| 50S ribosomal protein L28 [Prevotella veroralis F0319] gi|260535581|gb|EEX18198.1| 50S ribosomal protein L28 [Prevotella veroralis F0319] Length = 87 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K G VSH+ ++T+R F NL +L+IS LR + Sbjct: 1 MSKICQITGKKAQLGCNVSHSKHRTKRSFDVNLFSKKFYYVEESCWIELKISAAGLRLIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD L + + Sbjct: 61 KVG-LDVALKQAVSK 74 >gi|221109905|ref|XP_002156837.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 172 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 V SG + + KT+R + PN+ SD++ + + A+R+++ GG D Sbjct: 36 WHGAGVKSGFIETFSKKKTKRFWKPNVFEREYHSDLLNETVCYTFTMKAVRAIDYAGGFD 95 Query: 67 RFLSNSKKENL-SARMRTLRSQILKKM 92 ++ + L S L+ ++ Sbjct: 96 NYILRTPDNVLVSNAAIALKRKMETVQ 122 >gi|226307890|ref|YP_002767850.1| 50S ribosomal protein L28 [Rhodococcus erythropolis PR4] gi|226187007|dbj|BAH35111.1| 50S ribosomal protein L28 [Rhodococcus erythropolis PR4] Length = 78 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ ++ RR+ PN+ R T + ++ L +S +++++ Sbjct: 1 MSAHCQVTGRVPGFGKSVSHSHKRSNRRWNPNIQRKTYVLPSEGRRITLTLSTKGIKTID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|145224793|ref|YP_001135471.1| 50S ribosomal protein L28 [Mycobacterium gilvum PYR-GCK] gi|315445123|ref|YP_004078002.1| 50S ribosomal protein L28P [Mycobacterium sp. Spyr1] gi|145217279|gb|ABP46683.1| LSU ribosomal protein L28P [Mycobacterium gilvum PYR-GCK] gi|315263426|gb|ADU00168.1| LSU ribosomal protein L28P [Mycobacterium sp. Spyr1] Length = 64 Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VCE+ K G VSH++ +T RR+ PN+ + +S K ++ + L+ Sbjct: 1 MAAVCEICGKGPGFGKSVSHSHRRTSRRWNPNIQSVRAVSSPGGNKQRVNVCTSCLK 57 >gi|294787300|ref|ZP_06752553.1| ribosomal protein L28 [Parascardovia denticolens F0305] gi|294484656|gb|EFG32291.1| ribosomal protein L28 [Parascardovia denticolens F0305] Length = 64 Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G VSH++ + +RRFLPNL + D + +LR+ L+ Sbjct: 1 MAARCDVCGKGPQVGYSVSHSHLRNKRRFLPNLQAVRATVD--GETVRLRVCTSCLK 55 >gi|56751466|ref|YP_172167.1| 50S ribosomal protein L28 [Synechococcus elongatus PCC 6301] gi|81298853|ref|YP_399061.1| 50S ribosomal protein L28 [Synechococcus elongatus PCC 7942] gi|67461292|sp|Q5N223|RL28_SYNP6 RecName: Full=50S ribosomal protein L28 gi|123557676|sp|Q31S95|RL28_SYNE7 RecName: Full=50S ribosomal protein L28 gi|56686425|dbj|BAD79647.1| 50S ribosomal protein L28 [Synechococcus elongatus PCC 6301] gi|81167734|gb|ABB56074.1| LSU ribosomal protein L28P [Synechococcus elongatus PCC 7942] Length = 78 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K + +SH++ +T+R NL + + +LR+S A+++++ Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G ++ L ++ L Sbjct: 61 KKG------LSAYARELGIDLKRL 78 >gi|229495046|ref|ZP_04388792.1| ribosomal protein L28 [Rhodococcus erythropolis SK121] gi|229317977|gb|EEN83852.1| ribosomal protein L28 [Rhodococcus erythropolis SK121] Length = 78 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ ++ RR+ PN+ R T + ++ L +S +++++ Sbjct: 1 MSAHCQVTGRVPGFGKSVSHSHKRSNRRWNPNIQRKTYLLPSEGRRITLTLSTKGIKTID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|297848674|ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] gi|297338060|gb|EFH68477.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] Length = 137 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 62 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKN 121 Query: 63 GGLDRFLSNSKKENLSAR 80 G LD + +LS + Sbjct: 122 G-LDAVAKKAGI-DLSKK 137 >gi|224110604|ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1| predicted protein [Populus trichocarpa] Length = 118 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 43 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKN 102 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 103 G-LDAVAKKA 111 >gi|296171352|ref|ZP_06852708.1| 50S ribosomal protein L28 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894183|gb|EFG73941.1| 50S ribosomal protein L28 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 64 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 31/57 (54%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +++ + +L + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVHVVTRPGGNRQRLNVCTSCIK 57 >gi|328953946|ref|YP_004371280.1| 50S ribosomal protein L28 [Desulfobacca acetoxidans DSM 11109] gi|328454270|gb|AEB10099.1| 50S ribosomal protein L28 [Desulfobacca acetoxidans DSM 11109] Length = 63 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K GN VSHANNKT+RR+LPNL R+ + + + Q + LRS Sbjct: 1 MAKFCEICGKGPQVGNNVSHANNKTKRRWLPNLRRVRALQNGQVKYIQ--VCTRCLRS 56 >gi|198427866|ref|XP_002126303.1| PREDICTED: similar to mitochondrial ribosomal protein L28 [Ciona intestinalis] Length = 285 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 2 SRVCELTKKTVMSGNKVSHAN---NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 SR + ++ G K + K + + P L TL S+I+++K++ ++ L Sbjct: 102 SREGLWGGEGIVWGFKYARGKKMSRKYYKVWKPQLFTRTLYSEILDKKFKTTVTGLTLDL 161 Query: 59 VERQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 ++ G D F+ N+ L L+ +IL ++++K + Sbjct: 162 IDEAYGFDFFILNTSSTVLQEFGSKLKREILLRLADKDN 200 >gi|284052089|ref|ZP_06382299.1| 50S ribosomal protein L28 [Arthrospira platensis str. Paraca] gi|291569882|dbj|BAI92154.1| 50S ribosomal protein L28 [Arthrospira platensis NIES-39] Length = 78 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ ++ + NL + ++ +LR+S A++++E Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHRRSHKLQQANLQWKRIWWPQGKRWVRLRLSTKAIKTIE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|319760721|ref|YP_004124659.1| 50S ribosomal protein L28 [Candidatus Blochmannia vafer str. BVAF] gi|318039435|gb|ADV33985.1| 50S ribosomal protein L28 [Candidatus Blochmannia vafer str. BVAF] Length = 82 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C +T K ++GNK SH+ N T+R F+PN+ + D ++ +RIS LR ++ Sbjct: 1 MSRICRITGKRPINGNKRSHSMNATKRWFIPNIHYHRIWIDSKKKFCSIRISAKGLRFID 60 Query: 61 RQGGLDRFLSNSKKENLSARMRT 83 + G +D++LSN +N+ + Sbjct: 61 KLG-IDQYLSNLSSKNIKITKKK 82 >gi|51245535|ref|YP_065419.1| 50S ribosomal protein L28 [Desulfotalea psychrophila LSv54] gi|50876572|emb|CAG36412.1| probable 50S ribosomal protein L28 [Desulfotalea psychrophila LSv54] Length = 77 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VCE+ K ++GN VSHA+NKTRRR+LPNL ++ + + ++ +RS Sbjct: 14 MAKVCEICGKGPITGNNVSHAHNKTRRRWLPNLKKVRM-VTASGATVRGKVCTRCIRS 70 >gi|297568236|ref|YP_003689580.1| ribosomal protein L28 [Desulfurivibrio alkaliphilus AHT2] gi|296924151|gb|ADH84961.1| ribosomal protein L28 [Desulfurivibrio alkaliphilus AHT2] Length = 62 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC + K GN VSHA+NK+RRR+LPNL + + + R+ LRS Sbjct: 1 MSKVCSVCGKKPEVGNNVSHAHNKSRRRWLPNLQSVRVAVPG-GNTRRTRVCTRCLRS 57 >gi|225706482|gb|ACO09087.1| 39S ribosomal protein L28, mitochondrial precursor [Osmerus mordax] Length = 253 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 47/100 (47%), Gaps = 4/100 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + +SG K + + + + + P L L S+I++ K+ + ++ L Sbjct: 75 SQKGLWGGEGWISGFKYAKNDKLCPRLAKTWKPQLFNRELYSEILDHKFTITVTARVLDL 134 Query: 59 VERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 ++ G D ++ + KE+L S LR +L +++ + + Sbjct: 135 IDAAYGFDFYILKTPKEDLNSKLGMDLRRAMLLRLARRET 174 >gi|320105672|ref|YP_004181262.1| 50S ribosomal protein L28 [Terriglobus saanensis SP1PR4] gi|319924193|gb|ADV81268.1| ribosomal protein L28 [Terriglobus saanensis SP1PR4] Length = 70 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC+ K GN +SHA+N T+RR+ PNL + + + + ++R+ ++S Sbjct: 1 MAQVCQYCGKGPQFGNNISHAHNVTKRRWNPNLQAVKAVVNGANK--RVRVCTQCIKS 56 >gi|120406435|ref|YP_956264.1| 50S ribosomal protein L28 [Mycobacterium vanbaalenii PYR-1] gi|119959253|gb|ABM16258.1| LSU ribosomal protein L28P [Mycobacterium vanbaalenii PYR-1] Length = 78 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ +TRRR+ PN+ T ++ +LR+S ++ ++ Sbjct: 1 MSAHCQVTGRAPGFGNAVSHSHRRTRRRWNPNIQTKTYYLPSEGRRVKLRVSAKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|110597044|ref|ZP_01385333.1| ribosomal protein L28 [Chlorobium ferrooxidans DSM 13031] gi|110341235|gb|EAT59700.1| ribosomal protein L28 [Chlorobium ferrooxidans DSM 13031] Length = 71 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M +VC LT K + GN VSHANN R RF PNL + + ++ ++++S A+R + Sbjct: 1 MPKVCLLTGKKPIYGNTVSHANNHVRTRFEPNLHTKKVWIEEEKRFVKVKLSAKAMRIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|33862967|ref|NP_894527.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9313] gi|124023228|ref|YP_001017535.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9303] gi|67461502|sp|Q7V7P3|RL28_PROMM RecName: Full=50S ribosomal protein L28 gi|166226600|sp|A2C9W0|RL28_PROM3 RecName: Full=50S ribosomal protein L28 gi|33634884|emb|CAE20870.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9313] gi|123963514|gb|ABM78270.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9303] Length = 78 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L + +LR+S AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWLKLRVSTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|212550483|ref|YP_002308800.1| 50S ribosomal protein L28 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226738027|sp|B6YQB7|RL28_AZOPC RecName: Full=50S ribosomal protein L28 gi|212548721|dbj|BAG83389.1| 50S ribosomal protein L28 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 80 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T+K M GN V+H+N+KTRR+F N + +L IS LR++ Sbjct: 1 MSRICQITRKKSMKGNSVAHSNHKTRRKFNVNFFSKRFYWVEKDCWIKLNISANGLRTIN 60 Query: 61 RQGGLDRFLSNSKKE 75 + G LD + + K+ Sbjct: 61 KIG-LDAAIKQASKK 74 >gi|283851281|ref|ZP_06368563.1| ribosomal protein L28 [Desulfovibrio sp. FW1012B] gi|283573231|gb|EFC21209.1| ribosomal protein L28 [Desulfovibrio sp. FW1012B] Length = 68 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+++CE K SGN VSHANNKT+RRF PNL + + + + LRS Sbjct: 1 MAKICEHCGKKPQSGNNVSHANNKTKRRFEPNLVNVRAQLPS-GEVKTVTVCTRCLRS 57 >gi|66773144|ref|NP_001019570.1| 39S ribosomal protein L28, mitochondrial [Danio rerio] gi|63102137|gb|AAH95131.1| Mitochondrial ribosomal protein L28 [Danio rerio] Length = 252 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + +SG + + + + + + P L L S+I++QK+ + ++ AL ++ Sbjct: 80 WGGEGWISGFRYAKDDKLSTRLPKTWKPQLFTRELYSEILDQKFSVTVTSRALDLIDAAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 G D ++ + K++L S L+ +L +++ K + Sbjct: 140 GFDFYILKTPKQDLNSKFGMNLKRAMLLRLARKDT 174 >gi|189346166|ref|YP_001942695.1| 50S ribosomal protein L28 [Chlorobium limicola DSM 245] gi|226738048|sp|B3EH36|RL28_CHLL2 RecName: Full=50S ribosomal protein L28 gi|189340313|gb|ACD89716.1| ribosomal protein L28 [Chlorobium limicola DSM 245] Length = 72 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN TR RF PNL + + + ++++S A++ + Sbjct: 1 MSKVCVLTGKRPKYGNNVSHANNHTRTRFEPNLHTKRIWIEEEKCWVKVKLSAKAMKIIS 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|317486856|ref|ZP_07945668.1| ribosomal protein L28 [Bilophila wadsworthia 3_1_6] gi|316921895|gb|EFV43169.1| ribosomal protein L28 [Bilophila wadsworthia 3_1_6] Length = 73 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE K +GN VSH+N KT+R F PNL + + + + LRS Sbjct: 5 MSKQCEFCGKKPQTGNYVSHSNIKTKRVFNPNLQNVRHQF-ANGEVRTVSVCTRCLRS 61 >gi|304414060|ref|ZP_07395428.1| 50S ribosomal subunit protein L28 [Candidatus Regiella insecticola LSR1] gi|304283274|gb|EFL91670.1| 50S ribosomal subunit protein L28 [Candidatus Regiella insecticola LSR1] Length = 83 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C ++ K M GNK SHA N T+R F NL + +LRIS A+R+++ Sbjct: 6 MSRICPVSGKRAMRGNKRSHAMNATKRSFNVNLQSHRFWDTEKGRFVKLRISTKAMRTID 65 Query: 61 RQG 63 + G Sbjct: 66 KHG 68 >gi|254456316|ref|ZP_05069745.1| 50S ribosomal protein L28 [Candidatus Pelagibacter sp. HTCC7211] gi|207083318|gb|EDZ60744.1| 50S ribosomal protein L28 [Candidatus Pelagibacter sp. HTCC7211] Length = 91 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 48/68 (70%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M G+ VSHANNKT+RRFLPNL ++ S++M++ +L +S +RSV+++G D +L Sbjct: 1 MKGHNVSHANNKTKRRFLPNLKKVKFTSELMKRSLKLTVSNAGVRSVDKKGSFDEYLKVV 60 Query: 73 KKENLSAR 80 K +NLS R Sbjct: 61 KNKNLSPR 68 >gi|21674429|ref|NP_662494.1| 50S ribosomal protein L28 [Chlorobium tepidum TLS] gi|25009090|sp|Q93SU8|RL28_CHLTE RecName: Full=50S ribosomal protein L28 gi|13899154|gb|AAG12418.1| RL28 [Chlorobaculum tepidum] gi|21647613|gb|AAM72836.1| ribosomal protein L28 [Chlorobium tepidum TLS] Length = 72 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN TR RF PNL + + + ++R++ A++ + Sbjct: 1 MSKVCVLTGKRPKYGNNVSHANNHTRTRFEPNLHTKRIWIEEERRWVKVRLTAKAMKIMS 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|302865851|ref|YP_003834488.1| 50S ribosomal protein L28 [Micromonospora aurantiaca ATCC 27029] gi|315502396|ref|YP_004081283.1| ribosomal protein l28 [Micromonospora sp. L5] gi|302568710|gb|ADL44912.1| ribosomal protein L28 [Micromonospora aurantiaca ATCC 27029] gi|315409015|gb|ADU07132.1| ribosomal protein L28 [Micromonospora sp. L5] Length = 63 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G+ VSH++ +T RR+ PN+ + + +L++ ++ Sbjct: 1 MASVCDVCGKGPGFGHNVSHSHRRTNRRWNPNIQSVRTPAGG-GTTKKLQVCTSCIK 56 >gi|238063273|ref|ZP_04607982.1| 50S ribosomal protein L28 [Micromonospora sp. ATCC 39149] gi|330466257|ref|YP_004404000.1| 50S ribosomal protein L28 [Verrucosispora maris AB-18-032] gi|237885084|gb|EEP73912.1| 50S ribosomal protein L28 [Micromonospora sp. ATCC 39149] gi|328809228|gb|AEB43400.1| 50S ribosomal protein L28 [Verrucosispora maris AB-18-032] Length = 63 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G+ VSH++ +T RR+ PN+ + + +L++ ++ Sbjct: 1 MASVCDVCGKGPGFGHNVSHSHRRTNRRWNPNIQSVRTPAGG-GTTKKLKVCTSCIK 56 >gi|209525260|ref|ZP_03273802.1| ribosomal protein L28 [Arthrospira maxima CS-328] gi|209494275|gb|EDZ94588.1| ribosomal protein L28 [Arthrospira maxima CS-328] Length = 78 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K +G VSH++ ++ + NL + ++ +L++S A++++E Sbjct: 1 MSRVCQLTGKRANNGMAVSHSHRRSHKLQQANLQWKRIWWPQGKRWVRLKLSTKAIKTIE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|118487864|gb|ABK95755.1| unknown [Populus trichocarpa] Length = 150 Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 75 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKN 134 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 135 G-LDAVAKKA 143 >gi|46579622|ref|YP_010430.1| 50S ribosomal protein L28 [Desulfovibrio vulgaris str. Hildenborough] gi|120602890|ref|YP_967290.1| 50S ribosomal protein L28 [Desulfovibrio vulgaris DP4] gi|67461458|sp|Q72CS2|RL28_DESVH RecName: Full=50S ribosomal protein L28 gi|166226569|sp|A1VEJ7|RL28_DESVV RecName: Full=50S ribosomal protein L28 gi|46449037|gb|AAS95689.1| ribosomal protein L28 [Desulfovibrio vulgaris str. Hildenborough] gi|120563119|gb|ABM28863.1| LSU ribosomal protein L28P [Desulfovibrio vulgaris DP4] gi|311233426|gb|ADP86280.1| ribosomal protein L28 [Desulfovibrio vulgaris RCH1] Length = 69 Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + CE+ K G+ VSH+N KT+RRF PNL + + + + LRS Sbjct: 1 MGKQCEVCGKKPQVGHHVSHSNIKTKRRFEPNLQSVRHQLPS-GEVKTVTVCTRCLRS 57 >gi|116782045|gb|ABK22346.1| unknown [Picea sitchensis] Length = 148 Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC LT K + NKVS +N+KT++ NL + + ++ +LRIS AL+++E+ Sbjct: 72 SRVCPLTGKRANNANKVSFSNHKTKKLQGVNLQYKRIWWEAGKRFVKLRISTKALKTIEK 131 Query: 62 QGGLDRFLSNS 72 +G LD + Sbjct: 132 KG-LDAMAKKA 141 >gi|302829418|ref|XP_002946276.1| plastid/chloroplast ribosomal protein L28 [Volvox carteri f. nagariensis] gi|300269091|gb|EFJ53271.1| plastid/chloroplast ribosomal protein L28 [Volvox carteri f. nagariensis] Length = 196 Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 35/61 (57%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +VC+LT K N V +N K+R+ PNL + + ++ +LRI A++++E++ Sbjct: 35 KVCDLTGKKRNKANSVCFSNKKSRKWQEPNLQNKKVFWEEGQRWVKLRICTKAIKTLEKK 94 Query: 63 G 63 G Sbjct: 95 G 95 >gi|295836318|ref|ZP_06823251.1| ribosomal protein L28 [Streptomyces sp. SPB74] gi|302522125|ref|ZP_07274467.1| ribosomal protein L28 [Streptomyces sp. SPB78] gi|318056538|ref|ZP_07975261.1| 50S ribosomal protein L28 [Streptomyces sp. SA3_actG] gi|318076099|ref|ZP_07983431.1| 50S ribosomal protein L28 [Streptomyces sp. SA3_actF] gi|295825960|gb|EFG64575.1| ribosomal protein L28 [Streptomyces sp. SPB74] gi|302431020|gb|EFL02836.1| ribosomal protein L28 [Streptomyces sp. SPB78] Length = 61 Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTPRRWNPNIQRVRAVVGGTPK--RLNVCTSCIK 55 >gi|118464463|ref|YP_882992.1| 50S ribosomal protein L28 [Mycobacterium avium 104] gi|254776245|ref|ZP_05217761.1| 50S ribosomal protein L28 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165750|gb|ABK66647.1| ribosomal protein L28 [Mycobacterium avium 104] Length = 64 Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ K +L + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWNPNVQTVHAVARPGGNKQRLNVCTSCIK 57 >gi|119606239|gb|EAW85833.1| mitochondrial ribosomal protein L28, isoform CRA_e [Homo sapiens] Length = 290 Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 47/101 (46%), Gaps = 7/101 (6%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 106 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 165 Query: 59 VERQGGLDRFLSN---SKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 166 IDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQ 206 >gi|183601827|ref|ZP_02963196.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis HN019] gi|219682742|ref|YP_002469125.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis AD011] gi|254801502|sp|B8DVP8|RL28_BIFA0 RecName: Full=50S ribosomal protein L28 gi|183218712|gb|EDT89354.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis HN019] gi|219620392|gb|ACL28549.1| ribosomal protein L28 [Bifidobacterium animalis subsp. lactis AD011] gi|289178039|gb|ADC85285.1| LSU ribosomal protein L28P [Bifidobacterium animalis subsp. lactis BB-12] Length = 65 Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ + +RRFLPNL + D Q +LR+ L+ Sbjct: 1 MAARCAVCGKGPQTGYTVSHSHIRNKRRFLPNLQPVRTTVD--GQNVRLRVCTKCLK 55 >gi|168050997|ref|XP_001777943.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670703|gb|EDQ57267.1| predicted protein [Physcomitrella patens subsp. patens] Length = 76 Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R C+LT K +G KVS +N++T+ PNL L + ++ +LRIS AL+++E+ Sbjct: 1 RRCDLTGKKANNGYKVSFSNHRTKHLQQPNLQYKRLWWEEGKRFVKLRISTKALKTIEKN 60 Query: 63 G 63 G Sbjct: 61 G 61 >gi|33865813|ref|NP_897372.1| 50S ribosomal protein L28 [Synechococcus sp. WH 8102] gi|67461498|sp|Q7U6Q8|RL28_SYNPX RecName: Full=50S ribosomal protein L28 gi|33632983|emb|CAE07794.1| 50S ribosomal protein L28 [Synechococcus sp. WH 8102] Length = 78 Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL L ++ LR++ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQNRRLWWAEGKRWVNLRVTTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|33520048|ref|NP_878880.1| 50S ribosomal protein L28 [Candidatus Blochmannia floridanus] gi|67461506|sp|Q7VRK1|RL28_BLOFL RecName: Full=50S ribosomal protein L28 gi|33504394|emb|CAD83287.1| 50S ribosomal subunit protein L28 [Candidatus Blochmannia floridanus] Length = 79 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T+K M+GNK SHA N T+R F+PN+ + ++ +LRIS +R V+ Sbjct: 1 MSRTCQITRKKPMNGNKRSHAMNATKRWFIPNIHSHRFWIENKKKFIKLRISTKGIRLVD 60 Query: 61 RQGGLDRFL 69 + G +++FL Sbjct: 61 KLG-IEQFL 68 >gi|209735506|gb|ACI68622.1| 39S ribosomal protein L28, mitochondrial precursor [Salmo salar] Length = 252 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + +SG + ++ + + R + P L L S+I+ K+ + ++ AL ++ Sbjct: 80 WGGEGWISGFRYANNDKLSTRLERVWKPQLFTRELYSEILNHKFTITVTARALDLIDAAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 G D ++ + KE+L S LR +L +++ K + Sbjct: 140 GFDFYILRTPKEDLNSKLGMDLRRAMLLRLAFKDT 174 >gi|166365941|ref|YP_001658214.1| 50S ribosomal protein L28 [Microcystis aeruginosa NIES-843] gi|189029446|sp|B0JLJ8|RL28_MICAN RecName: Full=50S ribosomal protein L28 gi|159029749|emb|CAO87827.1| rpmB [Microcystis aeruginosa PCC 7806] gi|166088314|dbj|BAG03022.1| 50S ribosomal protein L28 [Microcystis aeruginosa NIES-843] Length = 78 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC +T K + VSH++ +T++ NL + + +LRIS A++++E Sbjct: 1 MSRVCTMTGKKANNAYAVSHSHRRTKKLQEANLQWKRVWWSEGNRWVKLRISTKAIKTIE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|238927485|ref|ZP_04659245.1| ribosomal protein L28 [Selenomonas flueggei ATCC 43531] gi|238884767|gb|EEQ48405.1| ribosomal protein L28 [Selenomonas flueggei ATCC 43531] Length = 63 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K +MSGN VSH++ KT+R++ PN+ R+ + + + ++ + LRS Sbjct: 1 MASVCEVCGKGMMSGNNVSHSHVKTKRKWKPNIQRVRALVE--GEVKRVNVCTRCLRS 56 >gi|113953218|ref|YP_730605.1| 50S ribosomal protein L28 [Synechococcus sp. CC9311] gi|123327823|sp|Q0IAB7|RL28_SYNS3 RecName: Full=50S ribosomal protein L28 gi|113880569|gb|ABI45527.1| ribosomal protein L28 [Synechococcus sp. CC9311] Length = 78 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L ++ LRI+ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWINLRITTRALKTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + +L + L Sbjct: 61 KKG------LGAYARSLGINLAKL 78 >gi|145593828|ref|YP_001158125.1| 50S ribosomal protein L28 [Salinispora tropica CNB-440] gi|159036813|ref|YP_001536066.1| 50S ribosomal protein L28 [Salinispora arenicola CNS-205] gi|145303165|gb|ABP53747.1| LSU ribosomal protein L28P [Salinispora tropica CNB-440] gi|157915648|gb|ABV97075.1| ribosomal protein L28 [Salinispora arenicola CNS-205] Length = 63 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G+ VSH++ +T RR+ PN+ + + +L++ ++ Sbjct: 1 MASVCDVCGKGPGFGHNVSHSHRRTNRRWNPNIQSVRTPAGG-GNTKKLKVCTSCIK 56 >gi|258652092|ref|YP_003201248.1| 50S ribosomal protein L28 [Nakamurella multipartita DSM 44233] gi|258555317|gb|ACV78259.1| ribosomal protein L28 [Nakamurella multipartita DSM 44233] Length = 63 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +L + L+ Sbjct: 1 MAAVCDVCGKGPGFGMSVSHSHRRTNRRWNPNIQPVRAQV-APGTVRKLNVCTSCLK 56 >gi|254425238|ref|ZP_05038956.1| ribosomal protein L28 [Synechococcus sp. PCC 7335] gi|196192727|gb|EDX87691.1| ribosomal protein L28 [Synechococcus sp. PCC 7335] Length = 78 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C+LT K + VSH++ +T+R NL + + +LR+S AL++++ Sbjct: 1 MSKKCDLTGKKANNAFSVSHSHRRTKRLQEANLQDKRIWWPQGNRFVRLRVSTKALKTLQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|297823141|ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] gi|297325292|gb|EFH55712.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp. lyrata] Length = 143 Score = 73.9 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 68 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKN 127 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 128 G-LDAVAKKA 136 >gi|292669804|ref|ZP_06603230.1| 50S ribosomal protein L28 [Selenomonas noxia ATCC 43541] gi|292648601|gb|EFF66573.1| 50S ribosomal protein L28 [Selenomonas noxia ATCC 43541] Length = 63 Score = 73.9 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K MSGN VSH++ KT+R++ PN+ R+ + + + LRS Sbjct: 1 MASVCEVCGKGPMSGNNVSHSHVKTKRKWKPNIQRVRALVKGEVKHV--NVCTRCLRS 56 >gi|309810314|ref|ZP_07704152.1| ribosomal protein L28 [Dermacoccus sp. Ellin185] gi|308435742|gb|EFP59536.1| ribosomal protein L28 [Dermacoccus sp. Ellin185] Length = 64 Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIME-QKYQLRISKCALR 57 M+ C++ K G+ +SH+N +T+RR+ PN+ R+ + +L + L+ Sbjct: 1 MAATCDVCGKGPGFGHNISHSNRRTKRRWNPNIQRVRALVGEAGVTPKRLNVCTSCLK 58 >gi|302342676|ref|YP_003807205.1| ribosomal protein L28 [Desulfarculus baarsii DSM 2075] gi|301639289|gb|ADK84611.1| ribosomal protein L28 [Desulfarculus baarsii DSM 2075] Length = 63 Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC K G +SHA+NKT+RRF PNL + + ++R+ LRS Sbjct: 1 MSQVCAFCGKKPQVGYNISHAHNKTKRRFNPNLQSVRHV--EGGTVKRIRVCTRCLRS 56 >gi|88808581|ref|ZP_01124091.1| 50S ribosomal protein L28 [Synechococcus sp. WH 7805] gi|148239573|ref|YP_001224960.1| 50S ribosomal protein L28 [Synechococcus sp. WH 7803] gi|166228167|sp|A5GL48|RL28_SYNPW RecName: Full=50S ribosomal protein L28 gi|88787569|gb|EAR18726.1| 50S ribosomal protein L28 [Synechococcus sp. WH 7805] gi|147848112|emb|CAK23663.1| 50S ribosomal protein L28 [Synechococcus sp. WH 7803] Length = 78 Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L ++ LRI+ AL++++ Sbjct: 1 MSRVCQLTGTKANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWVNLRITTRALKTIQ 60 Query: 61 RQGGLDRFLSNSKKENLSARMRTL 84 ++G + ++L + L Sbjct: 61 KKG------LGAYAKSLGIDLARL 78 >gi|256374756|ref|YP_003098416.1| ribosomal protein L28 [Actinosynnema mirum DSM 43827] gi|255919059|gb|ACU34570.1| ribosomal protein L28 [Actinosynnema mirum DSM 43827] Length = 79 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 35/62 (56%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 +R C+LT + G +VSH++ +T RR+LPN R + L +S +++V+R Sbjct: 3 ARHCQLTGRKPGYGKQVSHSHRRTNRRWLPNTQRRRYWLPSENRYVVLTLSTKGVKTVDR 62 Query: 62 QG 63 +G Sbjct: 63 RG 64 >gi|108798902|ref|YP_639099.1| 50S ribosomal protein L28 [Mycobacterium sp. MCS] gi|119868017|ref|YP_937969.1| 50S ribosomal protein L28 [Mycobacterium sp. KMS] gi|126434502|ref|YP_001070193.1| 50S ribosomal protein L28 [Mycobacterium sp. JLS] gi|108769321|gb|ABG08043.1| LSU ribosomal protein L28P [Mycobacterium sp. MCS] gi|119694106|gb|ABL91179.1| LSU ribosomal protein L28P [Mycobacterium sp. KMS] gi|126234302|gb|ABN97702.1| LSU ribosomal protein L28P [Mycobacterium sp. JLS] Length = 64 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +S K ++ + L+ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTSRRWNPNIQTVRAVSHPGGNKKRVNVCTSCLK 57 >gi|158522067|ref|YP_001529937.1| ribosomal protein L28 [Desulfococcus oleovorans Hxd3] gi|226738068|sp|A8ZTS7|RL28_DESOH RecName: Full=50S ribosomal protein L28 gi|158510893|gb|ABW67860.1| ribosomal protein L28 [Desulfococcus oleovorans Hxd3] Length = 63 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K M G VSHA+N T+RRF PNL R+ + D + L + ++S Sbjct: 1 MARQCEICGKKPMVGANVSHAHNVTKRRFNPNLQRVRAVRD--GKPQTLYVCTNCIKS 56 >gi|60393665|sp|P68998|RL28_MYCLE RecName: Full=Putative 50S ribosomal protein L28 Length = 64 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +++ K QL++ ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVHMVTRPGGNKQQLKVCTSCIK 57 >gi|320093937|ref|ZP_08025770.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979131|gb|EFW10641.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 178 str. F0338] Length = 63 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC++ K G VSH++ +T RR+ PN+ R+ + D + +L + L+S Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHVRTNRRWNPNIQRVRALVDGTPK--RLNVCTKCLKS 56 >gi|87124436|ref|ZP_01080285.1| ribosomal protein L28 [Synechococcus sp. RS9917] gi|86168008|gb|EAQ69266.1| ribosomal protein L28 [Synechococcus sp. RS9917] Length = 78 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT +G VSH++ +T++ NL + L ++ LRI+ AL++++ Sbjct: 1 MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWVNLRITTRALKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|298529759|ref|ZP_07017162.1| ribosomal protein L28 [Desulfonatronospira thiodismutans ASO3-1] gi|298511195|gb|EFI35098.1| ribosomal protein L28 [Desulfonatronospira thiodismutans ASO3-1] Length = 68 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K +GN VSHANN TRRRF+PNL R+ + ++R+ LRS Sbjct: 1 MTKQCEVCGKKPATGNNVSHANNHTRRRFMPNLRRVRAQLP-QGRVRKIRVCTRCLRS 57 >gi|149194808|ref|ZP_01871902.1| 50S ribosomal protein L28 [Caminibacter mediatlanticus TB-2] gi|149134967|gb|EDM23449.1| 50S ribosomal protein L28 [Caminibacter mediatlanticus TB-2] Length = 61 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+ K GN+VSH+N KTR +F PN+ + + D +++ +++I L+S++ Sbjct: 1 MARKCEICGKGPQFGNRVSHSNRKTRHKFDPNIQHVRIEVDGVKK--RIKICTSCLKSLK 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|307205008|gb|EFN83531.1| 39S ribosomal protein L28, mitochondrial [Harpegnathos saltator] Length = 267 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 29 FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQ 87 +LP+L R L S++++ ++ I+ +R + G D +L + +L S L+ + Sbjct: 99 WLPDLQRSVLYSEVLDSYMRVVITPRVIRLIHEHYGFDHYLLKTPACDLQSLLALKLKRE 158 Query: 88 ILKKMSEK 95 IL +++K Sbjct: 159 ILIALADK 166 >gi|47196557|emb|CAF88924.1| unnamed protein product [Tetraodon nigroviridis] Length = 157 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 24 KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMR 82 + ++ + P L + L S+I++ K+ + ++ L ++ G D ++ + KE+L S Sbjct: 4 RLKKTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAYGFDFYILKTPKEDLNSKLGM 63 Query: 83 TLRSQILKKMSEKSS 97 L+ +L +++ +S+ Sbjct: 64 DLKRAMLLRLARRST 78 >gi|322437257|ref|YP_004219469.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX9] gi|321164984|gb|ADW70689.1| ribosomal protein L28 [Acidobacterium sp. MP5ACTX9] Length = 63 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C+L K GN VSHANNKTRRR+ NL + D ++ + +++ Sbjct: 1 MAAKCDLCGKGPQFGNNVSHANNKTRRRWNVNLQPVKAKVD--GGSKRMSVCTSCIKT 56 >gi|158254318|gb|AAI54266.1| Mrpl28 protein [Danio rerio] Length = 252 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + +SG + + + + + + P L L S+I++QK+ + ++ L ++ Sbjct: 80 WGGEGWISGFRYAKDDKLSTRLPKTWKPQLFTRELYSEILDQKFSVTVTSRTLDLIDAAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 G D ++ + K++L S L+ +L +++ K + Sbjct: 140 GFDFYILKTPKQDLNSKFGMNLKRAMLLRLACKDT 174 >gi|218888189|ref|YP_002437510.1| 50S ribosomal protein L28 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226732826|sp|B8DJG5|RL28_DESVM RecName: Full=50S ribosomal protein L28 gi|218759143|gb|ACL10042.1| ribosomal protein L28 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 69 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C++ K G+ VSH+N KT+RRF PNL + + L + LRS Sbjct: 1 MSKQCDVCGKKAQVGHHVSHSNIKTKRRFEPNLQSVRHQYP-NGEVKTLSVCTRCLRS 57 >gi|18403278|ref|NP_565765.1| 50S ribosomal protein L28, chloroplast (CL28) [Arabidopsis thaliana] gi|21542433|sp|O22795|RK28_ARATH RecName: Full=50S ribosomal protein L28, chloroplastic; AltName: Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1| putative chloroplast 50S ribosomal protein L28 [Arabidopsis thaliana] gi|20196843|gb|AAB80662.2| putative chloroplast 50S ribosomal protein L28 [Arabidopsis thaliana] gi|21387067|gb|AAM47937.1| putative chloroplast 50S ribosomal protein L28 [Arabidopsis thaliana] gi|21592705|gb|AAM64654.1| putative chloroplast 50S ribosomal protein L28 [Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S ribosomal protein L28 [Arabidopsis thaliana] Length = 143 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL+++E+ Sbjct: 68 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKN 127 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 128 G-LDAVAKKA 136 >gi|306820972|ref|ZP_07454592.1| 50S ribosomal protein L28 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551086|gb|EFM39057.1| 50S ribosomal protein L28 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 63 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K SGN VSH+N T+R F PNL + I D + ++++ LRS Sbjct: 1 MAFVCEICGKGTTSGNNVSHSNRHTKRVFRPNLQSVKAIVDGTPR--RVKVCTRCLRS 56 >gi|218439797|ref|YP_002378126.1| ribosomal protein L28 [Cyanothece sp. PCC 7424] gi|226738063|sp|B7K8R0|RL28_CYAP7 RecName: Full=50S ribosomal protein L28 gi|218172525|gb|ACK71258.1| ribosomal protein L28 [Cyanothece sp. PCC 7424] Length = 78 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K + +SH++ +T+R NL + + ++ +LR+S A++++E Sbjct: 1 MARHCELTGKKANNAFSISHSHRRTKRLQHANLQWKRIWWEEGKRWVKLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|15842529|ref|NP_337566.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|148662825|ref|YP_001284348.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148824165|ref|YP_001288919.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis F11] gi|167970004|ref|ZP_02552281.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|215404951|ref|ZP_03417132.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|215412819|ref|ZP_03421531.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 94_M4241A] gi|215428426|ref|ZP_03426345.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T92] gi|215431925|ref|ZP_03429844.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|215447242|ref|ZP_03433994.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|218754736|ref|ZP_03533532.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis GM 1503] gi|219559007|ref|ZP_03538083.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T17] gi|253797932|ref|YP_003030933.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis KZN 1435] gi|254365611|ref|ZP_04981656.1| ribosomal protein L28 [Mycobacterium tuberculosis str. Haarlem] gi|254552052|ref|ZP_05142499.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187999|ref|ZP_05765473.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CPHL_A] gi|260202117|ref|ZP_05769608.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T46] gi|260206299|ref|ZP_05773790.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis K85] gi|289444539|ref|ZP_06434283.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis T46] gi|289448647|ref|ZP_06438391.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis CPHL_A] gi|289553235|ref|ZP_06442445.1| ribosomal protein L28 [Mycobacterium tuberculosis KZN 605] gi|289571173|ref|ZP_06451400.1| ribosomal protein L28 [Mycobacterium tuberculosis T17] gi|289575682|ref|ZP_06455909.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis K85] gi|289746774|ref|ZP_06506152.1| ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|289751652|ref|ZP_06511030.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T92] gi|289755091|ref|ZP_06514469.1| ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|289759100|ref|ZP_06518478.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|289763155|ref|ZP_06522533.1| ribosomal protein L28 [Mycobacterium tuberculosis GM 1503] gi|294993938|ref|ZP_06799629.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 210] gi|297635600|ref|ZP_06953380.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN 4207] gi|297732598|ref|ZP_06961716.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN R506] gi|298526445|ref|ZP_07013854.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 94_M4241A] gi|306777268|ref|ZP_07415605.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu001] gi|306781179|ref|ZP_07419516.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu002] gi|306785817|ref|ZP_07424139.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu003] gi|306789857|ref|ZP_07428179.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu004] gi|306794669|ref|ZP_07432971.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu005] gi|306798912|ref|ZP_07437214.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu006] gi|306804757|ref|ZP_07441425.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu008] gi|306808951|ref|ZP_07445619.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu007] gi|306969049|ref|ZP_07481710.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu009] gi|306973386|ref|ZP_07486047.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu010] gi|307081094|ref|ZP_07490264.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu011] gi|307085697|ref|ZP_07494810.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu012] gi|313659930|ref|ZP_07816810.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN V2475] gi|13882839|gb|AAK47380.1| ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|134151124|gb|EBA43169.1| ribosomal protein L28 [Mycobacterium tuberculosis str. Haarlem] gi|148506977|gb|ABQ74786.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148722692|gb|ABR07317.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis F11] gi|253319435|gb|ACT24038.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis KZN 1435] gi|289417458|gb|EFD14698.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis T46] gi|289421605|gb|EFD18806.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis CPHL_A] gi|289437867|gb|EFD20360.1| ribosomal protein L28 [Mycobacterium tuberculosis KZN 605] gi|289540113|gb|EFD44691.1| LSU ribosomal protein L28 [Mycobacterium tuberculosis K85] gi|289544927|gb|EFD48575.1| ribosomal protein L28 [Mycobacterium tuberculosis T17] gi|289687302|gb|EFD54790.1| ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|289692239|gb|EFD59668.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T92] gi|289695678|gb|EFD63107.1| ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|289710661|gb|EFD74677.1| ribosomal protein L28 [Mycobacterium tuberculosis GM 1503] gi|289714664|gb|EFD78676.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|298496239|gb|EFI31533.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 94_M4241A] gi|308214413|gb|EFO73812.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu001] gi|308326014|gb|EFP14865.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu002] gi|308329592|gb|EFP18443.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu003] gi|308333683|gb|EFP22534.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu004] gi|308337081|gb|EFP25932.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu005] gi|308340893|gb|EFP29744.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu006] gi|308344730|gb|EFP33581.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu007] gi|308348710|gb|EFP37561.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu008] gi|308353406|gb|EFP42257.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu009] gi|308357282|gb|EFP46133.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu010] gi|308361295|gb|EFP50146.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu011] gi|308364781|gb|EFP53632.1| ribosomal protein L28 [Mycobacterium tuberculosis SUMu012] gi|323718449|gb|EGB27622.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis CDC1551A] gi|326904589|gb|EGE51522.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis W-148] gi|328457707|gb|AEB03130.1| ribosomal protein L28 [Mycobacterium tuberculosis KZN 4207] Length = 64 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ K +L + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIK 57 >gi|229818292|ref|ZP_04448573.1| hypothetical protein BIFANG_03592 [Bifidobacterium angulatum DSM 20098] gi|229784162|gb|EEP20276.1| hypothetical protein BIFANG_03592 [Bifidobacterium angulatum DSM 20098] Length = 64 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K G VSH++ + +R F PNL + D + ++R+ L+ Sbjct: 1 MAARCAVCGKGPQVGYTVSHSHIRNKRTFRPNLQPVHTTVD--GENVRVRVCVKCLK 55 >gi|313896664|ref|ZP_07830212.1| ribosomal protein L28 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529989|ref|ZP_08031065.1| ribosomal protein L28 [Selenomonas artemidis F0399] gi|312974581|gb|EFR40048.1| ribosomal protein L28 [Selenomonas sp. oral taxon 137 str. F0430] gi|320137786|gb|EFW29692.1| ribosomal protein L28 [Selenomonas artemidis F0399] Length = 63 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K MSGN VSH++ KT+R++ PN+ R+ + + + + LRS Sbjct: 1 MASVCEVCGKGPMSGNNVSHSHVKTKRKWKPNIQRVRALVK--GEIKHVNVCTRCLRS 56 >gi|16329458|ref|NP_440186.1| 50S ribosomal protein L28 [Synechocystis sp. PCC 6803] gi|2500318|sp|P72851|RL28_SYNY3 RecName: Full=50S ribosomal protein L28 gi|1651940|dbj|BAA16866.1| 50S ribosomal protein L28 [Synechocystis sp. PCC 6803] Length = 78 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+LT K +G VSH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MARRCQLTGKKANNGFAVSHSHRRTKKLQQANLQWKRVWWPEGNRFVRLRLSTTAIKTLE 60 Query: 61 RQG 63 +G Sbjct: 61 SKG 63 >gi|316972747|gb|EFV56401.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis] Length = 852 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR-------FLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + ++ G K+S+ + +R + P L + L S+I+++ + ++ L+ + Sbjct: 93 WGGEGIVKGYKLSNIPPRRKRFLPRLPRFWFPTLMKKVLYSEILDKYMLVTVTSRTLQLI 152 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 + GLD +L + + +L S L+ +L ++ K Sbjct: 153 DENQGLDYYLLRTNEVDLCSKLGCKLKRILLLALARK 189 >gi|229366872|gb|ACQ58416.1| 39S ribosomal protein L28, mitochondrial precursor [Anoplopoma fimbria] Length = 252 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 7 LTKKTVMSGNKVSHAN---NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + +SG + ++ + N+ ++ + P L + L S+I++ K+ + ++ L ++ Sbjct: 79 WGGEGWISGFRYANNDKMSNRLKKTWKPQLFKRELYSEILDHKFTITVTPRTLNLIDAAF 138 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEKSS 97 G D ++ + +E+L S L+ +L +++ +++ Sbjct: 139 GFDFYILRTPREDLNSKLGMDLKRAMLLRLARRNT 173 >gi|240168964|ref|ZP_04747623.1| 50S ribosomal protein L28 [Mycobacterium kansasii ATCC 12478] Length = 64 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +S K ++ + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVRAVSRPGGNKKRINVCTSCIK 57 >gi|224373597|ref|YP_002607969.1| ribosomal protein L28 [Nautilia profundicola AmH] gi|254801370|sp|B9L6I1|RL28_NAUPA RecName: Full=50S ribosomal protein L28 gi|223589830|gb|ACM93566.1| ribosomal protein L28 [Nautilia profundicola AmH] Length = 61 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+ K GN+VSH+N KTR +F PN+ + + +I +++I LRS++ Sbjct: 1 MARKCEICGKGPQFGNRVSHSNRKTRHKFNPNIQSVRI--EINGVSRKVKICTSCLRSLK 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|116750695|ref|YP_847382.1| 50S ribosomal protein L28 [Syntrophobacter fumaroxidans MPOB] gi|166228166|sp|A0LNE5|RL28_SYNFM RecName: Full=50S ribosomal protein L28 gi|116699759|gb|ABK18947.1| LSU ribosomal protein L28P [Syntrophobacter fumaroxidans MPOB] Length = 64 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE K GN VSHANNKT+R + PNL + + D +++ +R+ Sbjct: 1 MSRKCEFCGKEPHVGNNVSHANNKTKRLWYPNLQTVRHM-DKSGAVRRVKACTRCIRT 57 >gi|78223526|ref|YP_385273.1| 50S ribosomal protein L28 [Geobacter metallireducens GS-15] gi|123571476|sp|Q39T76|RL28_GEOMG RecName: Full=50S ribosomal protein L28 gi|78194781|gb|ABB32548.1| LSU ribosomal protein L28P [Geobacter metallireducens GS-15] Length = 63 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE+ K GN VSHANNKTR + PNL ++ + +++ +RS Sbjct: 1 MSRKCEICGKGPSFGNNVSHANNKTRTTWYPNLQKVKAV--RNGSVQTIKVCTRCIRS 56 >gi|284928880|ref|YP_003421402.1| 50S ribosomal protein L28P [cyanobacterium UCYN-A] gi|284809339|gb|ADB95044.1| LSU ribosomal protein L28P [cyanobacterium UCYN-A] Length = 83 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 37/62 (59%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K +G VSH++ +T++ NL + + + +LR+S A++++E Sbjct: 6 MSRKCQLTGKKANNGFAVSHSHRRTKKLQQVNLQWKRIWWEEGNRWVKLRLSTKAIKTLE 65 Query: 61 RQ 62 ++ Sbjct: 66 KK 67 >gi|161485759|ref|NP_683251.2| 50S ribosomal protein L28 [Thermosynechococcus elongatus BP-1] gi|67461522|sp|Q8DG62|RL28_THEEB RecName: Full=50S ribosomal protein L28 Length = 78 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+LT K + +SH++ +T++ NL + ++ +LR+S A++++E Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLE 60 Query: 61 RQG 63 R+G Sbjct: 61 RKG 63 >gi|4808368|emb|CAB42782.1| putative 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)] Length = 73 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 6 ELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 LT GN++SH++ +T RRF PN+ + +LR+S +R+V+ G Sbjct: 1 MLTGARPGFGNRISHSHRRTSRRFDPNIQTKRYWLPSENRHVRLRLSTKGIRTVDSIG 58 >gi|254821175|ref|ZP_05226176.1| 50S ribosomal protein L28 [Mycobacterium intracellulare ATCC 13950] Length = 63 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + ++ +L + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVHVARPGGNKQ-RLNVCTSCIK 56 >gi|170077468|ref|YP_001734106.1| 50S ribosomal protein L28 [Synechococcus sp. PCC 7002] gi|226699175|sp|B1XIH9|RL28_SYNP2 RecName: Full=50S ribosomal protein L28 gi|169885137|gb|ACA98850.1| 50S ribosomal protein L28 [Synechococcus sp. PCC 7002] Length = 78 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C++T K + VSH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MSRKCQITGKKANNAMAVSHSHRRTKKLQEVNLQWKRVWWPEGNRFVRLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|159476894|ref|XP_001696546.1| plastid ribosomal protein L28 [Chlamydomonas reinhardtii] gi|158282771|gb|EDP08523.1| plastid ribosomal protein L28 [Chlamydomonas reinhardtii] Length = 195 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +VC+LT K N V +N K+R+ PNL + + ++ +LRI A++++E + Sbjct: 35 KVCDLTGKKRNKANSVCFSNKKSRKWQEPNLQNKKVFWEEGQRWVKLRICTKAIKTLENK 94 Query: 63 G 63 G Sbjct: 95 G 95 >gi|17230122|ref|NP_486670.1| 50S ribosomal protein L28 [Nostoc sp. PCC 7120] gi|20139492|sp|Q8YTT3|RL28_ANASP RecName: Full=50S ribosomal protein L28 gi|17131723|dbj|BAB74329.1| 50S ribosomal protein L28 [Nostoc sp. PCC 7120] Length = 78 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T+R NL + + +L++S A++++E Sbjct: 1 MSRRCDLTGKKANNAFAVSHSHRRTKRLQQVNLQNKRVWWPSGNRWVKLKLSTKAIKTLE 60 Query: 61 RQG 63 +G Sbjct: 61 VKG 63 >gi|222824028|ref|YP_002575602.1| 50S ribosomal protein L28 [Campylobacter lari RM2100] gi|254801348|sp|B9KCR2|RL28_CAMLR RecName: Full=50S ribosomal protein L28 gi|222539250|gb|ACM64351.1| 50S ribosomal protein L28 [Campylobacter lari RM2100] Length = 64 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN VSHANNKT+RRFLPNL + + + ++R++ LR+++ Sbjct: 1 MSRICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRITLED-GTTRKVRVAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|91070560|gb|ABE11464.1| 50S ribosomal protein L28 [uncultured Prochlorococcus marinus clone HOT0M-7B6] Length = 78 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L + ++ ++IS AL+S++ Sbjct: 1 MSRVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQ 60 Query: 61 RQGGLDRFLSNS 72 + G LD+F ++ Sbjct: 61 KVG-LDKFAKSN 71 >gi|78357468|ref|YP_388917.1| 50S ribosomal protein L28 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552043|sp|Q30YM4|RL28_DESDG RecName: Full=50S ribosomal protein L28 gi|78219873|gb|ABB39222.1| LSU ribosomal protein L28P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 69 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + CE K +GN VSH+N KT+RRF+PNL Q + + LRS Sbjct: 1 MGKQCEFCGKKPQTGNNVSHSNIKTKRRFMPNLQSARHQLP-TGQIKTVSVCTRCLRS 57 >gi|312138607|ref|YP_004005943.1| 50S ribosomal protein l28 rpmb [Rhodococcus equi 103S] gi|311887946|emb|CBH47258.1| 50S ribosomal protein L28 RpmB [Rhodococcus equi 103S] Length = 72 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 T + G VSH++ +T RR+ PN+ T ++ LR++ +R+++R G Sbjct: 2 TGRRPGFGRSVSHSHRRTNRRWNPNIQTKTYFLPGEGRRITLRVTPKGIRTIDRDG 57 >gi|120403145|ref|YP_952974.1| 50S ribosomal protein L28 [Mycobacterium vanbaalenii PYR-1] gi|119955963|gb|ABM12968.1| LSU ribosomal protein L28P [Mycobacterium vanbaalenii PYR-1] Length = 64 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VCE+ K G VSH++ +T RR+ PN+ + ++ K+++ + L+ Sbjct: 1 MAAVCEICGKGPGFGKSVSHSHRRTSRRWDPNIQSVRAVAAPGGNKHRVNVCTSCLK 57 >gi|222055240|ref|YP_002537602.1| ribosomal protein L28 [Geobacter sp. FRC-32] gi|254801362|sp|B9M905|RL28_GEOSF RecName: Full=50S ribosomal protein L28 gi|221564529|gb|ACM20501.1| ribosomal protein L28 [Geobacter sp. FRC-32] Length = 63 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VCE+ K GN VSHANNKT R + PNL +I + + + ++ +RS Sbjct: 1 MSKVCEICGKGPSFGNNVSHANNKTSRTWYPNLQKIKAVKNGTVRSI--KVCTRCIRS 56 >gi|254818909|ref|ZP_05223910.1| 50S ribosomal protein L28 [Mycobacterium intracellulare ATCC 13950] Length = 82 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 36/62 (58%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S C++T + GN VSH++ +TRRR+ PN+ T ++ +LR+S ++ ++R Sbjct: 6 SAHCQVTGRRPGFGNAVSHSHRRTRRRWSPNIQLKTYYLPSEGRRIRLRVSAKGIKVIDR 65 Query: 62 QG 63 G Sbjct: 66 DG 67 >gi|309243067|ref|NP_001026530.2| 39S ribosomal protein L28, mitochondrial [Gallus gallus] Length = 251 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + ++ + + + + P L + S+I++ K + ++ L +++ Sbjct: 80 WGGEGWIRGFRYANNDKLSTRVPKIWKPQLFKRQFYSEILDAKLTITVTMRTLDLIDQAY 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + K ++ S L+ +L +++ + Sbjct: 140 GFDFYILKTPKADMCSKLGMDLKRTMLLRLARR 172 >gi|169630361|ref|YP_001704010.1| 50S ribosomal protein L28 [Mycobacterium abscessus ATCC 19977] gi|169242328|emb|CAM63356.1| 50S ribosomal protein L28 [Mycobacterium abscessus] Length = 65 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ K ++ ++ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVNACTSCIK 57 >gi|329911396|ref|ZP_08275500.1| LSU ribosomal protein L28p [Oxalobacteraceae bacterium IMCC9480] gi|327545921|gb|EGF31021.1| LSU ribosomal protein L28p [Oxalobacteraceae bacterium IMCC9480] Length = 66 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSHANNKT+RRFLPNL R + + + LR+S LR +++ G +D L + Sbjct: 1 MVGNNVSHANNKTKRRFLPNLQRRRIFVESENRWVSLRLSNAGLRVIDKLG-IDAVLVDM 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|149248730|ref|XP_001528752.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448706|gb|EDK43094.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 283 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + S NK R PN + S+ M++++++R+S LR++ + GGLD++ Sbjct: 114 GRQRKKSKTCSEFLNKNLRAHKPNRQVAKIWSEAMQRQFKVRVSTKFLRTMTKDGGLDQY 173 Query: 69 LSNS---KKENLSARMRTLRSQILKKMSE 94 L S + + + +R +L +++E Sbjct: 174 LLKSTPGRIKTMGLLGWKMRYNLLNRLAE 202 >gi|268680228|ref|YP_003304659.1| ribosomal protein L28 [Sulfurospirillum deleyianum DSM 6946] gi|268618259|gb|ACZ12624.1| ribosomal protein L28 [Sulfurospirillum deleyianum DSM 6946] Length = 62 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C LT K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARKCALTGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTKKIRIAASTLRTMK 59 Query: 61 RQG 63 + G Sbjct: 60 KNG 62 >gi|269957068|ref|YP_003326857.1| 50S ribosomal protein L28 [Xylanimonas cellulosilytica DSM 15894] gi|269305749|gb|ACZ31299.1| ribosomal protein L28 [Xylanimonas cellulosilytica DSM 15894] Length = 63 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ R+ + + ++ + L+ Sbjct: 1 MAANCDVCGKGPGFGHSISHSHIRTKRRWNPNIQRVRAVVAGTPK--RVNVCTSCLK 55 >gi|197128497|gb|ACH44995.1| putative mitochondrial ribosomal protein L28 variant 2 [Taeniopygia guttata] Length = 248 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + + + + + + P L + S+I++ + ++ L ++ Sbjct: 80 WGGEGWVRGFRYARDDKLSTRLPKTWKPQLFKRQFYSEILDATLTITVTMRTLDLIDAAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + + ++ S L+ +L +++ + Sbjct: 140 GFDFYILKTPRADMCSKLGMDLKRTMLLRLARR 172 >gi|197128496|gb|ACH44994.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia guttata] Length = 248 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + + + + + + P L + S+I++ + ++ L ++ Sbjct: 80 WGGEGWVRGFRYARDDKLSTRLPKTWKPQLFKRQFYSEILDATLTITVTMRTLDLIDAAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + + ++ S L+ +L +++ + Sbjct: 140 GFDFYILKTPRADMCSKLGMDLKRTMLLRLARR 172 >gi|78189699|ref|YP_380037.1| 50S ribosomal protein L28 [Chlorobium chlorochromatii CaD3] gi|123579318|sp|Q3APT1|RL28_CHLCH RecName: Full=50S ribosomal protein L28 gi|78171898|gb|ABB28994.1| LSU ribosomal protein L28P [Chlorobium chlorochromatii CaD3] Length = 72 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN TR RF PNL + + +Q ++++S A++ + Sbjct: 1 MSKVCLLTGKKPKYGNSVSHANNHTRTRFEPNLHTKKIWIEEEKQFVKVKLSAKAMKIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|307154461|ref|YP_003889845.1| 50S ribosomal protein L28 [Cyanothece sp. PCC 7822] gi|306984689|gb|ADN16570.1| ribosomal protein L28 [Cyanothece sp. PCC 7822] Length = 78 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+LT K + +SH++ +T+R NL + ++ +LR+S A++++E Sbjct: 1 MARHCQLTGKKANNAYSISHSHRRTKRLQEANLQWKRIWWAEGKRWVKLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|239908626|ref|YP_002955368.1| 50S ribosomal protein L28 [Desulfovibrio magneticus RS-1] gi|259646734|sp|C4XNY1|RL28_DESMR RecName: Full=50S ribosomal protein L28 gi|239798493|dbj|BAH77482.1| 50S ribosomal protein L28 [Desulfovibrio magneticus RS-1] Length = 68 Score = 72.0 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+++C+ K SGN VSHANNK++RRF PNL + + + + LRS Sbjct: 1 MAKICDHCGKKPQSGNNVSHANNKSKRRFEPNLVSVRAQLPS-GEVKTVTVCTRCLRS 57 >gi|328885304|emb|CCA58543.1| LSU ribosomal protein L28p [Streptomyces venezuelae ATCC 10712] Length = 61 Score = 72.0 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTPRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 55 >gi|156552085|ref|XP_001604861.1| PREDICTED: similar to GA17686-PA [Nasonia vitripennis] Length = 279 Score = 72.0 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 + V+ G + + ++P L + + S+I+++ + ++ AL+ + G D Sbjct: 86 WGGEAVVQGFTKKFKHRRVPHFWVPKLLKSVIYSEILDKYVKTIVTYRALQLIHDNYGFD 145 Query: 67 RFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ +K +L S L+ ++L ++ +K Sbjct: 146 HYVLKTKACDLRSLLALKLKREMLIQLWDK 175 >gi|57237504|ref|YP_178518.1| 50S ribosomal protein L28 [Campylobacter jejuni RM1221] gi|86149067|ref|ZP_01067299.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151668|ref|ZP_01069882.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153713|ref|ZP_01071916.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597135|ref|ZP_01100371.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 84-25] gi|121613410|ref|YP_001000157.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 81-176] gi|157414743|ref|YP_001481999.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 81116] gi|167005115|ref|ZP_02270873.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 81-176] gi|218562105|ref|YP_002343884.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283955872|ref|ZP_06373362.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 1336] gi|14195144|sp|Q9PI58|RL28_CAMJE RecName: Full=50S ribosomal protein L28 gi|67461264|sp|Q5HW17|RL28_CAMJR RecName: Full=50S ribosomal protein L28 gi|166226560|sp|A1VYG6|RL28_CAMJJ RecName: Full=50S ribosomal protein L28 gi|172047068|sp|A8FKN5|RL28_CAMJ8 RecName: Full=50S ribosomal protein L28 gi|57166308|gb|AAW35087.1| ribosomal protein L28 [Campylobacter jejuni RM1221] gi|85840425|gb|EAQ57682.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841297|gb|EAQ58545.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 260.94] gi|85842674|gb|EAQ59886.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250183|gb|EAQ73141.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190824|gb|EAQ94797.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359811|emb|CAL34598.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157385707|gb|ABV52022.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 81116] gi|283792532|gb|EFC31311.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 1336] gi|284925717|gb|ADC28069.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni IA3902] gi|315057870|gb|ADT72199.1| LSU ribosomal protein L28p [Campylobacter jejuni subsp. jejuni S3] gi|315928222|gb|EFV07539.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315931111|gb|EFV10085.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 327] Length = 64 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|315655511|ref|ZP_07908410.1| 50S ribosomal protein L28 [Mobiluncus curtisii ATCC 51333] gi|315490166|gb|EFU79792.1| 50S ribosomal protein L28 [Mobiluncus curtisii ATCC 51333] Length = 79 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC++ K G VSH++ + +RRF PN+ R+ I + + L + ++S Sbjct: 15 MAAVCDVCGKGPGFGMSVSHSHRRNKRRFNPNIQRVRAIVEGTPRH--LNVCTKCIKS 70 >gi|283954257|ref|ZP_06371781.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 414] gi|283794275|gb|EFC33020.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 414] Length = 64 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTKKMRIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|268533978|ref|XP_002632119.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae] gi|187033731|emb|CAP27366.1| hypothetical protein CBG_06974 [Caenorhabditis briggsae AF16] Length = 310 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 8/88 (9%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 TKK ++ V + F P L + L S+I+++ ++ +++ A+R ++ GLD Sbjct: 119 TKKKILPRYWVP-------KLFFPALKTVVLHSEILDKYMKVTVTERAMRLIDENFGLDY 171 Query: 68 FLSNSKKENL-SARMRTLRSQILKKMSE 94 ++ SK+ +L S L+ ++L ++ Sbjct: 172 YILKSKEIDLDSKFANLLKREMLLTLAA 199 >gi|219681464|ref|YP_002467849.1| 50S ribosomal protein L28 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682020|ref|YP_002468404.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471139|ref|ZP_05635138.1| 50S ribosomal protein L28 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254801346|sp|B8D8P0|RL28_BUCA5 RecName: Full=50S ribosomal protein L28 gi|254801347|sp|B8D6Z4|RL28_BUCAT RecName: Full=50S ribosomal protein L28 gi|219621753|gb|ACL29909.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624307|gb|ACL30462.1| 50S ribosomal protein L28 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085828|gb|ADP65910.1| 50S ribosomal protein L28 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086401|gb|ADP66482.1| 50S ribosomal protein L28 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311086980|gb|ADP67060.1| 50S ribosomal protein L28 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087556|gb|ADP67635.1| 50S ribosomal protein L28 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 75 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN SHA N T+R+FL N+ ++ +LR+S +R ++ Sbjct: 1 MSRICQITGKKRMIGNNRSHALNATKRKFLINIQYHRFWIADEKRFIKLRVSTNGMRYID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|310659149|ref|YP_003936870.1| 50S ribosomal protein L28 [Clostridium sticklandii DSM 519] gi|308825927|emb|CBH21965.1| ribosomal protein L28 [Clostridium sticklandii] Length = 63 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVCE+ K +SGN VSH+N T+R + PNL + + + + ++ LRS Sbjct: 1 MARVCEVCGKGKVSGNNVSHSNRHTKRTWSPNLRNVKAVVEGTPKTI--KVCTRCLRS 56 >gi|118617567|ref|YP_905899.1| 50S ribosomal protein L28 [Mycobacterium ulcerans Agy99] gi|183981753|ref|YP_001850044.1| 50S ribosomal protein L28 RpmB2_1 [Mycobacterium marinum M] gi|118569677|gb|ABL04428.1| 50S ribosomal protein L28 RpmB2_1 [Mycobacterium ulcerans Agy99] gi|183175079|gb|ACC40189.1| 50S ribosomal protein L28 RpmB2_1 [Mycobacterium marinum M] Length = 64 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ K +L + ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVRAVTRPGGNKKRLNVCTSCIK 57 >gi|298346965|ref|YP_003719652.1| 50S ribosomal protein L28 [Mobiluncus curtisii ATCC 43063] gi|304389324|ref|ZP_07371289.1| 50S ribosomal protein L28 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656582|ref|ZP_07909469.1| 50S ribosomal protein L28 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298237026|gb|ADI68158.1| 50S ribosomal protein L28 [Mobiluncus curtisii ATCC 43063] gi|304327442|gb|EFL94675.1| 50S ribosomal protein L28 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492537|gb|EFU82141.1| 50S ribosomal protein L28 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 79 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC++ K G VSH++ + +RRF PN+ R+ I + + L + ++S Sbjct: 15 MAAVCDVCGKGPGFGMSVSHSHRRNKRRFNPNIQRVRAIVEGTPRH--LNVCTKCIKS 70 >gi|298490729|ref|YP_003720906.1| 50S ribosomal protein L28 ['Nostoc azollae' 0708] gi|298232647|gb|ADI63783.1| ribosomal protein L28 ['Nostoc azollae' 0708] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + VSH++ +T+R NL + + +L++S A++++E Sbjct: 1 MSRRCELTGKKANNAMAVSHSHRRTKRLQHANLQSKRVWWAGGNRWVRLKLSTKAIKTLE 60 Query: 61 RQG 63 +G Sbjct: 61 TKG 63 >gi|75906367|ref|YP_320663.1| 50S ribosomal protein L28 [Anabaena variabilis ATCC 29413] gi|123610919|sp|Q3MGW8|RL28_ANAVT RecName: Full=50S ribosomal protein L28 gi|75700092|gb|ABA19768.1| LSU ribosomal protein L28P [Anabaena variabilis ATCC 29413] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T+R NL + + +L++S A++++E Sbjct: 1 MSRRCDLTGKKANNAFAVSHSHRRTKRLQQANLQSKRVWWPSGNRWVKLKLSTKAIKTLE 60 Query: 61 RQG 63 +G Sbjct: 61 VKG 63 >gi|126661297|ref|ZP_01732367.1| 50S ribosomal protein L28 [Cyanothece sp. CCY0110] gi|126617421|gb|EAZ88220.1| 50S ribosomal protein L28 [Cyanothece sp. CCY0110] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MSRKCQLTGKKANNAFAVSHSHRRTKKLQEANLQWKRVWWPEGNRWVRLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|301382570|ref|ZP_07230988.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato Max13] gi|302063063|ref|ZP_07254604.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato K40] gi|302133589|ref|ZP_07259579.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302184916|ref|ZP_07261589.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. syringae 642] gi|320322244|gb|EFW78340.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. glycinea str. B076] gi|320331893|gb|EFW87831.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. glycinea str. race 4] gi|331018551|gb|EGH98607.1| 50S ribosomal protein L28 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 65 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 35/51 (68%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 M+GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++++G Sbjct: 1 MTGNNISHANNKTRRRFLPNLQHHRFWVEGEKRFVRLRVSAKGMRIIDKRG 51 >gi|224282407|ref|ZP_03645729.1| 50S ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] gi|310286849|ref|YP_003938107.1| 50S ribosomal protein L28 [Bifidobacterium bifidum S17] gi|311063751|ref|YP_003970476.1| 50S ribosomal protein L28P RpmB [Bifidobacterium bifidum PRL2010] gi|313139551|ref|ZP_07801744.1| 50S ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] gi|309250785|gb|ADO52533.1| 50S ribosomal protein L28 [Bifidobacterium bifidum S17] gi|310866070|gb|ADP35439.1| RpmB LSU ribosomal protein L28P [Bifidobacterium bifidum PRL2010] gi|313132061|gb|EFR49678.1| 50S ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] Length = 64 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K G VSH++ + +R F PNL + D Q ++R+ L+ Sbjct: 1 MAARCAVCGKGPQVGYTVSHSHIRNKRTFRPNLQPVRTTVD--GQNVRVRVCVKCLK 55 >gi|218247551|ref|YP_002372922.1| 50S ribosomal protein L28 [Cyanothece sp. PCC 8801] gi|257061114|ref|YP_003139002.1| 50S ribosomal protein L28 [Cyanothece sp. PCC 8802] gi|226738064|sp|B7K5N3|RL28_CYAP8 RecName: Full=50S ribosomal protein L28 gi|218168029|gb|ACK66766.1| ribosomal protein L28 [Cyanothece sp. PCC 8801] gi|256591280|gb|ACV02167.1| ribosomal protein L28 [Cyanothece sp. PCC 8802] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MSRKCQLTGKKANNAYAVSHSHRRTKKLQEANLQWKRVWWPEGNRWVRLRLSTKAIKTLE 60 Query: 61 RQG 63 +G Sbjct: 61 TKG 63 >gi|193215033|ref|YP_001996232.1| 50S ribosomal protein L28 [Chloroherpeton thalassium ATCC 35110] gi|226738052|sp|B3QZ92|RL28_CHLT3 RecName: Full=50S ribosomal protein L28 gi|193088510|gb|ACF13785.1| ribosomal protein L28 [Chloroherpeton thalassium ATCC 35110] Length = 74 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN R RF PN+ + + ++ ++++S A++ + Sbjct: 1 MSKVCILTGKKHQYGNTVSHANNHRRTRFEPNIQAKRIWLEEEKRWVKVKLSAKAIKIIS 60 Query: 61 RQG 63 ++G Sbjct: 61 KRG 63 >gi|317125443|ref|YP_004099555.1| 50S ribosomal protein L28P [Intrasporangium calvum DSM 43043] gi|315589531|gb|ADU48828.1| LSU ribosomal protein L28P [Intrasporangium calvum DSM 43043] Length = 62 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ R+ + + ++ + L+ Sbjct: 1 MAANCDVCGKGPSFGHNISHSHRRTKRRWNPNIQRVRTLVGGV-TPKRINVCTSCLK 56 >gi|167630215|ref|YP_001680714.1| 50S ribosomal protein l28 [Heliobacterium modesticaldum Ice1] gi|226694926|sp|B0TGU2|RL28_HELMI RecName: Full=50S ribosomal protein L28 gi|167592955|gb|ABZ84703.1| 50S ribosomal protein l28 [Heliobacterium modesticaldum Ice1] Length = 63 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C + K V G +VSH++ +T+R + PNL R+ + +L + LRS Sbjct: 1 MARKCAICGKGVQMGMQVSHSHIRTKRTWSPNLQRVRAVVK--GAPVRLNVCTRCLRS 56 >gi|39997332|ref|NP_953283.1| 50S ribosomal protein L28 [Geobacter sulfurreducens PCA] gi|67461477|sp|Q74AW5|RL28_GEOSL RecName: Full=50S ribosomal protein L28 gi|39984223|gb|AAR35610.1| ribosomal protein L28 [Geobacter sulfurreducens PCA] gi|298506269|gb|ADI84992.1| ribosomal protein L28 [Geobacter sulfurreducens KN400] Length = 63 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VCE+ K GN VSHANNKTR + PNL ++ + +++ +RS Sbjct: 1 MSKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAV--RNGSVKTIKVCTRCIRS 56 >gi|256397127|ref|YP_003118691.1| 50S ribosomal protein L28 [Catenulispora acidiphila DSM 44928] gi|256363353|gb|ACU76850.1| ribosomal protein L28 [Catenulispora acidiphila DSM 44928] Length = 65 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ + + + + ++ ++ Sbjct: 1 MAANCDVCGKGPGFGHNISHSHRRTKRRWNPNIQTVRAVVNGTPK--RVNACTSCIK 55 >gi|194335825|ref|YP_002017619.1| ribosomal protein L28 [Pelodictyon phaeoclathratiforme BU-1] gi|226699142|sp|B4SE11|RL28_PELPB RecName: Full=50S ribosomal protein L28 gi|194308302|gb|ACF43002.1| ribosomal protein L28 [Pelodictyon phaeoclathratiforme BU-1] Length = 72 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K + GN VSHANN R RF PNL + + ++ ++++S A+ + Sbjct: 1 MSKVCLLTGKRPIYGNTVSHANNHVRTRFEPNLHTKRIWIEEEKRFVKVKLSAKAMTIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|288574877|ref|ZP_06393234.1| ribosomal protein L28 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570618|gb|EFC92175.1| ribosomal protein L28 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 64 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC+ K ++GN VSH++ KTRRR+LPNL + + + +LRI LRS Sbjct: 1 MSKVCDCCGKGPVTGNSVSHSHRKTRRRWLPNLHSVRVDLGA-GETRKLRICSRCLRS 57 >gi|157413325|ref|YP_001484191.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9215] gi|166987914|sp|A8G4S4|RL28_PROM2 RecName: Full=50S ribosomal protein L28 gi|157387900|gb|ABV50605.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9215] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L + ++ ++IS AL+S++ Sbjct: 1 MSRVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQ 60 Query: 61 RQGGLDRFLSNS 72 + G LD+F ++ Sbjct: 61 KVG-LDKFAKSN 71 >gi|315638422|ref|ZP_07893599.1| 50S ribosomal protein L28 [Campylobacter upsaliensis JV21] gi|315481413|gb|EFU72040.1| 50S ribosomal protein L28 [Campylobacter upsaliensis JV21] Length = 64 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R+C++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRITLED-GTTRKVRIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|330812586|ref|YP_004357048.1| 50S ribosomal protein L28 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380694|gb|AEA72044.1| 50S ribosomal protein L28 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 65 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 35/51 (68%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 M+GN +SHANNKTRRRFLPNL + ++ +LR+S +R ++++G Sbjct: 1 MTGNNISHANNKTRRRFLPNLQHHRFWVEEEKRFVRLRVSAKGMRIIDKRG 51 >gi|194333387|ref|YP_002015247.1| 50S ribosomal protein L28 [Prosthecochloris aestuarii DSM 271] gi|226699146|sp|B4S5K3|RL28_PROA2 RecName: Full=50S ribosomal protein L28 gi|194311205|gb|ACF45600.1| ribosomal protein L28 [Prosthecochloris aestuarii DSM 271] Length = 72 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN R+RF PNL + + ++ ++++S AL+ + Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRKRFEPNLHTKRVWLEEEKRWVKVKVSAKALKIMS 60 Query: 61 RQG 63 RQG Sbjct: 61 RQG 63 >gi|225873415|ref|YP_002754874.1| ribosomal protein L28 [Acidobacterium capsulatum ATCC 51196] gi|254801492|sp|C1F7R8|RL28_ACIC5 RecName: Full=50S ribosomal protein L28 gi|225792205|gb|ACO32295.1| ribosomal protein L28 [Acidobacterium capsulatum ATCC 51196] Length = 63 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VCE+ K GN +SHA+N TRRR+ NL + + ++R+ ++S Sbjct: 1 MAQVCEICGKGPQFGNNISHAHNVTRRRWNVNLRPVKVKVGPT-ANKRVRVCTSCIKS 57 >gi|297202614|ref|ZP_06920011.1| ribosomal protein L28 [Streptomyces sviceus ATCC 29083] gi|297148154|gb|EFH28858.1| ribosomal protein L28 [Streptomyces sviceus ATCC 29083] Length = 61 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN VS ++ +T RR+ PN+ + + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNSVSFSHRRTSRRWNPNIQHVRTVVGGTPK--RLNVCTSCIK 55 >gi|67922358|ref|ZP_00515870.1| Ribosomal protein L28 [Crocosphaera watsonii WH 8501] gi|67855809|gb|EAM51056.1| Ribosomal protein L28 [Crocosphaera watsonii WH 8501] Length = 78 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MSRRCQLTGKKANNAFAVSHSHRRTKKLQEANLQWKRVWWPEGNRWVKLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|148265186|ref|YP_001231892.1| 50S ribosomal protein L28 [Geobacter uraniireducens Rf4] gi|189029442|sp|A5G6A1|RL28_GEOUR RecName: Full=50S ribosomal protein L28 gi|146398686|gb|ABQ27319.1| LSU ribosomal protein L28P [Geobacter uraniireducens Rf4] Length = 63 Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS++CE+ K GN VSHANNKT R + PNL +I + + + ++ +RS Sbjct: 1 MSKICEICGKGPSFGNNVSHANNKTSRIWYPNLQKIKAVKNGTVRSI--KVCTRCIRS 56 >gi|57168586|ref|ZP_00367719.1| ribosomal protein L28 [Campylobacter coli RM2228] gi|305433005|ref|ZP_07402161.1| 50S ribosomal protein L28 [Campylobacter coli JV20] gi|57020091|gb|EAL56768.1| ribosomal protein L28 [Campylobacter coli RM2228] gi|304443706|gb|EFM36363.1| 50S ribosomal protein L28 [Campylobacter coli JV20] Length = 64 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R+C++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|303245780|ref|ZP_07332063.1| ribosomal protein L28 [Desulfovibrio fructosovorans JJ] gi|302493043|gb|EFL52908.1| ribosomal protein L28 [Desulfovibrio fructosovorans JJ] Length = 68 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+++CE K SGN VSHANNK++RRF PNL ++ + + + LRS Sbjct: 1 MAKICEHCGKKPQSGNNVSHANNKSKRRFSPNLVKVRAQLPS-GEVTTMTVCTRCLRS 57 >gi|169627438|ref|YP_001701087.1| 50S ribosomal protein L28-2 [Mycobacterium abscessus ATCC 19977] gi|169239405|emb|CAM60433.1| 50S ribosomal protein L28-2 [Mycobacterium abscessus] Length = 82 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 38/62 (61%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 S CE+T ++ GN VSH++ +TRRR+ PN+ T +++ +LR+S ++ ++R Sbjct: 6 SAHCEVTGRSPGFGNAVSHSHRRTRRRWSPNIQLKTYYLPSEDRRIKLRVSTKGIKVIDR 65 Query: 62 QG 63 G Sbjct: 66 DG 67 >gi|153951942|ref|YP_001398512.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. doylei 269.97] gi|166226559|sp|A7H4T2|RL28_CAMJD RecName: Full=50S ribosomal protein L28 gi|152939388|gb|ABS44129.1| ribosomal protein L28 [Campylobacter jejuni subsp. doylei 269.97] Length = 64 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R+C++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 1 MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTKKMRIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|308459187|ref|XP_003091918.1| hypothetical protein CRE_31545 [Caenorhabditis remanei] gi|308254815|gb|EFO98767.1| hypothetical protein CRE_31545 [Caenorhabditis remanei] Length = 358 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 48/90 (53%), Gaps = 8/90 (8%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 TKK ++ V + F P L L S+++++ ++ +++ A+R ++ GLD Sbjct: 167 TKKKILPRYWVP-------KLFFPTLKTAVLYSEVLDKYIKVTVTERAMRLIDEHFGLDY 219 Query: 68 FLSNSKKENL-SARMRTLRSQILKKMSEKS 96 ++ S++ +L S +L+ +IL ++ +S Sbjct: 220 YILQSQEIDLDSKFANSLKREILLTLATES 249 >gi|118475728|ref|YP_892139.1| 50S ribosomal protein L28 [Campylobacter fetus subsp. fetus 82-40] gi|166226557|sp|A0RPK6|RL28_CAMFF RecName: Full=50S ribosomal protein L28 gi|118414954|gb|ABK83374.1| ribosomal protein L28 [Campylobacter fetus subsp. fetus 82-40] Length = 63 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C +T K M GN VSHANN+T+RRF+PNL + ++ + ++R++ LR+++ Sbjct: 1 MSKRCAITGKGPMVGNNVSHANNRTKRRFMPNLRTVRVMLED-GTTRKIRVAASTLRTMK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|290958449|ref|YP_003489631.1| 50S ribosomal protein L28 [Streptomyces scabiei 87.22] gi|260647975|emb|CBG71080.1| putative 50S ribosomal protein L28 [Streptomyces scabiei 87.22] Length = 73 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%) Query: 6 ELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 LT GN++SH++ +T RRF PN+ + +LR+S +++V+ G Sbjct: 1 MLTGARPGFGNRISHSHRRTSRRFDPNIQSKRYWLPSENRHVRLRLSARGIKTVDVIG 58 >gi|154509015|ref|ZP_02044657.1| hypothetical protein ACTODO_01532 [Actinomyces odontolyticus ATCC 17982] gi|293192357|ref|ZP_06609468.1| ribosomal protein L28 [Actinomyces odontolyticus F0309] gi|315604398|ref|ZP_07879464.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 180 str. F0310] gi|153798649|gb|EDN81069.1| hypothetical protein ACTODO_01532 [Actinomyces odontolyticus ATCC 17982] gi|292820272|gb|EFF79266.1| ribosomal protein L28 [Actinomyces odontolyticus F0309] gi|315314104|gb|EFU62155.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 180 str. F0310] Length = 63 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC++ K G VSH++ +T RR+ PN+ R+ + + + +L + L+S Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHVRTNRRWNPNIQRVRALVNGTPK--RLNVCTKCLKS 56 >gi|15616708|ref|NP_239920.1| 50S ribosomal protein L28 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134521|sp|P57188|RL28_BUCAI RecName: Full=50S ribosomal protein L28 gi|25295494|pir||F84939 50S ribosomal protein L28 [imported] - Buchnera sp. (strain APS) gi|10038771|dbj|BAB12806.1| 50S ribosomal protein L28 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 75 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K M GN SHA N T+R+FL N+ ++ +L +S +R ++ Sbjct: 1 MSRICQITGKKRMIGNNRSHALNATKRKFLINIQYHRFWIADEKRFIKLHVSTNGMRYID 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|197128495|gb|ACH44993.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia guttata] gi|197128498|gb|ACH44996.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia guttata] Length = 248 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + + + + + + P L + S+I++ + ++ L ++ Sbjct: 80 WGGEGWVRGFRYARDDXLSTRLPKTWKPQLFKRQFYSEILDATLTITVTMRTLDLIDAAF 139 Query: 64 GLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + + ++ S L+ +L +++ + Sbjct: 140 GFDFYILKTPRADMCSKLGMDLKRTMLLRLARR 172 >gi|254495923|ref|ZP_05108831.1| 50S ribosomal protein L28 [Legionella drancourtii LLAP12] gi|254354801|gb|EET13428.1| 50S ribosomal protein L28 [Legionella drancourtii LLAP12] Length = 66 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GNKVSHANNKTRRRFLPN+ + + + LR+S +R +++ G + L Sbjct: 1 MTGNKVSHANNKTRRRFLPNIQNHSFWVEEENRFVTLRVSTKGMRIIDKLG-IKAVLDKI 59 Query: 73 KKE 75 + Sbjct: 60 RAN 62 >gi|326773649|ref|ZP_08232932.1| ribosomal protein L28 [Actinomyces viscosus C505] gi|326636879|gb|EGE37782.1| ribosomal protein L28 [Actinomyces viscosus C505] Length = 63 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K + G VSH++ +T RR+ PN+ R+ + +L + L+ Sbjct: 1 MAAVCDVCGKGPIFGKSVSHSHVRTNRRWNPNIQRVRALVG--GAPKRLNVCTSCLK 55 >gi|218290484|ref|ZP_03494604.1| ribosomal protein L28 [Alicyclobacillus acidocaldarius LAA1] gi|218239505|gb|EED06700.1| ribosomal protein L28 [Alicyclobacillus acidocaldarius LAA1] Length = 63 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R CE+ + GNK+SH++ T+RR+ PNL + D ++R+ L+ Sbjct: 1 MARRCEVCGRGPQVGNKISHSHILTKRRWYPNLQTVRAEVD--GSVKRIRVCTRCLK 55 >gi|126696295|ref|YP_001091181.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9301] gi|166226598|sp|A3PCV5|RL28_PROM0 RecName: Full=50S ribosomal protein L28 gi|126543338|gb|ABO17580.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9301] Length = 78 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L + ++ ++IS AL+S++ Sbjct: 1 MSRVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQ 60 Query: 61 RQGGLDRFLSNS 72 + G LD+F ++ Sbjct: 61 KVG-LDKFAKSN 71 >gi|227495859|ref|ZP_03926170.1| 50S ribosomal protein L28 [Actinomyces urogenitalis DSM 15434] gi|320533340|ref|ZP_08034034.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337] gi|325068481|ref|ZP_08127154.1| ribosomal protein L28 [Actinomyces oris K20] gi|329947087|ref|ZP_08294463.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386] gi|226834616|gb|EEH66999.1| 50S ribosomal protein L28 [Actinomyces urogenitalis DSM 15434] gi|320134455|gb|EFW26709.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337] gi|328526264|gb|EGF53281.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386] Length = 63 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K + G VSH++ +T RR+ PN+ R+ + + +L + L+ Sbjct: 1 MAAVCDVCGKGPIFGKSVSHSHVRTNRRWNPNIQRVRALVN--GAPKRLNVCTSCLK 55 >gi|110764475|ref|XP_395930.3| PREDICTED: 39S ribosomal protein L28, mitochondrial [Apis mellifera] Length = 274 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Query: 22 NNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL 77 NK RR + P L + + S++++ + I+ + + G D +L + +L Sbjct: 97 KNKYARRHPHFWFPTLKKSVVYSEVLDTYLSVVITNRTIDLINEHYGFDHYLLKTPACDL 156 Query: 78 -SARMRTLRSQILKKMSEK 95 S ++ QIL +++K Sbjct: 157 KSELALKIKRQILLSLADK 175 >gi|226502588|ref|NP_001148032.1| LOC100281641 [Zea mays] gi|195615378|gb|ACG29519.1| 50S ribosomal protein L28 [Zea mays] Length = 141 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 66 RVCPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEAGKRFVKLRLSTKALKTIEKH 125 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 126 G-LDAVARKA 134 >gi|117928789|ref|YP_873340.1| 50S ribosomal protein L28 [Acidothermus cellulolyticus 11B] gi|166226531|sp|A0LV94|RL28_ACIC1 RecName: Full=50S ribosomal protein L28 gi|117649252|gb|ABK53354.1| LSU ribosomal protein L28P [Acidothermus cellulolyticus 11B] Length = 62 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ R+ + ++ + L+ Sbjct: 1 MAAVCDICGKGPGFGMAVSHSHRRTHRRWNPNIQRVRALIGR-GTYKRINVCTSCLK 56 >gi|254392469|ref|ZP_05007649.1| 50S ribosomal protein L28 [Streptomyces clavuligerus ATCC 27064] gi|297191827|ref|ZP_06909225.1| 50S ribosomal protein L28 [Streptomyces pristinaespiralis ATCC 25486] gi|326443696|ref|ZP_08218430.1| 50S ribosomal protein L28 [Streptomyces clavuligerus ATCC 27064] gi|197706136|gb|EDY51948.1| 50S ribosomal protein L28 [Streptomyces clavuligerus ATCC 27064] gi|197722016|gb|EDY65924.1| 50S ribosomal protein L28 [Streptomyces pristinaespiralis ATCC 25486] Length = 61 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 55 >gi|70943001|ref|XP_741599.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520081|emb|CAH84010.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 279 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + PN+ + ++S+I+ +RI+ AL +++ GG D ++ + E Sbjct: 60 KVSYSLKKTRIKIKPNVFKKHIVSNILNTIIPSVRITTSALHAIDDAGGFDNYILRTPPE 119 Query: 76 NL-SARMRTLRSQI 88 L S LR+ + Sbjct: 120 ELRSNFGEKLRNVM 133 >gi|313672663|ref|YP_004050774.1| LSU ribosomal protein l28p [Calditerrivibrio nitroreducens DSM 19672] gi|312939419|gb|ADR18611.1| LSU ribosomal protein L28P [Calditerrivibrio nitroreducens DSM 19672] Length = 63 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C++ K M G+ +SHA+N TRR F PNL ++ +++ ++++ ++ Sbjct: 1 MARRCDICGKGPMFGHNISHAHNVTRRVFYPNLHKVKVLNPD-GTVARIKVCTKCIK 56 >gi|159903399|ref|YP_001550743.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9211] gi|226699147|sp|A9BAC7|RL28_PROM4 RecName: Full=50S ribosomal protein L28 gi|159888575|gb|ABX08789.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9211] Length = 78 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC+L+ +G VSH++ +T++ NL + L + ++ ++R++ L++++ Sbjct: 1 MSRVCDLSGTRANNGMAVSHSHIRTKKLQQANLQQRKLWWEEGKKWIKVRVTTRTLKTIQ 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|312897746|ref|ZP_07757162.1| ribosomal protein L28 [Megasphaera micronuciformis F0359] gi|310621130|gb|EFQ04674.1| ribosomal protein L28 [Megasphaera micronuciformis F0359] Length = 63 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ CE+ K MSG VSH++ KT+R + PN+ R+ I D + ++ + LRS Sbjct: 1 MANYCEICGKGTMSGMNVSHSHLKTKRTWKPNIQRVRAIVD--GEAKRVNVCTRCLRS 56 >gi|300783673|ref|YP_003763964.1| 50S ribosomal protein L28 [Amycolatopsis mediterranei U32] gi|299793187|gb|ADJ43562.1| large subunit ribosomal protein L28 [Amycolatopsis mediterranei U32] Length = 63 Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + ++K +L + ++ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAKVGVSQRK-RLNVCTSCIK 56 >gi|242034375|ref|XP_002464582.1| hypothetical protein SORBIDRAFT_01g021250 [Sorghum bicolor] gi|241918436|gb|EER91580.1| hypothetical protein SORBIDRAFT_01g021250 [Sorghum bicolor] Length = 145 Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVC T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 70 RVCPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEAGKRFVKLRLSTKALKTIEKH 129 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 130 G-LDAVARKA 138 >gi|295111735|emb|CBL28485.1| LSU ribosomal protein L28P [Synergistetes bacterium SGP1] Length = 73 Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C+ + SGN VSH+N TRRR+L NL + + + +++R+ LRS Sbjct: 3 MAKFCQCCGRGPASGNAVSHSNRHTRRRWLVNLQSVRIDAGD-GTTFKVRVCTKCLRS 59 >gi|213405036|ref|XP_002173290.1| 54S ribosomal protein L24 [Schizosaccharomyces japonicus yFS275] gi|212001337|gb|EEB06997.1| 54S ribosomal protein L24 [Schizosaccharomyces japonicus yFS275] Length = 194 Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 + G V KT R + N L SD ++ ++L + L+++++ GGLD + Sbjct: 50 GSSTYYGKNVPDKGPKTLRTWEVNAHTKRLWSDALQMHFRLNVRARVLKTIKKDGGLDEY 109 Query: 69 LSN---SKKENLSARMRTLRSQILKKM 92 L S+ + L R LRS + K+ Sbjct: 110 LLKSTPSRLKQLGLRGTELRSLVAYKL 136 >gi|296140529|ref|YP_003647772.1| ribosomal protein L28 [Tsukamurella paurometabola DSM 20162] gi|296028663|gb|ADG79433.1| ribosomal protein L28 [Tsukamurella paurometabola DSM 20162] Length = 63 Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + Q +L + ++ Sbjct: 1 MAAVCDVCDKGPGFGKSVSHSHRRTNRRWNPNIQTVRAQV-APGQTKRLNVCTSCIK 56 >gi|224102207|ref|XP_002312590.1| predicted protein [Populus trichocarpa] gi|222852410|gb|EEE89957.1| predicted protein [Populus trichocarpa] Length = 126 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT++ NL + + ++ +LR+S AL++ +++ Sbjct: 51 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKT-KQK 109 Query: 63 GGLDRFLSNS 72 GLD + Sbjct: 110 NGLDAVAKKA 119 >gi|284992419|ref|YP_003410973.1| 50S ribosomal protein L28 [Geodermatophilus obscurus DSM 43160] gi|284065664|gb|ADB76602.1| ribosomal protein L28 [Geodermatophilus obscurus DSM 43160] Length = 63 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + ++ ++ +R Sbjct: 1 MAAVCDVCGKGPGFGMSVSHSHRRTPRRWNPNIQSVRALVAPGNRR-RINACTSCIR 56 >gi|115461559|ref|NP_001054379.1| Os05g0101400 [Oryza sativa Japonica Group] gi|57863893|gb|AAG03094.2|AC073405_10 putative ribosomal protein L28 [Oryza sativa Japonica Group] gi|57863847|gb|AAW56888.1| unknown protein [Oryza sativa Japonica Group] gi|113577930|dbj|BAF16293.1| Os05g0101400 [Oryza sativa Japonica Group] gi|215695247|dbj|BAG90438.1| unnamed protein product [Oryza sativa Japonica Group] gi|222629862|gb|EEE61994.1| hypothetical protein OsJ_16775 [Oryza sativa Japonica Group] Length = 137 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C T K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 62 RICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEGKRFVKLRLSTKALKTIEKH 121 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 122 G-LDAVAKKA 130 >gi|17536507|ref|NP_493672.1| hypothetical protein T25D3.2 [Caenorhabditis elegans] gi|3319437|gb|AAC26291.1| Hypothetical protein T25D3.2 [Caenorhabditis elegans] Length = 310 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 8/90 (8%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 TKK ++ V + F P L + L S+I+++ ++ +++ A+R ++ GLD Sbjct: 119 TKKKILPRYWVP-------KLFFPALKNVVLYSEILDKYIKVTVTERAMRLIDEHFGLDY 171 Query: 68 FLSNSKKENL-SARMRTLRSQILKKMSEKS 96 ++ SK+ +L S +L+ ++L ++ +S Sbjct: 172 YILESKEIDLDSKFANSLKREMLLTLTTES 201 >gi|189425341|ref|YP_001952518.1| 50S ribosomal protein L28 [Geobacter lovleyi SZ] gi|226694925|sp|B3E4R2|RL28_GEOLS RecName: Full=50S ribosomal protein L28 gi|189421600|gb|ACD95998.1| ribosomal protein L28 [Geobacter lovleyi SZ] Length = 64 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE+ K +GN VSHANNKTR + PNL ++ + +++ +RS Sbjct: 1 MSRKCEICGKGPSTGNNVSHANNKTRTTWYPNLQKVKAKA-ANGSVSTIKVCTRCIRS 57 >gi|221632124|ref|YP_002521345.1| 50S ribosomal protein L28 [Thermomicrobium roseum DSM 5159] gi|254801384|sp|B9L2A7|RL28_THERP RecName: Full=50S ribosomal protein L28 gi|221156171|gb|ACM05298.1| ribosomal protein L28 [Thermomicrobium roseum DSM 5159] Length = 63 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 CEL K M G+ VSH+N KT R+F PN+ R+T+I + + + ++RI LR++ ++ Sbjct: 4 CELCGKKPMFGHNVSHSNRKTNRKFKPNVQRVTVILNGVPK--RMRICTRCLRTLYKE 59 >gi|290566745|gb|ADD39722.1| mitochondrial ribosomal protein L28 [Trichinella spiralis] Length = 253 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 46/99 (46%), Gaps = 10/99 (10%) Query: 7 LTKKTVMSGNKVSHANNKTRRR---------FLPNLCRITLISDIMEQKYQLRISKCALR 57 + ++ G K+S+ + +R + P L + L S+I+++ + ++ L+ Sbjct: 93 WGGEGIVKGYKLSNIPPRRKRFLPRFWLPRFWFPTLMKKVLYSEILDKYMLVTVTSRTLQ 152 Query: 58 SVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 ++ GLD +L + + +L S L+ +L ++ K Sbjct: 153 LIDENQGLDYYLLRTNEVDLCSKLGCKLKRILLLALARK 191 >gi|119510400|ref|ZP_01629534.1| 50S ribosomal protein L28 [Nodularia spumigena CCY9414] gi|119464929|gb|EAW45832.1| 50S ribosomal protein L28 [Nodularia spumigena CCY9414] Length = 78 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT K + VSH++ +T+R NL + + ++++S A++S+E Sbjct: 1 MSRRCELTGKKANNAFAVSHSHRRTKRLQHANLQNKRVWWAGGNRWVRMKLSTKAIKSLE 60 Query: 61 RQG 63 +G Sbjct: 61 TKG 63 >gi|29829217|ref|NP_823851.1| 50S ribosomal protein L28 [Streptomyces avermitilis MA-4680] gi|239928715|ref|ZP_04685668.1| 50S ribosomal protein L28 [Streptomyces ghanaensis ATCC 14672] gi|291437039|ref|ZP_06576429.1| 50S ribosomal protein L28 [Streptomyces ghanaensis ATCC 14672] gi|302558170|ref|ZP_07310512.1| 50S ribosomal protein L28 [Streptomyces griseoflavus Tu4000] gi|329936752|ref|ZP_08286459.1| 50S ribosomal protein L28 [Streptomyces griseoaurantiacus M045] gi|29606323|dbj|BAC70386.1| putative ribosomal protein L28 [Streptomyces avermitilis MA-4680] gi|291339934|gb|EFE66890.1| 50S ribosomal protein L28 [Streptomyces ghanaensis ATCC 14672] gi|302475788|gb|EFL38881.1| 50S ribosomal protein L28 [Streptomyces griseoflavus Tu4000] gi|329303982|gb|EGG47865.1| 50S ribosomal protein L28 [Streptomyces griseoaurantiacus M045] Length = 61 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTPRRWNPNIQRVRTVVGGTPK--RVNACTSCIK 55 >gi|171741408|ref|ZP_02917215.1| hypothetical protein BIFDEN_00491 [Bifidobacterium dentium ATCC 27678] gi|283455244|ref|YP_003359808.1| 50S ribosomal protein L28P [Bifidobacterium dentium Bd1] gi|306823694|ref|ZP_07457069.1| 50S ribosomal protein L28 [Bifidobacterium dentium ATCC 27679] gi|309802962|ref|ZP_07697063.1| ribosomal protein L28 [Bifidobacterium dentium JCVIHMP022] gi|171277022|gb|EDT44683.1| hypothetical protein BIFDEN_00491 [Bifidobacterium dentium ATCC 27678] gi|283101878|gb|ADB08984.1| rpmB LSU ribosomal protein L28P [Bifidobacterium dentium Bd1] gi|304553401|gb|EFM41313.1| 50S ribosomal protein L28 [Bifidobacterium dentium ATCC 27679] gi|308220429|gb|EFO76740.1| ribosomal protein L28 [Bifidobacterium dentium JCVIHMP022] Length = 64 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ + +R F PNL + D + ++R+ L+ Sbjct: 1 MAARCAVCGKGPQTGYTVSHSHIRNKRTFRPNLQPVRTTID--GENVRVRVCVKCLK 55 >gi|167957091|ref|ZP_02544165.1| hypothetical protein cdiviTM7_00351 [candidate division TM7 single-cell isolate TM7c] Length = 68 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ C+LT K GN VS + +T+R F PNL + T + D QK + +S A+R+++ Sbjct: 1 MASRCDLTGKGKQYGNNVSFSLRRTKRVFKPNLQKKTFVVD--GQKITMTLSTQAIRTLK 58 Query: 61 RQGGL 65 ++G L Sbjct: 59 KKGIL 63 >gi|116625692|ref|YP_827848.1| 50S ribosomal protein L28 [Candidatus Solibacter usitatus Ellin6076] gi|122252115|sp|Q01S07|RL28_SOLUE RecName: Full=50S ribosomal protein L28 gi|116228854|gb|ABJ87563.1| LSU ribosomal protein L28P [Candidatus Solibacter usitatus Ellin6076] Length = 63 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C+L + GN++SHA+N T+RR+ NL + + + + ++R+ +R Sbjct: 1 MAQTCDLCGRGPAFGNRISHAHNVTKRRWNINLQSVRALVNGAGR--RMRVCTSCIR 55 >gi|291454384|ref|ZP_06593774.1| 50S ribosomal protein L28 [Streptomyces albus J1074] gi|291357333|gb|EFE84235.1| 50S ribosomal protein L28 [Streptomyces albus J1074] Length = 61 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPSFGNNISHSHRRTSRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 55 >gi|220904652|ref|YP_002479964.1| 50S ribosomal protein L28 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254801355|sp|B8J0K9|RL28_DESDA RecName: Full=50S ribosomal protein L28 gi|219868951|gb|ACL49286.1| ribosomal protein L28 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 69 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C K GN VSH+N KT+RRF PNL R+ L + LRS Sbjct: 1 MSKECIFCGKKPQVGNLVSHSNIKTKRRFNPNLQRVRHQF-ADGSVRTLTVCTRCLRS 57 >gi|258511311|ref|YP_003184745.1| 50S ribosomal protein L28 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478037|gb|ACV58356.1| ribosomal protein L28 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 63 Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R CE+ + GNK+SH++ T+RR+ PNL + + D ++R+ L+ Sbjct: 1 MARRCEVCGRGPQVGNKISHSHILTKRRWYPNLQSVRAVVD--GSVKRIRVCTRCLK 55 >gi|254411356|ref|ZP_05025133.1| ribosomal protein L28 [Microcoleus chthonoplastes PCC 7420] gi|196181857|gb|EDX76844.1| ribosomal protein L28 [Microcoleus chthonoplastes PCC 7420] Length = 78 Score = 70.8 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + +SH++ +T++ NL + + +LR+S A++++E Sbjct: 1 MSRKCQLTGKKANNAYAISHSHRRTKKLQEANLQWKRVWWQEGNRWVKLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|321478309|gb|EFX89266.1| hypothetical protein DAPPUDRAFT_94742 [Daphnia pulex] Length = 257 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 23 NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARM 81 + + P+L + L S+I+++ ++ ++ LR V++ G D ++ + ++L S Sbjct: 88 RRAAHFWFPSLIKSVLYSEILDKHMEITVTPRTLRLVDQHYGFDSYILETPPQDLKSNLG 147 Query: 82 RTLRSQILKKMSEK 95 L+ +L +++K Sbjct: 148 VKLKRSLLLALAKK 161 >gi|291299621|ref|YP_003510899.1| 50S ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728] gi|290568841|gb|ADD41806.1| ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728] Length = 63 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MSR CE+ K G+ V + KT RR+ PNL + + + ++++ L+ Sbjct: 1 MSRKCEVCGKGPGFGHNVPWSKKKTNRRWNPNLQSVRASTGSGDNLKRVKVCTSCLK 57 >gi|51892497|ref|YP_075188.1| 50S ribosomal protein L28 [Symbiobacterium thermophilum IAM 14863] gi|67461381|sp|Q67PP9|RL28_SYMTH RecName: Full=50S ribosomal protein L28 gi|51856186|dbj|BAD40344.1| 50S ribosomal protein L28 [Symbiobacterium thermophilum IAM 14863] Length = 63 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V G+ VSHA NKT+R + PN+ + + D + ++ + LRS Sbjct: 1 MARRCEVCNKGVSHGHNVSHAENKTKRTWSPNVQTVRAVVD--GRVKRITVCTRCLRS 56 >gi|330906445|ref|XP_003295477.1| hypothetical protein PTT_01224 [Pyrenophora teres f. teres 0-1] gi|311333213|gb|EFQ96431.1| hypothetical protein PTT_01224 [Pyrenophora teres f. teres 0-1] Length = 486 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 10 KTVMSGNKVSHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRF 68 K V GN VS KTRR++ PN+ +L S +++K +L ++K L+ ++R+GGLD + Sbjct: 91 KRVRFGNNVSKKTETKTRRKWTPNVLTKSLYSVALKKKIKLALAKHILKIIDREGGLDEY 150 Query: 69 LSN---SKKENLSARMRTLRSQILKK 91 L ++ + L LR ++++ Sbjct: 151 LLKDNEARIKELGPMGWALRWTLMQR 176 >gi|94987268|ref|YP_595201.1| 50S ribosomal protein L28 [Lawsonia intracellularis PHE/MN1-00] gi|166226584|sp|Q1MQ47|RL28_LAWIP RecName: Full=50S ribosomal protein L28 gi|94731517|emb|CAJ54880.1| ribosomal protein L28 [Lawsonia intracellularis PHE/MN1-00] Length = 69 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K + GN VSH+N KT+R F PNL + + + I +RS Sbjct: 1 MAKQCEICGKKPLVGNYVSHSNIKTKRVFNPNLQHMRNQFPD-GRIKTITICTRCIRS 57 >gi|205355326|ref|ZP_03222097.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346560|gb|EDZ33192.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CG8421] Length = 78 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 15 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 73 Query: 61 R 61 + Sbjct: 74 K 74 >gi|261749205|ref|YP_003256890.1| 50S ribosomal protein L28 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497297|gb|ACX83747.1| 50S ribosomal protein L28 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 75 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCELT K M GN+VSHANNK +RRF NLC+ ++ L+I A++ + Sbjct: 1 MSKVCELTGKRAMIGNRVSHANNKNKRRFNINLCKKRFFLTKEKKWITLKICTSAIKLIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|78044163|ref|YP_360301.1| 50S ribosomal protein L28 [Carboxydothermus hydrogenoformans Z-2901] gi|123576142|sp|Q3AC33|RL28_CARHZ RecName: Full=50S ribosomal protein L28 gi|77996278|gb|ABB15177.1| ribosomal protein L28 [Carboxydothermus hydrogenoformans Z-2901] Length = 62 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VCE+ K V+ G+++SH+N T+R++LPNL R+ + + + ++ + L+S Sbjct: 1 MAKVCEICGKGVVYGHQISHSNIHTKRKWLPNLQRVRAVVNGTRR--RITVCTTCLKS 56 >gi|227875293|ref|ZP_03993435.1| 50S ribosomal protein L28 [Mobiluncus mulieris ATCC 35243] gi|269978180|ref|ZP_06185130.1| ribosomal protein L28 [Mobiluncus mulieris 28-1] gi|306818555|ref|ZP_07452278.1| 50S ribosomal protein L28 [Mobiluncus mulieris ATCC 35239] gi|307700759|ref|ZP_07637784.1| ribosomal protein L28 [Mobiluncus mulieris FB024-16] gi|227844198|gb|EEJ54365.1| 50S ribosomal protein L28 [Mobiluncus mulieris ATCC 35243] gi|269933689|gb|EEZ90273.1| ribosomal protein L28 [Mobiluncus mulieris 28-1] gi|304648728|gb|EFM46030.1| 50S ribosomal protein L28 [Mobiluncus mulieris ATCC 35239] gi|307613754|gb|EFN92998.1| ribosomal protein L28 [Mobiluncus mulieris FB024-16] Length = 65 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC++ K G VSH++ + +RRF PN+ R+ + + L + ++S Sbjct: 1 MAAVCDICGKGPGFGMSVSHSHRRNKRRFNPNIQRVRALVKGTPKH--LNVCTKCIKS 56 >gi|297626614|ref|YP_003688377.1| ribosomal protein L28 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922379|emb|CBL56951.1| Ribosomal protein L28 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 61 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VCE+ K G+ V + KT RR+ PN+ R+ + + + +L + L+ Sbjct: 1 MAAVCEICGKGPGFGHNVPWSKKKTNRRWNPNIQRVHAVVNGTAK--RLNVCTSCLK 55 >gi|258405533|ref|YP_003198275.1| 50S ribosomal protein L28 [Desulfohalobium retbaense DSM 5692] gi|257797760|gb|ACV68697.1| ribosomal protein L28 [Desulfohalobium retbaense DSM 5692] Length = 65 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C K GN VSHANNKT+RRF+PNL R+ Q ++ LRS Sbjct: 1 MSKECYFCGKKPQVGNNVSHANNKTKRRFMPNLQRVRTQL-SSGQVKKVTACTRCLRS 57 >gi|94967196|ref|YP_589244.1| 50S ribosomal protein L28 [Candidatus Koribacter versatilis Ellin345] gi|166226529|sp|Q1IVD0|RL28_ACIBL RecName: Full=50S ribosomal protein L28 gi|94549246|gb|ABF39170.1| LSU ribosomal protein L28P [Candidatus Koribacter versatilis Ellin345] Length = 62 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC++ K GN +SHA+N T+RR+ NL + + ++R+ LRS Sbjct: 1 MAQVCDMCGKGPQFGNNISHAHNVTKRRWNVNLRPVRAKVN--GATKRMRVCTTCLRS 56 >gi|145220200|ref|YP_001130909.1| 50S ribosomal protein L28 [Prosthecochloris vibrioformis DSM 265] gi|189029450|sp|A4SFZ8|RL28_PROVI RecName: Full=50S ribosomal protein L28 gi|145206364|gb|ABP37407.1| LSU ribosomal protein L28P [Chlorobium phaeovibrioides DSM 265] Length = 72 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN R RF PNL + + ++ ++++S A+R + Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRTRFEPNLHTKRIWIEEEKRWAKVKLSAKAMRIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|312076938|ref|XP_003141083.1| hypothetical protein LOAG_05498 [Loa loa] gi|307763750|gb|EFO22984.1| hypothetical protein LOAG_05498 [Loa loa] Length = 611 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 8/89 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLD 66 TKK ++ + V H F PNL + S+++++ ++ +++ R +++ GLD Sbjct: 120 FTKKKILPRHWVPHF-------FFPNLKNVLTYSEVLDKHMKITMTERTCRLIDQHFGLD 172 Query: 67 RFLSNSKKENL-SARMRTLRSQILKKMSE 94 +L + + ++ S L+ +IL +++ Sbjct: 173 LYLLETPEIDIASKLGNKLKREILLVLAK 201 >gi|33237910|gb|AAP99977.1| Ribosomal protein L28 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 82 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCEL+ +G VSH++ +T++ NL + L + ++ +R+S L++++ Sbjct: 5 MSRVCELSGTRANNGMAVSHSHIRTKKLQQANLQKRRLWWEEGKKWLNIRVSTSTLKTIQ 64 Query: 61 RQGGLDRF 68 ++G LD + Sbjct: 65 KKG-LDSY 71 >gi|57242275|ref|ZP_00370214.1| ribosomal protein L28 [Campylobacter upsaliensis RM3195] gi|57016955|gb|EAL53737.1| ribosomal protein L28 [Campylobacter upsaliensis RM3195] Length = 64 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R+C++T K M GN VSHANNKT+RRFLPNL + + + + RI+ LR+++ Sbjct: 1 MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRITLED-GTTRKARIAASTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|119356418|ref|YP_911062.1| 50S ribosomal protein L28 [Chlorobium phaeobacteroides DSM 266] gi|166226561|sp|A1BE11|RL28_CHLPD RecName: Full=50S ribosomal protein L28 gi|119353767|gb|ABL64638.1| LSU ribosomal protein L28P [Chlorobium phaeobacteroides DSM 266] Length = 72 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN R RF PNL + + ++ ++++S A++ + Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHVRTRFEPNLHTKKIWIEEEKRFVKVKLSAKAMKIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|32491152|ref|NP_871406.1| hypothetical protein WGLp403 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340353|sp|Q8D2F1|RL28_WIGBR RecName: Full=50S ribosomal protein L28 gi|25166359|dbj|BAC24549.1| rpmB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 78 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR+C++T K +SGNK SH+ N +R+F PNL D ++ LRISK LR ++ Sbjct: 1 MSRICQITGKKPLSGNKRSHSMNAKKRKFFPNLHNHRFWLDKEKKFINLRISKQGLRLID 60 Query: 61 RQG 63 + G Sbjct: 61 KYG 63 >gi|241729588|ref|XP_002404608.1| 39S ribosomal protein L28, putative [Ixodes scapularis] gi|215505496|gb|EEC14990.1| 39S ribosomal protein L28, putative [Ixodes scapularis] Length = 270 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Query: 3 RVCE---LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + C+ + ++SG + + + F P L R + S+I+++ ++ +++ + + Sbjct: 73 KECQQGIWGGEGIISGYRRRKYG-RYSKYFTPILKRGVVYSEILDKYMRVTLTERTVLLI 131 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 + G D+++ + ++L S LR ++L ++ K Sbjct: 132 NQNFGFDQYILKTPVQDLKSQLALDLRRKMLLALARK 168 >gi|312880184|ref|ZP_07739984.1| LSU ribosomal protein L28P [Aminomonas paucivorans DSM 12260] gi|310783475|gb|EFQ23873.1| LSU ribosomal protein L28P [Aminomonas paucivorans DSM 12260] Length = 64 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSRVC+ + +GN VSH+ TRRR+L NL + + + +L + LRS Sbjct: 1 MSRVCDCCGRGPQTGNSVSHSVRHTRRRWLINLQSVRVDVGC-GETKRLHVCTKCLRS 57 >gi|311898527|dbj|BAJ30935.1| putative ribosomal protein L28 [Kitasatospora setae KM-6054] Length = 61 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ + + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNSISHSHRRTPRRWNPNIQTVRAVIGRTPK--RLNVCTSCIK 55 >gi|290967866|ref|ZP_06559417.1| ribosomal protein L28 [Megasphaera genomosp. type_1 str. 28L] gi|290782106|gb|EFD94683.1| ribosomal protein L28 [Megasphaera genomosp. type_1 str. 28L] Length = 63 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ CE+ K M+G VSH++ KT+R + PN+ R+ + + + ++ + LRS Sbjct: 1 MANYCEICGKGKMAGMNVSHSHLKTKRTWKPNIQRVRAMVE--GEVKRVNVCTRCLRS 56 >gi|304437378|ref|ZP_07397337.1| 50S ribosomal protein L28 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369634|gb|EFM23300.1| 50S ribosomal protein L28 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 63 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K +MSGN VSH++ KT+R++ PN+ R+ + + ++ + LRS Sbjct: 1 MASVCEVCGKGMMSGNNVSHSHVKTKRKWKPNIQRVRALVK--GEVKRVNVCTRCLRS 56 >gi|311742952|ref|ZP_07716760.1| 50S ribosomal protein L28 [Aeromicrobium marinum DSM 15272] gi|311313632|gb|EFQ83541.1| 50S ribosomal protein L28 [Aeromicrobium marinum DSM 15272] Length = 64 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 + VC++ K G+ VSH++ +T+RRF PN+ R+ + + Q ++ + L+ Sbjct: 5 AAVCDVCSKGPGFGHNVSHSHRRTKRRFDPNIQRVRAVVNGTPQ--RVNVCTSCLK 58 >gi|156100187|ref|XP_001615821.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804695|gb|EDL46094.1| hypothetical protein, conserved [Plasmodium vivax] Length = 281 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + PN+ + ++S+I+ ++++ AL +++ GG D ++ + E Sbjct: 60 KVSYSLKKTRIKLKPNVFKKHIVSNILNTIIPNVKVTTSALHAMDDAGGFDNYILRTPPE 119 Query: 76 NL-SARMRTLRSQI 88 L S L+S + Sbjct: 120 ELRSNFGEKLKSVM 133 >gi|157163889|ref|YP_001466762.1| 50S ribosomal protein L28 [Campylobacter concisus 13826] gi|166226555|sp|A7ZDA4|RL28_CAMC1 RecName: Full=50S ribosomal protein L28 gi|112800136|gb|EAT97480.1| ribosomal protein L28 [Campylobacter concisus 13826] Length = 63 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C +T K M GN VSHANNKT+RRFLPNL I + + +++++ LR+++ Sbjct: 1 MSKRCAITGKGPMVGNNVSHANNKTKRRFLPNLRTIRVTLED-GTTRRIKVAASTLRTMK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|300864309|ref|ZP_07109187.1| 50S ribosomal protein L28 [Oscillatoria sp. PCC 6506] gi|300337698|emb|CBN54333.1| 50S ribosomal protein L28 [Oscillatoria sp. PCC 6506] Length = 78 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K +G VSH++ +T + NL + ++ +L +S A+++++ Sbjct: 1 MSRKCQLTGKKANNGMAVSHSHRRTHKLQEANLQWKRIWWPQGKRWVKLHLSTKAIKTIQ 60 Query: 61 RQG 63 +G Sbjct: 61 LKG 63 >gi|154173798|ref|YP_001408511.1| 50S ribosomal protein L28 [Campylobacter curvus 525.92] gi|166226556|sp|A7GZ69|RL28_CAMC5 RecName: Full=50S ribosomal protein L28 gi|112803079|gb|EAU00423.1| ribosomal protein L28 [Campylobacter curvus 525.92] Length = 63 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C +T K M GN VSHANNKT+RRFLPNL I + + +++++ LR+++ Sbjct: 1 MSRRCAITGKGPMVGNNVSHANNKTKRRFLPNLRTIRVTLED-GTTRKIKVAASTLRTMK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|89895425|ref|YP_518912.1| 50S ribosomal protein L28 [Desulfitobacterium hafniense Y51] gi|219669856|ref|YP_002460291.1| 50S ribosomal protein L28 [Desulfitobacterium hafniense DCB-2] gi|122482250|sp|Q24U24|RL28_DESHY RecName: Full=50S ribosomal protein L28 gi|254801356|sp|B8FS67|RL28_DESHD RecName: Full=50S ribosomal protein L28 gi|89334873|dbj|BAE84468.1| 50S ribosomal protein L28 [Desulfitobacterium hafniense Y51] gi|219540116|gb|ACL21855.1| ribosomal protein L28 [Desulfitobacterium hafniense DCB-2] Length = 63 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VC + K V SG +VSH++ +T+R + PNL R+ I + ++ + LRS Sbjct: 1 MANVCAICGKGVASGIQVSHSHIRTKRTWKPNLQRVHAIVN--GTPTRISVCTRCLRS 56 >gi|222099405|ref|YP_002533973.1| 50S ribosomal protein L28 [Thermotoga neapolitana DSM 4359] gi|221571795|gb|ACM22607.1| 50S ribosomal protein L28 [Thermotoga neapolitana DSM 4359] Length = 72 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE+ K SGN VSH+N KT R F PNL ++ ++ ++R+ L+ Sbjct: 3 MAKRCEVCGKAPRSGNNVSHSNKKTGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLK 58 >gi|161407960|ref|NP_875325.2| 50S ribosomal protein L28 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|67461503|sp|Q7VC09|RL28_PROMA RecName: Full=50S ribosomal protein L28 Length = 78 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCEL+ +G VSH++ +T++ NL + L + ++ +R+S L++++ Sbjct: 1 MSRVCELSGTRANNGMAVSHSHIRTKKLQQANLQKRRLWWEEGKKWLNIRVSTSTLKTIQ 60 Query: 61 RQGGLDRF 68 ++G LD + Sbjct: 61 KKG-LDSY 67 >gi|307109659|gb|EFN57896.1| hypothetical protein CHLNCDRAFT_15707 [Chlorella variabilis] Length = 77 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SRVC+LT K +G V+ ++ + ++ NL + ++ +LRIS A++S+E+ Sbjct: 1 SRVCDLTGKRANNGYVVTFSHKRNKKLQQVNLQYKKVYWPEGQRWVKLRISTKAIKSIEK 60 Query: 62 QGGLDRFLSNSKKENLSARMRTL 84 +G + + + L Sbjct: 61 KG------LQTMADEAGIDLWKL 77 >gi|262203092|ref|YP_003274300.1| 50S ribosomal protein L28 [Gordonia bronchialis DSM 43247] gi|262086439|gb|ACY22407.1| ribosomal protein L28 [Gordonia bronchialis DSM 43247] Length = 63 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + +K + + L+ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTNRRWNPNIQSVRVEVAPGNRK-RKNVCTSCLK 56 >gi|313901536|ref|ZP_07834981.1| LSU ribosomal protein L28P [Thermaerobacter subterraneus DSM 13965] gi|313468197|gb|EFR63666.1| LSU ribosomal protein L28P [Thermaerobacter subterraneus DSM 13965] Length = 63 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V GN+VSH+N K+RR + PNL R+ ++ + ++R+ L+S Sbjct: 1 MARRCEICGKGVDYGNQVSHSNRKSRRIWGPNLQRVRAVTPQGVR--RIRVCTTCLKS 56 >gi|289643461|ref|ZP_06475580.1| ribosomal protein L28 [Frankia symbiont of Datisca glomerata] gi|289506713|gb|EFD27693.1| ribosomal protein L28 [Frankia symbiont of Datisca glomerata] Length = 80 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKY--QLRISKCALRS 58 MS C++T + G +VSH++ +TRRR+ PN+ + T ++ L +S +++ Sbjct: 1 MSARCQVTGRKPGFGMRVSHSHRRTRRRWDPNIQKKTYWLPGENRRVTLTLTLSAKGIKT 60 Query: 59 VERQGGLDRFLSNSKKENLSARMRTL 84 V+R+G + L AR + Sbjct: 61 VDRRG------IEAVVRELRARGVKV 80 >gi|325001794|ref|ZP_08122906.1| 50S ribosomal protein L28 [Pseudonocardia sp. P1] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + ++ ++ L+ Sbjct: 1 MAAVCDVCGKGPGFGMSVSHSHRRTNRRWNPNIQTVRAAINGGNRR-RINACTSCLK 56 >gi|303286063|ref|XP_003062321.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455838|gb|EEH53140.1| predicted protein [Micromonas pusilla CCMP1545] Length = 200 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R C LT K +G VS ++ + ++ NL + ++ +LRIS AL+++ + Sbjct: 58 RKCMLTGKKANNGYTVSFSHIRNKKLQGANLQYKRVYWPEQQRYIRLRISTNALKTINKV 117 Query: 63 G 63 G Sbjct: 118 G 118 >gi|169830811|ref|YP_001716793.1| 50S ribosomal protein L28 [Candidatus Desulforudis audaxviator MP104C] gi|226738067|sp|B1I2D5|RL28_DESAP RecName: Full=50S ribosomal protein L28 gi|169637655|gb|ACA59161.1| ribosomal protein L28 [Candidatus Desulforudis audaxviator MP104C] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C+L K V+ G K+SH++ +T+R + PNL R+ + D + ++R+ LRS Sbjct: 1 MAKKCDLCGKGVVVGMKLSHSHIRTKRTWEPNLQRVRALVD--GKPRRIRVCTRCLRS 56 >gi|158335837|ref|YP_001517011.1| 50S ribosomal protein L28 [Acaryochloris marina MBIC11017] gi|189042422|sp|B0C811|RL28_ACAM1 RecName: Full=50S ribosomal protein L28 gi|158306078|gb|ABW27695.1| 50S ribosomal protein L28 [Acaryochloris marina MBIC11017] Length = 78 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 35/63 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M + C+LT K + VSH++ +T + NL + ++ +LR+S A++++E Sbjct: 1 MGKKCQLTGKKANNAFAVSHSHRRTHKLQEANLQWKRVWWPQEKRWVKLRLSTKAIKTLE 60 Query: 61 RQG 63 ++G Sbjct: 61 KKG 63 >gi|8928328|sp|O50656|RL28_SELRU RecName: Full=50S ribosomal protein L28 gi|2897823|dbj|BAA24922.1| hypothetical protein [Selenomonas ruminantium] gi|28804805|dbj|BAC57939.1| ribosomal protein L28 [Selenomonas ruminantium] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K +SGN VSH++ KTRR + PN+ R+ + + + ++ + LRS Sbjct: 1 MASVCEICAKGELSGNNVSHSHLKTRRTWKPNIQRVRAVVE--GEVKRVNVCTRCLRS 56 >gi|302554397|ref|ZP_07306739.1| ribosomal protein L28 [Streptomyces viridochromogenes DSM 40736] gi|302472015|gb|EFL35108.1| ribosomal protein L28 [Streptomyces viridochromogenes DSM 40736] Length = 61 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRTVVGGTPK--RVNACTSCIK 55 >gi|118468800|ref|YP_886741.1| 50S ribosomal protein L28 [Mycobacterium smegmatis str. MC2 155] gi|118170087|gb|ABK70983.1| ribosomal protein L28 [Mycobacterium smegmatis str. MC2 155] Length = 64 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ K ++ ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTSRRWNPNIQPVRAVTRPGGNKQRINACTSCIK 57 >gi|319955905|ref|YP_004167168.1| LSU ribosomal protein l28p [Nitratifractor salsuginis DSM 16511] gi|319418309|gb|ADV45419.1| LSU ribosomal protein L28P [Nitratifractor salsuginis DSM 16511] Length = 70 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C++T K + G VSHA+NKT++R LPNL + + + +K +++++ LR++ Sbjct: 1 MARRCQITGKGPLVGYNVSHAHNKTKKRQLPNLRTVRITLEDGTRK-KIKVAASTLRTMR 59 Query: 61 RQ 62 ++ Sbjct: 60 KK 61 >gi|148925829|ref|ZP_01809516.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CG8486] gi|145844815|gb|EDK21919.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni CG8486] gi|307747382|gb|ADN90652.1| 50S ribosomal protein L28 [Campylobacter jejuni subsp. jejuni M1] Length = 78 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+RVC++T K M GN VSHANNKT+RRFLPNL + + + ++RI+ LR+++ Sbjct: 15 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 73 Query: 61 R 61 + Sbjct: 74 K 74 >gi|182435709|ref|YP_001823428.1| 50S ribosomal protein L28 [Streptomyces griseus subsp. griseus NBRC 13350] gi|282861346|ref|ZP_06270411.1| ribosomal protein L28 [Streptomyces sp. ACTE] gi|326776334|ref|ZP_08235599.1| 50S ribosomal protein L28 [Streptomyces cf. griseus XylebKG-1] gi|178464225|dbj|BAG18745.1| putative 50S ribosomal protein L28 [Streptomyces griseus subsp. griseus NBRC 13350] gi|282564004|gb|EFB69541.1| ribosomal protein L28 [Streptomyces sp. ACTE] gi|320008322|gb|ADW03172.1| ribosomal protein L28 [Streptomyces flavogriseus ATCC 33331] gi|326656667|gb|EGE41513.1| 50S ribosomal protein L28 [Streptomyces cf. griseus XylebKG-1] Length = 61 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPSFGNSISHSHRRTSRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 55 >gi|77918893|ref|YP_356708.1| 50S ribosomal protein L28 [Pelobacter carbinolicus DSM 2380] gi|123574379|sp|Q3A519|RL28_PELCD RecName: Full=50S ribosomal protein L28 gi|77544976|gb|ABA88538.1| LSU ribosomal protein L28P [Pelobacter carbinolicus DSM 2380] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSRVC++ K +GN VSHA+NKTR+ + PNL ++ + + +++ LRS Sbjct: 1 MSRVCDICGKKPTTGNNVSHAHNKTRKVWYPNLQKVRALHK--GKVQAIKVCTRCLRS 56 >gi|118580811|ref|YP_902061.1| 50S ribosomal protein L28 [Pelobacter propionicus DSM 2379] gi|166226596|sp|A1ARN3|RL28_PELPD RecName: Full=50S ribosomal protein L28 gi|118503521|gb|ABL00004.1| LSU ribosomal protein L28P [Pelobacter propionicus DSM 2379] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR+C + K GN VSHANNKTR + PNL +I + +++ +RS Sbjct: 1 MSRICAICGKGPSFGNNVSHANNKTRTVWYPNLQKIKAV--RNGSVKTIKVCTRCIRS 56 >gi|302823364|ref|XP_002993335.1| hypothetical protein SELMODRAFT_136927 [Selaginella moellendorffii] gi|300138844|gb|EFJ05597.1| hypothetical protein SELMODRAFT_136927 [Selaginella moellendorffii] Length = 77 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 RVCELT K + K+S+++ +TR++ PNL L + ++ +LRI AL++++++ Sbjct: 1 RVCELTGKKYNNARKISYSHIRTRKKQQPNLQYKRLWWEAGQRFVRLRICTQALKTIDKK 60 Query: 63 G 63 G Sbjct: 61 G 61 >gi|325290437|ref|YP_004266618.1| LSU ribosomal protein L28P [Syntrophobotulus glycolicus DSM 8271] gi|324965838|gb|ADY56617.1| LSU ribosomal protein L28P [Syntrophobotulus glycolicus DSM 8271] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS VC + K V +G KVSH++ +T+R + PNL R+ + + LR+ LRS Sbjct: 1 MSNVCAICGKGVSTGMKVSHSHIRTKRTWKPNLQRVRAVVNGTPTH--LRVCTRCLRS 56 >gi|256832899|ref|YP_003161626.1| 50S ribosomal protein L28 [Jonesia denitrificans DSM 20603] gi|256686430|gb|ACV09323.1| ribosomal protein L28 [Jonesia denitrificans DSM 20603] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ +C++ K G+ +SH++ +T+RR+ PN+ R+ I + +L + L+ Sbjct: 1 MAAICDVCAKGPSFGHSISHSHVRTKRRWNPNIQRVRAIVN--GAPKRLNVCTSCLK 55 >gi|134102560|ref|YP_001108221.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] gi|291007069|ref|ZP_06565042.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] gi|133915183|emb|CAM05296.1| 50S ribosomal protein L28 [Saccharopolyspora erythraea NRRL 2338] Length = 63 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K GN VSH++ KTRRR+ PN+ + + Q+ ++ + L+ Sbjct: 1 MAAVCDVCSKGPGFGNSVSHSHRKTRRRWNPNIQTVHAKI-GLSQRKRMNVCTSCLK 56 >gi|319779276|ref|YP_004130189.1| LSU ribosomal protein L28p [Taylorella equigenitalis MCE9] gi|317109300|gb|ADU92046.1| LSU ribosomal protein L28p [Taylorella equigenitalis MCE9] Length = 61 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLS 78 SHA+NKT+RRFLPNL + + +LRIS ALR+++++G +D L++ +K S Sbjct: 2 SHAHNKTKRRFLPNLQTHRFWVESENRWVRLRISSAALRTIDKKG-IDAVLADMRKNGQS 60 >gi|51598608|ref|YP_072796.1| 50S ribosomal protein L28 [Borrelia garinii PBi] gi|67461376|sp|Q661R7|RL28_BORGA RecName: Full=50S ribosomal protein L28 gi|51573179|gb|AAU07204.1| ribosomal protein L28 [Borrelia garinii PBi] Length = 92 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPELGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 NIKVSANALRSISKVG-LDAFLKKN 84 >gi|78779282|ref|YP_397394.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9312] gi|123554241|sp|Q31AY7|RL28_PROM9 RecName: Full=50S ribosomal protein L28 gi|78712781|gb|ABB49958.1| LSU ribosomal protein L28P [Prochlorococcus marinus str. MIT 9312] Length = 78 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L + ++ ++IS AL+SV+ Sbjct: 1 MSRVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSVQ 60 Query: 61 RQGGLDRFLSNS 72 + G LD+F ++ Sbjct: 61 KVG-LDKFAKSN 71 >gi|294815342|ref|ZP_06773985.1| LSU ribosomal protein L28P [Streptomyces clavuligerus ATCC 27064] gi|294327941|gb|EFG09584.1| LSU ribosomal protein L28P [Streptomyces clavuligerus ATCC 27064] Length = 65 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 + C++ K GN +SH++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 6 AANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 59 >gi|257054975|ref|YP_003132807.1| 50S ribosomal protein L28P [Saccharomonospora viridis DSM 43017] gi|256584847|gb|ACU95980.1| LSU ribosomal protein L28P [Saccharomonospora viridis DSM 43017] Length = 66 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 + VC++ K G VSH++ +T RR+ PN+ + + QK +L + ++ Sbjct: 5 AAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHARV-GLSQKKRLNVCTSCIK 59 >gi|212712580|ref|ZP_03320708.1| hypothetical protein PROVALCAL_03675 [Providencia alcalifaciens DSM 30120] gi|282600470|ref|ZP_05974416.2| ribosomal protein L28 [Providencia rustigianii DSM 4541] gi|212684796|gb|EEB44324.1| hypothetical protein PROVALCAL_03675 [Providencia alcalifaciens DSM 30120] gi|282565171|gb|EFB70706.1| ribosomal protein L28 [Providencia rustigianii DSM 4541] Length = 66 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN SHA N T+RRFLPNL + ++ LR+S +R ++++G +D L+ Sbjct: 1 MSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDAVLAEL 59 Query: 73 KKE 75 + Sbjct: 60 RTR 62 >gi|290957129|ref|YP_003488311.1| 50S ribosomal protein L28 [Streptomyces scabiei 87.22] gi|260646655|emb|CBG69752.1| putative 50S ribosomal protein L28 [Streptomyces scabiei 87.22] Length = 61 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MAANCDVCGKGPSFGNNISHSHRRTSRRWNPNIQRVRTVVGGTPK--RVNACTSCIK 55 >gi|283782815|ref|YP_003373569.1| ribosomal protein L28 [Gardnerella vaginalis 409-05] gi|283441728|gb|ADB14194.1| ribosomal protein L28 [Gardnerella vaginalis 409-05] Length = 64 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ + +R F PNL + D + +LR+ ++ Sbjct: 1 MAARCAVCGKGPQTGFTVSHSHIRNKRTFRPNLQPVRTTID--GENVRLRVCVKCIK 55 >gi|84498314|ref|ZP_00997111.1| 50S ribosomal protein L28 [Janibacter sp. HTCC2649] gi|84381814|gb|EAP97697.1| 50S ribosomal protein L28 [Janibacter sp. HTCC2649] Length = 64 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIME-QKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ R+ + +L + L+ Sbjct: 1 MAANCDVCGKGPGFGHSISHSHRRTKRRWNPNIQRVKALVGDKGVTPKRLNVCTSCLK 58 >gi|256379972|ref|YP_003103632.1| ribosomal protein L28 [Actinosynnema mirum DSM 43827] gi|255924275|gb|ACU39786.1| ribosomal protein L28 [Actinosynnema mirum DSM 43827] Length = 63 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +++ +L + L+ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVRAKVSSSQRQ-RLNVCTSCLK 56 >gi|221059319|ref|XP_002260305.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] gi|193810378|emb|CAQ41572.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] Length = 281 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + PN+ + ++S+I+ ++++ AL +++ GG D ++ + E Sbjct: 60 KVSYSLKKTRIKLKPNVFKKHIVSNILNTIIPNVKVTTSALHAMDDAGGFDNYILRTPPE 119 Query: 76 NL-SARMRTLRSQI 88 L S L+S + Sbjct: 120 ELRSNYGEKLKSVM 133 >gi|297183384|gb|ADI19518.1| hypothetical protein [uncultured Chloroflexi bacterium HF0770_09E03] Length = 63 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVCE+ K ++GN VSHA+NK+RRR+ PNL R+ D ++R+ LRS Sbjct: 1 MARVCEMCGKKPVAGNSVSHAHNKSRRRWNPNLQRVKANID--GSIKRVRVCTKCLRS 56 >gi|291166054|gb|EFE28100.1| 50S ribosomal protein L28 [Filifactor alocis ATCC 35896] Length = 62 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC++ K MSGN VSH+N +R + PNL + + + + ++ LRS Sbjct: 1 MARVCDVCGKGKMSGNAVSHSNRHNKRTWAPNLRTVHAVVNGTPKTI--KVCTRCLRS 56 >gi|32307506|gb|AAP79158.1| ribosomal protein rpL28 [Bigelowiella natans] Length = 241 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 45/93 (48%), Gaps = 10/93 (10%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R C LT K+ + K ++ + +R PN+ + + ++ ++++S AL+S++++ Sbjct: 65 RRCGLTGKSGTTAYKYCFSHKRATKRQHPNIQQKYVFWPEGQRMVKIKLSTSALKSIDKK 124 Query: 63 G--------GLDRFLSNSKKENLSARMRTLRSQ 87 G G+D L+ +++ + + + Sbjct: 125 GLQVMAKEAGID--LNKLPFKDMRPERQEYKEK 155 >gi|219685441|ref|ZP_03540259.1| ribosomal protein L28 [Borrelia garinii Far04] gi|219672997|gb|EED30018.1| ribosomal protein L28 [Borrelia garinii Far04] Length = 92 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 ++++S ALRS+ + G LD FL + Sbjct: 61 KIKVSANALRSISKIG-LDAFLKKN 84 >gi|312140468|ref|YP_004007804.1| 50S ribosomal protein l28 rpmb [Rhodococcus equi 103S] gi|325675913|ref|ZP_08155597.1| 50S ribosomal protein L28 [Rhodococcus equi ATCC 33707] gi|311889807|emb|CBH49124.1| 50S ribosomal protein L28 RpmB [Rhodococcus equi 103S] gi|325553884|gb|EGD23562.1| 50S ribosomal protein L28 [Rhodococcus equi ATCC 33707] Length = 63 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + +L + L+ Sbjct: 1 MAAVCDVCAKGPGFGKSVSHSHRRTNRRWNPNIQPVRAQV-APGNTKKLNVCTSCLK 56 >gi|269127645|ref|YP_003301015.1| 50S ribosomal protein L28 [Thermomonospora curvata DSM 43183] gi|268312603|gb|ACY98977.1| ribosomal protein L28 [Thermomonospora curvata DSM 43183] Length = 64 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G +VSH++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MASVCDVCGKGPGFGMRVSHSHRRTSRRWNPNIQRVRAVVN--GATKRINACTSCIK 55 >gi|297242907|ref|ZP_06926845.1| ribosomal protein L28 [Gardnerella vaginalis AMD] gi|308235870|ref|ZP_07666607.1| 50S ribosomal protein L28 [Gardnerella vaginalis ATCC 14018] gi|311115034|ref|YP_003986255.1| 50S ribosomal protein L28 [Gardnerella vaginalis ATCC 14019] gi|296889118|gb|EFH27852.1| ribosomal protein L28 [Gardnerella vaginalis AMD] gi|310946528|gb|ADP39232.1| 50S ribosomal protein L28 [Gardnerella vaginalis ATCC 14019] Length = 64 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ + +R F PNL + D + +LR+ ++ Sbjct: 1 MAARCAVCGKGPQTGFSVSHSHIRNKRTFRPNLQPVRTTID--GENVRLRVCVKCIK 55 >gi|119025221|ref|YP_909066.1| 50S ribosomal protein L28 [Bifidobacterium adolescentis ATCC 15703] gi|154486602|ref|ZP_02028009.1| hypothetical protein BIFADO_00419 [Bifidobacterium adolescentis L2-32] gi|166226546|sp|A0ZZV1|RL28_BIFAA RecName: Full=50S ribosomal protein L28 gi|118764805|dbj|BAF38984.1| 50S ribosomal protein L28 [Bifidobacterium adolescentis ATCC 15703] gi|154084465|gb|EDN83510.1| hypothetical protein BIFADO_00419 [Bifidobacterium adolescentis L2-32] Length = 64 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ + +R F PNL + D + ++R+ ++ Sbjct: 1 MAARCAVCGKGPQTGFTVSHSHIRNKRTFRPNLQPVRTTID--GENVRVRVCVKCIK 55 >gi|239991051|ref|ZP_04711715.1| 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 11379] gi|291448052|ref|ZP_06587442.1| 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 15998] gi|291350999|gb|EFE77903.1| 50S ribosomal protein L28 [Streptomyces roseosporus NRRL 15998] Length = 61 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN VS ++ +T RR+ PN+ R+ + + +L + ++ Sbjct: 1 MAANCDVCGKGPSFGNSVSFSHRRTSRRWNPNIQRVRAVVGRTPK--RLNVCTSCIK 55 >gi|163845857|ref|YP_001633901.1| 50S ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl] gi|222523569|ref|YP_002568039.1| 50S ribosomal protein L28 [Chloroflexus sp. Y-400-fl] gi|163667146|gb|ABY33512.1| ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl] gi|222447448|gb|ACM51714.1| ribosomal protein L28 [Chloroflexus sp. Y-400-fl] Length = 61 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ CEL K G+ VS + +T R + PN+ + TL Q Q+RI +R++ Sbjct: 1 MA-TCELCGKKPSFGHNVSFSKRRTNRIWRPNIQKTTLTVPG-GQSVQVRICTRCMRTLA 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|197119577|ref|YP_002140004.1| 50S ribosomal protein L28 [Geobacter bemidjiensis Bem] gi|253699684|ref|YP_003020873.1| 50S ribosomal protein L28 [Geobacter sp. M21] gi|322420741|ref|YP_004199964.1| 50S ribosomal protein L28 [Geobacter sp. M18] gi|226694924|sp|B5E9N4|RL28_GEOBB RecName: Full=50S ribosomal protein L28 gi|259646739|sp|C6E2G9|RL28_GEOSM RecName: Full=50S ribosomal protein L28 gi|197088937|gb|ACH40208.1| ribosomal protein L28 [Geobacter bemidjiensis Bem] gi|251774534|gb|ACT17115.1| ribosomal protein L28 [Geobacter sp. M21] gi|320127128|gb|ADW14688.1| ribosomal protein L28 [Geobacter sp. M18] Length = 63 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR+CE+ K GN VSHANNKT + + PNL +I + + + ++ +RS Sbjct: 1 MSRICEICGKGPSFGNNVSHANNKTSKIWRPNLQKIKAVKNGTVRSI--KVCTRCIRS 56 >gi|255075129|ref|XP_002501239.1| predicted protein [Micromonas sp. RCC299] gi|226516503|gb|ACO62497.1| predicted protein [Micromonas sp. RCC299] Length = 208 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R C LT K +G VS ++ + ++ NL + ++ +LRIS A++S+ + Sbjct: 66 RKCMLTGKKANNGWTVSFSHIRNKKLQGVNLQYKRVYWPEKQRYVRLRISTSAMKSINKI 125 Query: 63 G 63 G Sbjct: 126 G 126 >gi|269792516|ref|YP_003317420.1| 50S ribosomal protein L28 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100151|gb|ACZ19138.1| ribosomal protein L28 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 64 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSRVC+ + +GN VSH+N TRRR+L NL + + + +L++ LRS Sbjct: 1 MSRVCDCCGRGPQTGNAVSHSNRHTRRRWLINLRSVRVDLGC-GETRKLKVCTKCLRS 57 >gi|113477546|ref|YP_723607.1| 50S ribosomal protein L28 [Trichodesmium erythraeum IMS101] gi|122964496|sp|Q10X90|RL28_TRIEI RecName: Full=50S ribosomal protein L28 gi|110168594|gb|ABG53134.1| LSU ribosomal protein L28P [Trichodesmium erythraeum IMS101] Length = 78 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K +G VSH++ +T + NL + ++ +L++S A+++++ Sbjct: 1 MSRKCQLTGKKANNGYSVSHSHIRTHKLQHANLQWKKVWWPQGKKWVKLKLSTKAIKTLQ 60 Query: 61 RQG 63 +G Sbjct: 61 SKG 63 >gi|227883805|ref|ZP_04001610.1| ribosomal protein L28 [Escherichia coli 83972] gi|300815124|ref|ZP_07095349.1| ribosomal protein L28 [Escherichia coli MS 107-1] gi|300822407|ref|ZP_07102547.1| ribosomal protein L28 [Escherichia coli MS 119-7] gi|300898571|ref|ZP_07116902.1| ribosomal protein L28 [Escherichia coli MS 198-1] gi|300907678|ref|ZP_07125306.1| ribosomal protein L28 [Escherichia coli MS 84-1] gi|300919796|ref|ZP_07136271.1| ribosomal protein L28 [Escherichia coli MS 115-1] gi|300923421|ref|ZP_07139462.1| ribosomal protein L28 [Escherichia coli MS 182-1] gi|300927933|ref|ZP_07143492.1| ribosomal protein L28 [Escherichia coli MS 187-1] gi|300948029|ref|ZP_07162170.1| ribosomal protein L28 [Escherichia coli MS 116-1] gi|300954469|ref|ZP_07166919.1| ribosomal protein L28 [Escherichia coli MS 175-1] gi|300983483|ref|ZP_07176630.1| ribosomal protein L28 [Escherichia coli MS 200-1] gi|300984963|ref|ZP_07177215.1| ribosomal protein L28 [Escherichia coli MS 45-1] gi|301018966|ref|ZP_07183189.1| ribosomal protein L28 [Escherichia coli MS 69-1] gi|301028396|ref|ZP_07191642.1| ribosomal protein L28 [Escherichia coli MS 196-1] gi|301047426|ref|ZP_07194506.1| ribosomal protein L28 [Escherichia coli MS 185-1] gi|301303870|ref|ZP_07209989.1| ribosomal protein L28 [Escherichia coli MS 124-1] gi|301325319|ref|ZP_07218826.1| ribosomal protein L28 [Escherichia coli MS 78-1] gi|301644303|ref|ZP_07244305.1| ribosomal protein L28 [Escherichia coli MS 146-1] gi|309784386|ref|ZP_07679025.1| ribosomal protein L28 [Shigella dysenteriae 1617] gi|309797622|ref|ZP_07692010.1| ribosomal protein L28 [Escherichia coli MS 145-7] gi|312968022|ref|ZP_07782233.1| ribosomal protein L28 [Escherichia coli 2362-75] gi|312972078|ref|ZP_07786252.1| ribosomal protein L28 [Escherichia coli 1827-70] gi|329996934|ref|ZP_08302631.1| ribosomal protein L28 [Klebsiella sp. MS 92-3] gi|227839083|gb|EEJ49549.1| ribosomal protein L28 [Escherichia coli 83972] gi|299878507|gb|EFI86718.1| ribosomal protein L28 [Escherichia coli MS 196-1] gi|300300700|gb|EFJ57085.1| ribosomal protein L28 [Escherichia coli MS 185-1] gi|300306947|gb|EFJ61467.1| ribosomal protein L28 [Escherichia coli MS 200-1] gi|300318548|gb|EFJ68332.1| ribosomal protein L28 [Escherichia coli MS 175-1] gi|300357757|gb|EFJ73627.1| ribosomal protein L28 [Escherichia coli MS 198-1] gi|300399460|gb|EFJ82998.1| ribosomal protein L28 [Escherichia coli MS 69-1] gi|300400614|gb|EFJ84152.1| ribosomal protein L28 [Escherichia coli MS 84-1] gi|300408243|gb|EFJ91781.1| ribosomal protein L28 [Escherichia coli MS 45-1] gi|300413149|gb|EFJ96459.1| ribosomal protein L28 [Escherichia coli MS 115-1] gi|300420331|gb|EFK03642.1| ribosomal protein L28 [Escherichia coli MS 182-1] gi|300452424|gb|EFK16044.1| ribosomal protein L28 [Escherichia coli MS 116-1] gi|300464025|gb|EFK27518.1| ribosomal protein L28 [Escherichia coli MS 187-1] gi|300525054|gb|EFK46123.1| ribosomal protein L28 [Escherichia coli MS 119-7] gi|300532016|gb|EFK53078.1| ribosomal protein L28 [Escherichia coli MS 107-1] gi|300840833|gb|EFK68593.1| ribosomal protein L28 [Escherichia coli MS 124-1] gi|300847846|gb|EFK75606.1| ribosomal protein L28 [Escherichia coli MS 78-1] gi|301077341|gb|EFK92147.1| ribosomal protein L28 [Escherichia coli MS 146-1] gi|308118809|gb|EFO56071.1| ribosomal protein L28 [Escherichia coli MS 145-7] gi|308927893|gb|EFP73361.1| ribosomal protein L28 [Shigella dysenteriae 1617] gi|310334455|gb|EFQ00660.1| ribosomal protein L28 [Escherichia coli 1827-70] gi|312287281|gb|EFR15190.1| ribosomal protein L28 [Escherichia coli 2362-75] gi|315254023|gb|EFU33991.1| ribosomal protein L28 [Escherichia coli MS 85-1] gi|315285376|gb|EFU44821.1| ribosomal protein L28 [Escherichia coli MS 110-3] gi|315292974|gb|EFU52326.1| ribosomal protein L28 [Escherichia coli MS 153-1] gi|315297032|gb|EFU56312.1| ribosomal protein L28 [Escherichia coli MS 16-3] gi|320176304|gb|EFW51364.1| LSU ribosomal protein L28p [Shigella dysenteriae CDC 74-1112] gi|320179973|gb|EFW54915.1| LSU ribosomal protein L28p [Shigella boydii ATCC 9905] gi|320191312|gb|EFW65962.1| LSU ribosomal protein L28p [Escherichia coli O157:H7 str. EC1212] gi|320193856|gb|EFW68489.1| LSU ribosomal protein L28p [Escherichia coli WV_060327] gi|320201338|gb|EFW75919.1| LSU ribosomal protein L28p [Escherichia coli EC4100B] gi|320639544|gb|EFX09152.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 str. G5101] gi|323155288|gb|EFZ41471.1| ribosomal protein L28 [Escherichia coli EPECa14] gi|323160755|gb|EFZ46691.1| ribosomal protein L28 [Escherichia coli E128010] gi|323166880|gb|EFZ52619.1| ribosomal protein L28 [Shigella sonnei 53G] gi|323179393|gb|EFZ64960.1| ribosomal protein L28 [Escherichia coli 1180] gi|323182665|gb|EFZ68068.1| ribosomal protein L28 [Escherichia coli 1357] gi|323189455|gb|EFZ74736.1| ribosomal protein L28 [Escherichia coli RN587/1] gi|324008142|gb|EGB77361.1| ribosomal protein L28 [Escherichia coli MS 57-2] gi|324012729|gb|EGB81948.1| ribosomal protein L28 [Escherichia coli MS 60-1] gi|324019746|gb|EGB88965.1| ribosomal protein L28 [Escherichia coli MS 117-3] gi|325499443|gb|EGC97302.1| 50S ribosomal protein L28 [Escherichia fergusonii ECD227] gi|326337364|gb|EGD61199.1| LSU ribosomal protein L28p [Escherichia coli O157:H7 str. 1044] gi|326339889|gb|EGD63696.1| LSU ribosomal protein L28p [Escherichia coli O157:H7 str. 1125] gi|327250763|gb|EGE62465.1| ribosomal protein L28 [Escherichia coli STEC_7v] gi|328539224|gb|EGF65253.1| ribosomal protein L28 [Klebsiella sp. MS 92-3] gi|330909699|gb|EGH38213.1| LSU ribosomal protein L28p [Escherichia coli AA86] gi|332084817|gb|EGI90000.1| ribosomal protein L28 [Shigella boydii 5216-82] gi|332345605|gb|AEE58939.1| ribosomal protein RpmB [Escherichia coli UMNK88] gi|332751259|gb|EGJ81662.1| ribosomal protein L28 [Shigella flexneri 2747-71] gi|332764161|gb|EGJ94398.1| ribosomal protein L28 [Shigella flexneri 2930-71] gi|332996138|gb|EGK15765.1| ribosomal protein L28 [Shigella flexneri VA-6] gi|332997030|gb|EGK16646.1| ribosomal protein L28 [Shigella flexneri K-218] gi|332997784|gb|EGK17395.1| ribosomal protein L28 [Shigella flexneri K-272] gi|333012844|gb|EGK32221.1| ribosomal protein L28 [Shigella flexneri K-304] gi|333013318|gb|EGK32690.1| ribosomal protein L28 [Shigella flexneri K-227] Length = 66 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G +D L+ Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLAEL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|216264106|ref|ZP_03436100.1| ribosomal protein L28 [Borrelia afzelii ACA-1] gi|219684562|ref|ZP_03539505.1| ribosomal protein L28 [Borrelia garinii PBr] gi|215980150|gb|EEC20972.1| ribosomal protein L28 [Borrelia afzelii ACA-1] gi|219671924|gb|EED28978.1| ribosomal protein L28 [Borrelia garinii PBr] Length = 92 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 NIKVSANALRSISKIG-LDAFLKKN 84 >gi|218780246|ref|YP_002431564.1| 50S ribosomal protein L28 [Desulfatibacillum alkenivorans AK-01] gi|226738066|sp|B8FB10|RL28_DESAA RecName: Full=50S ribosomal protein L28 gi|218761630|gb|ACL04096.1| ribosomal protein L28 [Desulfatibacillum alkenivorans AK-01] Length = 63 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR+CE+ K M GN VSHA+N +RRF PNL ++ Q ++ + ++S Sbjct: 1 MSRMCEICGKKPMVGNNVSHAHNVNKRRFNPNLQKVR-SLQENGQVKKITVCTNCIKS 57 >gi|29831185|ref|NP_825819.1| 50S ribosomal protein L28 [Streptomyces avermitilis MA-4680] gi|29608299|dbj|BAC72354.1| putative ribosomal protein L28 [Streptomyces avermitilis MA-4680] Length = 73 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%) Query: 6 ELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 LT GN++SH++ +T RRF PN+ + +LR+S +++V+ G Sbjct: 1 MLTGARPGFGNRISHSHRRTSRRFDPNIQSKRYWLASEGRHVRLRLSAKGIKTVDTLG 58 >gi|123968492|ref|YP_001009350.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. AS9601] gi|166226602|sp|A2BR32|RL28_PROMS RecName: Full=50S ribosomal protein L28 gi|123198602|gb|ABM70243.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. AS9601] Length = 78 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR CELT +G VSH++ +T++ NL + L + ++ ++IS AL+S++ Sbjct: 1 MSRACELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQ 60 Query: 61 RQGGLDRFLSNS 72 + G LD+F ++ Sbjct: 61 KVG-LDKFAKSN 71 >gi|258514449|ref|YP_003190671.1| 50S ribosomal protein L28 [Desulfotomaculum acetoxidans DSM 771] gi|257778154|gb|ACV62048.1| ribosomal protein L28 [Desulfotomaculum acetoxidans DSM 771] Length = 63 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K V++G KVSH++ +T+R + PNL R+ I + ++ + LRS Sbjct: 1 MARKCDICGKGVVTGMKVSHSHIRTKRTWAPNLQRVKAIVN--GSPKRIMVCTRCLRS 56 >gi|225552377|ref|ZP_03773317.1| ribosomal protein L28 [Borrelia sp. SV1] gi|225371375|gb|EEH00805.1| ribosomal protein L28 [Borrelia sp. SV1] Length = 92 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR CE+T K M GN V H KT+R F NL + + Sbjct: 1 MSRKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSV 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 SIKVSANALRSISKIG-LDAFLKKN 84 >gi|78187460|ref|YP_375503.1| 50S ribosomal protein L28 [Chlorobium luteolum DSM 273] gi|123582745|sp|Q3B2H1|RL28_PELLD RecName: Full=50S ribosomal protein L28 gi|78167362|gb|ABB24460.1| LSU ribosomal protein L28P [Chlorobium luteolum DSM 273] Length = 72 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC LT K GN VSHANN R RF PNL + D ++ ++++S A++ + Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRTRFEPNLHTKRIWIDEEKRWAKVKLSAKAMKIIA 60 Query: 61 RQG 63 + G Sbjct: 61 KTG 63 >gi|54026167|ref|YP_120409.1| 50S ribosomal protein L28 [Nocardia farcinica IFM 10152] gi|67461562|sp|Q5YRZ6|RL281_NOCFA RecName: Full=50S ribosomal protein L28 1 gi|54017675|dbj|BAD59045.1| putative ribosomal protein L28 [Nocardia farcinica IFM 10152] Length = 63 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ + L+ Sbjct: 1 MAAVCDVCAKGPGFGKSVSHSHRRTNRRWNPNIQTVRAQV-APGNTRRMNVCTSCLK 56 >gi|21223920|ref|NP_629699.1| 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)] gi|256784981|ref|ZP_05523412.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] gi|289768873|ref|ZP_06528251.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] gi|7674178|sp|Q9ZBR5|RL28A_STRCO RecName: Full=50S ribosomal protein L28-1 gi|4007723|emb|CAA22407.1| putative 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)] gi|289699072|gb|EFD66501.1| 50S ribosomal protein L28 [Streptomyces lividans TK24] Length = 61 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRTVVSGTPK--RVNACTSCIK 55 >gi|270006114|gb|EFA02562.1| hypothetical protein TcasGA2_TC008271 [Tribolium castaneum] Length = 258 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 6 ELTKKTVMSGNKVS-HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGG 64 + ++ G ++ + ++P+L R + S+++ + + +++ + + G Sbjct: 83 MWGGEGIVQGFQIRDWRRRRVPHFWMPHLKRSVVYSEVLNKYISVVVTERTISLINSNYG 142 Query: 65 LDRFLSNSKKENLSARM-RTLRSQILKKMSE 94 D +L + +L A + TL+ +IL+++ + Sbjct: 143 FDHYLLKTPACDLKALLPLTLKRKILQELEK 173 >gi|73959217|ref|XP_865461.1| PREDICTED: similar to mitochondrial ribosomal protein L28 isoform 2 [Canis familiaris] Length = 268 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 43/104 (41%), Gaps = 15/104 (14%) Query: 7 LTKKTVMSGNKV--SHAN-NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G + H + ++ + P L + L S+I++ K+ + ++ L ++ Sbjct: 81 WGGEGWVVGYRYVGDHQLSKRVKKVWKPQLLQRELYSEILDTKFAVTVTARTLDLIDAAY 140 Query: 64 GLDRFLSNS-----------KKENL-SARMRTLRSQILKKMSEK 95 G D ++ + E+L S L+ +L +++ + Sbjct: 141 GFDFYILKASRGLCGRRAGSPGEDLCSKFGMDLKRGMLLRLARQ 184 >gi|317051922|ref|YP_004113038.1| 50S ribosomal protein L28 [Desulfurispirillum indicum S5] gi|316947006|gb|ADU66482.1| ribosomal protein L28 [Desulfurispirillum indicum S5] Length = 61 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+ K N VSHANNKT++R LPNL L + + + +++I +R++ Sbjct: 1 MARRCEICGKQPQVNNNVSHANNKTKKRSLPNLKSQELTVNGLTK--RVKICTSCIRTLN 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|331698534|ref|YP_004334773.1| 50S ribosomal protein L28 [Pseudonocardia dioxanivorans CB1190] gi|326953223|gb|AEA26920.1| 50S ribosomal protein L28 [Pseudonocardia dioxanivorans CB1190] Length = 63 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + D K + + L+ Sbjct: 1 MAAVCDVCGKGPGFGMSVSHSHRRTHRRWNPNIQTVRTR-DAGNNKRRQNVCTSCLK 56 >gi|322797333|gb|EFZ19445.1| hypothetical protein SINV_00972 [Solenopsis invicta] Length = 280 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 16/95 (16%) Query: 10 KTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 K + +V H ++P L + + S++++ ++ +++ ALR + G D +L Sbjct: 92 KKGIFKRRVPHF-------WIPTLKKSVVYSEVLDTYMRVIVTERALRLIHENYGFDHYL 144 Query: 70 SN--------SKKENL-SARMRTLRSQILKKMSEK 95 + +L S L+ QIL +++K Sbjct: 145 LKLLTDHHLQTPACDLRSLLALRLKRQILIALADK 179 >gi|300939236|ref|ZP_07153916.1| ribosomal protein L28 [Escherichia coli MS 21-1] gi|300455878|gb|EFK19371.1| ribosomal protein L28 [Escherichia coli MS 21-1] Length = 66 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G +D L Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLVEL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|172035053|ref|YP_001801554.1| 50S ribosomal protein L28 [Cyanothece sp. ATCC 51142] gi|171696507|gb|ACB49488.1| 50S ribosomal protein L28 [Cyanothece sp. ATCC 51142] Length = 80 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+LT K + VSH++ +T++ NL + + +LR+S A++++E Sbjct: 3 MSRKCQLTGKKANNAFAVSHSHRRTKKLQEANLQWKRVWWAEGNRWVRLRLSTKAIKTLE 62 Query: 61 RQG 63 ++G Sbjct: 63 KKG 65 >gi|326381568|ref|ZP_08203262.1| 50S ribosomal protein L28 [Gordonia neofelifaecis NRRL B-59395] gi|326199815|gb|EGD56995.1| 50S ribosomal protein L28 [Gordonia neofelifaecis NRRL B-59395] Length = 63 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + +K + + L+ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQSVRVEVAPGNKK-RQNVCTSCLK 56 >gi|219850478|ref|YP_002464911.1| 50S ribosomal protein L28 [Chloroflexus aggregans DSM 9485] gi|219544737|gb|ACL26475.1| ribosomal protein L28 [Chloroflexus aggregans DSM 9485] Length = 61 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ CEL K G+ VS + +T R + PN+ + TL++ + Q+RI +R++ Sbjct: 1 MAK-CELCGKKPSFGHNVSFSKRRTNRVWQPNIQKTTLMAPG-GKPVQVRICTQCMRTLA 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|15594695|ref|NP_212484.1| 50S ribosomal protein L28 [Borrelia burgdorferi B31] gi|218249319|ref|YP_002374870.1| ribosomal protein L28 [Borrelia burgdorferi ZS7] gi|221217814|ref|ZP_03589282.1| ribosomal protein L28 [Borrelia burgdorferi 72a] gi|223889036|ref|ZP_03623627.1| ribosomal protein L28 [Borrelia burgdorferi 64b] gi|224533135|ref|ZP_03673735.1| ribosomal protein L28 [Borrelia burgdorferi WI91-23] gi|225549021|ref|ZP_03769996.1| ribosomal protein L28 [Borrelia burgdorferi 94a] gi|225550155|ref|ZP_03771115.1| ribosomal protein L28 [Borrelia burgdorferi 118a] gi|226320431|ref|ZP_03795998.1| ribosomal protein L28 [Borrelia burgdorferi 29805] gi|226321667|ref|ZP_03797193.1| ribosomal protein L28 [Borrelia burgdorferi Bol26] gi|3914732|sp|O51325|RL28_BORBU RecName: Full=50S ribosomal protein L28 gi|226738035|sp|B7J1S5|RL28_BORBZ RecName: Full=50S ribosomal protein L28 gi|2688254|gb|AAC66732.1| ribosomal protein L28 (rpmB) [Borrelia burgdorferi B31] gi|218164507|gb|ACK74568.1| ribosomal protein L28 [Borrelia burgdorferi ZS7] gi|221192491|gb|EEE18710.1| ribosomal protein L28 [Borrelia burgdorferi 72a] gi|223885852|gb|EEF56951.1| ribosomal protein L28 [Borrelia burgdorferi 64b] gi|224511862|gb|EEF82263.1| ribosomal protein L28 [Borrelia burgdorferi WI91-23] gi|225369267|gb|EEG98720.1| ribosomal protein L28 [Borrelia burgdorferi 118a] gi|225370247|gb|EEG99685.1| ribosomal protein L28 [Borrelia burgdorferi 94a] gi|226232856|gb|EEH31609.1| ribosomal protein L28 [Borrelia burgdorferi Bol26] gi|226234184|gb|EEH32898.1| ribosomal protein L28 [Borrelia burgdorferi 29805] gi|312148522|gb|ADQ31181.1| ribosomal protein L28 [Borrelia burgdorferi JD1] gi|312149317|gb|ADQ29388.1| ribosomal protein L28 [Borrelia burgdorferi N40] Length = 92 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSV 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 SIKVSANALRSISKIG-LDAFLKKN 84 >gi|194766073|ref|XP_001965149.1| GF23657 [Drosophila ananassae] gi|190617759|gb|EDV33283.1| GF23657 [Drosophila ananassae] Length = 301 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++PNL R + S +++ + +++ L + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPNLRRSVVHSHVLDAYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 G D +L ++ +L SA L+ ++L+ + + Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQK 176 >gi|291278738|ref|YP_003495573.1| 50S ribosomal protein L28 [Deferribacter desulfuricans SSM1] gi|290753440|dbj|BAI79817.1| 50S ribosomal protein L28 [Deferribacter desulfuricans SSM1] Length = 62 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C++ K M G+ +SHA+N +RR F PN+ ++ +I + + ++ L+ Sbjct: 1 MARRCDICGKGPMFGHTISHAHNVSRRVFYPNVHKVRVI--ENGKVVRKKVCTKCLK 55 >gi|256824927|ref|YP_003148887.1| 50S ribosomal protein L28P [Kytococcus sedentarius DSM 20547] gi|256688320|gb|ACV06122.1| LSU ribosomal protein L28P [Kytococcus sedentarius DSM 20547] Length = 64 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLIS-DIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH+N +T+RR+ PN+ R+ D + ++ L+ Sbjct: 1 MAATCDVCGKGPSFGHNISHSNRRTKRRWNPNIQRVRARVGDKLATVKRINACTSCLK 58 >gi|317121765|ref|YP_004101768.1| 50S ribosomal protein L28P [Thermaerobacter marianensis DSM 12885] gi|315591745|gb|ADU51041.1| LSU ribosomal protein L28P [Thermaerobacter marianensis DSM 12885] Length = 65 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C + K V GN+VSH+N K+RR ++PNL R+ ++ + ++R+ L+S Sbjct: 3 MARRCAICGKGVDYGNQVSHSNRKSRRIWVPNLQRVRAVTPQGVR--RIRVCTTCLKS 58 >gi|225712272|gb|ACO11982.1| 39S ribosomal protein L28, mitochondrial precursor [Lepeophtheirus salmonis] Length = 295 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRR-------RFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + V+ G + P L + S ++++ ++ +++ L+ V Sbjct: 95 WGGEGVIKGLNEPEKQRHYPNPRIPQCNYWWPKLHLAVVYSRVLDKYIEMPVTRRGLKLV 154 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 ++ G D +L + + + + ++ +IL K+ Sbjct: 155 DKAHGFDNYLLRTPVNEIYAWTLLKIKREILLKL 188 >gi|229820091|ref|YP_002881617.1| ribosomal protein L28 [Beutenbergia cavernae DSM 12333] gi|259646728|sp|C5C3F6|RL28_BEUC1 RecName: Full=50S ribosomal protein L28 gi|229566004|gb|ACQ79855.1| ribosomal protein L28 [Beutenbergia cavernae DSM 12333] Length = 63 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G VSH++ +T+RR+ PN+ ++ + + + +L + L+ Sbjct: 1 MAATCDVCAKHPSFGYSVSHSHVRTKRRWNPNIQKVRTVVNGTPK--RLNVCTSCLK 55 >gi|166235356|pdb|2JZ6|A Chain A, Solution Structure Of 50s Ribosomal Protein L28 From Thermotoga Maritima. Northeast Structural Genomics Consortium Target Vr97 Length = 77 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K SGN VSH++ K+ R F PNL ++ ++ ++R+ L+S Sbjct: 6 MAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 62 >gi|312380838|gb|EFR26727.1| hypothetical protein AND_06985 [Anopheles darlingi] Length = 278 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + N+ +RR ++P L R + S ++ + ++ L + Sbjct: 80 WGGEAVIKGFQ---KRNQYKRRVPHFWVPVLRRSVVHSRVLNDYMAVTVTDRTLEQIHDH 136 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 G D +L + +L S L+ +IL++++ Sbjct: 137 HGFDHYLLKTPACDLRSMLAIKLKKKILEELAA 169 >gi|290462043|gb|ADD24069.1| 39S ribosomal protein L28, mitochondrial [Lepeophtheirus salmonis] Length = 295 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRR-------RFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + V+ G + P L + S ++++ ++ +++ L+ V Sbjct: 95 WGGEGVIKGLNEPEKQRHYPNPRIPQCNYWWPKLHLAVVYSRVLDKYIEMPVTRRGLKLV 154 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 ++ G D +L + + + + ++ +IL K+ Sbjct: 155 DKAHGFDNYLLRTPVNEIYAWTLLKIKREILLKL 188 >gi|320186823|gb|EFW61543.1| LSU ribosomal protein L28p [Shigella flexneri CDC 796-83] Length = 66 Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G +D L+ Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLAEL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|302037986|ref|YP_003798308.1| 50S ribosomal protein L28 [Candidatus Nitrospira defluvii] gi|300606050|emb|CBK42383.1| 50S ribosomal protein L28 [Candidatus Nitrospira defluvii] Length = 63 Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C+L K +GN VSHANNKT+R F PNL R+ + + ++R+ LRS Sbjct: 1 MAFACDLCGKKHQTGNNVSHANNKTKRVFNPNLQRVKALVN--GSALRIRVCTRCLRS 56 >gi|121586296|ref|ZP_01676085.1| ribosomal protein L28 [Vibrio cholerae 2740-80] gi|121549416|gb|EAX59444.1| ribosomal protein L28 [Vibrio cholerae 2740-80] Length = 50 Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 27/47 (57%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKY 47 MSRVC++T K GN SHA N T+RRFLPNL + ++ Sbjct: 1 MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKRFV 47 >gi|90414933|ref|ZP_01222897.1| putative ribosomal protein L28 [Photobacterium profundum 3TCK] gi|90323989|gb|EAS40585.1| putative ribosomal protein L28 [Photobacterium profundum 3TCK] Length = 68 Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 ++GN SHA N T+RRFLPNL + ++ +LR++ +R ++++G +D L+ Sbjct: 1 RPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKRFVKLRLTAKGMRIIDKKG-IDIVLA 59 Query: 71 NSKKE 75 + Sbjct: 60 EMRVR 64 >gi|195576654|ref|XP_002078190.1| GD23314 [Drosophila simulans] gi|194190199|gb|EDX03775.1| GD23314 [Drosophila simulans] Length = 302 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++PNL R + S +++ + +++ L + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMS 93 G D +L ++ +L SA L+ ++L+ + Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQ 175 >gi|269137425|ref|YP_003294125.1| ribosomal protein L28 [Edwardsiella tarda EIB202] gi|267983085|gb|ACY82914.1| ribosomal protein L28 [Edwardsiella tarda EIB202] gi|304557499|gb|ADM40163.1| LSU ribosomal protein L28p [Edwardsiella tarda FL6-60] Length = 66 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G ++ L++ Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKG-IEAVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|326505850|dbj|BAJ91164.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326527411|dbj|BAK07980.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 136 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+C +K NKVS +N+KT+++ NL L + ++ +LR+S AL+++E+ Sbjct: 61 RICPFLEKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEAGKRYVKLRLSTKALKTIEKH 120 Query: 63 GGLDRFLSNS 72 G LD + Sbjct: 121 G-LDAVAKKA 129 >gi|195941297|ref|ZP_03086679.1| 50S ribosomal protein L28 [Borrelia burgdorferi 80a] Length = 92 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSV 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +R+S ALRS+ + G LD FL + Sbjct: 61 SIRVSANALRSISKIG-LDTFLKKN 84 >gi|332296145|ref|YP_004438068.1| 50S ribosomal protein L28 [Thermodesulfobium narugense DSM 14796] gi|332179248|gb|AEE14937.1| 50S ribosomal protein L28 [Thermodesulfobium narugense DSM 14796] Length = 62 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C + K +GN VSH+N KTRRRFLPNL + + ++ + + ++S Sbjct: 1 MSKFCAICGKGPSTGNNVSHSNRKTRRRFLPNLQK--IKVNLEGSIKNVYVCTSCIKS 56 >gi|294631612|ref|ZP_06710172.1| 50S ribosomal protein L28 [Streptomyces sp. e14] gi|292834945|gb|EFF93294.1| 50S ribosomal protein L28 [Streptomyces sp. e14] Length = 61 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +S ++ +T RR+ PN+ R+ + + ++ ++ Sbjct: 1 MAANCDVCGKGPGFGNNISFSHRRTSRRWNPNIQRVRTVVGGTPK--RVNACTSCIK 55 >gi|223041138|ref|ZP_03611392.1| ribosomal protein L28 [Campylobacter rectus RM3267] gi|222877574|gb|EEF12701.1| ribosomal protein L28 [Campylobacter rectus RM3267] Length = 63 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC +T K M GN VSHA N+T+RRFLPNL I + + +++++ LR++ Sbjct: 1 MSRVCAITGKGPMVGNNVSHAKNRTKRRFLPNLRTIRVTLED-GTTRKIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|224531933|ref|ZP_03672565.1| ribosomal protein L28 [Borrelia valaisiana VS116] gi|224511398|gb|EEF81804.1| ribosomal protein L28 [Borrelia valaisiana VS116] Length = 92 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 NIKVSANALRSISKMG-LDAFLKKN 84 >gi|123966217|ref|YP_001011298.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9515] gi|166226601|sp|A2BWN0|RL28_PROM5 RecName: Full=50S ribosomal protein L28 gi|123200583|gb|ABM72191.1| 50S ribosomal protein L28 [Prochlorococcus marinus str. MIT 9515] Length = 78 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L ++ ++IS AL+S++ Sbjct: 1 MSRVCELTGARANNGMAVSHSHIRTKKLQQVNLQKRRLWWQEGKKWINIKISTKALKSIQ 60 Query: 61 RQG 63 + G Sbjct: 61 KVG 63 >gi|224368343|ref|YP_002602506.1| 50S ribosomal protein L28 [Desulfobacterium autotrophicum HRM2] gi|259646733|sp|C0QM36|RL28_DESAH RecName: Full=50S ribosomal protein L28 gi|223691059|gb|ACN14342.1| RpmB [Desulfobacterium autotrophicum HRM2] Length = 74 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+ C++ K M GN VSHA+N +RRF PNL R+ + D Q ++ + ++ Sbjct: 1 MSKECKICGKKPMVGNNVSHAHNVNKRRFNPNLQRVKALFD--GQVRRIDVCTSCIK 55 >gi|281341549|gb|EFB17133.1| hypothetical protein PANDA_008919 [Ailuropoda melanoleuca] Length = 266 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 47/105 (44%), Gaps = 16/105 (15%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + G++ + + + ++ + P L + L S+I++ K+ + +++ L ++ Sbjct: 80 WGGEGWILGHRYINNDKLSKRVKKVWKPQLFQRELYSEILDTKFTVTVTQRTLDLIDEAY 139 Query: 64 GLDRFLSN------------SKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + KE+L S L+ +L +++ + Sbjct: 140 GFDLYILKASRGPAHSTSWQTPKEDLCSKFGMDLKRGMLLRLARQ 184 >gi|153005375|ref|YP_001379700.1| 50S ribosomal protein L28 [Anaeromyxobacter sp. Fw109-5] gi|166226537|sp|A7HDC0|RL28_ANADF RecName: Full=50S ribosomal protein L28 gi|152028948|gb|ABS26716.1| ribosomal protein L28 [Anaeromyxobacter sp. Fw109-5] Length = 73 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C++ K + GN VSHANNK++ R LPNL + D + + + L+ Sbjct: 1 MARRCDICGKGPLVGNNVSHANNKSKTRSLPNLRSVRATVDGTVKHVR--VCTRCLK 55 >gi|33861459|ref|NP_893020.1| 50S ribosomal protein L28 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|67461501|sp|Q7V1H0|RL28_PROMP RecName: Full=50S ribosomal protein L28 gi|33634036|emb|CAE19361.1| 50S ribosomal protein L28 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 78 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVCELT +G VSH++ +T++ NL + L ++ ++IS AL+S++ Sbjct: 1 MSRVCELTGAKANNGMAVSHSHIRTKKLQQVNLQKRRLWWQEGKKWVNIKISTKALKSIQ 60 Query: 61 RQG 63 + G Sbjct: 61 KVG 63 >gi|332670952|ref|YP_004453960.1| 50S ribosomal protein L28 [Cellulomonas fimi ATCC 484] gi|332339990|gb|AEE46573.1| ribosomal protein L28 [Cellulomonas fimi ATCC 484] Length = 63 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ R+ + + ++ + L+ Sbjct: 1 MAANCDVCAKGPSFGHSISHSHVRTKRRWNPNIQRVRAVVAGTPK--RINVCTSCLK 55 >gi|288550206|ref|ZP_05969612.2| hypothetical protein ENTCAN_08233 [Enterobacter cancerogenus ATCC 35316] gi|296100495|ref|YP_003610641.1| ribosomal protein L28 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288316122|gb|EFC55060.1| ribosomal protein L28 [Enterobacter cancerogenus ATCC 35316] gi|295054954|gb|ADF59692.1| ribosomal protein L28 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 66 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G +D LS Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLSEL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|302525014|ref|ZP_07277356.1| ribosomal protein L28 [Streptomyces sp. AA4] gi|302433909|gb|EFL05725.1| ribosomal protein L28 [Streptomyces sp. AA4] Length = 63 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + + ++K +L ++ Sbjct: 1 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQVVHAKVGVSQRK-RLNACTSCIK 56 >gi|194856401|ref|XP_001968743.1| GG25036 [Drosophila erecta] gi|190660610|gb|EDV57802.1| GG25036 [Drosophila erecta] Length = 301 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++PNL R + S +++ + +++ L + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPNLRRSVVHSYVLDSYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMS 93 G D +L ++ +L SA L+ ++L+ + Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQ 175 >gi|108804206|ref|YP_644143.1| 50S ribosomal protein L28P [Rubrobacter xylanophilus DSM 9941] gi|122381810|sp|Q1AW97|RL28_RUBXD RecName: Full=50S ribosomal protein L28 gi|108765449|gb|ABG04331.1| LSU ribosomal protein L28P [Rubrobacter xylanophilus DSM 9941] Length = 71 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++VC K GN SH+ TRRR+ PNL ++ + ++ + L+ Sbjct: 1 MAKVCYSCGKGPSFGNARSHSLRATRRRWNPNLQKVRIR--EGGATKRVWVCASCLK 55 >gi|124809906|ref|XP_001348713.1| mitochondrial ribosomal protein L28 precursor, putative [Plasmodium falciparum 3D7] gi|23497612|gb|AAN37152.1| mitochondrial ribosomal protein L28 precursor, putative [Plasmodium falciparum 3D7] Length = 281 Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + PN+ + ++S+ + +R++ AL +++ GG D ++ + E Sbjct: 60 KVSYSLKKTRIKLKPNVFKKHIVSNELNTIIPNVRLTTSALHAMDDAGGFDNYILRTPPE 119 Query: 76 NL-SARMRTLRSQI 88 L S LR+ + Sbjct: 120 ELRSNLGEKLRNVM 133 >gi|23464931|ref|NP_695534.1| 50S ribosomal protein L28 [Bifidobacterium longum NCC2705] gi|189439951|ref|YP_001955032.1| 50S ribosomal protein L28 [Bifidobacterium longum DJO10A] gi|213691254|ref|YP_002321840.1| ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227545779|ref|ZP_03975828.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622523|ref|ZP_04665554.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296453486|ref|YP_003660629.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. longum JDM301] gi|312133356|ref|YP_004000695.1| rpmb [Bifidobacterium longum subsp. longum BBMN68] gi|317481969|ref|ZP_07940994.1| ribosomal protein L28 [Bifidobacterium sp. 12_1_47BFAA] gi|322688453|ref|YP_004208187.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis 157F] gi|322690474|ref|YP_004220044.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. longum JCM 1217] gi|67461534|sp|Q8G7D7|RL28_BIFLO RecName: Full=50S ribosomal protein L28 gi|226738034|sp|B3DTR5|RL28_BIFLD RecName: Full=50S ribosomal protein L28 gi|23325526|gb|AAN24170.1| 50S ribosomal protein L28 [Bifidobacterium longum NCC2705] gi|189428386|gb|ACD98534.1| Ribosomal protein L28 [Bifidobacterium longum DJO10A] gi|213522715|gb|ACJ51462.1| ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227213895|gb|EEI81734.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514520|gb|EEQ54387.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296182917|gb|ADG99798.1| ribosomal protein L28 [Bifidobacterium longum subsp. longum JDM301] gi|311772579|gb|ADQ02067.1| RpmB [Bifidobacterium longum subsp. longum BBMN68] gi|316916536|gb|EFV37933.1| ribosomal protein L28 [Bifidobacterium sp. 12_1_47BFAA] gi|320455330|dbj|BAJ65952.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. longum JCM 1217] gi|320457318|dbj|BAJ67939.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459789|dbj|BAJ70409.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis 157F] Length = 64 Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ +T+R F PNL + D + +LR+ L+ Sbjct: 1 MAARCAVCGKGPQTGFTVSHSHRRTKRSFRPNLQSVRTTID--GENTRLRVCVKCLK 55 >gi|296130145|ref|YP_003637395.1| ribosomal protein L28 [Cellulomonas flavigena DSM 20109] gi|296021960|gb|ADG75196.1| ribosomal protein L28 [Cellulomonas flavigena DSM 20109] Length = 63 Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G+ +SH++ +T+RR+ PN+ R+ ++ + +L + L+ Sbjct: 1 MAANCDVCAKRPSFGHSISHSHVRTKRRWNPNIQRVRVVVAGTPK--RLNVCTSCLK 55 >gi|149278718|ref|ZP_01884854.1| 50S ribosomal protein L28 [Pedobacter sp. BAL39] gi|149230713|gb|EDM36096.1| 50S ribosomal protein L28 [Pedobacter sp. BAL39] Length = 67 Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 M+G VSH+N KT+R+F PNL ++ L++S A++++ + G Sbjct: 1 MAMTGFNVSHSNVKTKRKFYPNLQLQKFYIPDEDRWITLKVSTSAIKTINKIG 53 >gi|294101851|ref|YP_003553709.1| ribosomal protein L28 [Aminobacterium colombiense DSM 12261] gi|293616831|gb|ADE56985.1| ribosomal protein L28 [Aminobacterium colombiense DSM 12261] Length = 64 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVCE + ++GN VSH+N TRRR+L NL + + + +++I L+S Sbjct: 1 MARVCECCGRGPVTGNAVSHSNRHTRRRWLVNLQNVKVDLGA-GETRRMKICTKCLKS 57 >gi|148269805|ref|YP_001244265.1| 50S ribosomal protein L28 [Thermotoga petrophila RKU-1] gi|147735349|gb|ABQ46689.1| LSU ribosomal protein L28P [Thermotoga petrophila RKU-1] Length = 86 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K SGN VSH++ K+ R F PNL ++ ++ ++R+ L+S Sbjct: 17 MAKRCEVCGKAPRSGNTVSHSDKKSGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 73 >gi|297571645|ref|YP_003697419.1| ribosomal protein L28 [Arcanobacterium haemolyticum DSM 20595] gi|296931992|gb|ADH92800.1| ribosomal protein L28 [Arcanobacterium haemolyticum DSM 20595] Length = 63 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VCE+ K G VSH++ +T RR+ PN+ R+ + +L + L+ Sbjct: 1 MASVCEVCGKGPNFGKSVSHSHVRTSRRWNPNIQRVRALVK--GAPKRLNVCTSCLK 55 >gi|111023473|ref|YP_706445.1| 50S ribosomal protein L28 [Rhodococcus jostii RHA1] gi|226365974|ref|YP_002783757.1| 50S ribosomal protein L28 [Rhodococcus opacus B4] gi|110823003|gb|ABG98287.1| 50S ribosomal protein L28 [Rhodococcus jostii RHA1] gi|226244464|dbj|BAH54812.1| 50S ribosomal protein L28 [Rhodococcus opacus B4] Length = 63 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ + L+ Sbjct: 1 MAAVCDVCAKGPGFGKSVSHSHRRTNRRWNPNIQTVRAEV-APGNTRKVNVCTSCLK 56 >gi|291457128|ref|ZP_06596518.1| ribosomal protein L28 [Bifidobacterium breve DSM 20213] gi|291380963|gb|EFE88481.1| ribosomal protein L28 [Bifidobacterium breve DSM 20213] Length = 64 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C + K +G VSH++ +T+R F PNL + D + +LR+ L+ Sbjct: 1 MAARCAVCGKGPQTGFTVSHSHRRTKRSFRPNLQSVRTTID--GENTRLRVCGKCLK 55 >gi|224534189|ref|ZP_03674767.1| ribosomal protein L28 [Borrelia spielmanii A14S] gi|224514291|gb|EEF84607.1| ribosomal protein L28 [Borrelia spielmanii A14S] Length = 92 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M G+ V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGSNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 NIKVSASALRSISKLG-LDAFLKKN 84 >gi|195342602|ref|XP_002037889.1| GM18510 [Drosophila sechellia] gi|194132739|gb|EDW54307.1| GM18510 [Drosophila sechellia] Length = 302 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++PNL R + S +++ + +++ L + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMS 93 G D +L ++ +L SA L+ ++L+ + Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQ 175 >gi|157364509|ref|YP_001471276.1| ribosomal protein L28 [Thermotoga lettingae TMO] gi|166987917|sp|A8F7S8|RL28_THELT RecName: Full=50S ribosomal protein L28 gi|157315113|gb|ABV34212.1| ribosomal protein L28 [Thermotoga lettingae TMO] Length = 65 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE+ K ++G VSH+N TRR F PNL +I +I++ +R+ L+ Sbjct: 1 MAKRCEICGKGPVAGKNVSHSNRHTRRMFRPNLQKIRVITED-GTVRTMRVCTRCLK 56 >gi|111115174|ref|YP_709792.1| 50S ribosomal protein L28 [Borrelia afzelii PKo] gi|122956384|sp|Q0SNG2|RL28_BORAP RecName: Full=50S ribosomal protein L28 gi|110890448|gb|ABH01616.1| ribosomal protein L28 [Borrelia afzelii PKo] Length = 92 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGARQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 +++S ALRS+ + G LD FL + Sbjct: 61 NIKVSANALRSISKIG-LDAFLKKN 84 >gi|296106029|ref|YP_003617729.1| large subunit ribosomal protein L28 [Legionella pneumophila 2300/99 Alcoy] gi|295647930|gb|ADG23777.1| large subunit ribosomal protein L28 [Legionella pneumophila 2300/99 Alcoy] gi|307609285|emb|CBW98760.1| 50S ribosomal protein L28 [Legionella pneumophila 130b] Length = 66 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M G+KVSHANNKT+RRFLPN+ + + LR+S +R +++ G + L Sbjct: 1 MVGHKVSHANNKTKRRFLPNIQNHKFWVEEENRFVTLRLSTKGMRIIDKLG-IKAVLDKI 59 Query: 73 KKE 75 + + Sbjct: 60 RAK 62 >gi|32266788|ref|NP_860820.1| 50S ribosomal protein L28 [Helicobacter hepaticus ATCC 51449] gi|67461504|sp|Q7VGN1|RL28_HELHP RecName: Full=50S ribosomal protein L28 gi|32262840|gb|AAP77886.1| ribosomal protein L28 [Helicobacter hepaticus ATCC 51449] Length = 62 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C T K M GN VSHANNKT++R LPNL I L + +++++ LR+++ Sbjct: 1 MARKCFFTGKGPMVGNNVSHANNKTKKRSLPNLRSIRLKLED-GTSVRVKVAASTLRTIK 59 Query: 61 RQ 62 + Sbjct: 60 KY 61 >gi|139439773|ref|ZP_01773164.1| Hypothetical protein COLAER_02195 [Collinsella aerofaciens ATCC 25986] gi|133774923|gb|EBA38743.1| Hypothetical protein COLAER_02195 [Collinsella aerofaciens ATCC 25986] Length = 78 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VCE+ K ++G +SH++ T R+F PN+ R+ ++ D + ++ + L+S Sbjct: 17 MSKVCEVCGKHPVAGRSISHSHRVTNRKFRPNIQRVYVVVDGHRR--KMNVCSTCLKS 72 >gi|95931488|ref|ZP_01314186.1| ribosomal protein L28 [Desulfuromonas acetoxidans DSM 684] gi|95132458|gb|EAT14159.1| ribosomal protein L28 [Desulfuromonas acetoxidans DSM 684] Length = 61 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 SR CE+ K ++GN VSHA+NKTR+ + PNL ++ + +++ +RS Sbjct: 1 SRTCEICGKKPVTGNNVSHAHNKTRKVWYPNLQKVRAV--KNGSVQTMKVCTRCIRS 55 >gi|226305909|ref|YP_002765869.1| 50S ribosomal protein L28 [Rhodococcus erythropolis PR4] gi|229491332|ref|ZP_04385156.1| ribosomal protein L28 [Rhodococcus erythropolis SK121] gi|226185026|dbj|BAH33130.1| probable 50S ribosomal protein L28 [Rhodococcus erythropolis PR4] gi|229321617|gb|EEN87414.1| ribosomal protein L28 [Rhodococcus erythropolis SK121] Length = 63 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G VSH++ +T RR+ PN+ + ++ + L+ Sbjct: 1 MAAVCDVCAKGPGFGKSVSHSHRRTNRRWNPNIQSVRTEV-APGNTRKVNVCTSCLK 56 >gi|332703485|ref|ZP_08423573.1| 50S ribosomal protein L28 [Desulfovibrio africanus str. Walvis Bay] gi|332553634|gb|EGJ50678.1| 50S ribosomal protein L28 [Desulfovibrio africanus str. Walvis Bay] Length = 67 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE+ +K GN VSHANNKT+R F PNL ++ ++ + +++ +RS Sbjct: 1 MSRKCEICEKHRSVGNNVSHANNKTKRVFQPNLQKVRVLLPS-GEVKHMKVCTRCIRS 57 >gi|269794443|ref|YP_003313898.1| 50S ribosomal protein L28P [Sanguibacter keddieii DSM 10542] gi|269096628|gb|ACZ21064.1| LSU ribosomal protein L28P [Sanguibacter keddieii DSM 10542] Length = 63 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ CE+ K+ G+ +SH++ +T+RR+ PN+ R+ I + +L + L+ Sbjct: 1 MAANCEVCAKSPSFGHSISHSHVRTKRRWNPNIQRVRAIVN--GAPKRLNVCTSCLK 55 >gi|195472823|ref|XP_002088698.1| GE11277 [Drosophila yakuba] gi|194174799|gb|EDW88410.1| GE11277 [Drosophila yakuba] Length = 301 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++PNL R + S +++ + +++ L + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 G D +L ++ +L SA L+ ++L+ + + Sbjct: 144 HGFDHYLLKNRACDLRSALALKLKREVLQALQK 176 >gi|20129239|ref|NP_608887.1| mitochondrial ribosomal protein L28 [Drosophila melanogaster] gi|34925528|sp|Q9VMX0|RM28_DROME RecName: Full=39S ribosomal protein L28, mitochondrial; Short=L28mt; Short=MRP-L28; Flags: Precursor gi|7296915|gb|AAF52188.1| mitochondrial ribosomal protein L28 [Drosophila melanogaster] gi|157816666|gb|ABV82326.1| IP19992p [Drosophila melanogaster] Length = 302 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 24 KTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-S 78 +T+RR ++PNL R + S +++ + +++ L + G D +L ++ +L S Sbjct: 101 QTKRRVPHFWVPNLRRSVVHSHVLDCYMSVVVTERTLEQIHECHGFDHYLLKNRACDLRS 160 Query: 79 ARMRTLRSQILKKMS 93 A L+ ++L+ + Sbjct: 161 ALALKLKREVLQALQ 175 >gi|253581407|ref|ZP_04858633.1| ribosomal protein L28 [Fusobacterium varium ATCC 27725] gi|257470806|ref|ZP_05634896.1| 50S ribosomal protein L28P [Fusobacterium ulcerans ATCC 49185] gi|317065010|ref|ZP_07929495.1| LSU ribosomal protein L28P [Fusobacterium ulcerans ATCC 49185] gi|251836771|gb|EES65305.1| ribosomal protein L28 [Fusobacterium varium ATCC 27725] gi|313690686|gb|EFS27521.1| LSU ribosomal protein L28P [Fusobacterium ulcerans ATCC 49185] Length = 85 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL T++ + ++++ L+++ Sbjct: 2 QRCEITGTGIISGNQISHSHRLTRRVWKPNLQVTTIVVN--GSPVKVKVCSRTLKTLRGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LSAR+ Sbjct: 60 SEVEVMNILKANASTLSARLAK 81 >gi|237833967|ref|XP_002366281.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|211963945|gb|EEA99140.1| hypothetical protein, conserved [Toxoplasma gondii ME49] gi|221486504|gb|EEE24765.1| conserved hypothetical protein [Toxoplasma gondii GT1] gi|221508273|gb|EEE33860.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 282 Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 K + + +TRR+ PN+ R T S ++ +R++ AL +++ GG D ++ + + Sbjct: 60 KRTFSMRRTRRKIKPNVFRRTFTSSLLNVTIPNVRVTTSALHAMDDMGGFDAYILRTPPQ 119 Query: 76 NLSARMRTLRSQIL 89 L + M Q++ Sbjct: 120 ELRSHMGERMRQVM 133 >gi|170581866|ref|XP_001895873.1| hypothetical protein [Brugia malayi] gi|158597041|gb|EDP35277.1| conserved hypothetical protein [Brugia malayi] Length = 593 Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 47/88 (53%), Gaps = 8/88 (9%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDR 67 T+K ++ + V H F P+L ++ S+++++ ++ +++ R +++ GLD Sbjct: 121 TRKKILPRHWVPHF-------FFPSLKKVVAYSEVLDKHMKITMTERTCRLIDQHFGLDL 173 Query: 68 FLSNSKKENL-SARMRTLRSQILKKMSE 94 +L + + ++ S L+ +IL +++ Sbjct: 174 YLLETPEIDIASKLGNKLKREILLVLAK 201 >gi|18447483|gb|AAL68304.1| RE47667p [Drosophila melanogaster] Length = 302 Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 24 KTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-S 78 +T+RR ++PNL R + S +++ + +++ L + G D +L ++ +L S Sbjct: 101 QTKRRVPHFWVPNLRRSVVHSHVLDCYMSVVVTERTLEQIHECHGFDHYLLKNRACDLRS 160 Query: 79 ARMRTLRSQILKKMS 93 A L+ ++L+ + Sbjct: 161 ALALKLKREVLQALQ 175 >gi|206900831|ref|YP_002251217.1| ribosomal protein L28 [Dictyoglomus thermophilum H-6-12] gi|217967890|ref|YP_002353396.1| ribosomal protein L28 [Dictyoglomus turgidum DSM 6724] gi|226732827|sp|B5YFA9|RL28_DICT6 RecName: Full=50S ribosomal protein L28 gi|226732828|sp|B8E2D8|RL28_DICTD RecName: Full=50S ribosomal protein L28 gi|206739934|gb|ACI18992.1| ribosomal protein L28 [Dictyoglomus thermophilum H-6-12] gi|217336989|gb|ACK42782.1| ribosomal protein L28 [Dictyoglomus turgidum DSM 6724] Length = 63 Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MSR CE+ K +G +VSH++ +T+ R+LPNL ++ + + + +++ L+ Sbjct: 1 MSRRCEICGKGPWTGLQVSHSHRRTKTRWLPNLHKVRALVN--GKVKTIKVCTRCLK 55 >gi|86606853|ref|YP_475616.1| 50S ribosomal protein L28 [Synechococcus sp. JA-3-3Ab] gi|86608530|ref|YP_477292.1| 50S ribosomal protein L28 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502886|sp|Q2JMK8|RL28_SYNJB RecName: Full=50S ribosomal protein L28 gi|123504396|sp|Q2JQF8|RL28_SYNJA RecName: Full=50S ribosomal protein L28 gi|86555395|gb|ABD00353.1| ribosomal protein L28 [Synechococcus sp. JA-3-3Ab] gi|86557072|gb|ABD02029.1| ribosomal protein L28 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 78 Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+LT K + +SH++ +T+R NL + + ++ +LR+S AL++++ Sbjct: 1 MARRCQLTNKKRNNAFAISHSHRRTKRLQEVNLQWKRIWWEEGKRFVRLRLSTKALKTLK 60 Query: 61 RQG 63 +G Sbjct: 61 AKG 63 >gi|325118683|emb|CBZ54234.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 282 Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 K + + +TRR+ PN+ R T S ++ +R++ AL +++ GG D ++ + + Sbjct: 60 KRTFSMRRTRRKLKPNVFRRTFTSSLLNVSIPNVRVTTSALHAMDDMGGFDAYILRTPPQ 119 Query: 76 NLSARMRTLRSQIL 89 L + M Q++ Sbjct: 120 ELRSHMGERMRQVM 133 >gi|294784947|ref|ZP_06750235.1| 50S ribosomal protein L28 [Fusobacterium sp. 3_1_27] gi|294486661|gb|EFG34023.1| 50S ribosomal protein L28 [Fusobacterium sp. 3_1_27] Length = 85 Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL TL+ + ++++ L++++ Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLVVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LS R+ Sbjct: 60 SEIEVMRILKANIATLSERLLK 81 >gi|258645746|ref|ZP_05733215.1| ribosomal protein L28 [Dialister invisus DSM 15470] gi|260403115|gb|EEW96662.1| ribosomal protein L28 [Dialister invisus DSM 15470] Length = 63 Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ CE+ K +G VSH++ KT+R + PN+ R+ + +D Q ++ + LRS Sbjct: 1 MANYCEICGKHTATGFNVSHSHLKTKRTWKPNIQRVRVKAD--GQVKRMNVCTRCLRS 56 >gi|161616808|ref|YP_001590773.1| hypothetical protein SPAB_04627 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366172|gb|ABX69940.1| hypothetical protein SPAB_04627 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|321226781|gb|EFX51831.1| LSU ribosomal protein L28p [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322680941|gb|EFY76975.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323210479|gb|EFZ95365.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323257302|gb|EGA41001.1| 50S ribosomal protein L28 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 66 Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G + Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRIIDKKG------IET 54 Query: 73 KKENLSARMRT 83 L AR Sbjct: 55 VLSELRARGEK 65 >gi|158296736|ref|XP_317077.4| AGAP008376-PA [Anopheles gambiae str. PEST] gi|157014855|gb|EAA12310.5| AGAP008376-PA [Anopheles gambiae str. PEST] Length = 289 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 4/86 (4%) Query: 10 KTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 K N+ + ++P L R + S ++ + + ++ L + G D +L Sbjct: 94 KGFQKRNQY---KRRVPHFWVPVLRRSVVHSRVLNEYMAVTVTDRTLAQIHDHHGFDHYL 150 Query: 70 SNSKKENL-SARMRTLRSQILKKMSE 94 + +L S L+ ++L++++ Sbjct: 151 LKTPACDLRSLLAIKLKKKVLEELAA 176 >gi|15643026|ref|NP_228069.1| 50S ribosomal protein L28 [Thermotoga maritima MSB8] gi|4980752|gb|AAD35344.1|AE001708_12 ribosomal protein L28 [Thermotoga maritima MSB8] Length = 72 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K SGN VSH++ K+ R F PNL ++ ++ ++R+ L+S Sbjct: 3 MAKRCEVCGKAPRSGNTVSHSDKKSGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 59 >gi|320527289|ref|ZP_08028474.1| ribosomal protein L28 [Solobacterium moorei F0204] gi|320132313|gb|EFW24858.1| ribosomal protein L28 [Solobacterium moorei F0204] Length = 88 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 MSRVC ++ K MSGN+ SH+ TRR++ NL ++ +I D + ++IS AL+++ Sbjct: 22 MSRVCAVSGKKAMSGNRRSHSLRATRRKWNVNLQKVHMIVD--GKPQTVKISARALKTL 78 >gi|239618031|ref|YP_002941353.1| ribosomal protein L28 [Kosmotoga olearia TBF 19.5.1] gi|259646742|sp|C5CFE0|RL28_KOSOT RecName: Full=50S ribosomal protein L28 gi|239506862|gb|ACR80349.1| ribosomal protein L28 [Kosmotoga olearia TBF 19.5.1] Length = 63 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VCE+ K +GN VSH+N K +R + PN+ ++ +I D + ++R+ L+ Sbjct: 1 MSKVCEICGKRPTTGNTVSHSNKKNKRWWKPNVQKVKVIVD--GEVKKMRVCTKCLK 55 >gi|320536367|ref|ZP_08036408.1| ribosomal protein L28 [Treponema phagedenis F0421] gi|320146779|gb|EFW38354.1| ribosomal protein L28 [Treponema phagedenis F0421] Length = 63 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K ++G+ VS + N T+R + PNL + + +++ + +++ L+S Sbjct: 1 MARKCEICGKGTVAGHNVSKSMNHTKRVWKPNL--VEVKTEVGGRTLTVKMCTRCLKS 56 >gi|254383281|ref|ZP_04998634.1| 50S ribosomal protein L28 [Streptomyces sp. Mg1] gi|302537157|ref|ZP_07289499.1| ribosomal protein L28 [Streptomyces sp. C] gi|194342179|gb|EDX23145.1| 50S ribosomal protein L28 [Streptomyces sp. Mg1] gi|302446052|gb|EFL17868.1| ribosomal protein L28 [Streptomyces sp. C] Length = 61 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +T RR+ PN+ R+ + + + +L ++ Sbjct: 1 MAANCDVCAKGPSFGNNISHSHRRTSRRWNPNIQRVRAVVNGTPK--RLNACTSCIK 55 >gi|170288491|ref|YP_001738729.1| ribosomal protein L28 [Thermotoga sp. RQ2] gi|281412311|ref|YP_003346390.1| ribosomal protein L28 [Thermotoga naphthophila RKU-10] gi|14195689|sp|Q9WY96|RL28_THEMA RecName: Full=50S ribosomal protein L28 gi|226699179|sp|B1L9P8|RL28_THESQ RecName: Full=50S ribosomal protein L28 gi|170175994|gb|ACB09046.1| ribosomal protein L28 [Thermotoga sp. RQ2] gi|281373414|gb|ADA66976.1| ribosomal protein L28 [Thermotoga naphthophila RKU-10] Length = 70 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K SGN VSH++ K+ R F PNL ++ ++ ++R+ L+S Sbjct: 1 MAKRCEVCGKAPRSGNTVSHSDKKSGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 57 >gi|162452706|ref|YP_001615073.1| 50S ribosomal protein L28 [Sorangium cellulosum 'So ce 56'] gi|161163288|emb|CAN94593.1| 50S ribosomal protein L28 [Sorangium cellulosum 'So ce 56'] Length = 74 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ ++T K + VSH+N KT+R L N+ + + + +L ++ +R+++ Sbjct: 1 MAKS-DITGKRKLLAQNVSHSNIKTKRWQLVNIQTRRVWVPELNRFVKLNLTTRDIRTID 59 Query: 61 RQG 63 + G Sbjct: 60 KIG 62 >gi|11467375|ref|NP_043232.1| ribosomal protein L28 [Cyanophora paradoxa] gi|1350638|sp|P48129|RK28_CYAPA RecName: Full=50S ribosomal protein L28, cyanelle gi|1016176|gb|AAA81263.1| ribosomal protein L28 [Cyanophora paradoxa] Length = 70 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CELT K +G VSH++ +T+ NL + S +++ +L++S ++ + Sbjct: 1 MARQCELTGKKANNGYTVSHSHRRTKCLQKANLQTKRIWSPTLKRWLKLQVSTKVIKDL- 59 Query: 61 RQGGLDRFLS 70 ++ +D L Sbjct: 60 KRKSIDALLK 69 >gi|291086415|ref|ZP_06355757.2| hypothetical protein CIT292_10430 [Citrobacter youngae ATCC 29220] gi|291068198|gb|EFE06307.1| ribosomal protein L28 [Citrobacter youngae ATCC 29220] Length = 66 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M+GN SHA N T+RRFLPNL + ++ LR+S +R ++++G + Sbjct: 1 MTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG------IET 54 Query: 73 KKENLSARMRT 83 L AR Sbjct: 55 VLSELRARGEK 65 >gi|226326897|ref|ZP_03802415.1| hypothetical protein PROPEN_00757 [Proteus penneri ATCC 35198] gi|225204734|gb|EEG87088.1| hypothetical protein PROPEN_00757 [Proteus penneri ATCC 35198] Length = 66 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 MSGN SHA N T+RRFLPNL + ++ LR+S +R ++++G ++ L++ Sbjct: 1 MSGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IESVLADL 59 Query: 73 KKE 75 + Sbjct: 60 RAR 62 >gi|119953145|ref|YP_945354.1| 50S ribosomal protein L28 [Borrelia turicatae 91E135] gi|254801503|sp|A1QZE2|RL28_BORT9 RecName: Full=50S ribosomal protein L28 gi|119861916|gb|AAX17684.1| LSU ribosomal protein L28P [Borrelia turicatae 91E135] Length = 92 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M R CE+T K M GN V H KTRR F NL + + Sbjct: 1 MGRECEITGKKTMFGNNVPRKGLSRKKGGGGQHIGVKTRRTFKVNLINKKFFVPELGKSI 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +++S LRS+ + G L FL + K+ Sbjct: 61 NIKVSASTLRSISKLG-LSVFLKKNSKK 87 >gi|215411756|ref|ZP_03420552.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 94_M4241A] gi|298525561|ref|ZP_07012970.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis 94_M4241A] gi|298495355|gb|EFI30649.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis 94_M4241A] Length = 78 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G+ VSH++ ++RRR+ PN+ + T ++ +LR+S ++ ++ Sbjct: 1 MSAHCQVTGRKPGFGHTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|15609195|ref|NP_216574.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Rv] gi|15841547|ref|NP_336584.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|31793241|ref|NP_855734.1| 50S ribosomal protein L28 [Mycobacterium bovis AF2122/97] gi|121637944|ref|YP_978167.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661872|ref|YP_001283395.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148823274|ref|YP_001288028.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis F11] gi|167966863|ref|ZP_02549140.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|215404130|ref|ZP_03416311.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|215430981|ref|ZP_03428900.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|215446276|ref|ZP_03433028.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|219558026|ref|ZP_03537102.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T17] gi|224990438|ref|YP_002645125.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Tokyo 172] gi|253798885|ref|YP_003031886.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis KZN 1435] gi|254232228|ref|ZP_04925555.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis C] gi|254364874|ref|ZP_04980920.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis str. Haarlem] gi|254551085|ref|ZP_05141532.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187035|ref|ZP_05764509.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CPHL_A] gi|260201168|ref|ZP_05768659.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T46] gi|260205343|ref|ZP_05772834.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis K85] gi|289443561|ref|ZP_06433305.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T46] gi|289447678|ref|ZP_06437422.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis CPHL_A] gi|289554158|ref|ZP_06443368.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis KZN 605] gi|289570169|ref|ZP_06450396.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T17] gi|289574737|ref|ZP_06454964.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis K85] gi|289745333|ref|ZP_06504711.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|289745989|ref|ZP_06505367.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis 02_1987] gi|289750652|ref|ZP_06510030.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T92] gi|289754168|ref|ZP_06513546.1| ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|289758178|ref|ZP_06517556.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|289762215|ref|ZP_06521593.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis GM 1503] gi|294996997|ref|ZP_06802688.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 210] gi|297634635|ref|ZP_06952415.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN 4207] gi|297731622|ref|ZP_06960740.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN R506] gi|306776296|ref|ZP_07414633.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu001] gi|306780083|ref|ZP_07418420.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu002] gi|306784829|ref|ZP_07423151.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu003] gi|306789192|ref|ZP_07427514.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu004] gi|306793525|ref|ZP_07431827.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu005] gi|306797910|ref|ZP_07436212.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu006] gi|306803787|ref|ZP_07440455.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu008] gi|306808361|ref|ZP_07445029.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu007] gi|306968184|ref|ZP_07480845.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu009] gi|306972411|ref|ZP_07485072.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu010] gi|307080118|ref|ZP_07489288.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu011] gi|307084697|ref|ZP_07493810.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu012] gi|313658956|ref|ZP_07815836.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN V2475] gi|54039005|sp|P66149|RL28B_MYCBO RecName: Full=50S ribosomal protein L28-2 gi|54041849|sp|P66148|RL28B_MYCTU RecName: Full=50S ribosomal protein L28-2 gi|3242288|emb|CAA17272.1| Probable 50S ribosomal protein L28 RpmB2 [Mycobacterium tuberculosis H37Rv] gi|13881793|gb|AAK46398.1| ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|31618833|emb|CAD96937.1| ribosomal protein L28 [Mycobacterium bovis AF2122/97] gi|121493591|emb|CAL72065.1| ribosomal protein L28 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601287|gb|EAY60297.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis C] gi|134150388|gb|EBA42433.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis str. Haarlem] gi|148506024|gb|ABQ73833.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148721801|gb|ABR06426.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis F11] gi|224773551|dbj|BAH26357.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Tokyo 172] gi|253320388|gb|ACT24991.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis KZN 1435] gi|289416480|gb|EFD13720.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T46] gi|289420636|gb|EFD17837.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis CPHL_A] gi|289438790|gb|EFD21283.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis KZN 605] gi|289539168|gb|EFD43746.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis K85] gi|289543923|gb|EFD47571.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T17] gi|289685861|gb|EFD53349.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|289686517|gb|EFD54005.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis 02_1987] gi|289691239|gb|EFD58668.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis T92] gi|289694755|gb|EFD62184.1| ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|289709721|gb|EFD73737.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis GM 1503] gi|289713742|gb|EFD77754.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|308215251|gb|EFO74650.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu001] gi|308326988|gb|EFP15839.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu002] gi|308330423|gb|EFP19274.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu003] gi|308334257|gb|EFP23108.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu004] gi|308338058|gb|EFP26909.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu005] gi|308341749|gb|EFP30600.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu006] gi|308345235|gb|EFP34086.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu007] gi|308349536|gb|EFP38387.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu008] gi|308354167|gb|EFP43018.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu009] gi|308358120|gb|EFP46971.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu010] gi|308362046|gb|EFP50897.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu011] gi|308365724|gb|EFP54575.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis SUMu012] gi|323719353|gb|EGB28492.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis CDC1551A] gi|326903671|gb|EGE50604.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis W-148] gi|328458642|gb|AEB04065.1| 50S ribosomal protein L28 rpmB2 [Mycobacterium tuberculosis KZN 4207] Length = 78 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 38/63 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + GN VSH++ ++RRR+ PN+ + T ++ +LR+S ++ ++ Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|260887368|ref|ZP_05898631.1| ribosomal protein L28 [Selenomonas sputigena ATCC 35185] gi|330838657|ref|YP_004413237.1| ribosomal protein L28 [Selenomonas sputigena ATCC 35185] gi|260862906|gb|EEX77406.1| ribosomal protein L28 [Selenomonas sputigena ATCC 35185] gi|329746421|gb|AEB99777.1| ribosomal protein L28 [Selenomonas sputigena ATCC 35185] Length = 63 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K MSG VSH++ KT+R++ PN+ R+ I + + + LRS Sbjct: 1 MASVCEICAKGEMSGMNVSHSHLKTKRKWKPNIQRVRAIVNGETKHV--NVCTRCLRS 56 >gi|227494672|ref|ZP_03924988.1| 50S ribosomal protein L28 [Actinomyces coleocanis DSM 15436] gi|226831854|gb|EEH64237.1| 50S ribosomal protein L28 [Actinomyces coleocanis DSM 15436] Length = 63 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C++ K G VSH++ +T RR+ PN+ RI I +L + ++S Sbjct: 1 MASKCDVCGKGPGFGKSVSHSHVRTNRRWNPNIQRIRAIVK--GAPKRLNVCTTCIKS 56 >gi|161702940|ref|NP_926784.2| 50S ribosomal protein L28 [Gloeobacter violaceus PCC 7421] gi|67461494|sp|Q7NEP1|RL28_GLOVI RecName: Full=50S ribosomal protein L28 Length = 81 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C LT K + VS ++ + +R + NL + D +L++S A++++E Sbjct: 1 MSRKCMLTGKKANNAYSVSFSHRRNKRLQMANLQWKRIWDDQQGCFVRLKLSTKAIKTLE 60 Query: 61 RQ 62 + Sbjct: 61 HR 62 >gi|148654768|ref|YP_001274973.1| 50S ribosomal protein L28 [Roseiflexus sp. RS-1] gi|148566878|gb|ABQ89023.1| ribosomal protein L28 [Roseiflexus sp. RS-1] Length = 91 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%) Query: 1 MSRVCELTKKTVMSGNKVSHANN--------KTRRRFLPNLCRITLISDIMEQKYQLRIS 52 M+R C+LT K V G + H + KT R F PN+ R T+ + + L +S Sbjct: 1 MAR-CDLTGKKVAFGRNIRHKASGGWARRAPKTNRTFRPNVHRHTIYVPEIGRSITLNLS 59 Query: 53 KCALRSVERQGGLDRFLSNSKKENLSARM 81 ALR++ ++G ++ + + LS + Sbjct: 60 TKALRTINKKG----LIAAVRDQGLSVKA 84 >gi|34556763|ref|NP_906578.1| 50S ribosomal protein L28 [Wolinella succinogenes DSM 1740] gi|67461486|sp|Q7MAD1|RL28_WOLSU RecName: Full=50S ribosomal protein L28 gi|34482477|emb|CAE09478.1| 50S RIBOSOMAL PROTEIN L28 [Wolinella succinogenes] Length = 62 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C T K M GN VSHANNKT++R LPNL + + + +LR++ LR+++ Sbjct: 1 MARKCFFTGKGPMVGNNVSHANNKTKKRSLPNLRTVRVKLED-GTTVKLRVAASTLRTMK 59 Query: 61 RQ 62 ++ Sbjct: 60 KR 61 >gi|297617074|ref|YP_003702233.1| ribosomal protein L28 [Syntrophothermus lipocalidus DSM 12680] gi|297144911|gb|ADI01668.1| ribosomal protein L28 [Syntrophothermus lipocalidus DSM 12680] Length = 62 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K ++ G + SH++ +T R++ PN+ ++ ++ D Q + + LRS Sbjct: 1 MAK-CEICGKGIVFGKQYSHSHIRTNRKWKPNVQKVRILVD--GQPQKTYVCTRCLRS 55 >gi|152990068|ref|YP_001355790.1| 50S ribosomal protein L28 [Nitratiruptor sp. SB155-2] gi|166226590|sp|A6Q1S4|RL28_NITSB RecName: Full=50S ribosomal protein L28 gi|151421929|dbj|BAF69433.1| 50S ribosomal protein L28 [Nitratiruptor sp. SB155-2] Length = 67 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C++T K ++G+ VSHANNKT+RRFLPN+ + + K ++++S LR ++ Sbjct: 1 MSKKCQVTGKKPITGHNVSHANNKTKRRFLPNIRTVRVTLPD-GTKKKIKVSAKGLRILK 59 Query: 61 RQ 62 ++ Sbjct: 60 KK 61 >gi|291286451|ref|YP_003503267.1| 50S ribosomal protein L28 [Denitrovibrio acetiphilus DSM 12809] gi|290883611|gb|ADD67311.1| ribosomal protein L28 [Denitrovibrio acetiphilus DSM 12809] Length = 62 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE+ K M G+++SHA+N +RR F PN+ RI +I + ++ ++ Sbjct: 1 MAKRCEICGKGPMFGHQISHAHNVSRRVFYPNVHRIRVI--ESGAVVRKKVCTKCMK 55 >gi|327399092|ref|YP_004339961.1| 50S ribosomal protein L28 [Hippea maritima DSM 10411] gi|327181721|gb|AEA33902.1| 50S ribosomal protein L28 [Hippea maritima DSM 10411] Length = 64 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R CE+ K G KVSH++ +T++++ PN+ R+ + D + ++ + L+ Sbjct: 1 MARRCEICGKRAQVGYKVSHSHIRTKKKWNPNIQRVKVYVD--GKVKRMNVCTQCLK 55 >gi|291533320|emb|CBL06433.1| LSU ribosomal protein L28P [Megamonas hypermegale ART12/1] Length = 62 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K +G VSH++ KT+R + PN+ R+ + D + ++ + +RS Sbjct: 1 MANVCEICAKGERAGMNVSHSHLKTKRTWKPNIQRVRAVVD--GEVKRVNVCTSCMRS 56 >gi|262341283|ref|YP_003284138.1| 50S ribosomal protein L28 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272620|gb|ACY40528.1| 50S ribosomal protein L28 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 76 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VCELT K M GNKVSHANNK +RRF NLC+ + ++ L+I A++ + Sbjct: 1 MSKVCELTGKKAMIGNKVSHANNKKKRRFNINLCKKRFFFNKRKKWITLKICAYAVKIIN 60 Query: 61 RQG 63 + G Sbjct: 61 KIG 63 >gi|307297644|ref|ZP_07577450.1| ribosomal protein L28 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916904|gb|EFN47286.1| ribosomal protein L28 [Thermotogales bacterium mesG1.Ag.4.2] Length = 63 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VCE+ K+ +GN VSH+N K +R + PN+ ++ + D + ++R+ L+ Sbjct: 1 MSKVCEICGKSPTTGNMVSHSNKKAKRWWKPNVHKVRAVVD--GEVKRIRVCAKCLK 55 >gi|19704769|ref|NP_604331.1| 50S ribosomal protein L28P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|254303981|ref|ZP_04971339.1| ribosomal protein L28 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|296327748|ref|ZP_06870287.1| 50S ribosomal protein L28 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22096047|sp|Q8RDR9|RL28_FUSNN RecName: Full=50S ribosomal protein L28 gi|19715099|gb|AAL95630.1| LSU ribosomal protein L28P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|148324173|gb|EDK89423.1| ribosomal protein L28 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|296155095|gb|EFG95873.1| 50S ribosomal protein L28 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 85 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL TL+ + ++++ L++++ Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLVVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LS R+ Sbjct: 60 SEVEVMRILKANIATLSERLLK 81 >gi|257458127|ref|ZP_05623281.1| ribosomal protein L28 [Treponema vincentii ATCC 35580] gi|257444421|gb|EEV19510.1| ribosomal protein L28 [Treponema vincentii ATCC 35580] Length = 63 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K MSGN VS + N RR + PNL + +I + L++ L+S Sbjct: 1 MARRCDICGKGPMSGNTVSKSMNHQRRVWRPNLIDVKT--EIDGRTLTLKLCSRCLKS 56 >gi|237739403|ref|ZP_04569884.1| LSU ribosomal protein L28P [Fusobacterium sp. 2_1_31] gi|262066263|ref|ZP_06025875.1| 50S ribosomal protein L28 [Fusobacterium periodonticum ATCC 33693] gi|294783599|ref|ZP_06748923.1| 50S ribosomal protein L28 [Fusobacterium sp. 1_1_41FAA] gi|229423011|gb|EEO38058.1| LSU ribosomal protein L28P [Fusobacterium sp. 2_1_31] gi|291380033|gb|EFE87551.1| 50S ribosomal protein L28 [Fusobacterium periodonticum ATCC 33693] gi|294480477|gb|EFG28254.1| 50S ribosomal protein L28 [Fusobacterium sp. 1_1_41FAA] Length = 85 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL TL + ++++ L++++ Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLNVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LS R+ Sbjct: 60 SEVEVMRILKANIATLSERLLK 81 >gi|35214411|dbj|BAC91779.1| 50S ribosomal protein L28 [Gloeobacter violaceus PCC 7421] Length = 84 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C LT K + VS ++ + +R + NL + D +L++S A++++E Sbjct: 4 MSRKCMLTGKKANNAYSVSFSHRRNKRLQMANLQWKRIWDDQQGCFVRLKLSTKAIKTLE 63 Query: 61 RQ 62 + Sbjct: 64 HR 65 >gi|15839485|ref|NP_334522.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|31791283|ref|NP_853776.1| 50S ribosomal protein L28 [Mycobacterium bovis AF2122/97] gi|57116690|ref|YP_177691.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Rv] gi|121636018|ref|YP_976241.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659868|ref|YP_001281391.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148821297|ref|YP_001286051.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis F11] gi|167968262|ref|ZP_02550539.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|215406093|ref|ZP_03418274.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 02_1987] gi|215413961|ref|ZP_03422623.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 94_M4241A] gi|215425303|ref|ZP_03423222.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T92] gi|215433022|ref|ZP_03430941.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis EAS054] gi|215448381|ref|ZP_03435133.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|218755832|ref|ZP_03534628.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis GM 1503] gi|219555890|ref|ZP_03534966.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T17] gi|224988491|ref|YP_002643178.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797023|ref|YP_003030024.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis KZN 1435] gi|254233499|ref|ZP_04926825.1| 50S ribosomal protein L28-1 rpmB1 [Mycobacterium tuberculosis C] gi|254366561|ref|ZP_04982605.1| 50S ribosomal protein L28-1 rpmB1 [Mycobacterium tuberculosis str. Haarlem] gi|254549039|ref|ZP_05139486.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184961|ref|ZP_05762435.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis CPHL_A] gi|260199100|ref|ZP_05766591.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis T46] gi|260203249|ref|ZP_05770740.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis K85] gi|289441474|ref|ZP_06431218.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis T46] gi|289445635|ref|ZP_06435379.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis CPHL_A] gi|289552356|ref|ZP_06441566.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis KZN 605] gi|289567997|ref|ZP_06448224.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis T17] gi|289572685|ref|ZP_06452912.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis K85] gi|289747872|ref|ZP_06507250.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis 02_1987] gi|289748575|ref|ZP_06507953.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis T92] gi|289756167|ref|ZP_06515545.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis EAS054] gi|289760205|ref|ZP_06519583.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|289764222|ref|ZP_06523600.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis GM 1503] gi|294992949|ref|ZP_06798640.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis 210] gi|297632578|ref|ZP_06950358.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN 4207] gi|297729552|ref|ZP_06958670.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN R506] gi|298527496|ref|ZP_07014905.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis 94_M4241A] gi|306774187|ref|ZP_07412524.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu001] gi|306778932|ref|ZP_07417269.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu002] gi|306782721|ref|ZP_07421043.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu003] gi|306787088|ref|ZP_07425410.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu004] gi|306791645|ref|ZP_07429947.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu005] gi|306795707|ref|ZP_07434009.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu006] gi|306801682|ref|ZP_07438350.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu008] gi|306805894|ref|ZP_07442562.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu007] gi|306970290|ref|ZP_07482951.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu009] gi|306974523|ref|ZP_07487184.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu010] gi|307082231|ref|ZP_07491401.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu011] gi|307082574|ref|ZP_07491687.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu012] gi|313656879|ref|ZP_07813759.1| 50S ribosomal protein L28 [Mycobacterium tuberculosis KZN V2475] gi|61232234|sp|P0A5V6|RL28A_MYCTU RecName: Full=50S ribosomal protein L28-1 gi|61232241|sp|P0A5V7|RL28A_MYCBO RecName: Full=50S ribosomal protein L28-1 gi|13879592|gb|AAK44336.1| ribosomal protein L28 [Mycobacterium tuberculosis CDC1551] gi|31616868|emb|CAD92970.1| PROBABLE 50S RIBOSOMAL PROTEIN L28-1 RPMB1 [Mycobacterium bovis AF2122/97] gi|41352731|emb|CAE55241.1| PROBABLE 50S RIBOSOMAL PROTEIN L28-1 RPMB1 [Mycobacterium tuberculosis H37Rv] gi|121491665|emb|CAL70123.1| Probable 50s ribosomal protein L28-1 rpmB1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603292|gb|EAY61567.1| 50S ribosomal protein L28-1 rpmB1 [Mycobacterium tuberculosis C] gi|134152073|gb|EBA44118.1| 50S ribosomal protein L28-1 rpmB1 [Mycobacterium tuberculosis str. Haarlem] gi|148504020|gb|ABQ71829.1| ribosomal protein L28 [Mycobacterium tuberculosis H37Ra] gi|148719824|gb|ABR04449.1| 50S ribosomal protein L28-1 rpmB1 [Mycobacterium tuberculosis F11] gi|224771604|dbj|BAH24410.1| 50S ribosomal protein L28 [Mycobacterium bovis BCG str. Tokyo 172] gi|253318526|gb|ACT23129.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis KZN 1435] gi|289414393|gb|EFD11633.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis T46] gi|289418593|gb|EFD15794.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis CPHL_A] gi|289436988|gb|EFD19481.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis KZN 605] gi|289537116|gb|EFD41694.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis K85] gi|289541750|gb|EFD45399.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis T17] gi|289688400|gb|EFD55888.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis 02_1987] gi|289689162|gb|EFD56591.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis T92] gi|289696754|gb|EFD64183.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis EAS054] gi|289711728|gb|EFD75744.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis GM 1503] gi|289715769|gb|EFD79781.1| ribosomal protein L28 [Mycobacterium tuberculosis T85] gi|298497290|gb|EFI32584.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis 94_M4241A] gi|308217225|gb|EFO76624.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu001] gi|308328084|gb|EFP16935.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu002] gi|308332428|gb|EFP21279.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu003] gi|308336222|gb|EFP25073.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu004] gi|308339823|gb|EFP28674.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu005] gi|308343817|gb|EFP32668.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu006] gi|308347601|gb|EFP36452.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu007] gi|308351543|gb|EFP40394.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu008] gi|308352227|gb|EFP41078.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu009] gi|308356161|gb|EFP45012.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu010] gi|308360132|gb|EFP48983.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu011] gi|308367696|gb|EFP56547.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis SUMu012] gi|326905864|gb|EGE52797.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis W-148] gi|328456812|gb|AEB02235.1| 50S ribosomal protein rpmB1 [Mycobacterium tuberculosis KZN 4207] Length = 94 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 35/59 (59%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 MS C++T +TV G VSH++ +TRRR+ PN+ +++ ++R+S ++ + Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVI 59 >gi|152993734|ref|YP_001359455.1| 50S ribosomal protein L28 [Sulfurovum sp. NBC37-1] gi|166228165|sp|A6QC89|RL28_SULNB RecName: Full=50S ribosomal protein L28 gi|151425595|dbj|BAF73098.1| 50S ribosomal protein L28 [Sulfurovum sp. NBC37-1] Length = 69 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 MSR C ++ K + GN VSHANNKT+RR LPNL + + + +++++ LR++ Sbjct: 1 MSRRCSVSGKGPLVGNNVSHANNKTKRRQLPNLRSVKITMED-GTTKRVKVAASTLRTM 58 >gi|295696048|ref|YP_003589286.1| ribosomal protein L28 [Bacillus tusciae DSM 2912] gi|295411650|gb|ADG06142.1| ribosomal protein L28 [Bacillus tusciae DSM 2912] Length = 63 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE+ + +G+ VSH++ T+RR++PN+ + + +++ ++R+ L+ Sbjct: 1 MAKRCEICGRGPATGHAVSHSHILTKRRWMPNIHK--IRAEVGGSVRRIRVCARCLK 55 >gi|157738019|ref|YP_001490703.1| 50S ribosomal protein L28 [Arcobacter butzleri RM4018] gi|315636360|ref|ZP_07891609.1| 50S ribosomal protein L28 [Arcobacter butzleri JV22] gi|166987908|sp|A8EVR0|RL28_ARCB4 RecName: Full=50S ribosomal protein L28 gi|157699873|gb|ABV68033.1| 50S ribosomal protein L28 [Arcobacter butzleri RM4018] gi|315479339|gb|EFU70023.1| 50S ribosomal protein L28 [Arcobacter butzleri JV22] Length = 62 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C ++ K M GN VSHA N+TRRRFLPN+ + + + +LRIS LR+++ Sbjct: 1 MSRKCAISGKGPMVGNNVSHAKNRTRRRFLPNIRTVRVTLED-GTTTKLRISAKELRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KH 61 >gi|322379605|ref|ZP_08053942.1| 50S ribosomal protein L28 [Helicobacter suis HS1] gi|322380994|ref|ZP_08055051.1| 50S ribosomal protein L28 [Helicobacter suis HS5] gi|321146579|gb|EFX41422.1| 50S ribosomal protein L28 [Helicobacter suis HS5] gi|321147999|gb|EFX42562.1| 50S ribosomal protein L28 [Helicobacter suis HS1] Length = 62 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+L+ K M GN+VSHANNKT+RR LPNL I + + K +++++ LR++ Sbjct: 1 MARRCDLSHKGPMVGNRVSHANNKTKRRLLPNLHTIHITLED-GTKQRIKVATSTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|269218659|ref|ZP_06162513.1| conserved domain protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269211770|gb|EEZ78110.1| conserved domain protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 97 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 + VCE+ K G +VSH++ +T RR+ PN+ R+ + + + ++ + L+ Sbjct: 34 ASVCEICGKHPSFGKRVSHSHVRTSRRWNPNIQRVRALVN--GARKRVNVCTSCLK 87 >gi|224541308|ref|ZP_03681847.1| hypothetical protein CATMIT_00468 [Catenibacterium mitsuokai DSM 15897] gi|224525745|gb|EEF94850.1| hypothetical protein CATMIT_00468 [Catenibacterium mitsuokai DSM 15897] Length = 65 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+L+ K MSGN SHA N TRR++ NL + T+I D + ++R+S LR++ Sbjct: 5 MSRKCQLSGKGPMSGNNRSHALNATRRKWNVNLQKATVIID--GKPTKVRVSARQLRTLR 62 Query: 61 R 61 + Sbjct: 63 K 63 >gi|224436839|ref|ZP_03657828.1| 50S ribosomal protein L28 [Helicobacter cinaedi CCUG 18818] gi|313143318|ref|ZP_07805511.1| 50S ribosomal protein L28 [Helicobacter cinaedi CCUG 18818] gi|313128349|gb|EFR45966.1| 50S ribosomal protein L28 [Helicobacter cinaedi CCUG 18818] Length = 62 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C T K M GN VSHANNKT++R LPNL I L + +++++ LR+++ Sbjct: 1 MARKCFFTGKGPMVGNNVSHANNKTKKRSLPNLRSIRLKLED-GSSIRVKVAASTLRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KH 61 >gi|330318732|gb|AEC11026.1| 50S ribosomal protein L28 [Camellia sinensis] Length = 74 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGG 64 C T K NKVSH+N+KT++ NL + + ++ +LR+S A++++E+ G Sbjct: 1 CPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNG- 59 Query: 65 LDRFLSNS 72 LD + Sbjct: 60 LDAVAKKA 67 >gi|203284266|ref|YP_002222006.1| 50S ribosomal protein L28 [Borrelia duttonii Ly] gi|203287803|ref|YP_002222818.1| 50S ribosomal protein L28 [Borrelia recurrentis A1] gi|226738036|sp|B5RLT4|RL28_BORDL RecName: Full=50S ribosomal protein L28 gi|226738039|sp|B5RRG3|RL28_BORRA RecName: Full=50S ribosomal protein L28 gi|201083709|gb|ACH93300.1| 50S ribosomal protein L28 [Borrelia duttonii Ly] gi|201085023|gb|ACH94597.1| 50S ribosomal protein L28 [Borrelia recurrentis A1] Length = 92 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MGRECEITGKRTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPELGKNV 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 ++IS LRS+ + G L+ FL + K+ Sbjct: 61 SIKISASTLRSISKVG-LNVFLKKNNKK 87 >gi|328722845|ref|XP_003247689.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Acyrthosiphon pisum] Length = 266 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 +GNK ++ + P L + + S+I+ + +++ AL + + GLD +L + Sbjct: 97 QNGNKY---KSRVPHFWTPTLKKSVVYSEILNEYVSTTVTEKALDLINKNYGLDHYLLKT 153 Query: 73 KKENLSARM-RTLRSQILKKMSEK 95 +L + ++ +L + +K Sbjct: 154 AACDLRTTLSLKIKRHLLMALRDK 177 >gi|58267722|ref|XP_571017.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134112281|ref|XP_775116.1| hypothetical protein CNBE3900 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257768|gb|EAL20469.1| hypothetical protein CNBE3900 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227251|gb|AAW43710.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21] Length = 213 Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 14/97 (14%) Query: 12 VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISK--------------CALR 57 SGN + KT+R F PNL R+ ++ + +K +R Sbjct: 74 TRSGNNKPKSLQKTKRTFQPNLTRVDWPVTVLGGPVPIDRTKEQSLPKLEGILMQVRKIR 133 Query: 58 SVERQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 VE+ GG++ L + + ++L+ +LR+Q+ + + E Sbjct: 134 DVEKAGGIEGLLLSRRSKDLTPYGASLRAQLFESLHE 170 >gi|308272038|emb|CBX28646.1| 50S ribosomal protein L28 [uncultured Desulfobacterium sp.] Length = 63 Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR+CE+ K M G VSHA+N T RRF PNL + I ++ + ++S Sbjct: 1 MSRMCEICGKKPMVGKNVSHAHNVTCRRFNPNLQNVRAI--RNGMVKKIVVCTSCIKS 56 >gi|158312983|ref|YP_001505491.1| 50S ribosomal protein L28 [Frankia sp. EAN1pec] gi|226694807|sp|A8L585|RL28_FRASN RecName: Full=50S ribosomal protein L28 gi|158108388|gb|ABW10585.1| ribosomal protein L28 [Frankia sp. EAN1pec] Length = 62 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS VC++ K G VSH++ +TRRR+ PN+ + + + +L + L+ Sbjct: 1 MSSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVRAMVGRTPR--RLNVCTSCLK 55 >gi|197260788|gb|ACH56894.1| mitochondrial ribosomal protein L28 [Simulium vittatum] Length = 282 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Query: 7 LTKKTVMSG-NKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGL 65 + ++ G K + + ++P L R + S+++ + + ++ + + G Sbjct: 87 WGGEGIVKGFQKRTPYKRRVPHFWVPVLRRSVVYSEVLNEYLSVIVTDRTIDLIHECHGF 146 Query: 66 DRFLSNSKKENLSAR-MRTLRSQILKKMSE 94 D +L + +L +R ++ ++L + + Sbjct: 147 DHYLLKTPACDLRSRLALQIKRRVLANLQD 176 >gi|152965335|ref|YP_001361119.1| 50S ribosomal protein L28 [Kineococcus radiotolerans SRS30216] gi|151359852|gb|ABS02855.1| ribosomal protein L28 [Kineococcus radiotolerans SRS30216] Length = 61 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K G VSH++ +T R +LPN+ RI + +L + L+ Sbjct: 1 MAATCDVCAKGPGFGKSVSHSHRRTNRMWLPNIQRIRATVN--GSPKRLNVCTSCLK 55 >gi|296273765|ref|YP_003656396.1| 50S ribosomal protein L28 [Arcobacter nitrofigilis DSM 7299] gi|296097939|gb|ADG93889.1| ribosomal protein L28 [Arcobacter nitrofigilis DSM 7299] Length = 62 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C ++ K MSGN VSHA N+T+RRFLPNL + + D +++IS LR+++ Sbjct: 1 MSRRCAISGKGPMSGNNVSHAKNRTKRRFLPNLRTVRVTLDD-GTTQKIKISAKELRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KN 61 >gi|271969204|ref|YP_003343400.1| 50S ribosomal protein L28P [Streptosporangium roseum DSM 43021] gi|270512379|gb|ACZ90657.1| LSU ribosomal protein L28P [Streptosporangium roseum DSM 43021] Length = 61 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K GN VSH++ +TRRR+ PN+ + + + + +L + ++ Sbjct: 1 MASVCDVCAKKPTFGNNVSHSHRRTRRRWNPNIQPVRAVVNGTPK--RLNVCTSCIK 55 >gi|195437414|ref|XP_002066635.1| GK24462 [Drosophila willistoni] gi|194162720|gb|EDW77621.1| GK24462 [Drosophila willistoni] Length = 302 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 8/93 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + H +T+RR ++P L R + S ++ + + +++ L + Sbjct: 87 WGGEAVIKGFQKRH---QTKRRVPHFWVPQLKRSVVHSQVLNEYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 G D +L + +L SA ++ Q+L+ + + Sbjct: 144 HGFDHYLLKNLACDLRSALALKMKRQVLQALQQ 176 >gi|68072487|ref|XP_678157.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56498535|emb|CAH93617.1| conserved hypothetical protein [Plasmodium berghei] Length = 280 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + PN+ + ++S+I+ +RI+ AL +++ GG D ++ + E Sbjct: 60 KVSYSLKKTRIKIKPNVFKKHIVSNILNTIIPSVRITT-ALHAIDDAGGFDNYILRTPPE 118 Query: 76 NL-SARMRTLRSQI 88 L S LR+ + Sbjct: 119 ELRSNFGEKLRNVM 132 >gi|114566296|ref|YP_753450.1| 50S ribosomal protein L28 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318621|sp|Q0AYX5|RL28_SYNWW RecName: Full=50S ribosomal protein L28 gi|114337231|gb|ABI68079.1| LSU ribosomal protein L28P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 62 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V G K SH++ +T R++ PN+ + I D + ++ + LRS Sbjct: 1 MAK-CDICGKGVGFGKKYSHSHIRTNRQWKPNIQPVKAIVDGTPK--KIYVCTRCLRS 55 >gi|197123014|ref|YP_002134965.1| 50S ribosomal protein L28 [Anaeromyxobacter sp. K] gi|220917804|ref|YP_002493108.1| ribosomal protein L28 [Anaeromyxobacter dehalogenans 2CP-1] gi|226738026|sp|B4UGY2|RL28_ANASK RecName: Full=50S ribosomal protein L28 gi|254801495|sp|B8JDJ3|RL28_ANAD2 RecName: Full=50S ribosomal protein L28 gi|196172863|gb|ACG73836.1| ribosomal protein L28 [Anaeromyxobacter sp. K] gi|219955658|gb|ACL66042.1| ribosomal protein L28 [Anaeromyxobacter dehalogenans 2CP-1] Length = 73 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R CE+ K + GN VSHANNK + R LPNL + + + + L+ Sbjct: 1 MARRCEICGKGPLVGNTVSHANNKNKTRSLPNLRSVRANLAGEIRHIR--VCTRCLK 55 >gi|256372290|ref|YP_003110114.1| ribosomal protein L28 [Acidimicrobium ferrooxidans DSM 10331] gi|256008874|gb|ACU54441.1| ribosomal protein L28 [Acidimicrobium ferrooxidans DSM 10331] Length = 62 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VCE+ K G K+SH++ +T+RRFLPN+ R+ ++ + + + LR Sbjct: 1 MASVCEICGKGPRVGMKLSHSHRRTKRRFLPNVQRVRVLEGATTR--RRFVCTSCLR 55 >gi|156743829|ref|YP_001433958.1| 50S ribosomal protein L28 [Roseiflexus castenholzii DSM 13941] gi|156235157|gb|ABU59940.1| ribosomal protein L28 [Roseiflexus castenholzii DSM 13941] Length = 91 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 13/89 (14%) Query: 1 MSRVCELTKKTVMSGNKVSHANN--------KTRRRFLPNLCRITLISDIMEQKYQLRIS 52 M++ C+LT K V G + H + KT R F PN+ R T+ + Q L +S Sbjct: 1 MAK-CDLTGKKVAFGRNIRHKASGGWARRAPKTNRTFRPNVHRHTIYVPEIGQSVTLNLS 59 Query: 53 KCALRSVERQGGLDRFLSNSKKENLSARM 81 ALR + ++G L+ + + LS Sbjct: 60 TKALRIINKKG----LLAAVRDQRLSVEA 84 >gi|237745230|ref|ZP_04575711.1| LSU ribosomal protein L28P [Fusobacterium sp. 7_1] gi|256026665|ref|ZP_05440499.1| 50S ribosomal protein L28P [Fusobacterium sp. D11] gi|260495477|ref|ZP_05815603.1| ribosomal protein L28 [Fusobacterium sp. 3_1_33] gi|289764663|ref|ZP_06524041.1| LSU ribosomal protein L28P [Fusobacterium sp. D11] gi|229432459|gb|EEO42671.1| LSU ribosomal protein L28P [Fusobacterium sp. 7_1] gi|260197014|gb|EEW94535.1| ribosomal protein L28 [Fusobacterium sp. 3_1_33] gi|289716218|gb|EFD80230.1| LSU ribosomal protein L28P [Fusobacterium sp. D11] Length = 85 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGNK+SH++ TRR + PNL TL+ + ++++ L++++ Sbjct: 2 QRCEITGTGLISGNKISHSHRLTRRVWKPNLQVTTLLVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LS R+ Sbjct: 60 SEVEVMRILKANIATLSERLLK 81 >gi|195161266|ref|XP_002021489.1| GL26538 [Drosophila persimilis] gi|198472480|ref|XP_001355947.2| GA17686 [Drosophila pseudoobscura pseudoobscura] gi|194103289|gb|EDW25332.1| GL26538 [Drosophila persimilis] gi|198139032|gb|EAL33006.2| GA17686 [Drosophila pseudoobscura pseudoobscura] Length = 301 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 8/93 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + +T+RR ++P L R + S ++ + + +++ AL + Sbjct: 87 WGGEAVIKGFQ---KRQQTKRRVPHFWVPQLRRSVVHSQVLNEYISVIVTERALEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 G D +L + +L SA L+ Q+L + Sbjct: 144 HGFDHYLLKNLACDLRSALALKLKRQLLLSLQA 176 >gi|195114360|ref|XP_002001735.1| GI15386 [Drosophila mojavensis] gi|193912310|gb|EDW11177.1| GI15386 [Drosophila mojavensis] Length = 300 Score = 65.1 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + V+ G + + T+RR ++P L R + S ++ + + +++ L + Sbjct: 87 WGGEAVIKGFQKRES---TKRRVPHFWVPTLRRSVVHSQVLNEYMSVVVTERTLEQIHEC 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMS 93 G D +L + +L SA L+ +ILK + Sbjct: 144 HGFDHYLLKNLACDLRSALALKLKRKILKSLQ 175 >gi|227548276|ref|ZP_03978325.1| 50S ribosomal protein L28 [Corynebacterium lipophiloflavum DSM 44291] gi|227079594|gb|EEI17557.1| 50S ribosomal protein L28 [Corynebacterium lipophiloflavum DSM 44291] Length = 78 Score = 65.1 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T + G VSH++ + RR+ PN+ + + L +S L+ ++ Sbjct: 1 MSAYCQVTGRQPSFGKTVSHSHRRHSRRWNPNVQKKRFYLPSEGRTITLNVSTKGLKIID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|169824369|ref|YP_001691980.1| 50S ribosomal protein L28 [Finegoldia magna ATCC 29328] gi|297588347|ref|ZP_06946990.1| 50S ribosomal protein L28 [Finegoldia magna ATCC 53516] gi|302380685|ref|ZP_07269150.1| ribosomal protein L28 [Finegoldia magna ACS-171-V-Col3] gi|303233883|ref|ZP_07320532.1| ribosomal protein L28 [Finegoldia magna BVS033A4] gi|254801361|sp|B0S150|RL28_FINM2 RecName: Full=50S ribosomal protein L28 gi|167831174|dbj|BAG08090.1| 50S ribosomal protein L28 [Finegoldia magna ATCC 29328] gi|297573720|gb|EFH92441.1| 50S ribosomal protein L28 [Finegoldia magna ATCC 53516] gi|302311628|gb|EFK93644.1| ribosomal protein L28 [Finegoldia magna ACS-171-V-Col3] gi|302494808|gb|EFL54565.1| ribosomal protein L28 [Finegoldia magna BVS033A4] Length = 71 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ K+ GN S + + R + PN+ ++ + D + ++ + LRS Sbjct: 1 MSKKCEICGKSRTFGNNRSFSLRSSNRSWAPNIRKVRALVD--GKPKRINVCTRCLRS 56 >gi|1903348|gb|AAB70428.1| Strong similarity to 50S ribosomal protein L28 (gb|X68078) [Arabidopsis thaliana] Length = 81 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 SR+C T K NKVS +N+KT++ NL + + ++ LR+S AL+++E+ Sbjct: 5 SRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVILRLSTKALKTIEK 64 Query: 62 QG 63 G Sbjct: 65 NG 66 >gi|332297429|ref|YP_004439351.1| 50S ribosomal protein L28 [Treponema brennaborense DSM 12168] gi|332180532|gb|AEE16220.1| 50S ribosomal protein L28 [Treponema brennaborense DSM 12168] Length = 63 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C++ K +SGNKVS + N TRR + PN+ + + ++I +++ LRS Sbjct: 1 MSRRCDICGKGSLSGNKVSKSYNHTRRTWKPNI--VEVKTEIGGTAMTIKMCTRCLRS 56 >gi|294791989|ref|ZP_06757137.1| ribosomal protein L28 [Veillonella sp. 6_1_27] gi|294793853|ref|ZP_06758990.1| ribosomal protein L28 [Veillonella sp. 3_1_44] gi|313893258|ref|ZP_07826833.1| ribosomal protein L28 [Veillonella sp. oral taxon 158 str. F0412] gi|294455423|gb|EFG23795.1| ribosomal protein L28 [Veillonella sp. 3_1_44] gi|294457219|gb|EFG25581.1| ribosomal protein L28 [Veillonella sp. 6_1_27] gi|313442154|gb|EFR60571.1| ribosomal protein L28 [Veillonella sp. oral taxon 158 str. F0412] Length = 62 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ +CE+ K+ SG VSH++ +TR+ + PN+ R+ + D ++ + LRS Sbjct: 1 MANLCEVCGKSTSSGMNVSHSHIRTRKTWKPNIQRVRAVVD--GATKKVNVCTRCLRS 56 >gi|237742534|ref|ZP_04573015.1| LSU ribosomal protein L28P [Fusobacterium sp. 4_1_13] gi|256845871|ref|ZP_05551329.1| ribosomal protein L28 [Fusobacterium sp. 3_1_36A2] gi|229430182|gb|EEO40394.1| LSU ribosomal protein L28P [Fusobacterium sp. 4_1_13] gi|256719430|gb|EEU32985.1| ribosomal protein L28 [Fusobacterium sp. 3_1_36A2] Length = 85 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL TL+ + ++++ L++++ Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLVVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 + + + LS R+ Sbjct: 60 SETEVMRILKANIATLSERLLK 81 >gi|86742289|ref|YP_482689.1| 50S ribosomal protein L28 [Frankia sp. CcI3] gi|123737112|sp|Q2J6Y2|RL28_FRASC RecName: Full=50S ribosomal protein L28 gi|86569151|gb|ABD12960.1| LSU ribosomal protein L28P [Frankia sp. CcI3] Length = 62 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS VC++ K G VSH++ +TRRR+ PN+ + + + +L + ++ Sbjct: 1 MSSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVRTVVGGTPK--RLNVCASCIK 55 >gi|187918220|ref|YP_001883783.1| 50S ribosomal protein L28 [Borrelia hermsii DAH] gi|226738037|sp|B2S057|RL28_BORHD RecName: Full=50S ribosomal protein L28 gi|119861068|gb|AAX16863.1| LSU ribosomal protein L28P [Borrelia hermsii DAH] Length = 92 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M R CE+T K M GN V H KT+R F NL + + Sbjct: 1 MGRECEITGKRTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPELGKSV 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNS 72 ++IS ALRS+ + G L FL + Sbjct: 61 NIKISASALRSISKVG-LSVFLKKN 84 >gi|328955655|ref|YP_004372988.1| LSU ribosomal protein L28P [Coriobacterium glomerans PW2] gi|328455979|gb|AEB07173.1| LSU ribosomal protein L28P [Coriobacterium glomerans PW2] Length = 62 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VCE+ K ++G +SH++ T R+F PN+ R+ ++ D + ++ + L+S Sbjct: 1 MSKVCEICGKHPVAGRSISHSHRVTNRKFRPNIQRVHVVMDGHRR--KMNVCTSCLKS 56 >gi|325114357|emb|CBZ49914.1| 50s ribosomal protein L28, related [Neospora caninum Liverpool] Length = 271 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C L K N SH+ T + NL L +LR+S +R+++ Sbjct: 144 ARRCMLLGKMDNTKANNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 RQG---GLDRFLSNSKKEN 76 + G D+F N KK+ Sbjct: 204 KYGLQRAADKFGLNLKKKK 222 >gi|238019124|ref|ZP_04599550.1| hypothetical protein VEIDISOL_00986 [Veillonella dispar ATCC 17748] gi|269798118|ref|YP_003312018.1| ribosomal protein L28 [Veillonella parvula DSM 2008] gi|237863823|gb|EEP65113.1| hypothetical protein VEIDISOL_00986 [Veillonella dispar ATCC 17748] gi|269094747|gb|ACZ24738.1| ribosomal protein L28 [Veillonella parvula DSM 2008] Length = 62 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ +CE+ K+ SG VSH++ +TR+ + PN+ R+ + D ++ + LRS Sbjct: 1 MANLCEVCGKSTSSGMNVSHSHIRTRKTWKPNIQRVRAVVD--GATKKVNVCTRCLRS 56 >gi|284047836|ref|YP_003398175.1| ribosomal protein L28 [Acidaminococcus fermentans DSM 20731] gi|283952057|gb|ADB46860.1| ribosomal protein L28 [Acidaminococcus fermentans DSM 20731] Length = 63 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ +CE+ K +SGN VSH+N +R + PN+ ++ + D + + LRS Sbjct: 1 MACICEICNKGELSGNNVSHSNRHVKRSWKPNVQKVKAVVDGEVKSI--NVCTRCLRS 56 >gi|289643148|ref|ZP_06475277.1| ribosomal protein L28 [Frankia symbiont of Datisca glomerata] gi|289507040|gb|EFD28010.1| ribosomal protein L28 [Frankia symbiont of Datisca glomerata] Length = 62 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS VC++ K G VSH++ +TRRR+ PN+ + + + +L + ++ Sbjct: 1 MSSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVHALVGKTPK--RLNVCTSCIK 55 >gi|302542241|ref|ZP_07294583.1| ribosomal protein L28 [Streptomyces hygroscopicus ATCC 53653] gi|307329826|ref|ZP_07608981.1| ribosomal protein L28 [Streptomyces violaceusniger Tu 4113] gi|297156907|gb|ADI06619.1| 50S ribosomal protein L28 [Streptomyces bingchenggensis BCW-1] gi|302459859|gb|EFL22952.1| ribosomal protein L28 [Streptomyces himastatinicus ATCC 53653] gi|306884555|gb|EFN15586.1| ribosomal protein L28 [Streptomyces violaceusniger Tu 4113] Length = 61 Score = 64.7 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K GN +SH++ +TRRR+ PN+ + + + +L + ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTRRRWNPNIQTVRAVVGRTPK--RLNVCTSCIK 55 >gi|239790943|dbj|BAH72000.1| ACYPI007188 [Acyrthosiphon pisum] Length = 266 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 +GNK ++ + P L + + S+I+ + +++ AL + + GLD +L + Sbjct: 97 QNGNKY---KSRVPHFWTPTLKKSVVYSEILNEYMSTTVTEKALDLINKNYGLDHYLLKT 153 Query: 73 KKENLSARM-RTLRSQILKKMSEK 95 +L + ++ +L + +K Sbjct: 154 AACDLRTTLSLKIKRHLLMALRDK 177 >gi|237736146|ref|ZP_04566627.1| LSU ribosomal protein L28P [Fusobacterium mortiferum ATCC 9817] gi|229421699|gb|EEO36746.1| LSU ribosomal protein L28P [Fusobacterium mortiferum ATCC 9817] Length = 85 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 9/85 (10%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGN++SH++ TRR + PNL ++ + ++++ L++++ Sbjct: 2 QRCEITGVGLISGNQISHSHRLTRRVWKPNLQVTSINVN--GTPVKVKVCSRTLKTLK-- 57 Query: 63 GGLDRF----LSNSKKENLSARMRT 83 GL+ + + LS R++ Sbjct: 58 -GLNDVEVMKFLKANEATLSTRLQK 81 >gi|288923496|ref|ZP_06417615.1| ribosomal protein L28 [Frankia sp. EUN1f] gi|288345154|gb|EFC79564.1| ribosomal protein L28 [Frankia sp. EUN1f] Length = 62 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS VC++ K G VSH++ +TRRR+ PN+ + + + +L + L+ Sbjct: 1 MSSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVRAMVGRTPK--RLNVCTSCLK 55 >gi|83589771|ref|YP_429780.1| 50S ribosomal protein L28P [Moorella thermoacetica ATCC 39073] gi|123524717|sp|Q2RK02|RL28_MOOTA RecName: Full=50S ribosomal protein L28 gi|83572685|gb|ABC19237.1| LSU ribosomal protein L28P [Moorella thermoacetica ATCC 39073] Length = 62 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C + K ++GN+VSH+N KT+R + PNL R+ L+ + + + + LRS Sbjct: 1 MA-TCSICGKRAVTGNQVSHSNIKTKRTWAPNLQRVKLLVNGTPR--RAYVCTRCLRS 55 >gi|256826998|ref|YP_003150957.1| 50S ribosomal protein L28P [Cryptobacterium curtum DSM 15641] gi|256583141|gb|ACU94275.1| LSU ribosomal protein L28P [Cryptobacterium curtum DSM 15641] Length = 63 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VCE+ KT ++G VSH++ T R F PN+ R+T+ D + + + L+ Sbjct: 1 MSKVCEVCGKTPVAGRNVSHSHRVTNRMFHPNVQRVTIKDDK-GRVRKANVCTKCLK 56 >gi|121533684|ref|ZP_01665511.1| ribosomal protein L28 [Thermosinus carboxydivorans Nor1] gi|121307675|gb|EAX48590.1| ribosomal protein L28 [Thermosinus carboxydivorans Nor1] Length = 63 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ VCE+ K SG VSH+N KT+R + PN+ R+ + + + ++ LRS Sbjct: 1 MANVCEICGKGERSGFNVSHSNLKTKRTWKPNIQRVKAVVN--GEIKRINTCTRCLRS 56 >gi|193669062|ref|XP_001942935.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Acyrthosiphon pisum] Length = 266 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 +GNK ++ + P L + + S+I+ + +++ AL + + GLD +L + Sbjct: 97 QNGNKY---KSRVPHFWTPTLKKSVVYSEILNEYMSTTVTEKALDLINKNYGLDHYLLKT 153 Query: 73 KKENLSARM-RTLRSQILKKMSEK 95 +L + ++ +L + +K Sbjct: 154 AACDLRTTLSLKIKRHLLMALRDK 177 >gi|282854613|ref|ZP_06263948.1| ribosomal protein L28 [Propionibacterium acnes J139] gi|289426423|ref|ZP_06428166.1| ribosomal protein L28 [Propionibacterium acnes SK187] gi|289428748|ref|ZP_06430431.1| ribosomal protein L28 [Propionibacterium acnes J165] gi|295131016|ref|YP_003581679.1| ribosomal protein L28 [Propionibacterium acnes SK137] gi|282582195|gb|EFB87577.1| ribosomal protein L28 [Propionibacterium acnes J139] gi|289153151|gb|EFD01869.1| ribosomal protein L28 [Propionibacterium acnes SK187] gi|289158146|gb|EFD06366.1| ribosomal protein L28 [Propionibacterium acnes J165] gi|291376429|gb|ADE00284.1| ribosomal protein L28 [Propionibacterium acnes SK137] gi|313763621|gb|EFS34985.1| ribosomal protein L28 [Propionibacterium acnes HL013PA1] gi|313773558|gb|EFS39524.1| ribosomal protein L28 [Propionibacterium acnes HL074PA1] gi|313794016|gb|EFS42040.1| ribosomal protein L28 [Propionibacterium acnes HL110PA1] gi|313801402|gb|EFS42653.1| ribosomal protein L28 [Propionibacterium acnes HL110PA2] gi|313807918|gb|EFS46399.1| ribosomal protein L28 [Propionibacterium acnes HL087PA2] gi|313811611|gb|EFS49325.1| ribosomal protein L28 [Propionibacterium acnes HL083PA1] gi|313813577|gb|EFS51291.1| ribosomal protein L28 [Propionibacterium acnes HL025PA1] gi|313816801|gb|EFS54515.1| ribosomal protein L28 [Propionibacterium acnes HL059PA1] gi|313819703|gb|EFS57417.1| ribosomal protein L28 [Propionibacterium acnes HL046PA2] gi|313822190|gb|EFS59904.1| ribosomal protein L28 [Propionibacterium acnes HL036PA1] gi|313823575|gb|EFS61289.1| ribosomal protein L28 [Propionibacterium acnes HL036PA2] gi|313825900|gb|EFS63614.1| ribosomal protein L28 [Propionibacterium acnes HL063PA1] gi|313829580|gb|EFS67294.1| ribosomal protein L28 [Propionibacterium acnes HL063PA2] gi|313834964|gb|EFS72678.1| ribosomal protein L28 [Propionibacterium acnes HL056PA1] gi|313839876|gb|EFS77590.1| ribosomal protein L28 [Propionibacterium acnes HL086PA1] gi|314914625|gb|EFS78456.1| ribosomal protein L28 [Propionibacterium acnes HL005PA4] gi|314919262|gb|EFS83093.1| ribosomal protein L28 [Propionibacterium acnes HL050PA1] gi|314920827|gb|EFS84658.1| ribosomal protein L28 [Propionibacterium acnes HL050PA3] gi|314923871|gb|EFS87702.1| ribosomal protein L28 [Propionibacterium acnes HL001PA1] gi|314924584|gb|EFS88415.1| ribosomal protein L28 [Propionibacterium acnes HL036PA3] gi|314930506|gb|EFS94337.1| ribosomal protein L28 [Propionibacterium acnes HL067PA1] gi|314954336|gb|EFS98742.1| ribosomal protein L28 [Propionibacterium acnes HL027PA1] gi|314957386|gb|EFT01489.1| ribosomal protein L28 [Propionibacterium acnes HL002PA1] gi|314963630|gb|EFT07730.1| ribosomal protein L28 [Propionibacterium acnes HL082PA1] gi|314966072|gb|EFT10171.1| ribosomal protein L28 [Propionibacterium acnes HL082PA2] gi|314968538|gb|EFT12636.1| ribosomal protein L28 [Propionibacterium acnes HL037PA1] gi|314974228|gb|EFT18324.1| ribosomal protein L28 [Propionibacterium acnes HL053PA1] gi|314976661|gb|EFT20756.1| ribosomal protein L28 [Propionibacterium acnes HL045PA1] gi|314978854|gb|EFT22948.1| ribosomal protein L28 [Propionibacterium acnes HL072PA2] gi|314981844|gb|EFT25937.1| ribosomal protein L28 [Propionibacterium acnes HL110PA3] gi|314984469|gb|EFT28561.1| ribosomal protein L28 [Propionibacterium acnes HL005PA1] gi|314986487|gb|EFT30579.1| ribosomal protein L28 [Propionibacterium acnes HL005PA2] gi|314990846|gb|EFT34937.1| ribosomal protein L28 [Propionibacterium acnes HL005PA3] gi|315079484|gb|EFT51477.1| ribosomal protein L28 [Propionibacterium acnes HL053PA2] gi|315081289|gb|EFT53265.1| ribosomal protein L28 [Propionibacterium acnes HL078PA1] gi|315083487|gb|EFT55463.1| ribosomal protein L28 [Propionibacterium acnes HL027PA2] gi|315089343|gb|EFT61319.1| ribosomal protein L28 [Propionibacterium acnes HL072PA1] gi|315090769|gb|EFT62745.1| ribosomal protein L28 [Propionibacterium acnes HL110PA4] gi|315094921|gb|EFT66897.1| ribosomal protein L28 [Propionibacterium acnes HL060PA1] gi|315095368|gb|EFT67344.1| ribosomal protein L28 [Propionibacterium acnes HL038PA1] gi|315099249|gb|EFT71225.1| ribosomal protein L28 [Propionibacterium acnes HL059PA2] gi|315100517|gb|EFT72493.1| ribosomal protein L28 [Propionibacterium acnes HL046PA1] gi|315104243|gb|EFT76219.1| ribosomal protein L28 [Propionibacterium acnes HL050PA2] gi|315106712|gb|EFT78688.1| ribosomal protein L28 [Propionibacterium acnes HL030PA1] gi|315109048|gb|EFT81024.1| ribosomal protein L28 [Propionibacterium acnes HL030PA2] gi|327328050|gb|EGE69819.1| ribosomal protein L28 [Propionibacterium acnes HL103PA1] gi|327328370|gb|EGE70132.1| ribosomal protein L28 [Propionibacterium acnes HL096PA2] gi|327329763|gb|EGE71519.1| ribosomal protein L28 [Propionibacterium acnes HL096PA3] gi|327334281|gb|EGE75995.1| ribosomal protein L28 [Propionibacterium acnes HL097PA1] gi|327444154|gb|EGE90808.1| ribosomal protein L28 [Propionibacterium acnes HL043PA2] gi|327444965|gb|EGE91619.1| ribosomal protein L28 [Propionibacterium acnes HL043PA1] gi|327446449|gb|EGE93103.1| ribosomal protein L28 [Propionibacterium acnes HL013PA2] gi|327451963|gb|EGE98617.1| ribosomal protein L28 [Propionibacterium acnes HL092PA1] gi|327455000|gb|EGF01655.1| ribosomal protein L28 [Propionibacterium acnes HL087PA3] gi|327457711|gb|EGF04366.1| ribosomal protein L28 [Propionibacterium acnes HL083PA2] gi|328752204|gb|EGF65820.1| ribosomal protein L28 [Propionibacterium acnes HL020PA1] gi|328755166|gb|EGF68782.1| ribosomal protein L28 [Propionibacterium acnes HL087PA1] gi|328758055|gb|EGF71671.1| ribosomal protein L28 [Propionibacterium acnes HL025PA2] gi|328760123|gb|EGF73702.1| ribosomal protein L28 [Propionibacterium acnes HL099PA1] gi|332675895|gb|AEE72711.1| 50S ribosomal protein L28 [Propionibacterium acnes 266] Length = 61 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G+ V + KT RR+ PN+ R+ ++ ++ + L+ Sbjct: 1 MAAVCDICAKRPGFGHNVPWSKKKTNRRWSPNIQRVRVV--ENGTHKRMNVCTSCLK 55 >gi|313681501|ref|YP_004059239.1| LSU ribosomal protein l28p [Sulfuricurvum kujiense DSM 16994] gi|313154361|gb|ADR33039.1| LSU ribosomal protein L28P [Sulfuricurvum kujiense DSM 16994] Length = 62 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C ++ K MSGN VSHA N+T+RRFLPNL + + + +L+I+ LR+++ Sbjct: 1 MARKCAISGKGPMSGNNVSHAKNRTKRRFLPNLRTVRVTLED-GTTKKLKIAASELRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|251772282|gb|EES52852.1| ribosomal protein L28 [Leptospirillum ferrodiazotrophum] Length = 63 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C + KT + GN++SH++ ++R F PNL + + + Q ++R+ +RS Sbjct: 1 MAANCFVCGKTKVVGNQISHSHRVSKRVFKPNLQSVHALVE--GQPRRIRVCTRCIRS 56 >gi|15895010|ref|NP_348359.1| 50S ribosomal protein L28 [Clostridium acetobutylicum ATCC 824] gi|20139607|sp|Q97IB7|RL28_CLOAB RecName: Full=50S ribosomal protein L28 gi|15024700|gb|AAK79699.1|AE007682_9 Ribosomal protein L28 [Clostridium acetobutylicum ATCC 824] gi|325509147|gb|ADZ20783.1| Ribosomal protein L28 [Clostridium acetobutylicum EA 2018] Length = 63 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C++ K +++G + SH++ +++R +LPN+ +I + D + + LRS Sbjct: 1 MSRKCDICGKGLVAGVQYSHSHRQSKRTWLPNIRKIKAVVDGTPKTIH--VCTRCLRS 56 >gi|158320471|ref|YP_001512978.1| ribosomal protein L28 [Alkaliphilus oremlandii OhILAs] gi|166987907|sp|A8MH95|RL28_ALKOO RecName: Full=50S ribosomal protein L28 gi|158140670|gb|ABW18982.1| ribosomal protein L28 [Alkaliphilus oremlandii OhILAs] Length = 63 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVCE+ K +SGN VSH+N RR + PNL R+ I + + ++ + LRS Sbjct: 1 MARVCEVCAKGKVSGNVVSHSNRHNRRTWEPNLRRVRAIVNGTAK--RINVCTRCLRS 56 >gi|253575784|ref|ZP_04853119.1| 50S ribosomal protein L28 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844827|gb|EES72840.1| 50S ribosomal protein L28 [Paenibacillus sp. oral taxon 786 str. D14] Length = 62 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K SGN VSHANN+ RR + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCYVTGKKPGSGNHVSHANNRNRRSWGVNVQKVRILVD--GKPKRVYVSTRALKS 56 >gi|251797730|ref|YP_003012461.1| ribosomal protein L28 [Paenibacillus sp. JDR-2] gi|247545356|gb|ACT02375.1| ribosomal protein L28 [Paenibacillus sp. JDR-2] Length = 62 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C +T K+ +GN VSHANNK RR + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MSRKCFITGKSPGTGNHVSHANNKNRRSWGVNVQKVRILVD--GKPKRVYVSTRALKS 56 >gi|323705494|ref|ZP_08117069.1| ribosomal protein L28 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535396|gb|EGB25172.1| ribosomal protein L28 [Thermoanaerobacterium xylanolyticum LX-11] Length = 63 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M R CE+ KT M+G + SH++ K+ +++ PNL R+ I D +L + L+S Sbjct: 1 MMRKCEVCGKTPMAGYQYSHSHRKSIKKWQPNLKRVKAIVD--GTPVRLNVCTKCLKS 56 >gi|110005235|emb|CAK99561.1| 50s ribosomal protein l28 [Spiroplasma citri] Length = 65 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE+T K+ +SGNK SHA N T R++ NL ++ ++ D + LR++ L++++ Sbjct: 1 MARKCEITGKSALSGNKRSHALNATHRKWNVNLQKVRIVVD--GEVKTLRVATRTLKTLK 58 Query: 61 RQGGL 65 R+G + Sbjct: 59 RKGQI 63 >gi|195035203|ref|XP_001989067.1| GH10245 [Drosophila grimshawi] gi|193905067|gb|EDW03934.1| GH10245 [Drosophila grimshawi] Length = 300 Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 10 KTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFL 69 K + +V H ++P L R + S ++ + + +++ L + G D +L Sbjct: 98 KRAQTKRRVPHF-------WVPTLRRSVVHSQVLNEYMSVVVTERTLEQIHECHGFDHYL 150 Query: 70 SNSKKENL-SARMRTLRSQILKKMSE 94 + +L SA ++ ++LK + + Sbjct: 151 LKNLACDLRSALALKIKRKVLKALQQ 176 >gi|148380452|ref|YP_001254993.1| ribosomal protein L28 [Clostridium botulinum A str. ATCC 3502] gi|153932659|ref|YP_001384675.1| 50S ribosomal protein L28 [Clostridium botulinum A str. ATCC 19397] gi|153936315|ref|YP_001388196.1| 50S ribosomal protein L28 [Clostridium botulinum A str. Hall] gi|153940221|ref|YP_001391794.1| 50S ribosomal protein L28 [Clostridium botulinum F str. Langeland] gi|168180619|ref|ZP_02615283.1| ribosomal protein L28 [Clostridium botulinum NCTC 2916] gi|168182575|ref|ZP_02617239.1| 50S ribosomal protein L28 [Clostridium botulinum Bf] gi|170754391|ref|YP_001782041.1| 50S ribosomal protein L28 [Clostridium botulinum B1 str. Okra] gi|170761433|ref|YP_001787813.1| 50S ribosomal protein L28 [Clostridium botulinum A3 str. Loch Maree] gi|187778907|ref|ZP_02995380.1| hypothetical protein CLOSPO_02502 [Clostridium sporogenes ATCC 15579] gi|226949851|ref|YP_002804942.1| ribosomal protein L28 [Clostridium botulinum A2 str. Kyoto] gi|237795937|ref|YP_002863489.1| 50S ribosomal protein L28 [Clostridium botulinum Ba4 str. 657] gi|166226563|sp|A7FW64|RL28_CLOB1 RecName: Full=50S ribosomal protein L28 gi|166226564|sp|A5I4S6|RL28_CLOBH RecName: Full=50S ribosomal protein L28 gi|166226565|sp|A7GG84|RL28_CLOBL RecName: Full=50S ribosomal protein L28 gi|226738056|sp|B1IIK9|RL28_CLOBK RecName: Full=50S ribosomal protein L28 gi|226738057|sp|B1KX48|RL28_CLOBM RecName: Full=50S ribosomal protein L28 gi|254801350|sp|C1FSR8|RL28_CLOBJ RecName: Full=50S ribosomal protein L28 gi|259646729|sp|C3L0J9|RL28_CLOB6 RecName: Full=50S ribosomal protein L28 gi|148289936|emb|CAL84049.1| 50S ribosomal protein L28 [Clostridium botulinum A str. ATCC 3502] gi|152928703|gb|ABS34203.1| 50S ribosomal protein L28 [Clostridium botulinum A str. ATCC 19397] gi|152932229|gb|ABS37728.1| 50S ribosomal protein L28 [Clostridium botulinum A str. Hall] gi|152936117|gb|ABS41615.1| 50S ribosomal protein L28 [Clostridium botulinum F str. Langeland] gi|169119603|gb|ACA43439.1| 50S ribosomal protein L28 [Clostridium botulinum B1 str. Okra] gi|169408422|gb|ACA56833.1| 50S ribosomal protein L28 [Clostridium botulinum A3 str. Loch Maree] gi|182668383|gb|EDT80362.1| ribosomal protein L28 [Clostridium botulinum NCTC 2916] gi|182674187|gb|EDT86148.1| 50S ribosomal protein L28 [Clostridium botulinum Bf] gi|187772532|gb|EDU36334.1| hypothetical protein CLOSPO_02502 [Clostridium sporogenes ATCC 15579] gi|226840986|gb|ACO83652.1| ribosomal protein L28 [Clostridium botulinum A2 str. Kyoto] gi|229262855|gb|ACQ53888.1| 50S ribosomal protein L28 [Clostridium botulinum Ba4 str. 657] gi|295319820|gb|ADG00198.1| 50S ribosomal protein L28 [Clostridium botulinum F str. 230613] gi|322806765|emb|CBZ04334.1| LSU ribosomal protein L28p [Clostridium botulinum H04402 065] Length = 63 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE+ K V+ G + SH++ +++R F PN+ R+ I + + ++ + LRS Sbjct: 1 MSRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPK--RVHVCTRCLRS 56 >gi|300854453|ref|YP_003779437.1| 50S ribosomal protein L28 [Clostridium ljungdahlii DSM 13528] gi|300434568|gb|ADK14335.1| 50S ribosomal protein L28 [Clostridium ljungdahlii DSM 13528] Length = 63 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ K V+ G + SH++ +++R + PN+ ++ I + + + LRS Sbjct: 1 MSKKCEICGKGVVFGVQYSHSHRQSKRTWTPNVRKVKAIVNGTPKTIH--VCSRCLRS 56 >gi|312194933|ref|YP_004014994.1| ribosomal protein L28 [Frankia sp. EuI1c] gi|311226269|gb|ADP79124.1| ribosomal protein L28 [Frankia sp. EuI1c] Length = 62 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS VC++ K G VSH++ +TRRR+ PN+ + + + +L + ++ Sbjct: 1 MSSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVHALIGRTPK--RLNVCTSCIK 55 >gi|229918589|ref|YP_002887235.1| 50S ribosomal protein L28 [Exiguobacterium sp. AT1b] gi|259646738|sp|C4L5Y4|RL28_EXISA RecName: Full=50S ribosomal protein L28 gi|229470018|gb|ACQ71790.1| ribosomal protein L28 [Exiguobacterium sp. AT1b] Length = 62 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K+ SGN SHA NKT+R + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCYVTGKSPKSGNNRSHALNKTKRTWGVNVQKVRILVD--GKPKRVWVSARALKS 56 >gi|313836630|gb|EFS74344.1| ribosomal protein L28 [Propionibacterium acnes HL037PA2] gi|314928140|gb|EFS91971.1| ribosomal protein L28 [Propionibacterium acnes HL044PA1] gi|314972138|gb|EFT16235.1| ribosomal protein L28 [Propionibacterium acnes HL037PA3] gi|328907999|gb|EGG27759.1| ribosomal protein L28 [Propionibacterium sp. P08] Length = 61 Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K G+ V + KT RR+ PN+ R+ ++ ++ + L+ Sbjct: 1 MAAVCDICAKRPGFGHNVPWSKKKTNRRWSPNIQRVRVV--ENGTHKRMNVCASCLK 55 >gi|72161049|ref|YP_288706.1| 50S ribosomal protein L28 [Thermobifida fusca YX] gi|123630047|sp|Q47S84|RL28_THEFY RecName: Full=50S ribosomal protein L28 gi|71914781|gb|AAZ54683.1| LSU ribosomal protein L28P [Thermobifida fusca YX] Length = 62 Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+ VC++ K GN++SH++ +TRRR+ PN+ + + +L + + Sbjct: 1 MASVCDICSKGPGFGNRISHSHRRTRRRWNPNIQTVRTRVGGTPK--RLNVCTSCI---- 54 Query: 61 RQGGLDRF 68 + G +DRF Sbjct: 55 KAGKVDRF 62 >gi|261405806|ref|YP_003242047.1| 50S ribosomal protein L28 [Paenibacillus sp. Y412MC10] gi|315646184|ref|ZP_07899304.1| ribosomal protein L28 [Paenibacillus vortex V453] gi|261282269|gb|ACX64240.1| ribosomal protein L28 [Paenibacillus sp. Y412MC10] gi|315278383|gb|EFU41699.1| ribosomal protein L28 [Paenibacillus vortex V453] Length = 62 Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K SGN VSHANN +R + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCYVTGKKPSSGNHVSHANNHNKRSWGVNVQKVRILVD--GKPKRVYVSTRALKS 56 >gi|167772316|ref|ZP_02444369.1| hypothetical protein ANACOL_03693 [Anaerotruncus colihominis DSM 17241] gi|167665419|gb|EDS09549.1| hypothetical protein ANACOL_03693 [Anaerotruncus colihominis DSM 17241] Length = 71 Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V G +VSH++ ++ R + PN+ R+ + D + LRS Sbjct: 10 MAK-CDICGKGVTFGIRVSHSHRRSNRAWKPNVQRVKALVDGTPRHI--YACTRCLRS 64 >gi|290561272|gb|ADD38038.1| 39S ribosomal protein L28, mitochondrial [Lepeophtheirus salmonis] Length = 295 Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 7 LTKKTVMSGNKVSHANNKTRR-------RFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + V+ G K + P L + S ++++ ++ +++ L+ V Sbjct: 95 WGGEGVIKGLKEPEKQRHYPNPRIPQCNYWWPKLHLAVVYSRVLDKYIEMPVTRRGLKLV 154 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 + G D +L + + + + ++ +IL K+ Sbjct: 155 DMAHGFDNYLLRTPVNEIYAWTLLKIKREILLKL 188 >gi|257452933|ref|ZP_05618232.1| 50S ribosomal protein L28P [Fusobacterium sp. 3_1_5R] gi|257462528|ref|ZP_05626939.1| 50S ribosomal protein L28P [Fusobacterium sp. D12] gi|257466688|ref|ZP_05630999.1| 50S ribosomal protein L28P [Fusobacterium gonidiaformans ATCC 25563] gi|315917840|ref|ZP_07914080.1| LSU ribosomal protein L28P [Fusobacterium gonidiaformans ATCC 25563] gi|317059474|ref|ZP_07923959.1| LSU ribosomal protein L28P [Fusobacterium sp. 3_1_5R] gi|317060182|ref|ZP_07924667.1| LSU ribosomal protein L28P [Fusobacterium sp. D12] gi|313685150|gb|EFS21985.1| LSU ribosomal protein L28P [Fusobacterium sp. 3_1_5R] gi|313685858|gb|EFS22693.1| LSU ribosomal protein L28P [Fusobacterium sp. D12] gi|313691715|gb|EFS28550.1| LSU ribosomal protein L28P [Fusobacterium gonidiaformans ATCC 25563] Length = 85 Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+T ++SGNK+SH++ TRR + PNL T++ + ++++ L+S++ Sbjct: 2 QRCEITGTGIISGNKISHSHRLTRRVWKPNLQVTTILVN--GNPIKIKVCSRTLKSLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 ++ + + LS R++ Sbjct: 60 SEVEIMNILKANAATLSERLKK 81 >gi|255014028|ref|ZP_05286154.1| 50S ribosomal protein L28 [Bacteroides sp. 2_1_7] Length = 67 Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSH+ +T+R+F NL + L IS LR++ + G LD + + Sbjct: 1 MVGNNVSHSKRRTKRKFNVNLFTKKFYWVEQDCWVSLNISAAGLRTINKLG-LDAAIKMA 59 Query: 73 KKE 75 ++ Sbjct: 60 AEK 62 >gi|237752497|ref|ZP_04582977.1| 50s ribosomal protein l28 [Helicobacter winghamensis ATCC BAA-430] gi|229375986|gb|EEO26077.1| 50s ribosomal protein l28 [Helicobacter winghamensis ATCC BAA-430] Length = 62 Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C T K M GN VSHANNKT++R LPNL + + + + ++RI+ LR+++ Sbjct: 1 MARKCFFTGKGPMVGNNVSHANNKTKKRTLPNLRTVRIKLED-GRTMKVRIAASTLRTMK 59 Query: 61 RQ 62 ++ Sbjct: 60 KR 61 >gi|115375937|ref|ZP_01463185.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|310820701|ref|YP_003953059.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|115367020|gb|EAU66007.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] gi|309393773|gb|ADO71232.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1] Length = 63 Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C++ K + GN VSHANNKT+RR LPNL +I + + ++ ++ Sbjct: 1 MAWKCDICGKRPLVGNNVSHANNKTKRRTLPNLQKIRASVE--GRTERVLACTRCIK 55 >gi|304404151|ref|ZP_07385813.1| ribosomal protein L28 [Paenibacillus curdlanolyticus YK9] gi|304347129|gb|EFM12961.1| ribosomal protein L28 [Paenibacillus curdlanolyticus YK9] Length = 62 Score = 63.5 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C +T K +GN VSHANNK RR + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MSRKCAITGKAPGTGNHVSHANNKNRRSWGVNVQKVRILVD--GKPKRVWVSARALKS 56 >gi|170031460|ref|XP_001843603.1| 39S ribosomal protein L28, mitochondrial [Culex quinquefasciatus] gi|167870169|gb|EDS33552.1| 39S ribosomal protein L28, mitochondrial [Culex quinquefasciatus] Length = 283 Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SAR 80 + ++P L R + S ++ + + ++ L + G D +L + +L S Sbjct: 103 KRRVPHFWVPVLKRSVVHSQVLNEYMAVTVTDRTLDQIHDNHGFDHYLLKTPACDLRSML 162 Query: 81 MRTLRSQIL 89 L+ +IL Sbjct: 163 AIKLKKKIL 171 >gi|241190318|ref|YP_002967712.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195724|ref|YP_002969279.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|240248710|gb|ACS45650.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250278|gb|ACS47217.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793305|gb|ADG32840.1| 50S ribosomal protein L28 [Bifidobacterium animalis subsp. lactis V9] Length = 59 Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 K +G VSH++ + +RRFLPNL + D Q +LR+ L+ Sbjct: 2 CGKGPQTGYTVSHSHIRNKRRFLPNLQPVRTTVD--GQNVRLRVCTKCLK 49 >gi|145344900|ref|XP_001416962.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577188|gb|ABO95255.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 73 Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R C LT K +G VS ++ + + NL + ++ +LRIS AL+++ + Sbjct: 1 RKCMLTGKKANNGRTVSFSHIRNKTLQQVNLQYKRIYWPEQKRYVRLRISTNALKTLNKL 60 Query: 63 G 63 G Sbjct: 61 G 61 >gi|118619876|ref|YP_908208.1| 50S ribosomal protein L28 RpmB2 [Mycobacterium ulcerans Agy99] gi|183980323|ref|YP_001848614.1| 50S ribosomal protein L28 RpmB2 [Mycobacterium marinum M] gi|118571986|gb|ABL06737.1| 50S ribosomal protein L28 RpmB2 [Mycobacterium ulcerans Agy99] gi|183173649|gb|ACC38759.1| 50S ribosomal protein L28 RpmB2 [Mycobacterium marinum M] Length = 78 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 39/63 (61%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C++T +TV GN VSH++ ++RRR+ PN+ T ++ +LR+S ++ ++ Sbjct: 1 MSARCQVTGRTVSFGNTVSHSHRRSRRRWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 Query: 61 RQG 63 R G Sbjct: 61 RDG 63 >gi|11465690|ref|NP_053834.1| ribosomal protein L28 [Porphyra purpurea] gi|1710464|sp|P51224|RK28_PORPU RecName: Full=50S ribosomal protein L28, chloroplastic gi|1276690|gb|AAC08110.1| 50S ribosomal protein L28 [Porphyra purpurea] Length = 63 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 34/62 (54%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+ C+LT K +G VSH++ +T++ NL + S + ++ IS A++++ Sbjct: 1 MSKKCQLTGKVANNGYAVSHSHKRTKKLQNVNLQYKKVWSTEQNKWIKMLISTKAIKTLT 60 Query: 61 RQ 62 + Sbjct: 61 KA 62 >gi|283769592|ref|ZP_06342488.1| ribosomal protein L28 [Bulleidia extructa W1219] gi|283103860|gb|EFC05246.1| ribosomal protein L28 [Bulleidia extructa W1219] Length = 67 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC ++ K + GNK SH+ TRR++ NL ++ +I D + LRIS AL++++ Sbjct: 1 MSRVCTVSGKKALYGNKRSHSLRATRRKWNVNLQKVHMIVD--GKPQTLRISARALKTLK 58 >gi|300088035|ref|YP_003758557.1| 50S ribosomal protein L28 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527768|gb|ADJ26236.1| ribosomal protein L28 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 61 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 C+ KT G+ VSH+ +T +R PN ++ D + +L + LR++ + Sbjct: 2 KCDYCGKTPQYGHNVSHSKRRTNKRSEPNCHPAKVLVD--GKPMKLSLCTRCLRTLAK 57 >gi|195386494|ref|XP_002051939.1| GJ17276 [Drosophila virilis] gi|194148396|gb|EDW64094.1| GJ17276 [Drosophila virilis] Length = 300 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 5/75 (6%) Query: 24 KTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-S 78 +T+RR ++P L R + S ++ + + +++ L + G D +L + +L S Sbjct: 101 QTKRRVPHFWVPTLRRSVVHSLVLNEYMSVVVTERTLEQIHECHGFDHYLLKNLACDLRS 160 Query: 79 ARMRTLRSQILKKMS 93 A L+ +ILK + Sbjct: 161 ALALKLKREILKALQ 175 >gi|73748946|ref|YP_308185.1| 50S ribosomal protein L28 [Dehalococcoides sp. CBDB1] gi|147669713|ref|YP_001214531.1| 50S ribosomal protein L28 [Dehalococcoides sp. BAV1] gi|289432943|ref|YP_003462816.1| ribosomal protein L28 [Dehalococcoides sp. GT] gi|73660662|emb|CAI83269.1| ribosomal protein L28 [Dehalococcoides sp. CBDB1] gi|146270661|gb|ABQ17653.1| LSU ribosomal protein L28P [Dehalococcoides sp. BAV1] gi|288946663|gb|ADC74360.1| ribosomal protein L28 [Dehalococcoides sp. GT] Length = 62 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 CE+ KT G+ VSH+ +T R ++PN+ + + + ++++ +R+ Sbjct: 2 KCEMCGKTPSFGHNVSHSKRRTNRMWMPNIHSAKIAVN--GTEVRMKLCTRCIRT 54 >gi|167755880|ref|ZP_02428007.1| hypothetical protein CLORAM_01397 [Clostridium ramosum DSM 1402] gi|237734848|ref|ZP_04565329.1| 50S ribosomal protein L28 [Mollicutes bacterium D7] gi|167704819|gb|EDS19398.1| hypothetical protein CLORAM_01397 [Clostridium ramosum DSM 1402] gi|229382176|gb|EEO32267.1| 50S ribosomal protein L28 [Coprobacillus sp. D7] Length = 61 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+++ K MSGN SHA N +RR++ NL + T++ D + +RIS LR++ Sbjct: 1 MSRKCQISGKGPMSGNTRSHALNSSRRKWNVNLQKATILVD--GKPTTVRISARELRTLR 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|323303420|gb|EGA57215.1| Mrpl24p [Saccharomyces cerevisiae FostersB] Length = 199 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 33 LCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKENLSARMRTLRSQIL 89 L + L S+ + +K ++++ L+++ ++GG+D +L+ ++ + L LR ++L Sbjct: 41 LSKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTKEKSARIKELGPTGWKLRYRVL 100 Query: 90 KKMSE 94 K+ E Sbjct: 101 KRKDE 105 >gi|321259465|ref|XP_003194453.1| hypothetical protein CGB_E5200C [Cryptococcus gattii WM276] gi|317460924|gb|ADV22666.1| Hypothetical Protein CGB_E5200C [Cryptococcus gattii WM276] Length = 162 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 14/97 (14%) Query: 12 VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISK--------------CALR 57 SGN + KT+R F PNL + ++ + +K +R Sbjct: 23 TRSGNNKPKSLQKTKRTFKPNLTHVDWPVTVLGGPVPIDRTKEQSLPKLEGILMQVKKIR 82 Query: 58 SVERQGGLDRFLSNSKKENLSARMRTLRSQILKKMSE 94 VE+ GG++ L + + ++L+ LR+Q+ + + E Sbjct: 83 DVEKAGGIEGLLLSRRSKDLTPYGAALRAQLFESLHE 119 >gi|118443905|ref|YP_878308.1| 50S ribosomal protein L28 [Clostridium novyi NT] gi|166226566|sp|A0Q106|RL28_CLONN RecName: Full=50S ribosomal protein L28 gi|118134361|gb|ABK61405.1| ribosomal protein L28 [Clostridium novyi NT] Length = 63 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K V+SG + SH++ +++RR+ PN+ + + + + +K + LRS Sbjct: 1 MAKRCEVCGKGVVSGVQYSHSHRQSKRRWAPNIKSVRAVVNGVPKKVS--VCTRCLRS 56 >gi|297559188|ref|YP_003678162.1| ribosomal protein L28 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843636|gb|ADH65656.1| ribosomal protein L28 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 61 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K GN VSH++ +TRRR+ PN+ + + ++ ++ Sbjct: 1 MASVCDVCGKGPGFGNSVSHSHRRTRRRWNPNIQTVRTRVGGTPK--RVNACTSCIK 55 >gi|261338006|ref|ZP_05965890.1| ribosomal protein L28 [Bifidobacterium gallicum DSM 20093] gi|270277512|gb|EFA23366.1| ribosomal protein L28 [Bifidobacterium gallicum DSM 20093] Length = 64 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS C + K SG V+H++ + +R F PNL + + + ++R+ L+ Sbjct: 1 MSARCAVCGKGPKSGFSVTHSHIRNKRLFRPNLQPVRTTIE--GENVRIRVCAKCLK 55 >gi|160915445|ref|ZP_02077656.1| hypothetical protein EUBDOL_01453 [Eubacterium dolichum DSM 3991] gi|158432565|gb|EDP10854.1| hypothetical protein EUBDOL_01453 [Eubacterium dolichum DSM 3991] Length = 63 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +SGNK SH+ TRR + NL ++ +I D + +RIS AL++++ Sbjct: 1 MSKVCAITGKGPLSGNKRSHSMRATRRNWNVNLQKVKVIVD--GKPQTIRISARALKTLK 58 Query: 61 RQGGL 65 + + Sbjct: 59 NKNAI 63 >gi|332981573|ref|YP_004463014.1| 50S ribosomal protein L28P [Mahella australiensis 50-1 BON] gi|332699251|gb|AEE96192.1| LSU ribosomal protein L28P [Mahella australiensis 50-1 BON] Length = 63 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C + K+V GN +SH++ ++ RR+ PNL R+ ++ + + + LRS Sbjct: 1 MSKECAICHKSVAYGNAISHSHRRSNRRWEPNLRRVRIVVN--GAPKRAYVCTRCLRS 56 >gi|291276684|ref|YP_003516456.1| 50S ribosomal protein L28 [Helicobacter mustelae 12198] gi|290963878|emb|CBG39714.1| 50S ribosomal protein L28 [Helicobacter mustelae 12198] Length = 62 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNKT++R LPNL + + + +++++ LR+++ Sbjct: 1 MAKKCFLTGKGPMVGNHVSHANNKTKKRSLPNLRTVRIKLEDGG-SMRIKVAASTLRTMK 59 Query: 61 RQ 62 ++ Sbjct: 60 KR 61 >gi|115670844|ref|XP_787422.2| PREDICTED: similar to MGC84279 protein [Strongylocentrotus purpuratus] gi|115930574|ref|XP_001195540.1| PREDICTED: similar to MGC84279 protein [Strongylocentrotus purpuratus] Length = 306 Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANN--KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 +RV + + G + S + + + + + L S+I+++K+++ + + + Sbjct: 101 ARVGLWGGEGWVKGYRKSKGDRGVRLNKTWKTYVATRKLESEILDKKFEIPATNRVMDLI 160 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSE 94 + G D ++ + E+L S ++ +L +++ Sbjct: 161 DEAYGFDFYILQTPAEDLNSLVGMVVKRHLLLRLAS 196 >gi|71028414|ref|XP_763850.1| hypothetical protein [Theileria parva strain Muguga] gi|68350804|gb|EAN31567.1| hypothetical protein, conserved [Theileria parva] Length = 281 Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KVS++ KTR + P + + S ++ +R++ AL ++ GG D ++ N+ E Sbjct: 94 KVSYSLKKTRIKLKPLVFKKDFESKLLNTTVPNVRVTTSALHAITSSGGFDNYILNTFPE 153 Query: 76 NLSARMRTLRSQIL 89 L ++M ++ Sbjct: 154 QLRSQMGEQMRNVM 167 >gi|206896407|ref|YP_002246642.1| ribosomal protein L28 [Coprothermobacter proteolyticus DSM 5265] gi|226738058|sp|B5Y795|RL28_COPPD RecName: Full=50S ribosomal protein L28 gi|206739024|gb|ACI18102.1| ribosomal protein L28 [Coprothermobacter proteolyticus DSM 5265] Length = 63 Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+RVC + K G+ VSH+N +T RR++ NL R+ + + L+ Sbjct: 1 MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPD-GKVRTAYVCVKCLK 56 >gi|210633268|ref|ZP_03297733.1| hypothetical protein COLSTE_01646 [Collinsella stercoris DSM 13279] gi|229815447|ref|ZP_04445779.1| hypothetical protein COLINT_02495 [Collinsella intestinalis DSM 13280] gi|210159186|gb|EEA90157.1| hypothetical protein COLSTE_01646 [Collinsella stercoris DSM 13279] gi|229808980|gb|EEP44750.1| hypothetical protein COLINT_02495 [Collinsella intestinalis DSM 13280] Length = 62 Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VCE+ K ++G +SH++ + R+F PN+ R+ ++ + + + ++ + L+ Sbjct: 1 MSKVCEICGKHPVAGRSISHSHRVSNRKFRPNIQRVYVVVNGVRR--KMNVCTSCLK 55 >gi|150390534|ref|YP_001320583.1| ribosomal protein L28 [Alkaliphilus metalliredigens QYMF] gi|166987906|sp|A6TRV6|RL28_ALKMQ RecName: Full=50S ribosomal protein L28 gi|149950396|gb|ABR48924.1| ribosomal protein L28 [Alkaliphilus metalliredigens QYMF] Length = 63 Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC++ +K +SGN+VSH+N RR + PNL ++ I + +L++ LRS Sbjct: 1 MARVCDVCQKGKVSGNQVSHSNRHNRRTWTPNLRKVRAIVKGTPK--RLKVCTRCLRS 56 >gi|153954005|ref|YP_001394770.1| 50S ribosomal protein L28 [Clostridium kluyveri DSM 555] gi|219854619|ref|YP_002471741.1| hypothetical protein CKR_1276 [Clostridium kluyveri NBRC 12016] gi|189042430|sp|A5N7Z1|RL28_CLOK5 RecName: Full=50S ribosomal protein L28 gi|254801352|sp|B9E1F2|RL28_CLOK1 RecName: Full=50S ribosomal protein L28 gi|146346886|gb|EDK33422.1| RpmB [Clostridium kluyveri DSM 555] gi|219568343|dbj|BAH06327.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 63 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ K V+ G + SH++ +++R + PN+ +I I + + LRS Sbjct: 1 MSKKCEICGKGVVFGVQYSHSHRQSKRTWSPNIRKIKAIVKGTPRTIH--VCARCLRS 56 >gi|218282557|ref|ZP_03488807.1| hypothetical protein EUBIFOR_01389 [Eubacterium biforme DSM 3989] gi|218216544|gb|EEC90082.1| hypothetical protein EUBIFOR_01389 [Eubacterium biforme DSM 3989] Length = 63 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC ++ K +SGNK SH+ +RR++ NL ++ ++ D + +R+S L++++ Sbjct: 1 MSRVCAVSGKGPLSGNKRSHSMRASRRKWNVNLQKVRVVVD--GKPQTIRVSARTLKTLK 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|218961694|ref|YP_001741469.1| ribosomal protein L28 [Candidatus Cloacamonas acidaminovorans] gi|167730351|emb|CAO81263.1| ribosomal protein L28 [Candidatus Cloacamonas acidaminovorans] Length = 63 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+VC++ KT GN SHA N T+RRF PNL I + D ++++ L+ Sbjct: 1 MSKVCDICGKTAQVGNHRSHALNATKRRFYPNLHEIRVAID--GGTKKIKVCSSCLK 55 >gi|270308432|ref|YP_003330490.1| ribosomal protein L28 [Dehalococcoides sp. VS] gi|270154324|gb|ACZ62162.1| ribosomal protein L28 [Dehalococcoides sp. VS] Length = 62 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 CE+ KT G+ VSH+ +T R ++PN+ + + + ++++ +RS Sbjct: 2 KCEMCGKTPTFGHNVSHSKRRTNRVWMPNIHSAKVAVN--GTEVRMKLCTRCIRS 54 >gi|157119277|ref|XP_001653335.1| mitochondrial ribosomal protein, L28, putative [Aedes aegypti] gi|94469296|gb|ABF18497.1| mitochondrial ribosomal protein L28 [Aedes aegypti] gi|108875389|gb|EAT39614.1| mitochondrial ribosomal protein, L28, putative [Aedes aegypti] Length = 283 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 8/88 (9%) Query: 7 LTKKTVMSGNKVSHANNKTRRR----FLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + ++ G + N +RR ++P L R + S ++ + + ++ L + Sbjct: 87 WGGEAIVKGFQ---KRNPYKRRVPHFWVPVLRRSVVHSQVLNEYMAVTVTDRTLDQIHDN 143 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQIL 89 G D +L + +L S L+ ++L Sbjct: 144 HGFDHYLLKTPACDLRSMLAIKLKKKVL 171 >gi|291238881|ref|XP_002739345.1| PREDICTED: putative mitochondrial ribosomal protein L28-like [Saccoglossus kowalevskii] Length = 282 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 5/94 (5%) Query: 7 LTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQ 62 + + G K + + R+ + P + + + S+I+E+ + ++ L +++ Sbjct: 85 WGGEGWIKGYKKRNNKKMKPRVRKIWKPQVFQRSFYSEILERDIGPIGVTLSTLDQIDKC 144 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + +E+L S L+ +L K+ K Sbjct: 145 CGFDFYILKTPREDLQSKLGLDLKRHMLLKLLSK 178 >gi|309792331|ref|ZP_07686801.1| ribosomal protein L28 [Oscillochloris trichoides DG6] gi|308225646|gb|EFO79404.1| ribosomal protein L28 [Oscillochloris trichoides DG6] Length = 61 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C++ K+ G+ VS + +T R + PNL + T+ + + Q+R+ +R++ Sbjct: 1 MAK-CKMCGKSPSFGHNVSFSKRRTNRMWRPNLQKTTV-LNGEGKPEQIRVCTQCMRTMY 58 Query: 61 RQ 62 + Sbjct: 59 KA 60 >gi|253682003|ref|ZP_04862800.1| ribosomal protein L28 [Clostridium botulinum D str. 1873] gi|331269676|ref|YP_004396168.1| 50S ribosomal protein L28 [Clostridium botulinum BKT015925] gi|253561715|gb|EES91167.1| ribosomal protein L28 [Clostridium botulinum D str. 1873] gi|329126226|gb|AEB76171.1| ribosomal protein L28 [Clostridium botulinum BKT015925] Length = 63 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K V+SG + SH++ +++RR+ PN+ I + + + +K + LRS Sbjct: 1 MAKRCEVCGKGVVSGVQYSHSHRQSKRRWAPNIKNIRAVVNGVPKKIS--VCTRCLRS 56 >gi|329935154|ref|ZP_08285145.1| putative 50S ribosomal protein L28 [Streptomyces griseoaurantiacus M045] gi|329305223|gb|EGG49081.1| putative 50S ribosomal protein L28 [Streptomyces griseoaurantiacus M045] Length = 78 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS C+LT + G K+SH+ +T RRF PN+ + +LR+S A+++V+ Sbjct: 1 MSAHCQLTGAEPVFGKKISHSRRRTSRRFDPNIQNERYWLPSEGRNVRLRLSARAIKTVD 60 Query: 61 RQG 63 G Sbjct: 61 AIG 63 >gi|150020919|ref|YP_001306273.1| 50S ribosomal protein L28 [Thermosipho melanesiensis BI429] gi|166228169|sp|A6LLT7|RL28_THEM4 RecName: Full=50S ribosomal protein L28 gi|149793440|gb|ABR30888.1| ribosomal protein L28 [Thermosipho melanesiensis BI429] Length = 70 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCAL 56 M++ C++ K ++G VSH+N +T R F PNL ++ +I+D + ++ + L Sbjct: 1 MAK-CQVCGKGPVTGKNVSHSNRRTNRWFKPNLQKVRVITDE-GKIKRMWVCTDCL 54 >gi|227824766|ref|ZP_03989598.1| 50S ribosomal protein L28 [Acidaminococcus sp. D21] gi|226905265|gb|EEH91183.1| 50S ribosomal protein L28 [Acidaminococcus sp. D21] Length = 63 Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ +C++ KK +SGN VSH+N +R + PN+ ++ + D + + LRS Sbjct: 1 MACICDICKKGELSGNNVSHSNRHVKRSWKPNIQKVKAVVDGEVKSV--NVCTRCLRS 56 >gi|154249705|ref|YP_001410530.1| ribosomal protein L28 [Fervidobacterium nodosum Rt17-B1] gi|171769354|sp|A7HLU0|RL28_FERNB RecName: Full=50S ribosomal protein L28 gi|154153641|gb|ABS60873.1| ribosomal protein L28 [Fervidobacterium nodosum Rt17-B1] Length = 73 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE+ K +G VSH+N T R F PN+ ++ ++ D ++ + L+ Sbjct: 1 MAK-CEICGKEPRAGKNVSHSNRHTNRWFKPNVQKVRVLLDD-GTVKRMNVCTSCLK 55 >gi|42526502|ref|NP_971600.1| ribosomal protein L28 [Treponema denticola ATCC 35405] gi|67461474|sp|Q73P09|RL28_TREDE RecName: Full=50S ribosomal protein L28 gi|41816695|gb|AAS11481.1| ribosomal protein L28 [Treponema denticola ATCC 35405] gi|325473443|gb|EGC76638.1| 50S ribosomal protein L28 [Treponema denticola F0402] Length = 63 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSRVCE+ K +SGN VS + T+R + PNL + + ++I + +++ L+S Sbjct: 1 MSRVCEICGKGSLSGNSVSKSKIHTKRVWKPNL--VNVKTEIGGRTLTIKMCSRCLKS 56 >gi|156084812|ref|XP_001609889.1| hypothetical protein [Babesia bovis T2Bo] gi|154797141|gb|EDO06321.1| conserved hypothetical protein [Babesia bovis] Length = 292 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKYQ-LRISKCALRSVERQGGLDRFLSNSKKE 75 KV+ + +TR + PN+ + + S+++ +R++ A+ ++ GG D ++ N+ E Sbjct: 60 KVAFSLKRTRVKLRPNVVKKDIESELLNSTLTNVRVTTSAIHAMTSAGGFDNYILNTPPE 119 Query: 76 NLSARMRTLRSQIL 89 L +++ + Sbjct: 120 QLRSQLGERMRSVA 133 >gi|225717432|gb|ACO14562.1| 39S ribosomal protein L28, mitochondrial precursor [Caligus clemensi] Length = 295 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 7 LTKKTVMSGNKVSHANNKTR-------RRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 + ++ G R + P L L S ++++ ++ ++ L+ V Sbjct: 95 WGGEGIIKGLLEPEKQRHYPNPRVPQCRYWWPKLHLSVLYSRVLDKYIEMPATRRGLKLV 154 Query: 60 ERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 + G D +L N+ + + + ++ +IL + Sbjct: 155 DEAYGFDNYLLNTPVNEIYAWTLLRIKREILLSL 188 >gi|304316963|ref|YP_003852108.1| ribosomal protein L28 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778465|gb|ADL69024.1| ribosomal protein L28 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 62 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 R C++ KT M+G + SH++ K+ +++ PNL R+ I D +L + L+S Sbjct: 2 RKCDVCGKTPMAGYQYSHSHRKSIKKWQPNLKRVRAIVD--GTPVRLNVCTKCLKS 55 >gi|328948867|ref|YP_004366204.1| 50S ribosomal protein L28 [Treponema succinifaciens DSM 2489] gi|328449191|gb|AEB14907.1| 50S ribosomal protein L28 [Treponema succinifaciens DSM 2489] Length = 76 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C++ K M GN+VS + N TRR++ PNL +I D + +I LRS Sbjct: 1 MSRSCDVCGKHSMHGNRVSKSYNHTRRQWKPNLLKIKTEIDGTTRTI--KICTQCLRS 56 >gi|254449094|ref|ZP_05062546.1| ribosomal protein L28 [gamma proteobacterium HTCC5015] gi|198261286|gb|EDY85579.1| ribosomal protein L28 [gamma proteobacterium HTCC5015] Length = 61 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 SH+N K++RRFLPNL + + +LRIS A+R ++++G +D L + + Sbjct: 2 SHSNIKSKRRFLPNLQTHRFWVESENRFVKLRISTKAMRIIDKKG-IDAVLKDIRAR 57 >gi|254519233|ref|ZP_05131289.1| ribosomal protein L28 [Clostridium sp. 7_2_43FAA] gi|226912982|gb|EEH98183.1| ribosomal protein L28 [Clostridium sp. 7_2_43FAA] Length = 63 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V+SG + SH++ +++R + PN+ R+ + + + + LRS Sbjct: 1 MARRCEVCNKGVVSGTQYSHSHRQSKRTWAPNIKRVKALVNGTPKTVH--VCTRCLRS 56 >gi|169350116|ref|ZP_02867054.1| hypothetical protein CLOSPI_00858 [Clostridium spiroforme DSM 1552] gi|169293329|gb|EDS75462.1| hypothetical protein CLOSPI_00858 [Clostridium spiroforme DSM 1552] Length = 61 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C+++ K MSGN SHA N +RR++ NL + T++ D + ++IS LR++ Sbjct: 1 MSRKCQISGKGPMSGNTRSHALNSSRRKWNVNLQKATILVD--GKPTTVKISARELRTLR 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|237750768|ref|ZP_04581248.1| ribosomal protein L28 [Helicobacter bilis ATCC 43879] gi|229373858|gb|EEO24249.1| ribosomal protein L28 [Helicobacter bilis ATCC 43879] Length = 63 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C++T K VM G VSHANNKT++R LPNL + L + +++++ LR+++ Sbjct: 1 MARRCDITGKGVMVGCNVSHANNKTKKRSLPNLRSMRLKLED-GTSIRIKVAASTLRTLK 59 Query: 61 RQ 62 ++ Sbjct: 60 KK 61 >gi|187250494|ref|YP_001874976.1| 50S ribosomal protein L28 [Elusimicrobium minutum Pei191] gi|226694765|sp|B2KAU3|RL28_ELUMP RecName: Full=50S ribosomal protein L28 gi|186970654|gb|ACC97639.1| Ribosomal protein L28 [Elusimicrobium minutum Pei191] Length = 64 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS C+L K ++G SH++ T+R F PNL + ++ + + + ++S Sbjct: 1 MSYKCQLCGKGSVTGGSYSHSHRNTKRTFRPNLQKQKVVLE--GKTQTAYVCTKCIKS 56 >gi|332375775|gb|AEE63028.1| unknown [Dendroctonus ponderosae] Length = 284 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Query: 6 ELTKKTVMSGNKVSHA-NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGG 64 + V+ G ++ + + ++P L R + S+++++ + + +++ + + G Sbjct: 86 MWGGEAVVQGFQIKDRYSRRVPHFWVPVLKRSVVHSEVLDKYFSVIVTERTISLINSNYG 145 Query: 65 LDRFLSNSKKENL-SARMRTLRSQILKKMS 93 D +L + +L S L+ +IL+++ Sbjct: 146 FDHYLLKTPACDLHSLLPLGLKRKILQELE 175 >gi|226227377|ref|YP_002761483.1| 50S ribosomal protein L28 [Gemmatimonas aurantiaca T-27] gi|226090568|dbj|BAH39013.1| 50S ribosomal protein L28 [Gemmatimonas aurantiaca T-27] Length = 73 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCAL 56 C K V GN VSHANNKTRR + PNL + + + ++++ L Sbjct: 7 RCYHCDKGVAFGNNVSHANNKTRRTWKPNLQVVRTL--EAGKIIKVKVCTRCL 57 >gi|317129251|ref|YP_004095533.1| ribosomal protein L28 [Bacillus cellulosilyticus DSM 2522] gi|315474199|gb|ADU30802.1| ribosomal protein L28 [Bacillus cellulosilyticus DSM 2522] Length = 62 Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C +T K SGNK SHA N T+RR+ N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MSRKCVITGKGPRSGNKRSHALNATKRRWGANVQKVRIMVD--GKPKRVYVSARALKS 56 >gi|254458326|ref|ZP_05071752.1| ribosomal protein L28 [Campylobacterales bacterium GD 1] gi|207085162|gb|EDZ62448.1| ribosomal protein L28 [Campylobacterales bacterium GD 1] Length = 62 Score = 62.0 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C ++ K MSGN VSHA N+T+RRFL NL + + + +++IS LR+++ Sbjct: 1 MARKCAISGKGPMSGNNVSHAKNRTKRRFLLNLRTVRITLED-GTTQKIKISARELRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KN 61 >gi|15829167|ref|NP_326527.1| 50S ribosomal protein L28 [Mycoplasma pulmonis UAB CTIP] gi|20139641|sp|Q98PM6|RL28_MYCPU RecName: Full=50S ribosomal protein L28 gi|14090111|emb|CAC13869.1| 50S RIBOSOMAL PROTEIN L28 [Mycoplasma pulmonis] Length = 63 Score = 62.0 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR +LT K M GN SHA N TRRRF NL +++++ + +K L++S +++ Sbjct: 1 MSRRDDLTGKGPMFGNNRSHALNATRRRFNLNLQKVSVVVN--GRKVNLKVSAKTAKTLR 58 Query: 61 RQ 62 R+ Sbjct: 59 RK 60 >gi|253795690|ref|YP_003038786.1| putative 50S ribosomal subunit protein L28 [Candidatus Hodgkinia cicadicola Dsem] gi|253739998|gb|ACT34333.1| putative 50S ribosomal subunit protein L28 [Candidatus Hodgkinia cicadicola Dsem] Length = 91 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 + G +VSH+N KT+R+F PN + L S ++ + + +R V + GG+D ++ Sbjct: 9 KPLFGARVSHSNKKTKRKFKPNAVKTKLWSLVLNRFVSFKARARFVREVRKYGGVDFYVV 68 Query: 71 NSKKENLSARMRTLRSQILK 90 N K + + L+ Q+L Sbjct: 69 NRK--RMPKPLLKLKLQMLA 86 >gi|257063711|ref|YP_003143383.1| LSU ribosomal protein L28P [Slackia heliotrinireducens DSM 20476] gi|256791364|gb|ACV22034.1| LSU ribosomal protein L28P [Slackia heliotrinireducens DSM 20476] Length = 62 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VCE+ K ++G +SH++ + R F PN+ +IT++ + + +RS Sbjct: 1 MSKVCEICGKHPVAGRSISHSHRVSNRVFRPNIQKITVL--ENGHPVKKNVCTQCMRS 56 >gi|124515678|gb|EAY57187.1| ribosomal protein L28 [Leptospirillum rubarum] gi|206602184|gb|EDZ38666.1| Ribosomal protein L28 [Leptospirillum sp. Group II '5-way CG'] Length = 63 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+ C + KT + GN++SH++ T+R F PNL + + + Q ++R+ +RS Sbjct: 1 MADSCAVCGKTKVVGNQISHSHRVTKRIFKPNLQNVRALVN--GQARRIRVCTRCIRS 56 >gi|257791103|ref|YP_003181709.1| 50S ribosomal protein L28 [Eggerthella lenta DSM 2243] gi|317488173|ref|ZP_07946745.1| ribosomal protein L28 [Eggerthella sp. 1_3_56FAA] gi|325830797|ref|ZP_08164181.1| ribosomal protein L28 [Eggerthella sp. HGA1] gi|257475000|gb|ACV55320.1| ribosomal protein L28 [Eggerthella lenta DSM 2243] gi|316912718|gb|EFV34255.1| ribosomal protein L28 [Eggerthella sp. 1_3_56FAA] gi|325487204|gb|EGC89647.1| ribosomal protein L28 [Eggerthella sp. HGA1] Length = 63 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS++CE+ K +G VSH++ T R F PN+ R+T+ D + + ++ Sbjct: 1 MSKICEVCGKAPSAGRNVSHSHRVTNRWFRPNIQRVTIK-DKEGHVRKANVCTKCMK 56 >gi|323702706|ref|ZP_08114367.1| ribosomal protein L28 [Desulfotomaculum nigrificans DSM 574] gi|323532369|gb|EGB22247.1| ribosomal protein L28 [Desulfotomaculum nigrificans DSM 574] Length = 62 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K + G K+SH++ +T+R + PNL R+ I D ++ + LRS Sbjct: 1 MAK-CEVCGKGITVGIKLSHSHIRTKRTWSPNLQRVKAIVD--GSPKRIMVCTRCLRS 55 >gi|57233963|ref|YP_181974.1| 50S ribosomal protein L28 [Dehalococcoides ethenogenes 195] gi|57224411|gb|AAW39468.1| ribosomal protein L28 [Dehalococcoides ethenogenes 195] Length = 62 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 CE+ KT G+ VSH+ +T R ++PN+ + + + ++++ +RS Sbjct: 2 KCEMCGKTPTYGHNVSHSKRRTNRVWMPNIHSAKVTVN--GAEVRMKLCTRCIRS 54 >gi|237667804|ref|ZP_04527788.1| ribosomal protein L28 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656152|gb|EEP53708.1| ribosomal protein L28 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 63 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G + SH++ +++R + PN+ ++ + + + + LRS Sbjct: 1 MARRCEICDKGVVAGVQYSHSHRQSKRTWAPNIKKVKALVNGTPKTVH--VCTRCLRS 56 >gi|206890424|ref|YP_002249673.1| ribosomal protein L28 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742362|gb|ACI21419.1| ribosomal protein L28 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 62 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 C + K + GN VSHANNKT+R F PNL R+ +I++ Q ++ + LRS Sbjct: 4 CYVCGKKKVIGNNVSHANNKTKRYFFPNLQRMKIITERGPQ--RVHVCTRCLRS 55 >gi|167040381|ref|YP_001663366.1| 50S ribosomal protein L28 [Thermoanaerobacter sp. X514] gi|256752281|ref|ZP_05493144.1| ribosomal protein L28 [Thermoanaerobacter ethanolicus CCSD1] gi|300914465|ref|ZP_07131781.1| ribosomal protein L28 [Thermoanaerobacter sp. X561] gi|307264811|ref|ZP_07546373.1| ribosomal protein L28 [Thermoanaerobacter wiegelii Rt8.B1] gi|307724299|ref|YP_003904050.1| 50S ribosomal protein L28 [Thermoanaerobacter sp. X513] gi|326389534|ref|ZP_08211101.1| ribosomal protein L28 [Thermoanaerobacter ethanolicus JW 200] gi|226699178|sp|B0K1Y2|RL28_THEPX RecName: Full=50S ribosomal protein L28 gi|166854621|gb|ABY93030.1| ribosomal protein L28 [Thermoanaerobacter sp. X514] gi|256748849|gb|EEU61890.1| ribosomal protein L28 [Thermoanaerobacter ethanolicus CCSD1] gi|300889400|gb|EFK84546.1| ribosomal protein L28 [Thermoanaerobacter sp. X561] gi|306920069|gb|EFN50281.1| ribosomal protein L28 [Thermoanaerobacter wiegelii Rt8.B1] gi|307581360|gb|ADN54759.1| ribosomal protein L28 [Thermoanaerobacter sp. X513] gi|325994539|gb|EGD52964.1| ribosomal protein L28 [Thermoanaerobacter ethanolicus JW 200] Length = 62 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 C++ K ++G + SH++ K+ R++ PN+ ++ I D +L + L+ Sbjct: 3 KCDICGKGPLAGYQYSHSHRKSIRKWKPNIKKVRAIVD--GTPVRLHVCTKCLK 54 >gi|111225169|ref|YP_715963.1| 50S ribosomal protein L28 [Frankia alni ACN14a] gi|111152701|emb|CAJ64444.1| 50S ribosomal protein L28-1 [Frankia alni ACN14a] Length = 65 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 S VC++ K G VSH++ +TRRR+ PN+ + + + +L + ++ Sbjct: 5 SSVCDVCGKGPGFGMSVSHSHRRTRRRWNPNIQTVRAVVGGTRR--RLNVCTSCIK 58 >gi|255348449|ref|ZP_05380456.1| 50S ribosomal protein L28 [Chlamydia trachomatis 70] gi|255502991|ref|ZP_05381381.1| 50S ribosomal protein L28 [Chlamydia trachomatis 70s] Length = 89 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVSHANN-------------KTRRRFLPNLCRITLISDIMEQKY 47 MS+ C LT + G + +T+RRF PN+ L S + Sbjct: 1 MSKKCALTGRKPRRGYSYAIRGISKKKKGIGLKITGRTKRRFFPNMMTKRLWSTEENRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR V++ G LD+ ++ +K + Sbjct: 61 KLKISAAALRLVDKLG-LDQVVARAKSK 87 >gi|307720496|ref|YP_003891636.1| 50S ribosomal protein L28P [Sulfurimonas autotrophica DSM 16294] gi|306978589|gb|ADN08624.1| LSU ribosomal protein L28P [Sulfurimonas autotrophica DSM 16294] Length = 62 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C ++ K MSGN VSHA N+T+RRFL NL + + + +++IS LR+++ Sbjct: 1 MARRCAISGKGPMSGNNVSHAKNRTKRRFLLNLRTVRITLED-GTTKKIKISARELRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KN 61 >gi|262039616|ref|ZP_06012910.1| 50S ribosomal protein L28 [Leptotrichia goodfellowii F0264] gi|261746373|gb|EEY33918.1| 50S ribosomal protein L28 [Leptotrichia goodfellowii F0264] Length = 87 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 5/84 (5%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 ++CE+ K V GN VSH++ T+R + PNL +TL D + ++R+ A+++++ + Sbjct: 2 QICEVFGKRVGHGNMVSHSHRATKRIWRPNLQTMTLNVD--GSEIKVRVCTKAMKTLKGK 59 Query: 63 G--GLDRFLSNSKKENLSARMRTL 84 + + L +K NLS R+ + Sbjct: 60 NVDQVKKILLENKD-NLSPRISKV 82 >gi|289578498|ref|YP_003477125.1| ribosomal protein L28 [Thermoanaerobacter italicus Ab9] gi|297544774|ref|YP_003677076.1| 50S ribosomal protein L28 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528211|gb|ADD02563.1| ribosomal protein L28 [Thermoanaerobacter italicus Ab9] gi|296842549|gb|ADH61065.1| ribosomal protein L28 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 62 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 C++ K ++G + SH++ K+ R++ PNL ++ I + +L + L+S Sbjct: 3 KCDVCGKGPLAGYQYSHSHRKSIRKWKPNLKKVRAIVN--GTPVRLHVCTKCLKS 55 >gi|302670825|ref|YP_003830785.1| ribosomal protein L28 RpmB [Butyrivibrio proteoclasticus B316] gi|302395298|gb|ADL34203.1| ribosomal protein L28 RpmB [Butyrivibrio proteoclasticus B316] Length = 61 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V GN VSH++ ++ R + N+ + + ++ + LRS Sbjct: 1 MAK-CDICGKGVHFGNNVSHSHRRSNRVWKSNVQHVACKVN--GSTKRMHVCSSCLRS 55 >gi|255525639|ref|ZP_05392572.1| ribosomal protein L28 [Clostridium carboxidivorans P7] gi|296185401|ref|ZP_06853811.1| ribosomal protein L28 [Clostridium carboxidivorans P7] gi|255510625|gb|EET86932.1| ribosomal protein L28 [Clostridium carboxidivorans P7] gi|296050235|gb|EFG89659.1| ribosomal protein L28 [Clostridium carboxidivorans P7] Length = 63 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ +K V+ G + SH++ +++R + PN+ ++ I + + + LRS Sbjct: 1 MSKKCEICEKGVVFGVQYSHSHRQSKRSWAPNIRKVKAIVNGTPKTIH--VCTRCLRS 56 >gi|317010740|gb|ADU84487.1| 50S ribosomal protein L28 [Helicobacter pylori SouthAfrica7] Length = 62 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MARRCALTFKGPMIGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTRRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|167037720|ref|YP_001665298.1| 50S ribosomal protein L28 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116135|ref|YP_004186294.1| 50S ribosomal protein L28 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226699177|sp|B0K9Z9|RL28_THEP3 RecName: Full=50S ribosomal protein L28 gi|166856554|gb|ABY94962.1| ribosomal protein L28 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929226|gb|ADV79911.1| ribosomal protein L28 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 62 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 C++ K ++G + SH++ K+ R++ PN+ ++ I D + +L + L+ Sbjct: 3 KCDICGKGPLAGYQYSHSHRKSIRKWKPNIKKVRAIVD--DTPVRLHVCTKCLK 54 >gi|315187552|gb|EFU21308.1| LSU ribosomal protein L28P [Spirochaeta thermophila DSM 6578] Length = 63 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K SG VSHA+N+++R F PN+ +I ++ ++ ++I LRS Sbjct: 1 MARRCEICGKQTRSGFTVSHAHNRSKRTFKPNIQKIQIVDG--KRVRTIKICTRCLRS 56 >gi|298245811|ref|ZP_06969617.1| ribosomal protein L28 [Ktedonobacter racemifer DSM 44963] gi|297553292|gb|EFH87157.1| ribosomal protein L28 [Ktedonobacter racemifer DSM 44963] Length = 65 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 + C++ ++ M GN V H+ ++TRRRF+ N+ R L + Q I +R++ + Sbjct: 3 AGRCDVCERKPMYGNNVPHSQHRTRRRFVLNVQRRRLEVNGTVQNV--NICTRCMRTMSK 60 >gi|325335861|gb|ADZ12135.1| Ribosomal protein L28 [Riemerella anatipestifer RA-GD] Length = 66 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 28/51 (54%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 M GN VSHANNKT+RRF NL E+ L++S LR + + G Sbjct: 1 MVGNHVSHANNKTKRRFEINLLEKKFYLPEQEKHITLKVSAHGLRVINKIG 51 >gi|119606237|gb|EAW85831.1| mitochondrial ribosomal protein L28, isoform CRA_d [Homo sapiens] Length = 178 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNSK 73 ++ GLD ++ + Sbjct: 135 IDEAYGLDFYILKAS 149 >gi|293402253|ref|ZP_06646391.1| ribosomal protein L28 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304360|gb|EFE45611.1| ribosomal protein L28 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 63 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +SGNK SH+ +RR + NL ++ ++ D + +RIS AL++++ Sbjct: 1 MSKVCAITGKGPLSGNKRSHSMRASRRNWNVNLQKVKVVVD--GKPQTIRISARALKTLK 58 Query: 61 RQGGL 65 + + Sbjct: 59 NKNAI 63 >gi|308234574|ref|ZP_07665311.1| ribosomal protein L28 [Atopobium vaginae DSM 15829] gi|328944363|ref|ZP_08241826.1| 50S ribosomal protein L28 [Atopobium vaginae DSM 15829] gi|327491078|gb|EGF22854.1| 50S ribosomal protein L28 [Atopobium vaginae DSM 15829] Length = 66 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC++ K ++G +SH++ R+F PN+ R+T+ D + + + L+S Sbjct: 1 MSKVCDICGKHAVAGRSISHSHRTVNRKFKPNIQRVTVFED--GKTPKKNVCTRCLKS 56 >gi|302335850|ref|YP_003801057.1| ribosomal protein L28 [Olsenella uli DSM 7084] gi|301319690|gb|ADK68177.1| ribosomal protein L28 [Olsenella uli DSM 7084] Length = 66 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC++ K ++G +SH++ R+F PN+ R+T+ + + + L+S Sbjct: 1 MSKVCDICGKHAVAGRSISHSHRTVTRKFKPNIQRVTVF--ENGRAVKKNVCTRCLKS 56 >gi|242004927|ref|XP_002423327.1| mitochondrial 50S ribosomal protein L28, putative [Pediculus humanus corporis] gi|212506346|gb|EEB10589.1| mitochondrial 50S ribosomal protein L28, putative [Pediculus humanus corporis] Length = 233 Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 11/94 (11%) Query: 9 KKTVMSGNKVSHANNKTR------RRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 +T++ G NK + + + P L R + S+I+++ + + ++K + V Sbjct: 68 GETIIQG----FKKNKNKYEINVPKFWTPTLFRSVIYSEILDKYFSVILTKRVVELVHEH 123 Query: 63 GGLDRFLSNSKKENLSAR-MRTLRSQILKKMSEK 95 GLD +L +K +L L+ ++L K+ K Sbjct: 124 KGLDNYLLKTKACDLQTLIALKLKRELLFKLHYK 157 >gi|308069667|ref|YP_003871272.1| 50S ribosomal protein L28 [Paenibacillus polymyxa E681] gi|305858946|gb|ADM70734.1| 50S ribosomal protein L28 [Paenibacillus polymyxa E681] Length = 62 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MSR C +T K SGN VSHANN+ RR + N+ ++ ++ + + ++ +S AL+ Sbjct: 1 MSRKCSVTGKKPGSGNHVSHANNRNRRTWGVNVQKVRILVN--GKPKRVYVSTRALK 55 >gi|164687788|ref|ZP_02211816.1| hypothetical protein CLOBAR_01432 [Clostridium bartlettii DSM 16795] gi|164603063|gb|EDQ96528.1| hypothetical protein CLOBAR_01432 [Clostridium bartlettii DSM 16795] Length = 62 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC + K +SGN+VSH+N +R + NL + ++ + + ++++ LRS Sbjct: 1 MAKVCCVCGKGKVSGNQVSHSNKHNKRTWSANLRNVRVVEEGTPK--RVKVCTRCLRS 56 >gi|225180912|ref|ZP_03734360.1| ribosomal protein L28 [Dethiobacter alkaliphilus AHT 1] gi|225168393|gb|EEG77196.1| ribosomal protein L28 [Dethiobacter alkaliphilus AHT 1] Length = 63 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C + K +G VSH+N KT+R + N+ ++ + D + ++ + L+ Sbjct: 1 MAKKCVVCGKGTETGFAVSHSNIKTKRTWKSNVQKVKALVDGTPR--RVNVCTRCLK 55 >gi|304440538|ref|ZP_07400425.1| 50S ribosomal protein L28 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371016|gb|EFM24635.1| 50S ribosomal protein L28 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 63 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K + GN +S ++ + R + PNL R+ + + ++ + LRS Sbjct: 1 MAKKCEICGKQRVFGNTISFSHKRGNRSWAPNLRRVRAVVN--GTTKRIDVCTRCLRS 56 >gi|322384322|ref|ZP_08058020.1| 50S ribosomal protein L28-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150824|gb|EFX44261.1| 50S ribosomal protein L28-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 62 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C +T ++ SGN VSHANNK +R + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MSRKCYVTGRSPKSGNHVSHANNKNKRSWGVNVQKVRILVD--GKPKRVYVSARALKS 56 >gi|297748215|gb|ADI50761.1| LSU ribosomal protein L28P [Chlamydia trachomatis D-EC] gi|297749095|gb|ADI51773.1| LSU ribosomal protein L28P [Chlamydia trachomatis D-LC] Length = 106 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+ C LT + G + +T+RRF PN+ L S + Sbjct: 18 MSKKCALTGRKPRRGYSYAIRGISKKKKGIGLKVTGRTKRRFFPNMMTKRLWSTEENRFL 77 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR V++ G LD+ ++ +K + Sbjct: 78 KLKISAAALRLVDKLG-LDQVVARAKSK 104 >gi|188527670|ref|YP_001910357.1| 50S ribosomal protein L28 [Helicobacter pylori Shi470] gi|207092590|ref|ZP_03240377.1| 50S ribosomal protein L28 [Helicobacter pylori HPKX_438_AG0C1] gi|208434415|ref|YP_002266081.1| ribosomal protein L28 [Helicobacter pylori G27] gi|217034359|ref|ZP_03439774.1| hypothetical protein HP9810_889g4 [Helicobacter pylori 98-10] gi|308182646|ref|YP_003926773.1| 50S ribosomal protein L28 [Helicobacter pylori PeCan4] gi|226694946|sp|B5Z6L6|RL28_HELPG RecName: Full=50S ribosomal protein L28 gi|226694948|sp|B2UTZ5|RL28_HELPS RecName: Full=50S ribosomal protein L28 gi|188143910|gb|ACD48327.1| 50S ribosomal protein L28 [Helicobacter pylori Shi470] gi|208432344|gb|ACI27215.1| ribosomal protein L28 [Helicobacter pylori G27] gi|216943154|gb|EEC22624.1| hypothetical protein HP9810_889g4 [Helicobacter pylori 98-10] gi|297379688|gb|ADI34575.1| ribosomal protein L28 [Helicobacter pylori v225d] gi|308061820|gb|ADO03708.1| 50S ribosomal protein L28 [Helicobacter pylori Cuz20] gi|308063711|gb|ADO05598.1| 50S ribosomal protein L28 [Helicobacter pylori Sat464] gi|308064831|gb|ADO06723.1| 50S ribosomal protein L28 [Helicobacter pylori PeCan4] gi|317177670|dbj|BAJ55459.1| 50S ribosomal protein L28 [Helicobacter pylori F16] gi|317179139|dbj|BAJ56927.1| 50S ribosomal protein L28 [Helicobacter pylori F30] gi|317181812|dbj|BAJ59596.1| 50S ribosomal protein L28 [Helicobacter pylori F57] gi|332673716|gb|AEE70533.1| 50S ribosomal protein L28 [Helicobacter pylori 83] Length = 62 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGPMVGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|150016039|ref|YP_001308293.1| 50S ribosomal protein L28 [Clostridium beijerinckii NCIMB 8052] gi|189042429|sp|A6LSK7|RL28_CLOB8 RecName: Full=50S ribosomal protein L28 gi|149902504|gb|ABR33337.1| ribosomal protein L28 [Clostridium beijerinckii NCIMB 8052] Length = 63 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G SH++ +++R + PN+ ++ + + + + LRS Sbjct: 1 MARRCEICDKGVVAGVSYSHSHRQSKRTWAPNIKKVKALVNGTPKTVH--VCTRCLRS 56 >gi|261839673|gb|ACX99438.1| 50S ribosomal protein L28 [Helicobacter pylori 52] Length = 62 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGPMVGNHVSHANNKNKRRLLPNLRSIKVQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|210622467|ref|ZP_03293172.1| hypothetical protein CLOHIR_01120 [Clostridium hiranonis DSM 13275] gi|210154180|gb|EEA85186.1| hypothetical protein CLOHIR_01120 [Clostridium hiranonis DSM 13275] Length = 62 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSRVC + K SGN VSH+N +R + NL + ++ ++++ LRS Sbjct: 1 MSRVCSVCGKGKHSGNTVSHSNKHNKRTWSANLRTVRVV--ENGTPKRVKVCTRCLRS 56 >gi|260893810|ref|YP_003239907.1| ribosomal protein L28 [Ammonifex degensii KC4] gi|260865951|gb|ACX53057.1| ribosomal protein L28 [Ammonifex degensii KC4] Length = 63 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C + + + GN+ SH+N + R +PNL R+ I D + ++R+ L+ Sbjct: 1 MARRCAICGRGISFGNQRSHSNKASGRIRMPNLQRVKAIVD--GRPRRIRVCTRCLK 55 >gi|255994498|ref|ZP_05427633.1| ribosomal protein L28 [Eubacterium saphenum ATCC 49989] gi|255993211|gb|EEU03300.1| ribosomal protein L28 [Eubacterium saphenum ATCC 49989] Length = 63 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ K +SGN+VSH+N ++R++ N+ ++ ++ + + + ++S Sbjct: 1 MSKKCEICGKGQVSGNRVSHSNIHSKRKWNANIQKVQIV--ENGKVRKANVCTSCMKS 56 >gi|187933458|ref|YP_001885423.1| 50S ribosomal protein L28 [Clostridium botulinum B str. Eklund 17B] gi|188590094|ref|YP_001920570.1| 50S ribosomal protein L28 [Clostridium botulinum E3 str. Alaska E43] gi|251780003|ref|ZP_04822923.1| 50S ribosomal protein L28 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226738054|sp|B2V4C1|RL28_CLOBA RecName: Full=50S ribosomal protein L28 gi|226738055|sp|B2THS7|RL28_CLOBB RecName: Full=50S ribosomal protein L28 gi|187721611|gb|ACD22832.1| 50S ribosomal protein L28 [Clostridium botulinum B str. Eklund 17B] gi|188500375|gb|ACD53511.1| 50S ribosomal protein L28 [Clostridium botulinum E3 str. Alaska E43] gi|243084318|gb|EES50208.1| 50S ribosomal protein L28 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 63 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G + SH++ +++R + PN+ +I + + + + + LRS Sbjct: 1 MARRCEICDKGVVAGVQFSHSHRQSKRTWAPNIKKIKALVNGTPKTVR--VCTRCLRS 56 >gi|302874757|ref|YP_003843390.1| 50S ribosomal protein L28 [Clostridium cellulovorans 743B] gi|307690628|ref|ZP_07633074.1| 50S ribosomal protein L28 [Clostridium cellulovorans 743B] gi|302577614|gb|ADL51626.1| ribosomal protein L28 [Clostridium cellulovorans 743B] Length = 63 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR CE+ K V+SG + SH++ ++R + PN+ ++ + + + LRS Sbjct: 1 MSRKCEICGKGVISGAQYSHSHRASKRTWAPNIKKVRAVVK--GATKSVHVCTRCLRS 56 >gi|289740245|gb|ADD18870.1| mitochondrial ribosomal protein L28 [Glossina morsitans morsitans] Length = 300 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Query: 7 LTKKTVMSGNKVSHA-NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGL 65 + V+ G + H + ++P L R + S+++ + + ++ L + G Sbjct: 87 WGGEAVIKGFQKRHRLKRRVPHFWVPVLKRSVVHSEVLNEYMAVVVTDTTLEKIHECRGF 146 Query: 66 DRFLSNSKKENL-SARMRTLRSQILKKM 92 D +L + +L S TL+ +IL ++ Sbjct: 147 DHYLLKNPACDLRSTLALTLKRKILLEL 174 >gi|161833678|ref|YP_001597874.1| 50S ribosomal subunit protein L28 [Candidatus Sulcia muelleri GWSS] gi|293977789|ref|YP_003543219.1| 50S ribosomal protein L28P [Candidatus Sulcia muelleri DMIN] gi|189029460|sp|A8Z5S7|RL28_SULMW RecName: Full=50S ribosomal protein L28 gi|152206168|gb|ABS30478.1| 50S ribosomal subunit protein L28 [Candidatus Sulcia muelleri GWSS] gi|292667720|gb|ADE35355.1| LSU ribosomal protein L28P [Candidatus Sulcia muelleri DMIN] Length = 77 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS++C++T K M GNKVSHANNKT+R F NL + I ++ L++S ++++ Sbjct: 1 MSKLCQITGKKPMMGNKVSHANNKTKRIFNLNLSKKRFF--IKKKWILLKVSSAGIKTIN 58 Query: 61 RQG 63 + G Sbjct: 59 KFG 61 >gi|260654969|ref|ZP_05860457.1| ribosomal protein L28 [Jonquetella anthropi E3_33 E1] gi|260630284|gb|EEX48478.1| ribosomal protein L28 [Jonquetella anthropi E3_33 E1] Length = 68 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC+ + +GN++SH++ +TRRR+ NL + + + +++I LRS Sbjct: 1 MSKVCDCCGRGPATGNQISHSHRRTRRRWQINLQNVRVDLGA-GETRKMKICAHCLRS 57 >gi|90994415|ref|YP_536905.1| ribosomal protein L28 [Porphyra yezoensis] gi|122194727|sp|Q1XDR3|RK28_PORYE RecName: Full=50S ribosomal protein L28, chloroplastic gi|90818979|dbj|BAE92348.1| 50S ribosomal protein L28 [Porphyra yezoensis] Length = 63 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 33/59 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 MS+ C+LT K +G VSH++ +T++ NL + S + ++ IS A++++ Sbjct: 1 MSKKCQLTGKVANNGYAVSHSHKRTKKLQKVNLQHKKVWSSGQNKWVKMLISTKAIKTL 59 >gi|196014954|ref|XP_002117335.1| hypothetical protein TRIADDRAFT_61404 [Trichoplax adhaerens] gi|190580088|gb|EDV20174.1| hypothetical protein TRIADDRAFT_61404 [Trichoplax adhaerens] Length = 254 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 2 SRVCELTKKTVMSGN-KVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 S+ + V+SG +K +R++ PN+ + L SDI++Q ++ + AL+ +E Sbjct: 19 SQKGLWGGEGVVSGYYTTKRRKHKIKRKWHPNVQTMKLFSDILDQTLRVPTTMSALKQIE 78 Query: 61 RQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 R G LD ++ + + L S LR +IL ++ Sbjct: 79 RAGSLDNYILRTPDKQLNSEFAFDLRKKILSRV 111 >gi|108562892|ref|YP_627208.1| 50S ribosomal protein L28 [Helicobacter pylori HPAG1] gi|122386623|sp|Q1CU38|RL28_HELPH RecName: Full=50S ribosomal protein L28 gi|107836665|gb|ABF84534.1| ribosomal protein L28 [Helicobacter pylori HPAG1] Length = 62 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGPMVGNHVSHANNKNKRRSLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|291320036|ref|YP_003515294.1| 50S ribosomal protein L28 [Mycoplasma agalactiae] gi|290752365|emb|CBH40336.1| 50S ribosomal protein L28 [Mycoplasma agalactiae] Length = 68 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +L K + GN SH+ T+R+F NL +IT+ S LR+S +++++ Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITITS-SNGTPTTLRVSAKTIKTLK 59 Query: 61 RQGGL 65 R+G L Sbjct: 60 RKGIL 64 >gi|207109912|ref|ZP_03244074.1| 50S ribosomal protein L28 [Helicobacter pylori HPKX_438_CA4C1] Length = 61 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGPMVGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|172057926|ref|YP_001814386.1| 50S ribosomal protein L28 [Exiguobacterium sibiricum 255-15] gi|226694798|sp|B1YIP3|RL28_EXIS2 RecName: Full=50S ribosomal protein L28 gi|171990447|gb|ACB61369.1| ribosomal protein L28 [Exiguobacterium sibiricum 255-15] Length = 62 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K+ SGN SHA NKT+R + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCYVTGKSPKSGNNRSHALNKTKRTWGINVQKVRILVD--GKPKKVWVSARALKS 56 >gi|269122247|ref|YP_003310424.1| ribosomal protein L28 [Sebaldella termitidis ATCC 33386] gi|268616125|gb|ACZ10493.1| ribosomal protein L28 [Sebaldella termitidis ATCC 33386] Length = 87 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 ++CE+ K V GN VSH++ T+R + PNL +T+ D + ++R+ A+++++ + Sbjct: 2 KICEVFGKKVGHGNLVSHSHRSTKRIWRPNLQVMTINVD--GKDVRVRVCTKAMKTLKGK 59 Query: 63 GGLDRF--LSNSKKENLSARMRTL 84 D+ + K NLS ++ + Sbjct: 60 NP-DQVKKILMENKNNLSPKLSKV 82 >gi|317480045|ref|ZP_07939157.1| ribosomal L28 family protein [Bacteroides sp. 4_1_36] gi|316903787|gb|EFV25629.1| ribosomal L28 family protein [Bacteroides sp. 4_1_36] Length = 74 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 M GN VSH+ +T+R F NL + L I LR + ++G LD L ++ Sbjct: 1 MIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSICANGLRIINKKG-LDAALKDA 59 Query: 73 KKE 75 + Sbjct: 60 VAK 62 >gi|261838262|gb|ACX98028.1| ribosomal protein L28 [Helicobacter pylori 51] Length = 62 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCTLTFKGPMVGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|289422328|ref|ZP_06424178.1| ribosomal protein L28 [Peptostreptococcus anaerobius 653-L] gi|289157273|gb|EFD05888.1| ribosomal protein L28 [Peptostreptococcus anaerobius 653-L] Length = 62 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC + K +SGN+VSH+N +R + NL + ++ D + ++ + LRS Sbjct: 1 MSKVCSVCGKGKVSGNQVSHSNKHNKRSWSANLRNVKIVEDGTPK--RVSVCTRCLRS 56 >gi|332976655|gb|EGK13496.1| 50S ribosomal protein L28 [Desmospora sp. 8437] Length = 62 Score = 60.8 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K +GN+VSH++ K+RR++ N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARRCYITGKEGRTGNQVSHSHRKSRRKWGANVQKVRILVD--GKPKRVYVSTKALKS 56 >gi|323342149|ref|ZP_08082382.1| 50S ribosomal protein L28 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464574|gb|EFY09767.1| 50S ribosomal protein L28 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 86 Score = 60.8 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M RVC ++ K +SGNK SH+ TRR++ NL T++ D + ++RIS AL+S++ Sbjct: 24 MPRVCSVSGKKTLSGNKRSHSLRATRRKWNVNLQNATIMVD--GKPTRVRISARALKSLK 81 >gi|310779632|ref|YP_003967965.1| LSU ribosomal protein L28P [Ilyobacter polytropus DSM 2926] gi|309748955|gb|ADO83617.1| LSU ribosomal protein L28P [Ilyobacter polytropus DSM 2926] Length = 85 Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE++ K + G++VSH++ T R + PNL ++ I + ++++ L++++ Sbjct: 2 KRCEISGKGMTFGHQVSHSHRCTNRVWKPNLQPTKIV--INGEAVKVKVCSKMLKTLKGA 59 Query: 63 GGLDRF-LSNSKKENLSARMRT 83 + + S + LS ++ Sbjct: 60 NEAETLNILKSNAKTLSPKIAK 81 >gi|15611510|ref|NP_223161.1| 50S ribosomal protein L28 [Helicobacter pylori J99] gi|15645118|ref|NP_207288.1| 50S ribosomal protein L28 [Helicobacter pylori 26695] gi|210134694|ref|YP_002301133.1| 50S ribosomal protein L28 [Helicobacter pylori P12] gi|54039147|sp|P66143|RL28_HELPJ RecName: Full=50S ribosomal protein L28 gi|54041847|sp|P66142|RL28_HELPY RecName: Full=50S ribosomal protein L28 gi|226694945|sp|B6JL75|RL28_HELP2 RecName: Full=50S ribosomal protein L28 gi|2313612|gb|AAD07567.1| ribosomal protein L28 (rpL28) [Helicobacter pylori 26695] gi|4154978|gb|AAD06021.1| 50S RIBOSOMAL PROTEIN L28 [Helicobacter pylori J99] gi|210132662|gb|ACJ07653.1| 50S ribosomal protein L28 [Helicobacter pylori P12] gi|317009530|gb|ADU80110.1| 50S ribosomal protein L28 [Helicobacter pylori India7] gi|317012309|gb|ADU82917.1| 50S ribosomal protein L28 [Helicobacter pylori Lithuania75] gi|317013910|gb|ADU81346.1| 50S ribosomal protein L28 [Helicobacter pylori Gambia94/24] gi|317180268|dbj|BAJ58054.1| 50S ribosomal protein L28 [Helicobacter pylori F32] Length = 62 Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGPMIGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|317057425|ref|YP_004105892.1| 50S ribosomal protein L28 [Ruminococcus albus 7] gi|315449694|gb|ADU23258.1| ribosomal protein L28 [Ruminococcus albus 7] Length = 61 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K V G KVSH++ +T R + PN+ R+ + + + LRS Sbjct: 1 MAK-CEVCGKGVTFGIKVSHSHRRTNRTWKPNVKRVKAVVNGTPTHV--YVCSRCLRS 55 >gi|242309014|ref|ZP_04808169.1| 50S ribosomal protein L28 [Helicobacter pullorum MIT 98-5489] gi|239524438|gb|EEQ64304.1| 50S ribosomal protein L28 [Helicobacter pullorum MIT 98-5489] Length = 62 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C + K M GN VSHANNKT++R LPNL + + + ++RI+ LR+++ Sbjct: 1 MAKRCFFSGKGPMVGNNVSHANNKTKKRSLPNLRVVRIKLED-GTSAKVRIAASTLRTMK 59 Query: 61 RQ 62 ++ Sbjct: 60 KR 61 >gi|299144500|ref|ZP_07037579.1| ribosomal protein L28 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517588|gb|EFI41328.1| ribosomal protein L28 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 63 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ CE+ K GN +S ++ + R + PN+ + I I Q ++ + LRS Sbjct: 1 MSKKCEICGKQKTFGNTISFSHKRGNRSWSPNIRSVRAI--INGQHRKINVCTRCLRS 56 >gi|260891095|ref|ZP_05902358.1| ribosomal protein L28 [Leptotrichia hofstadii F0254] gi|260859122|gb|EEX73622.1| ribosomal protein L28 [Leptotrichia hofstadii F0254] Length = 99 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+ KTV GN+VSH++ T+R + PNL + L I ++ ++R+ A+++++ + Sbjct: 16 QRCEVFGKTVSHGNRVSHSHRATKRIWRPNLQTMLLT--INNEEVRVRVCTKAMKTLKGK 73 Query: 63 GG--LDRFLSNSKKENLSARMRTL 84 + + L +K+ LS ++ + Sbjct: 74 NADQVKKILLKNKET-LSPKILKV 96 >gi|297697643|ref|XP_002825958.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like isoform 1 [Pongo abelii] gi|297697645|ref|XP_002825959.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like isoform 2 [Pongo abelii] Length = 148 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 2 SRVCELTKKTVMSGNKVSHANN---KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 S+ + + G ++ + + ++ + P L L S+I+++K+ + ++ L Sbjct: 75 SQRGLWGGEGWIRGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFTVTVTMRTLDL 134 Query: 59 VERQGGLDRFLSNS 72 ++ GLD ++ + Sbjct: 135 IDEAYGLDFYILKA 148 >gi|20807938|ref|NP_623109.1| ribosomal protein L28 [Thermoanaerobacter tengcongensis MB4] gi|22096044|sp|Q8R9U1|RL28_THETN RecName: Full=50S ribosomal protein L28 gi|20516508|gb|AAM24713.1| Ribosomal protein L28 [Thermoanaerobacter tengcongensis MB4] Length = 62 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 C++ K + G + SH+N +T RR+ PN+ ++ I D L + L+ Sbjct: 3 KCDICGKGSIRGFQYSHSNRRTIRRWKPNIRKVRAIVD--GTHVTLNVCAKCLK 54 >gi|126700181|ref|YP_001089078.1| 50S ribosomal protein L28 [Clostridium difficile 630] gi|255101725|ref|ZP_05330702.1| 50S ribosomal protein L28 [Clostridium difficile QCD-63q42] gi|255307594|ref|ZP_05351765.1| 50S ribosomal protein L28 [Clostridium difficile ATCC 43255] gi|255656541|ref|ZP_05401950.1| 50S ribosomal protein L28 [Clostridium difficile QCD-23m63] gi|296450008|ref|ZP_06891772.1| 50S ribosomal protein L28 [Clostridium difficile NAP08] gi|296878389|ref|ZP_06902397.1| 50S ribosomal protein L28 [Clostridium difficile NAP07] gi|122973635|sp|Q182Q0|RL28_CLOD6 RecName: Full=50S ribosomal protein L28 gi|115251618|emb|CAJ69451.1| 50S ribosomal protein L28 [Clostridium difficile] gi|296261278|gb|EFH08109.1| 50S ribosomal protein L28 [Clostridium difficile NAP08] gi|296430687|gb|EFH16526.1| 50S ribosomal protein L28 [Clostridium difficile NAP07] Length = 62 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC + K +SGN+VSH+N +R + NL + I D ++++ LRS Sbjct: 1 MAKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIID--GAPKRVKVCTRCLRS 56 >gi|29840217|ref|NP_829323.1| 50S ribosomal protein L28 [Chlamydophila caviae GPIC] gi|33301621|sp|Q823F7|RL28_CHLCV RecName: Full=50S ribosomal protein L28 gi|29834565|gb|AAP05201.1| ribosomal protein L28 [Chlamydophila caviae GPIC] Length = 89 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 14/90 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K GN + KT RRF PN+ L S + Sbjct: 1 MSRKCPLTGKRPRRGNSYTIRGIAKKKKGIGLKVTGKTPRRFFPNMITKRLWSTEENKFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL 77 +L+IS ALR +++ G L++ ++ +K + L Sbjct: 61 KLKISTSALRLIDKLG-LEKVIARAKSKGL 89 >gi|160903264|ref|YP_001568845.1| ribosomal protein L28 [Petrotoga mobilis SJ95] gi|189029448|sp|A9BGU1|RL28_PETMO RecName: Full=50S ribosomal protein L28 gi|160360908|gb|ABX32522.1| ribosomal protein L28 [Petrotoga mobilis SJ95] Length = 63 Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K+ +GN V+ + TRR + PNL +I +++D ++ + L+S Sbjct: 1 MARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDE-GTVRRMYVCTKCLKS 57 >gi|224418948|ref|ZP_03656954.1| 50S ribosomal protein L28 [Helicobacter canadensis MIT 98-5491] gi|253827896|ref|ZP_04870781.1| 50S ribosomal protein L28 [Helicobacter canadensis MIT 98-5491] gi|313142460|ref|ZP_07804653.1| 50S ribosomal protein L28 [Helicobacter canadensis MIT 98-5491] gi|253511302|gb|EES89961.1| 50S ribosomal protein L28 [Helicobacter canadensis MIT 98-5491] gi|313131491|gb|EFR49108.1| 50S ribosomal protein L28 [Helicobacter canadensis MIT 98-5491] Length = 62 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C + K M GN VSHANNKT++R LPNL + + + ++RI+ LR+++ Sbjct: 1 MAKRCVFSGKGPMVGNNVSHANNKTKKRSLPNLRVVRIKLED-GTTAKVRIAASTLRTMK 59 Query: 61 RQ 62 ++ Sbjct: 60 KR 61 >gi|308190261|ref|YP_003923192.1| 50S ribosomal protein L28 [Mycoplasma fermentans JER] gi|319777630|ref|YP_004137281.1| 50S ribosomal protein l28 [Mycoplasma fermentans M64] gi|307625003|gb|ADN69308.1| 50S ribosomal protein L28 [Mycoplasma fermentans JER] gi|318038705|gb|ADV34904.1| 50S ribosomal protein L28 [Mycoplasma fermentans M64] Length = 66 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR +LT K M GN SHA N ++R+F NL ++T+ + +K LR+S ++++ Sbjct: 1 MSRRDQLTGKGPMVGNIRSHAMNASKRKFNVNLQKVTMNVN--GKKVTLRVSAKTAKTLK 58 Query: 61 RQG 63 +G Sbjct: 59 NKG 61 >gi|307717950|ref|YP_003873482.1| 50S ribosomal protein L28 [Spirochaeta thermophila DSM 6192] gi|306531675|gb|ADN01209.1| 50S ribosomal protein L28 [Spirochaeta thermophila DSM 6192] Length = 63 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K SG VSHA+N+++R F PN+ +I ++ ++ ++I L+S Sbjct: 1 MARRCEICGKQTRSGFTVSHAHNRSKRTFKPNIQKIQIVDG--KRVRTIKICTRCLKS 56 >gi|302834607|ref|XP_002948866.1| hypothetical protein VOLCADRAFT_120673 [Volvox carteri f. nagariensis] gi|300266057|gb|EFJ50246.1| hypothetical protein VOLCADRAFT_120673 [Volvox carteri f. nagariensis] Length = 137 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 30 LPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQI 88 +P ++ L S+++++K L ++ LR +E GGLD +L + + L S L+ ++ Sbjct: 58 MPQWHKVHLYSEVLDRKVPLTMTNSTLRMIEDMGGLDSYLLKTPESKLKSDTASALKWEV 117 Query: 89 LKKMSEK 95 L + K Sbjct: 118 LTTLRRK 124 >gi|154498098|ref|ZP_02036476.1| hypothetical protein BACCAP_02079 [Bacteroides capillosus ATCC 29799] gi|150273088|gb|EDN00245.1| hypothetical protein BACCAP_02079 [Bacteroides capillosus ATCC 29799] Length = 62 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE K V+ G +VSH++ +T R + PN+ R+ I D + + LRS Sbjct: 1 MAK-CEFCDKGVVFGIQVSHSHRRTNRPWKPNVKRVKAIVDGAPKHV--YVCTRCLRS 55 >gi|315925834|ref|ZP_07922041.1| 50S ribosomal protein L28 [Pseudoramibacter alactolyticus ATCC 23263] gi|315620943|gb|EFV00917.1| 50S ribosomal protein L28 [Pseudoramibacter alactolyticus ATCC 23263] Length = 62 Score = 60.0 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C + KK+V+SGN VSH+N +R + PNL +I ++ D + + + LR Sbjct: 1 MAKECFVCKKSVVSGNTVSHSNKHNKRMWKPNLQKIKILVDGTPR--REYVCTRCLR 55 >gi|302389599|ref|YP_003825420.1| LSU ribosomal protein L28P [Thermosediminibacter oceani DSM 16646] gi|302200227|gb|ADL07797.1| LSU ribosomal protein L28P [Thermosediminibacter oceani DSM 16646] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K +G ++SH++ +T+R + PN+ R+ I D + + ++ + +RS Sbjct: 1 MAK-CEICGKVPRTGMQLSHSHIRTKRLWAPNVHRVRAIIDGVPK--RIYVCTRCMRS 55 >gi|238809981|dbj|BAH69771.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 73 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR +LT K M GN SHA N ++R+F NL ++T+ + +K LR+S ++++ Sbjct: 8 MSRRDQLTGKGPMVGNIRSHAMNASKRKFNVNLQKVTMNVN--GKKVTLRVSAKTAKTLK 65 Query: 61 RQG 63 +G Sbjct: 66 NKG 68 >gi|315452749|ref|YP_004073019.1| 50S ribosomal protein L28 [Helicobacter felis ATCC 49179] gi|315131801|emb|CBY82429.1| 50S ribosomal protein L28 [Helicobacter felis ATCC 49179] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+L+ K M GN VSHANNK++RR LPNL I + + K ++R++ LR++ Sbjct: 1 MARRCDLSLKGPMVGNHVSHANNKSKRRLLPNLRTIRITLED-GTKQKIRVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|296270746|ref|YP_003653378.1| 50S ribosomal protein L28 [Thermobispora bispora DSM 43833] gi|296093533|gb|ADG89485.1| ribosomal protein L28 [Thermobispora bispora DSM 43833] Length = 61 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K + GN +SH++ +TRRR+ PN+ R+ I +L + L+ Sbjct: 1 MAAVCDVCAKKPIFGNNISHSHRRTRRRWNPNIQRVRAK--INGTSKRLNVCTACLK 55 >gi|296133603|ref|YP_003640850.1| ribosomal protein L28 [Thermincola sp. JR] gi|296032181|gb|ADG82949.1| ribosomal protein L28 [Thermincola potens JR] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K + +G K+SH++ +T+R + PN+ ++ + + ++ + LRS Sbjct: 1 MAK-CDICGKGISTGIKLSHSHIRTKRTWSPNVQKVRALVN--GAPKKINVCTRCLRS 55 >gi|254779487|ref|YP_003057592.1| 50S ribosomal protein L28 [Helicobacter pylori B38] gi|308184272|ref|YP_003928405.1| 50S ribosomal protein L28 [Helicobacter pylori SJM180] gi|254001398|emb|CAX29389.1| 50S ribosomal subunit protein L28 [Helicobacter pylori B38] gi|307637167|gb|ADN79617.1| LSU ribosomal protein: L28p [Helicobacter pylori 908] gi|308060192|gb|ADO02088.1| 50S ribosomal protein L28 [Helicobacter pylori SJM180] gi|325995757|gb|ADZ51162.1| 50S ribosomal protein L28 [Helicobacter pylori 2018] gi|325997353|gb|ADZ49561.1| 50S ribosomal protein L28 [Helicobacter pylori 2017] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCTLTFKGPMIGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|309776524|ref|ZP_07671505.1| ribosomal protein L28 [Erysipelotrichaceae bacterium 3_1_53] gi|308915701|gb|EFP61460.1| ribosomal protein L28 [Erysipelotrichaceae bacterium 3_1_53] Length = 63 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MS+VC +T K +SGNK SH+ +RR + NL ++ ++ D + +RIS AL++++ Sbjct: 1 MSKVCAITGKGPLSGNKRSHSMRASRRNWNVNLQKVKVVVD--GKPQTIRISARALKTLK 58 Query: 61 RQGGL 65 + + Sbjct: 59 NKKAI 63 >gi|84994626|ref|XP_952035.1| 50s ribosomal subunit protein L28 [Theileria annulata strain Ankara] gi|65302196|emb|CAI74303.1| 50s ribosomal subunit protein L28, putative [Theileria annulata] Length = 429 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 3 RVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 R C L K ++SH+ KTR+ NL + + + +LRIS L++++R Sbjct: 101 RRCMLLGKMDNTKAMQISHSGVKTRKTQKLNLHWKKIWHPLRKYFIRLRISMRGLKTIKR 160 Query: 62 QGGLDR 67 G ++ Sbjct: 161 LGIVEA 166 >gi|51210004|ref|YP_063668.1| ribosomal protein L28 [Gracilaria tenuistipitata var. liui] gi|68053107|sp|Q6B8P2|RK28_GRATL RecName: Full=50S ribosomal protein L28, chloroplastic gi|50657758|gb|AAT79743.1| 50S ribosomal protein L28 [Gracilaria tenuistipitata var. liui] Length = 64 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M + C LT K +G VSH++ +T++ NL + SD ++ +++I A++S+ Sbjct: 1 MVKECTLTGKKSNNGYTVSHSHIRTKKIQHINLQTKKIWSDKQKRWIKIKICTKAIKSLH 60 Query: 61 R 61 + Sbjct: 61 K 61 >gi|297583994|ref|YP_003699774.1| 50S ribosomal protein L28 [Bacillus selenitireducens MLS10] gi|297142451|gb|ADH99208.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + +GNK SHA N T+RR+ N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCVITGRGPKTGNKRSHALNATKRRWGANVQKVRIMVD--GKPKRVYVSARALKS 56 >gi|78777799|ref|YP_394114.1| 50S ribosomal protein L28 [Sulfurimonas denitrificans DSM 1251] gi|123549874|sp|Q30Q52|RL28_SULDN RecName: Full=50S ribosomal protein L28 gi|78498339|gb|ABB44879.1| LSU ribosomal protein L28P [Sulfurimonas denitrificans DSM 1251] Length = 62 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C ++ K MSGN VSHA N+T+RRFL NL + + D +++IS LR+++ Sbjct: 1 MAKKCAISGKGPMSGNNVSHAKNRTKRRFLLNLRTVRIALDD-GTTRKIKISARELRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KN 61 >gi|221503273|gb|EEE28971.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 272 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C L K SH+ T + NL L +LR+S +R+++ Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 RQG---GLDRFLSNSKKEN 76 + G D+F N KK+ Sbjct: 204 KYGLQRAADKFGLNLKKKK 222 >gi|3746419|gb|AAC63955.1| large ribosomal protein L28 precursor [Toxoplasma gondii] gi|3746425|gb|AAC63958.1| large ribosomal protein L28 precursor [Toxoplasma gondii] gi|95007437|emb|CAJ20658.1| large ribosomal protein l28 precursor, putative [Toxoplasma gondii RH] gi|221482938|gb|EEE21269.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 272 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C L K SH+ T + NL L +LR+S +R+++ Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 RQG---GLDRFLSNSKKEN 76 + G D+F N KK+ Sbjct: 204 KYGLQRAADKFGLNLKKKK 222 >gi|329942807|ref|ZP_08291586.1| ribosomal protein L28 [Chlamydophila psittaci Cal10] gi|332287399|ref|YP_004422300.1| 50S ribosomal protein L28 [Chlamydophila psittaci 6BC] gi|313847979|emb|CBY16976.1| 50s ribosomal protein l28 [Chlamydophila psittaci RD1] gi|325506618|gb|ADZ18256.1| 50S ribosomal protein L28 [Chlamydophila psittaci 6BC] gi|328815067|gb|EGF85056.1| ribosomal protein L28 [Chlamydophila psittaci Cal10] gi|328914648|gb|AEB55481.1| ribosomal protein L28 [Chlamydophila psittaci 6BC] Length = 89 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 14/90 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K GN + KT RRF PN+ L S + Sbjct: 1 MSRKCPLTGKRPRRGNSYTIRGIAKKKKGIGLKVTGKTPRRFFPNMVTKRLWSTEENKFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL 77 +L+IS ALR +++ G L++ ++ +K + L Sbjct: 61 KLKISASALRLIDKLG-LEKVIARAKSKGL 89 >gi|237840845|ref|XP_002369720.1| 50S ribosomal protein L28, putative [Toxoplasma gondii ME49] gi|211967384|gb|EEB02580.1| 50S ribosomal protein L28, putative [Toxoplasma gondii ME49] Length = 272 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C L K SH+ T + NL L +LR+S +R+++ Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 RQG---GLDRFLSNSKKEN 76 + G D+F N KK+ Sbjct: 204 KYGLQRAADKFGLNLKKKK 222 >gi|169839015|ref|ZP_02872203.1| LSU ribosomal protein L28P [candidate division TM7 single-cell isolate TM7a] Length = 72 Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 + CE+ KTV GN+VSH++ T+R + PNL + L I ++ ++R+ A+++++ Sbjct: 16 QRCEVFGKTVSHGNRVSHSHKATKRIWRPNLQTMLLT--INNEEVRVRVCTKAMKTLK 71 >gi|148377365|ref|YP_001256241.1| 50S ribosomal protein L28 [Mycoplasma agalactiae PG2] gi|226732840|sp|A5IXN6|RL28_MYCAP RecName: Full=50S ribosomal protein L28 gi|148291411|emb|CAL58795.1| 50S ribosomal protein L28 [Mycoplasma agalactiae PG2] Length = 68 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +L K + GN SH+ T+R+F NL +IT+ + LR+S +++++ Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITIA-NSNGTPTTLRVSAKTIKTLK 59 Query: 61 RQGGL 65 R+G L Sbjct: 60 RKGIL 64 >gi|313678234|ref|YP_004055974.1| 50S ribosomal protein L28 [Mycoplasma bovis PG45] gi|312950621|gb|ADR25216.1| ribosomal protein L28 [Mycoplasma bovis PG45] Length = 68 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +L K + GN SH+ T+R+F NL +IT+ + LR+S +++++ Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITIT-NSNGTPTTLRVSAKTIKTLK 59 Query: 61 RQGGL 65 R+G L Sbjct: 60 RKGIL 64 >gi|77407549|ref|ZP_00784368.1| ribosomal protein L28 [Streptococcus agalactiae H36B] gi|77173841|gb|EAO76891.1| ribosomal protein L28 [Streptococcus agalactiae H36B] Length = 77 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ +S AL+S Sbjct: 16 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLID--GKPKKVWVSARALKS 71 >gi|84996331|ref|XP_952887.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303884|emb|CAI76263.1| hypothetical protein, conserved [Theileria annulata] Length = 278 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKY-QLRISKCALRSVERQGGLDRFLSNSKKE 75 KV ++ KTR + P + + S ++ +R++ AL ++ GG D ++ N+ E Sbjct: 60 KVPYSLKKTRIKLKPLVFKKDFESKLLNTTVPNVRVTTSALHAITSSGGFDNYILNTSPE 119 Query: 76 NLSARMRTLRSQIL 89 L ++M ++ Sbjct: 120 QLRSQMGERMRNVM 133 >gi|161511502|ref|NP_853312.2| 50S ribosomal protein L28 [Mycoplasma gallisepticum str. R(low)] gi|67461492|sp|Q7NAV5|RL28_MYCGA RecName: Full=50S ribosomal protein L28 gi|284812174|gb|AAP56880.2| 50S ribosomal protein L28 [Mycoplasma gallisepticum str. R(low)] gi|284930801|gb|ADC30740.1| 50S ribosomal protein L28 [Mycoplasma gallisepticum str. R(high)] gi|284931295|gb|ADC31233.1| 50S ribosomal protein L28 [Mycoplasma gallisepticum str. F] Length = 64 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT ++GN SHA N T+RR+ NL ++ + +D +++S +R++ Sbjct: 1 MARRDDLTGLGPLAGNNRSHALNITKRRWNLNLQKVKVKTDRG--TLTVKVSARTIRTLR 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|269123074|ref|YP_003305651.1| 50S ribosomal protein L28 [Streptobacillus moniliformis DSM 12112] gi|268314400|gb|ACZ00774.1| ribosomal protein L28 [Streptobacillus moniliformis DSM 12112] Length = 87 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 51/84 (60%), Gaps = 5/84 (5%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 ++CE+ K V GN VSH+N T+R + PNL + L+ D ++ ++R+S A+++++ + Sbjct: 2 QICEVFGKKVGHGNLVSHSNRATKRIWRPNLQTMKLMLD--GKEVKVRVSTKAMKTLKGK 59 Query: 63 GG--LDRFLSNSKKENLSARMRTL 84 + + L +K NLS+++ + Sbjct: 60 NEDQVKKILLENKD-NLSSKLAKI 82 >gi|50365043|ref|YP_053468.1| 50S ribosomal protein L28 [Mesoplasma florum L1] gi|67461398|sp|Q6F1N9|RL28_MESFL RecName: Full=50S ribosomal protein L28 gi|50363599|gb|AAT75584.1| 50S ribosomal protein L28 [Mesoplasma florum L1] Length = 66 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SGN SHA N T+R++ NL ++ ++ D + +++S LR+++ Sbjct: 1 MARKDMLTGKSALSGNSRSHALNATKRKWNLNLQKVKVM-DENGNVFTIKVSARTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|110801060|ref|YP_696420.1| 50S ribosomal protein L28 [Clostridium perfringens ATCC 13124] gi|168207260|ref|ZP_02633265.1| ribosomal protein L28 [Clostridium perfringens E str. JGS1987] gi|168210634|ref|ZP_02636259.1| ribosomal protein L28 [Clostridium perfringens B str. ATCC 3626] gi|168214210|ref|ZP_02639835.1| ribosomal protein L28 [Clostridium perfringens CPE str. F4969] gi|168217020|ref|ZP_02642645.1| ribosomal protein L28 [Clostridium perfringens NCTC 8239] gi|169342741|ref|ZP_02863781.1| ribosomal protein L28 [Clostridium perfringens C str. JGS1495] gi|182625863|ref|ZP_02953629.1| ribosomal protein L28 [Clostridium perfringens D str. JGS1721] gi|122958807|sp|Q0TPM0|RL28_CLOP1 RecName: Full=50S ribosomal protein L28 gi|110675707|gb|ABG84694.1| 50S ribosomal protein L28 [Clostridium perfringens ATCC 13124] gi|169299247|gb|EDS81317.1| ribosomal protein L28 [Clostridium perfringens C str. JGS1495] gi|170661348|gb|EDT14031.1| ribosomal protein L28 [Clostridium perfringens E str. JGS1987] gi|170711305|gb|EDT23487.1| ribosomal protein L28 [Clostridium perfringens B str. ATCC 3626] gi|170714330|gb|EDT26512.1| ribosomal protein L28 [Clostridium perfringens CPE str. F4969] gi|177908897|gb|EDT71389.1| ribosomal protein L28 [Clostridium perfringens D str. JGS1721] gi|182380915|gb|EDT78394.1| ribosomal protein L28 [Clostridium perfringens NCTC 8239] Length = 63 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G + SH++ +++R + PN+ ++ I + + LRS Sbjct: 1 MARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVH--VCTRCLRS 56 >gi|284045156|ref|YP_003395496.1| ribosomal protein L28 [Conexibacter woesei DSM 14684] gi|283949377|gb|ADB52121.1| ribosomal protein L28 [Conexibacter woesei DSM 14684] Length = 62 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M R C + K GN SH+ T+RRF PNL RI + + ++ + L+ Sbjct: 1 MPRTCHVCNKGPAFGNSRSHSRVATKRRFDPNLQRIRINDAGTAR--RVYVCTRCLK 55 >gi|282882065|ref|ZP_06290706.1| ribosomal protein L28 [Peptoniphilus lacrimalis 315-B] gi|300814532|ref|ZP_07094788.1| ribosomal protein L28 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298095|gb|EFA90550.1| ribosomal protein L28 [Peptoniphilus lacrimalis 315-B] gi|300511359|gb|EFK38603.1| ribosomal protein L28 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 63 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K + GNKVS +++K+ R + PN+ R+ I + ++ I LRS Sbjct: 1 MAKRCDICGKQKVFGNKVSFSHHKSNRSWAPNIRRVKAIVN--GSTKRINICTRCLRS 56 >gi|15639353|ref|NP_218802.1| 50S ribosomal protein L28 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025595|ref|YP_001933367.1| 50S ribosomal protein L28 [Treponema pallidum subsp. pallidum SS14] gi|4033463|sp|P96131|RL28_TREPA RecName: Full=50S ribosomal protein L28 gi|226699180|sp|B2S2V9|RL28_TREPS RecName: Full=50S ribosomal protein L28 gi|1763103|gb|AAB39650.1| ribosomal protein L28 homolog [Treponema pallidum] gi|3322639|gb|AAC65347.1| ribosomal protein L28 (rpmB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018170|gb|ACD70788.1| ribosomal protein L28 [Treponema pallidum subsp. pallidum SS14] Length = 78 Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C L K +SG VS + + +R + PNL + ++ D +RI LRS Sbjct: 1 MARRCGLCGKGTISGCAVSKSMHHCKRVWKPNLLAVRVVVD--GSALNMRICARCLRS 56 >gi|325679083|ref|ZP_08158677.1| ribosomal protein L28 [Ruminococcus albus 8] gi|324109207|gb|EGC03429.1| ribosomal protein L28 [Ruminococcus albus 8] Length = 61 Score = 59.7 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K V G KVSH++ +T R + PN+ R+ + + + + LRS Sbjct: 1 MAK-CEVCGKGVTFGIKVSHSHRRTNRSWKPNVKRVKAMVN--GSPTHVYVCSRCLRS 55 >gi|330444467|ref|YP_004377453.1| 50S ribosomal protein L28 [Chlamydophila pecorum E58] gi|328807577|gb|AEB41750.1| ribosomal protein L28 [Chlamydophila pecorum E58] Length = 89 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K GN + KT+RRF PN+ L S ++ Sbjct: 1 MSRKCPLTGKRPRCGNSYTIRGIAKKKKGIGLKTTGKTKRRFYPNMVTKRLWSTEEKRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL 77 +++IS ALR +++ G L+ + +K + L Sbjct: 61 KMKISASALRLIDKLG-LETAILRAKSKGL 89 >gi|46446300|ref|YP_007665.1| 50S ribosomal protein L28 [Candidatus Protochlamydia amoebophila UWE25] gi|67461428|sp|Q6MDF9|RL28_PARUW RecName: Full=50S ribosomal protein L28 gi|46399941|emb|CAF23390.1| putative ribosomal protein L28 [Candidatus Protochlamydia amoebophila UWE25] Length = 91 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 13/78 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+VC++T + G K + KT+RRF PNL + + + Sbjct: 1 MSKVCQVTGRKPTRGYKYAIRGIAKKKKGIGLKVTGKTKRRFQPNLFKKRIWFAEENRFI 60 Query: 48 QLRISKCALRSVERQGGL 65 L++S ALR+++R G Sbjct: 61 TLKLSTAALRTIDRLGVF 78 >gi|296125867|ref|YP_003633119.1| ribosomal protein L28 [Brachyspira murdochii DSM 12563] gi|296017683|gb|ADG70920.1| ribosomal protein L28 [Brachyspira murdochii DSM 12563] Length = 63 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+RVCE+ K +G+ VSH+N KT+R F NL I + ++ + + L+ Sbjct: 1 MARVCEICGKGKQNGHSVSHSNIKTKRSFNANLQSIRI--EVNGSAKKALVCTRCLK 55 >gi|217077375|ref|YP_002335093.1| ribosomal protein L28 [Thermosipho africanus TCF52B] gi|226699176|sp|B7ICM5|RL28_THEAB RecName: Full=50S ribosomal protein L28 gi|217037230|gb|ACJ75752.1| ribosomal protein L28 [Thermosipho africanus TCF52B] Length = 69 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCAL 56 M++ C++ K SG VSH+N +T R F PNL ++ ++ + ++ + L Sbjct: 1 MAK-CQICGKGPASGKNVSHSNRRTNRWFRPNLQKVRVLRED-GTVKRMWVCTDCL 54 >gi|326330645|ref|ZP_08196949.1| ribosomal protein L28 [Nocardioidaceae bacterium Broad-1] gi|325951486|gb|EGD43522.1| ribosomal protein L28 [Nocardioidaceae bacterium Broad-1] Length = 61 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K GN + T+RRF PN+ R+ + + + ++ + ++ Sbjct: 1 MAAVCDICDKKPGFGNNRPWSKKATKRRFDPNIQRVRAVINGTPK--RMNVCTTCIK 55 >gi|257124966|ref|YP_003163080.1| ribosomal protein L28 [Leptotrichia buccalis C-1013-b] gi|257048905|gb|ACV38089.1| ribosomal protein L28 [Leptotrichia buccalis C-1013-b] Length = 85 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + CE+ KTV GN+VSH++ T+R + PNL + L I ++ ++R+ A+++++ + Sbjct: 2 QRCEVFGKTVSHGNRVSHSHRATKRIWRPNLQTMLLT--INNEEVRVRVCTKAMKTLKGK 59 Query: 63 G--GLDRFLSNSKKENLSARMRTL 84 + + L +K+ LS ++ + Sbjct: 60 NVDQVKKILLKNKET-LSPKILKV 82 >gi|119717511|ref|YP_924476.1| 50S ribosomal protein L28P [Nocardioides sp. JS614] gi|166226591|sp|A1SLV4|RL28_NOCSJ RecName: Full=50S ribosomal protein L28 gi|119538172|gb|ABL82789.1| LSU ribosomal protein L28P [Nocardioides sp. JS614] Length = 61 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ VC++ K GN + T+RRF PN+ R+ + + +L + L+ Sbjct: 1 MAAVCDICAKKPGFGNNRPWSRKITKRRFDPNIQRVRATVNGTPK--RLNVCTGCLK 55 >gi|47458579|gb|AAT27901.1| 50S ribosomal protein l28 [Mycoplasma mobile 163K] Length = 75 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT K MSGNK SHA N T+R+F NL +I + + K ++++S ++++ Sbjct: 11 MARRDDLTNKGPMSGNKRSHALNATKRKFNLNLQKILVTLE-NGSKVKIKVSAKTAKTLK 69 Query: 61 RQG 63 +QG Sbjct: 70 KQG 72 >gi|257784666|ref|YP_003179883.1| 50S ribosomal protein L28 [Atopobium parvulum DSM 20469] gi|257473173|gb|ACV51292.1| ribosomal protein L28 [Atopobium parvulum DSM 20469] Length = 62 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC+ K ++G +SH++ R F PN+ R+T++ D Q+ ++ + L+S Sbjct: 1 MSKVCDFCGKHAVAGRSISHSHRTVARTFKPNIQRVTVVVD--GQRKKMNVCSRCLKS 56 >gi|294155875|ref|YP_003560259.1| 50S ribosomal protein L28 [Mycoplasma crocodyli MP145] gi|291600100|gb|ADE19596.1| 50S ribosomal protein L28 [Mycoplasma crocodyli MP145] Length = 63 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRV LT + +GNK SHA N T+R+F NL +I L D Q+ +R+S +++++ Sbjct: 1 MSRVDVLTGRGPQTGNKRSHALNATKRKFNVNLQKIKLNLD--GQRVTVRVSAKTIKTLK 58 Query: 61 RQG 63 +G Sbjct: 59 TKG 61 >gi|298713094|emb|CBJ48869.1| 50S ribosomal protein L28 [Ectocarpus siliculosus] Length = 129 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKTV-MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C+L K V+ ++ + + NL + + ++ +LR+S A+++++ Sbjct: 50 ARNCDLLGKKPNRKARVVTFSHKRIHKVQHLNLQWRKMYWEEGKRFVRLRLSTKAIKTID 109 Query: 61 RQG 63 + G Sbjct: 110 KYG 112 >gi|304373304|ref|YP_003856513.1| 50S ribosomal protein L28 [Mycoplasma hyorhinis HUB-1] gi|304309495|gb|ADM21975.1| 50S ribosomal protein L28 [Mycoplasma hyorhinis HUB-1] gi|330723822|gb|AEC46192.1| 50S ribosomal protein L28 [Mycoplasma hyorhinis MCLD] Length = 63 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R ++T K +SGN SHA N T+R+F NL ++ + + ++Q L++S +++ Sbjct: 1 MARKDDITGKGPLSGNNRSHALNATKRKFNLNLQKVVVEVNGVKQ--TLKVSAKTKKTLR 58 Query: 61 RQG 63 ++G Sbjct: 59 KKG 61 >gi|221194542|ref|ZP_03567599.1| ribosomal protein L28 [Atopobium rimae ATCC 49626] gi|221185446|gb|EEE17836.1| ribosomal protein L28 [Atopobium rimae ATCC 49626] Length = 62 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC+ K ++G +SH++ R F PN+ R+T++ D Q+ ++ + L+S Sbjct: 1 MSKVCDFCGKHAVAGRSISHSHRTVTRTFKPNIQRVTVVVD--GQRKKMNVCSRCLKS 56 >gi|319937597|ref|ZP_08012002.1| 50S ribosomal protein L28 [Coprobacillus sp. 29_1] gi|319807437|gb|EFW04046.1| 50S ribosomal protein L28 [Coprobacillus sp. 29_1] Length = 61 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R CE++ K MSGN SHA N +RR++ NL + T++ + + +++IS LRS+ Sbjct: 1 MARKCEVSGKGPMSGNTRSHALNASRRKWNVNLQKATILVN--GKPKKVKISARELRSLR 58 Query: 61 R 61 + Sbjct: 59 K 59 >gi|76788799|ref|YP_327885.1| 50S ribosomal protein L28 [Chlamydia trachomatis A/HAR-13] gi|123607178|sp|Q3KMT5|RL28_CHLTA RecName: Full=50S ribosomal protein L28 gi|76167329|gb|AAX50337.1| LSU ribosomal protein L28P [Chlamydia trachomatis A/HAR-13] Length = 89 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+ C LT + G + +T+RRF PN+ L S + Sbjct: 1 MSKKCALTGRKPRRGYSYAIRGISKKKKGIGLKVTGRTKRRFFPNIMTKRLWSTEENRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR V++ G LD+ ++ +K + Sbjct: 61 KLKISAAALRLVDKLG-LDQVVARAKSK 87 >gi|89898359|ref|YP_515469.1| 50S ribosomal protein L28 [Chlamydophila felis Fe/C-56] gi|123483283|sp|Q254G4|RL28_CHLFF RecName: Full=50S ribosomal protein L28 gi|89331731|dbj|BAE81324.1| 50S ribosomal protein L28 [Chlamydophila felis Fe/C-56] Length = 89 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K GN + KT+RRF PN+ L S + Sbjct: 1 MSRKCPLTGKRPRRGNSYTIRGIAKKKKGIGLKVTGKTKRRFFPNMVTKRLWSTEENKFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR +++ G L++ ++ +K + Sbjct: 61 KLKISASALRLIDKLG-LEKVIARAKSK 87 >gi|110802212|ref|YP_699020.1| 50S ribosomal protein L28 [Clostridium perfringens SM101] gi|123047305|sp|Q0SS87|RL28_CLOPS RecName: Full=50S ribosomal protein L28 gi|110682713|gb|ABG86083.1| 50S ribosomal protein L28 [Clostridium perfringens SM101] Length = 63 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G + SH++ +++R + PN+ ++ I + + LRS Sbjct: 1 MARKCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVH--VCTRCLRS 56 >gi|209554033|ref|YP_002284606.1| 50S ribosomal protein L28 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550390|ref|ZP_03771339.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|226699182|sp|B5ZB16|RL28_UREU1 RecName: Full=50S ribosomal protein L28 gi|209541534|gb|ACI59763.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379544|gb|EEH01906.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 64 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT K +SGN SHA N ++RR+ NL + T+ ++ ++ +S L++++ Sbjct: 1 MARRDQLTGKGPLSGNTRSHAMNHSKRRWNVNLQKATIKTE--NGSQRVLVSAKTLKTLK 58 Query: 61 RQ 62 + Sbjct: 59 KH 60 >gi|225620148|ref|YP_002721405.1| 50S ribosomal protein L28 [Brachyspira hyodysenteriae WA1] gi|254801504|sp|C0R0R3|RL28_BRAHW RecName: Full=50S ribosomal protein L28 gi|225214967|gb|ACN83701.1| 50S ribosomal protein L28 [Brachyspira hyodysenteriae WA1] Length = 63 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+RVCE+ K +G+ VSH+N KT+R F NL + + ++ + + ++ Sbjct: 1 MARVCEICGKGKQNGHSVSHSNIKTKRSFNANLQNVKI--EVNGSVKKALVCTKCIK 55 >gi|88770670|gb|ABD51938.1| chloroplast 50S ribosomal protein 28 [Guillardia theta] Length = 157 Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 27/60 (45%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 + C L K + VS ++ + + NL + + +LR+S A+++++ + Sbjct: 79 KECMLLGKRANNKMTVSFSHRRHHKLQNVNLQWKRIWWEEGNSFVRLRVSTKAIKTLKTK 138 >gi|303233252|ref|ZP_07319924.1| ribosomal protein L28 [Atopobium vaginae PB189-T1-4] gi|302480642|gb|EFL43730.1| ribosomal protein L28 [Atopobium vaginae PB189-T1-4] Length = 66 Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+VC+ K ++G +SH++ R+F PN+ R+T+ + + + L++ Sbjct: 1 MSKVCDFCGKHAVAGRSISHSHRTVTRKFKPNIQRVTVF--EGGKSPKKNVCTRCLKT 56 >gi|15604805|ref|NP_219589.1| 50S ribosomal protein L28 [Chlamydia trachomatis D/UW-3/CX] gi|166154307|ref|YP_001654425.1| 50S ribosomal protein L28 [Chlamydia trachomatis 434/Bu] gi|166155182|ref|YP_001653437.1| 50S ribosomal protein L28 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802518|ref|YP_002887712.1| 50S ribosomal protein L28 [Chlamydia trachomatis B/Jali20/OT] gi|237804435|ref|YP_002888589.1| 50S ribosomal protein L28 [Chlamydia trachomatis B/TZ1A828/OT] gi|255310888|ref|ZP_05353458.1| 50S ribosomal protein L28 [Chlamydia trachomatis 6276] gi|255317188|ref|ZP_05358434.1| 50S ribosomal protein L28 [Chlamydia trachomatis 6276s] gi|255506661|ref|ZP_05382300.1| 50S ribosomal protein L28 [Chlamydia trachomatis D(s)2923] gi|301335558|ref|ZP_07223802.1| 50S ribosomal protein L28 [Chlamydia trachomatis L2tet1] gi|7674271|sp|O84088|RL28_CHLTR RecName: Full=50S ribosomal protein L28 gi|226738051|sp|B0B9J4|RL28_CHLT2 RecName: Full=50S ribosomal protein L28 gi|226738053|sp|B0BB73|RL28_CHLTB RecName: Full=50S ribosomal protein L28 gi|3328482|gb|AAC67677.1| L28 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|165930295|emb|CAP03781.1| LSU ribosomal protein L28P [Chlamydia trachomatis 434/Bu] gi|165931170|emb|CAP06735.1| LSU ribosomal protein L28P [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272735|emb|CAX09639.1| LSU ribosomal protein L28P [Chlamydia trachomatis B/TZ1A828/OT] gi|231273752|emb|CAX10533.1| LSU ribosomal protein L28P [Chlamydia trachomatis B/Jali20/OT] gi|289525130|emb|CBJ14602.1| LSU ribosomal protein L28P [Chlamydia trachomatis Sweden2] gi|296434674|gb|ADH16852.1| 50S ribosomal protein L28 [Chlamydia trachomatis E/150] gi|296435603|gb|ADH17777.1| 50S ribosomal protein L28 [Chlamydia trachomatis G/9768] gi|296436527|gb|ADH18697.1| 50S ribosomal protein L28 [Chlamydia trachomatis G/11222] gi|296437463|gb|ADH19624.1| 50S ribosomal protein L28 [Chlamydia trachomatis G/11074] gi|296438391|gb|ADH20544.1| 50S ribosomal protein L28 [Chlamydia trachomatis E/11023] gi|297139962|gb|ADH96720.1| 50S ribosomal protein L28 [Chlamydia trachomatis G/9301] Length = 89 Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+ C LT + G + +T+RRF PN+ L S + Sbjct: 1 MSKKCALTGRKPRRGYSYAIRGISKKKKGIGLKVTGRTKRRFFPNMMTKRLWSTEENRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR V++ G LD+ ++ +K + Sbjct: 61 KLKISAAALRLVDKLG-LDQVVARAKSK 87 >gi|313113867|ref|ZP_07799433.1| ribosomal protein L28 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623833|gb|EFQ07222.1| ribosomal protein L28 [Faecalibacterium cf. prausnitzii KLE1255] Length = 74 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE K V G KVSH++ ++ R + PN+ R+ + + + LR Sbjct: 13 MAK-CECCGKGVAFGIKVSHSHRRSNRTWKPNVRRVKAVVEGSPKYV--YACSRCLR 66 >gi|163790816|ref|ZP_02185241.1| 50S ribosomal protein L28 [Carnobacterium sp. AT7] gi|159873884|gb|EDP67963.1| 50S ribosomal protein L28 [Carnobacterium sp. AT7] Length = 62 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T + SGN SHA NKT+R + NL ++ ++ D ++ +S AL+S Sbjct: 1 MAKECAITGRKARSGNNRSHAMNKTKRTWGANLQKVRIMVD--GSPKKVWVSARALKS 56 >gi|15618247|ref|NP_224532.1| 50S ribosomal protein L28 [Chlamydophila pneumoniae CWL029] gi|15835862|ref|NP_300386.1| 50S ribosomal protein L28 [Chlamydophila pneumoniae J138] gi|16752711|ref|NP_444978.1| 50S ribosomal protein L28 [Chlamydophila pneumoniae AR39] gi|33241672|ref|NP_876613.1| 50S ribosomal protein L28 [Chlamydophila pneumoniae TW-183] gi|7674286|sp|Q9Z8L1|RL28_CHLPN RecName: Full=50S ribosomal protein L28 gi|4376605|gb|AAD18476.1| L28 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7189354|gb|AAF38272.1| ribosomal protein L28 [Chlamydophila pneumoniae AR39] gi|8978701|dbj|BAA98537.1| L28 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236181|gb|AAP98270.1| ribosomal protein L28 [Chlamydophila pneumoniae TW-183] gi|269303204|gb|ACZ33304.1| ribosomal protein L28 [Chlamydophila pneumoniae LPCoLN] Length = 89 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 14/89 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K G + KT+RRF PN+ L S + Sbjct: 1 MSRKCPLTGKRPRRGYSYTLRGIAKKKKGIGLKVTGKTKRRFFPNMLTKRLWSTEENRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKEN 76 +L+IS ALR +++ G L++ L +K +N Sbjct: 61 KLKISASALRHIDKLG-LEKVLERAKSKN 88 >gi|260584628|ref|ZP_05852374.1| 50S ribosomal protein L28 [Granulicatella elegans ATCC 700633] gi|260157651|gb|EEW92721.1| 50S ribosomal protein L28 [Granulicatella elegans ATCC 700633] Length = 62 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +GN SHA N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRRSETGNTRSHAMNANRRTWKPNLQKVRVLID--GKPKKVWVSTRALKS 56 >gi|300869908|ref|YP_003784779.1| 50S ribosomal protein L28 [Brachyspira pilosicoli 95/1000] gi|300687607|gb|ADK30278.1| 50S ribosomal protein L28 [Brachyspira pilosicoli 95/1000] Length = 64 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+RVCE+ K +G+ VSH+N KT+R F NL I + ++ + + ++ Sbjct: 2 MARVCEICGKGKQNGHSVSHSNIKTKRSFNANLQNIKI--ELNGSTKKALVCTKCIK 56 >gi|293363601|ref|ZP_06610357.1| ribosomal protein L28 [Mycoplasma alligatoris A21JP2] gi|292552950|gb|EFF41704.1| ribosomal protein L28 [Mycoplasma alligatoris A21JP2] Length = 63 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRV LT + SGNK SHA N T+R+F NL +I L D Q+ +R+S +++++ Sbjct: 1 MSRVDVLTGRGPQSGNKRSHALNATKRKFNVNLQKIKLNMD--GQRVTVRVSAKTIKTLK 58 Query: 61 RQG 63 +G Sbjct: 59 TKG 61 >gi|224005266|ref|XP_002296284.1| RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast [Thalassiosira pseudonana CCMP1335] gi|209586316|gb|ACI65001.1| RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast [Thalassiosira pseudonana CCMP1335] Length = 77 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 3 RVCELTKKTV-MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 R C+L KT V+ ++ + + NL SD + ++ +LR+S +++V + Sbjct: 1 RACDLLGKTANRKARVVTFSHKRIHKVQQVNLQWKRFYSDDLGRQVRLRLSTKGIKTVNK 60 Query: 62 QGGLDRFLSN 71 G +D Sbjct: 61 YGSIDAAAKK 70 >gi|18310716|ref|NP_562650.1| 50S ribosomal protein L28 [Clostridium perfringens str. 13] gi|20139454|sp|Q8XJM2|RL28_CLOPE RecName: Full=50S ribosomal protein L28 gi|18145397|dbj|BAB81440.1| probable 50S ribosomal protein L28 [Clostridium perfringens str. 13] Length = 84 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R CE+ K V++G + SH++ +++R + PN+ ++ I + + LRS Sbjct: 1 MARRCEICNKGVVAGVQYSHSHRQSKRTWAPNIKKVKAIVKGTPKTVH--VCTRCLRS 56 >gi|326929290|ref|XP_003210800.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Meleagris gallopavo] Length = 181 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCR-ITLISDIMEQKYQLRISKCALRSVERQ 62 VCE N V +TR R P S+I++ K + ++ L +++ Sbjct: 17 VCEYCG---GWENAV-----RTRSRIDPRRPPSRQFYSEILDAKLTITVTMRTLDLIDQA 68 Query: 63 GGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 G D ++ + K ++ S L+ +L +++ + Sbjct: 69 YGFDFYILKTPKADMCSKLGMDLKRTMLLRLARR 102 >gi|311029983|ref|ZP_07708073.1| 50S ribosomal protein L28 [Bacillus sp. m3-13] Length = 62 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K SGN SHA N TRR + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCVITGKKTGSGNARSHAMNSTRRTWGANLQKVRILVD--GKPKRVYVSARALKS 56 >gi|108757179|ref|YP_630912.1| 50S ribosomal protein L28 [Myxococcus xanthus DK 1622] gi|108461059|gb|ABF86244.1| ribosomal protein L28 [Myxococcus xanthus DK 1622] Length = 63 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ C+L K + GN VSHANNKT++R LPNL +I ++ ++ Sbjct: 1 MAWKCDLCGKRPLVGNNVSHANNKTKKRTLPNLQKIRASV--QGSTQRVLACTRCIK 55 >gi|288553107|ref|YP_003425042.1| 50S ribosomal protein L28 [Bacillus pseudofirmus OF4] gi|288544267|gb|ADC48150.1| 50S ribosomal protein L28 [Bacillus pseudofirmus OF4] Length = 62 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K SGNK SHA NKT+RR+ N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCAITGKQAKSGNKRSHALNKTKRRWGVNVQKVRILVD--GKPKRVYVSTRALKS 56 >gi|212716753|ref|ZP_03324881.1| hypothetical protein BIFCAT_01690 [Bifidobacterium catenulatum DSM 16992] gi|225351189|ref|ZP_03742212.1| hypothetical protein BIFPSEUDO_02779 [Bifidobacterium pseudocatenulatum DSM 20438] gi|212660457|gb|EEB21032.1| hypothetical protein BIFCAT_01690 [Bifidobacterium catenulatum DSM 16992] gi|225158645|gb|EEG71887.1| hypothetical protein BIFPSEUDO_02779 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 58 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 K +G VSH++ + +R F PNL + D + ++R+ ++ Sbjct: 2 CGKGPQTGFTVSHSHIRNKRTFRPNLQPVRTTID--GENVRVRVCVKCIK 49 >gi|77411802|ref|ZP_00788137.1| ribosomal protein L28 [Streptococcus agalactiae CJB111] gi|77162137|gb|EAO73113.1| ribosomal protein L28 [Streptococcus agalactiae CJB111] Length = 71 Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ +S AL+S Sbjct: 10 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLID--GKPKKVWVSARALKS 65 >gi|315586825|gb|ADU41206.1| 50S ribosomal protein L28 [Helicobacter pylori 35A] Length = 62 Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGSMVGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|313887903|ref|ZP_07821582.1| ribosomal protein L28 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846069|gb|EFR33451.1| ribosomal protein L28 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 63 Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K GNK+S +++++ R + PN+ R+ + + + ++ + LRS Sbjct: 1 MAKRCEICGKEKSFGNKISFSHSRSNRSWSPNIRRVKAVVN--GSRKRINVCTRCLRS 56 >gi|22536314|ref|NP_687165.1| 50S ribosomal protein L28 [Streptococcus agalactiae 2603V/R] gi|25010202|ref|NP_734597.1| 50S ribosomal protein L28 [Streptococcus agalactiae NEM316] gi|76788045|ref|YP_328853.1| 50S ribosomal protein L28 [Streptococcus agalactiae A909] gi|77410284|ref|ZP_00786724.1| ribosomal protein L28 [Streptococcus agalactiae COH1] gi|329117624|ref|ZP_08246341.1| ribosomal protein L28 [Streptococcus parauberis NCFD 2020] gi|67461525|sp|Q8E268|RL28_STRA5 RecName: Full=50S ribosomal protein L28 gi|67461527|sp|Q8E7M7|RL28_STRA3 RecName: Full=50S ribosomal protein L28 gi|123602577|sp|Q3K3Q0|RL28_STRA1 RecName: Full=50S ribosomal protein L28 gi|22533137|gb|AAM99037.1|AE014197_5 ribosomal protein L28 [Streptococcus agalactiae 2603V/R] gi|23094553|emb|CAD45772.1| 50S ribosomal protein L28 [Streptococcus agalactiae NEM316] gi|76563102|gb|ABA45686.1| ribosomal protein L28 [Streptococcus agalactiae A909] gi|77171106|gb|EAO74535.1| ribosomal protein L28 [Streptococcus agalactiae COH1] gi|319744072|gb|EFV96449.1| 50S ribosomal protein L28 [Streptococcus agalactiae ATCC 13813] gi|326908029|gb|EGE54943.1| ribosomal protein L28 [Streptococcus parauberis NCFD 2020] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLID--GKPKKVWVSARALKS 56 >gi|149924129|ref|ZP_01912508.1| 50S ribosomal protein L28 [Plesiocystis pacifica SIR-1] gi|149815026|gb|EDM74584.1| 50S ribosomal protein L28 [Plesiocystis pacifica SIR-1] Length = 63 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 16 NKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSK 73 VSH++ +T++R LPNL + ++R+S +R ++++G ++ L++ + Sbjct: 1 MNVSHSHIRTKKRSLPNLRYKRYWVPSENRFVRIRVSAKGMRIIDKRG-IEAVLADMR 57 >gi|167749997|ref|ZP_02422124.1| hypothetical protein EUBSIR_00965 [Eubacterium siraeum DSM 15702] gi|167657018|gb|EDS01148.1| hypothetical protein EUBSIR_00965 [Eubacterium siraeum DSM 15702] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V G KVSH++ +T R F PN+ ++ I + ++ LRS Sbjct: 1 MAK-CDICGKGVSFGIKVSHSHRRTNRAFKPNVQKVKAIVN--GTPCRVHACSRCLRS 55 >gi|109947365|ref|YP_664593.1| 50S ribosomal protein L28 [Helicobacter acinonychis str. Sheeba] gi|123066239|sp|Q17XN2|RL28_HELAH RecName: Full=50S ribosomal protein L28 gi|109714586|emb|CAJ99594.1| 50S ribosomal protein L28 [Helicobacter acinonychis str. Sheeba] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTRRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|171910230|ref|ZP_02925700.1| 50S ribosomal protein L28 [Verrucomicrobium spinosum DSM 4136] Length = 87 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 13/78 (16%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 M+RVC+++ V SG+K+ H + +R+ PNL + + + Sbjct: 1 MARVCQISGARVTSGHKIHRSGKAKKEGGIGKHITKRVKRKIYPNLRDKRIFVAELGRWV 60 Query: 48 QLRISKCALRSVERQGGL 65 ++R++ L+++ + G Sbjct: 61 KVRVTARILKTINKVGAF 78 >gi|317132508|ref|YP_004091822.1| ribosomal protein L28 [Ethanoligenens harbinense YUAN-3] gi|315470487|gb|ADU27091.1| ribosomal protein L28 [Ethanoligenens harbinense YUAN-3] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K + G KVSH++ ++ R F PN+ R+ I + + + LRS Sbjct: 1 MAK-CDVCGKGLTFGIKVSHSHRRSNRTFRPNVKRVKAIVNGTPRHI--YVCTRCLRS 55 >gi|317495236|ref|ZP_07953606.1| ribosomal protein L28 [Gemella moribillum M424] gi|316914658|gb|EFV36134.1| ribosomal protein L28 [Gemella moribillum M424] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC +T + SGN SHA N T+R+F NL ++T++ D Q ++ +S AL+S Sbjct: 1 MAKVCYVTGRKARSGNTRSHAMNATKRKFKANLQKVTILVD--GQPKKVWVSARALKS 56 >gi|293390967|ref|ZP_06635301.1| RpmB protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951501|gb|EFE01620.1| RpmB protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 57 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 N TRRRFLPNL + + LR++ +R ++++G +D L+ + Sbjct: 1 MNATRRRFLPNLHTHRFWVESENRFVTLRLTAKGMRIIDKKG-IDAVLAEIRAR 53 >gi|15615063|ref|NP_243366.1| 50S ribosomal protein L28 [Bacillus halodurans C-125] gi|14195133|sp|Q9K9Z4|RL28_BACHD RecName: Full=50S ribosomal protein L28 gi|10175120|dbj|BAB06219.1| 50S ribosomal protein L28 [Bacillus halodurans C-125] Length = 62 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + SGNK SHA NKT+RR+ N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCYITGRQAKSGNKRSHAMNKTKRRWGANVQKVRILVD--GKPKRVYVSARALKS 56 >gi|257866564|ref|ZP_05646217.1| ribosomal protein L28 [Enterococcus casseliflavus EC30] gi|257870550|ref|ZP_05650203.1| ribosomal protein L28 [Enterococcus gallinarum EG2] gi|257872920|ref|ZP_05652573.1| ribosomal protein L28 [Enterococcus casseliflavus EC10] gi|257876168|ref|ZP_05655821.1| ribosomal protein L28 [Enterococcus casseliflavus EC20] gi|257800522|gb|EEV29550.1| ribosomal protein L28 [Enterococcus casseliflavus EC30] gi|257804714|gb|EEV33536.1| ribosomal protein L28 [Enterococcus gallinarum EG2] gi|257807084|gb|EEV35906.1| ribosomal protein L28 [Enterococcus casseliflavus EC10] gi|257810334|gb|EEV39154.1| ribosomal protein L28 [Enterococcus casseliflavus EC20] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTTSGNNRSHAMNATKRTVKPNLQKVRVMID--GKPKKVWVSTRALKS 56 >gi|291519349|emb|CBK74570.1| LSU ribosomal protein L28P [Butyrivibrio fibrisolvens 16/4] Length = 61 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ + N+ + + + +L + LRS Sbjct: 1 MAK-CAVCGKGAHFGNNVSHSHRRSNHMWKSNVKSVKCNVNGTPK--KLYVCTSCLRS 55 >gi|226313301|ref|YP_002773195.1| 50S ribosomal protein L28 [Brevibacillus brevis NBRC 100599] gi|254801343|sp|C0ZFY2|RL28_BREBN RecName: Full=50S ribosomal protein L28 gi|226096249|dbj|BAH44691.1| 50S ribosomal protein L28 [Brevibacillus brevis NBRC 100599] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K+ +GN SH+ TRR + N+ ++ ++ + + ++ +S AL+S Sbjct: 1 MARRCFVTGKSAKAGNARSHSMRATRRTWGVNVQKVRILVN--GKPKRVYVSTRALKS 56 >gi|254976152|ref|ZP_05272624.1| 50S ribosomal protein L28 [Clostridium difficile QCD-66c26] gi|255093542|ref|ZP_05323020.1| 50S ribosomal protein L28 [Clostridium difficile CIP 107932] gi|255315285|ref|ZP_05356868.1| 50S ribosomal protein L28 [Clostridium difficile QCD-76w55] gi|255517953|ref|ZP_05385629.1| 50S ribosomal protein L28 [Clostridium difficile QCD-97b34] gi|255651069|ref|ZP_05397971.1| 50S ribosomal protein L28 [Clostridium difficile QCD-37x79] gi|260684135|ref|YP_003215420.1| 50S ribosomal protein L28 [Clostridium difficile CD196] gi|260687794|ref|YP_003218928.1| 50S ribosomal protein L28 [Clostridium difficile R20291] gi|306520925|ref|ZP_07407272.1| 50S ribosomal protein L28 [Clostridium difficile QCD-32g58] gi|260210298|emb|CBA64601.1| 50S ribosomal protein L28 [Clostridium difficile CD196] gi|260213811|emb|CBE05780.1| 50S ribosomal protein L28 [Clostridium difficile R20291] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC + K +SGN+VSH+N +R + NL + I D ++++ LRS Sbjct: 1 MAKVCSVCDKGKVSGNQVSHSNKHNKRTWSANLRSVRAIID--GAPKRVKVCTRCLRS 56 >gi|13357768|ref|NP_078042.1| 50S ribosomal protein L28 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761895|ref|YP_001752291.1| 50S ribosomal protein L28 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920302|ref|ZP_02691166.2| ribosomal protein L28 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171920620|ref|ZP_02695257.2| ribosomal protein L28 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|183508787|ref|ZP_02690004.2| ribosomal protein L28 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|185178862|ref|ZP_02554859.2| ribosomal protein L28 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|186701965|ref|ZP_02554321.2| ribosomal protein L28 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|188024294|ref|ZP_02570098.2| ribosomal protein L28 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518510|ref|ZP_02556723.2| ribosomal protein L28 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524059|ref|ZP_02557270.2| ribosomal protein L28 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867708|ref|ZP_03079709.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273272|ref|ZP_03205808.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225551635|ref|ZP_03772581.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|14195152|sp|Q9PQT3|RL28_UREPA RecName: Full=50S ribosomal protein L28 gi|189029461|sp|B1AIJ7|RL28_UREP2 RecName: Full=50S ribosomal protein L28 gi|11357028|pir||C82920 ribosomal protein L28 UU209.1 [imported] - Ureaplasma urealyticum gi|6899176|gb|AAF30617.1|AE002120_9 ribosomal protein L28 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827472|gb|ACA32734.1| ribosomal protein L28 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902716|gb|EDT49005.1| ribosomal protein L28 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171903338|gb|EDT49627.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|182675732|gb|EDT87637.1| ribosomal protein L28 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|184209498|gb|EDU06541.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|186700727|gb|EDU19009.1| ribosomal protein L28 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|188018968|gb|EDU57008.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997909|gb|EDU67006.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659750|gb|EDX53130.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660563|gb|EDX53819.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249792|gb|EDY74572.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379450|gb|EEH01815.1| ribosomal protein L28 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 64 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +LT K +SGN SHA N ++RR+ NL + T+ ++ ++ +S L++++ Sbjct: 1 MAKRDQLTGKGPLSGNTRSHAMNHSKRRWNVNLQKATIKTE--NGSQRVLVSAKTLKTLK 58 Query: 61 RQ 62 + Sbjct: 59 KH 60 >gi|188585969|ref|YP_001917514.1| LSU ribosomal protein L28P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226732841|sp|B2A2L1|RL28_NATTJ RecName: Full=50S ribosomal protein L28 gi|179350656|gb|ACB84926.1| LSU ribosomal protein L28P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 63 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+ +CE+ K SG VSH+N KT+R++ N+ ++ + D + ++++ ++ Sbjct: 1 MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVD--GRPKKVKVCTQCIK 55 >gi|332685786|ref|YP_004455560.1| 50S ribosomal protein L28p [Melissococcus plutonius ATCC 35311] gi|332369795|dbj|BAK20751.1| LSU ribosomal protein L28p [Melissococcus plutonius ATCC 35311] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTRSGNNRSHAMNATKRTVKPNLQKVRVLVD--GKPKKVWVSTRALKS 56 >gi|332027514|gb|EGI67591.1| 39S ribosomal protein L28, mitochondrial [Acromyrmex echinatior] Length = 384 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 23 NKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKEN-LSARM 81 + +LP+L + + S++++ ++ I++ ALR + G D +L + + S Sbjct: 102 RRVPHFWLPSLFKSVIYSEVLDTYMRIVITQRALRLIHENYGFDHYLLKTPACDLKSLLA 161 Query: 82 RTLRSQILKKMSEK 95 L+ QIL +++K Sbjct: 162 LKLKRQILIALADK 175 >gi|325567342|ref|ZP_08144009.1| 50S ribosomal protein L28 [Enterococcus casseliflavus ATCC 12755] gi|325158775|gb|EGC70921.1| 50S ribosomal protein L28 [Enterococcus casseliflavus ATCC 12755] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTASGNNRSHAMNATKRTVKPNLQKVRVMID--GKPKKVWVSTRALKS 56 >gi|169333684|ref|ZP_02860877.1| hypothetical protein ANASTE_00068 [Anaerofustis stercorihominis DSM 17244] gi|169259678|gb|EDS73644.1| hypothetical protein ANASTE_00068 [Anaerofustis stercorihominis DSM 17244] Length = 63 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 28/46 (60%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQK 46 M + C + K + SG++VSH+N T+R + PNL ++ ++ + + Sbjct: 18 MPKECYVCGKKITSGHQVSHSNIHTKRTWKPNLKKVRIVENNTAKN 63 >gi|217032925|ref|ZP_03438401.1| hypothetical protein HPB128_10g17 [Helicobacter pylori B128] gi|298736171|ref|YP_003728697.1| 50S ribosomal protein L28 [Helicobacter pylori B8] gi|216945374|gb|EEC24044.1| hypothetical protein HPB128_10g17 [Helicobacter pylori B128] gi|298355361|emb|CBI66233.1| 50S ribosomal protein L28 [Helicobacter pylori B8] Length = 62 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C LT K M GN VSHANNK +RR LPNL I + D +++++ LR++ Sbjct: 1 MAKRCALTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDD-GTTKRIKVAASTLRTMR 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|282600952|ref|ZP_05980257.2| hypothetical protein SUBVAR_05444 [Subdoligranulum variabile DSM 15176] gi|282570135|gb|EFB75670.1| conserved domain protein [Subdoligranulum variabile DSM 15176] Length = 104 Score = 57.7 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C K V G KVSH++ ++ R + PN+ R+ I D + LRS Sbjct: 43 MAK-CSCCGKGVTFGIKVSHSHRRSNRTWNPNVKRVKAIVDGSPKYI--YACTRCLRS 97 >gi|62185070|ref|YP_219855.1| 50S ribosomal protein L28 [Chlamydophila abortus S26/3] gi|81312764|sp|Q5L637|RL28_CHLAB RecName: Full=50S ribosomal protein L28 gi|62148137|emb|CAH63894.1| 50s ribosomal protein l28 [Chlamydophila abortus S26/3] Length = 89 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 14/90 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K GN + KT R F PN+ L S + Sbjct: 1 MSRKCPLTGKRPRRGNSYTIRGIAKKKKGIGLKVTGKTPRCFFPNMVTKRLWSTEENKFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL 77 +L+IS ALR + + G L++ ++ +K ++L Sbjct: 61 KLKISASALRLINKLG-LEKVIARAKNKSL 89 >gi|161621804|ref|YP_016112.2| 50S ribosomal protein L28 [Mycoplasma mobile 163K] gi|67461415|sp|Q6KHM9|RL28_MYCMO RecName: Full=50S ribosomal protein L28 Length = 65 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT K MSGNK SHA N T+R+F NL +I + + K ++++S ++++ Sbjct: 1 MARRDDLTNKGPMSGNKRSHALNATKRKFNLNLQKILVTLE-NGSKVKIKVSAKTAKTLK 59 Query: 61 RQG 63 +QG Sbjct: 60 KQG 62 >gi|259047428|ref|ZP_05737829.1| conserved domain protein [Granulicatella adiacens ATCC 49175] gi|259035619|gb|EEW36874.1| conserved domain protein [Granulicatella adiacens ATCC 49175] Length = 64 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +GN SHA N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 3 MAKVCYFTGRRSETGNTRSHAMNANRRTWKPNLQKVRVLID--GKPKKVWVSTRALKS 58 >gi|291542261|emb|CBL15371.1| LSU ribosomal protein L28P [Ruminococcus bromii L2-63] Length = 62 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE K V G KVSH++ ++ R + PN+ R+ I D ++ LRS Sbjct: 1 MAK-CEFCGKDVKFGIKVSHSHRRSNRTWKPNVQRVKAIVD--GSPKRVYACTRCLRS 55 >gi|313890327|ref|ZP_07823959.1| ribosomal protein L28 [Streptococcus pseudoporcinus SPIN 20026] gi|332523121|ref|ZP_08399373.1| ribosomal protein L28 [Streptococcus porcinus str. Jelinkova 176] gi|313121313|gb|EFR44420.1| ribosomal protein L28 [Streptococcus pseudoporcinus SPIN 20026] gi|332314385|gb|EGJ27370.1| ribosomal protein L28 [Streptococcus porcinus str. Jelinkova 176] Length = 62 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ + + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTIMVN--GKPKKVWASARALKS 56 >gi|134299935|ref|YP_001113431.1| 50S ribosomal protein L28 [Desulfotomaculum reducens MI-1] gi|172044318|sp|A4J6A3|RL28_DESRM RecName: Full=50S ribosomal protein L28 gi|134052635|gb|ABO50606.1| LSU ribosomal protein L28P [Desulfotomaculum reducens MI-1] Length = 62 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K V G K+SH++ +T+R + PNL R+ I D ++ + LRS Sbjct: 1 MAK-CAICEKGVTVGIKLSHSHIRTKRTWNPNLQRVKAIVD--GSPKRIMVCTRCLRS 55 >gi|46190742|ref|ZP_00121026.2| COG0227: Ribosomal protein L28 [Bifidobacterium longum DJO10A] Length = 58 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 K +G VSH++ +T+R F PNL + D + +LR+ L+ Sbjct: 2 CGKGPQTGFTVSHSHRRTKRSFRPNLQSVRTTID--GENTRLRVCVKCLK 49 >gi|116514995|ref|YP_802624.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285609|sp|Q058B8|RL28_BUCCC RecName: Full=50S ribosomal protein L28 gi|116256849|gb|ABJ90531.1| 50S ribosomal protein L28 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 73 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M ++C++TKK M G SHA N T+++F N+ T ++K ++RI+K +R + Sbjct: 1 MPKICQITKKKSMLGQNRSHAMNATKKKFSLNIQYHTFWLPEKKKKIRIRITKKGIRMIN 60 Query: 61 RQG 63 + G Sbjct: 61 KFG 63 >gi|227500117|ref|ZP_03930188.1| possible ribosomal protein L28 [Anaerococcus tetradius ATCC 35098] gi|227217832|gb|EEI83129.1| possible ribosomal protein L28 [Anaerococcus tetradius ATCC 35098] Length = 62 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K SG V+ ++ + R F N+ ++ + D + L + L+S Sbjct: 1 MARACDICGKGTQSGKTVTFSHRQINRTFKANVHKVKALVDGTPK--TLNVCTKCLKS 56 >gi|257066174|ref|YP_003152430.1| 50S ribosomal protein L28 [Anaerococcus prevotii DSM 20548] gi|256798054|gb|ACV28709.1| ribosomal protein L28 [Anaerococcus prevotii DSM 20548] Length = 62 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K SG V+ ++ + R+F N+ ++ + D + + L+S Sbjct: 1 MARTCDICGKGTQSGKNVTFSHRQINRKFKANVHKVKALVDGTPKTI--NVCAKCLKS 56 >gi|30021946|ref|NP_833577.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 14579] gi|42782950|ref|NP_980197.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 10987] gi|49478419|ref|YP_037919.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141630|ref|YP_085199.1| 50S ribosomal protein L28 [Bacillus cereus E33L] gi|118479080|ref|YP_896231.1| 50S ribosomal protein L28 [Bacillus thuringiensis str. Al Hakam] gi|163941596|ref|YP_001646480.1| 50S ribosomal protein L28 [Bacillus weihenstephanensis KBAB4] gi|196035826|ref|ZP_03103228.1| ribosomal protein L28 [Bacillus cereus W] gi|196038841|ref|ZP_03106149.1| ribosomal protein L28 [Bacillus cereus NVH0597-99] gi|196047440|ref|ZP_03114652.1| ribosomal protein L28 [Bacillus cereus 03BB108] gi|206971109|ref|ZP_03232060.1| 50S ribosomal protein L28 [Bacillus cereus AH1134] gi|206976773|ref|ZP_03237677.1| 50S ribosomal protein L28 [Bacillus cereus H3081.97] gi|217961278|ref|YP_002339846.1| 50S ribosomal protein L28 [Bacillus cereus AH187] gi|218234080|ref|YP_002368659.1| 50S ribosomal protein L28 [Bacillus cereus B4264] gi|218899011|ref|YP_002447422.1| ribosomal protein L28 [Bacillus cereus G9842] gi|218904988|ref|YP_002452822.1| ribosomal protein L28 [Bacillus cereus AH820] gi|222097303|ref|YP_002531360.1| 50S ribosomal protein l28 [Bacillus cereus Q1] gi|225865839|ref|YP_002751217.1| 50S ribosomal protein L28 [Bacillus cereus 03BB102] gi|228902362|ref|ZP_04066518.1| 50S ribosomal protein L28 [Bacillus thuringiensis IBL 4222] gi|228909683|ref|ZP_04073506.1| 50S ribosomal protein L28 [Bacillus thuringiensis IBL 200] gi|228916495|ref|ZP_04080061.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228922612|ref|ZP_04085912.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228928906|ref|ZP_04091938.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935172|ref|ZP_04097999.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228940946|ref|ZP_04103505.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228947577|ref|ZP_04109867.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228954135|ref|ZP_04116163.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960074|ref|ZP_04121738.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228966807|ref|ZP_04127851.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar sotto str. T04001] gi|228973875|ref|ZP_04134451.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980465|ref|ZP_04140775.1| 50S ribosomal protein L28 [Bacillus thuringiensis Bt407] gi|228987001|ref|ZP_04147127.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228992586|ref|ZP_04152513.1| 50S ribosomal protein L28 [Bacillus pseudomycoides DSM 12442] gi|228998634|ref|ZP_04158221.1| 50S ribosomal protein L28 [Bacillus mycoides Rock3-17] gi|229013042|ref|ZP_04170207.1| 50S ribosomal protein L28 [Bacillus mycoides DSM 2048] gi|229019055|ref|ZP_04175894.1| 50S ribosomal protein L28 [Bacillus cereus AH1273] gi|229025300|ref|ZP_04181719.1| 50S ribosomal protein L28 [Bacillus cereus AH1272] gi|229031488|ref|ZP_04187488.1| 50S ribosomal protein L28 [Bacillus cereus AH1271] gi|229047545|ref|ZP_04193135.1| 50S ribosomal protein L28 [Bacillus cereus AH676] gi|229061461|ref|ZP_04198806.1| 50S ribosomal protein L28 [Bacillus cereus AH603] gi|229071356|ref|ZP_04204579.1| 50S ribosomal protein L28 [Bacillus cereus F65185] gi|229081113|ref|ZP_04213623.1| 50S ribosomal protein L28 [Bacillus cereus Rock4-2] gi|229086411|ref|ZP_04218587.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-44] gi|229092901|ref|ZP_04224035.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-42] gi|229098327|ref|ZP_04229274.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-29] gi|229104420|ref|ZP_04235089.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-28] gi|229111329|ref|ZP_04240882.1| 50S ribosomal protein L28 [Bacillus cereus Rock1-15] gi|229117344|ref|ZP_04246722.1| 50S ribosomal protein L28 [Bacillus cereus Rock1-3] gi|229123372|ref|ZP_04252576.1| 50S ribosomal protein L28 [Bacillus cereus 95/8201] gi|229129134|ref|ZP_04258107.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-Cer4] gi|229134666|ref|ZP_04263475.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST196] gi|229140504|ref|ZP_04269059.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST26] gi|229146429|ref|ZP_04274800.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST24] gi|229152057|ref|ZP_04280252.1| 50S ribosomal protein L28 [Bacillus cereus m1550] gi|229157434|ref|ZP_04285512.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 4342] gi|229162794|ref|ZP_04290751.1| 50S ribosomal protein L28 [Bacillus cereus R309803] gi|229168598|ref|ZP_04296321.1| 50S ribosomal protein L28 [Bacillus cereus AH621] gi|229174524|ref|ZP_04302056.1| 50S ribosomal protein L28 [Bacillus cereus MM3] gi|229180134|ref|ZP_04307478.1| 50S ribosomal protein L28 [Bacillus cereus 172560W] gi|229186098|ref|ZP_04313267.1| 50S ribosomal protein L28 [Bacillus cereus BGSC 6E1] gi|229192027|ref|ZP_04318997.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 10876] gi|229197969|ref|ZP_04324683.1| 50S ribosomal protein L28 [Bacillus cereus m1293] gi|296504353|ref|YP_003666053.1| 50S ribosomal protein L28 [Bacillus thuringiensis BMB171] gi|301055349|ref|YP_003793560.1| 50S ribosomal protein L28 [Bacillus anthracis CI] gi|67461362|sp|Q636G8|RL28_BACCZ RecName: Full=50S ribosomal protein L28 gi|67461413|sp|Q6HEV7|RL28_BACHK RecName: Full=50S ribosomal protein L28 gi|67461469|sp|Q732L2|RL28_BACC1 RecName: Full=50S ribosomal protein L28 gi|67461510|sp|Q819U9|RL28_BACCR RecName: Full=50S ribosomal protein L28 gi|166226542|sp|A0RHN1|RL28_BACAH RecName: Full=50S ribosomal protein L28 gi|226738028|sp|B7JJU5|RL28_BACC0 RecName: Full=50S ribosomal protein L28 gi|226738029|sp|B7IUL7|RL28_BACC2 RecName: Full=50S ribosomal protein L28 gi|226738030|sp|B7HDY1|RL28_BACC4 RecName: Full=50S ribosomal protein L28 gi|226738031|sp|B7HLJ1|RL28_BACC7 RecName: Full=50S ribosomal protein L28 gi|226738032|sp|A9VT96|RL28_BACWK RecName: Full=50S ribosomal protein L28 gi|254801500|sp|C1EP82|RL28_BACC3 RecName: Full=50S ribosomal protein L28 gi|254801501|sp|B9IVE7|RL28_BACCQ RecName: Full=50S ribosomal protein L28 gi|29897502|gb|AAP10778.1| LSU ribosomal protein L28P [Bacillus cereus ATCC 14579] gi|42738877|gb|AAS42805.1| ribosomal protein L28 [Bacillus cereus ATCC 10987] gi|49329975|gb|AAT60621.1| ribosomal protein L28 (50S ribosomal protein L28) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975099|gb|AAU16649.1| ribosomal protein L28 (50S ribosomal protein L28) [Bacillus cereus E33L] gi|118418305|gb|ABK86724.1| LSU ribosomal protein L28P [Bacillus thuringiensis str. Al Hakam] gi|163863793|gb|ABY44852.1| ribosomal protein L28 [Bacillus weihenstephanensis KBAB4] gi|195991475|gb|EDX55441.1| ribosomal protein L28 [Bacillus cereus W] gi|196021748|gb|EDX60443.1| ribosomal protein L28 [Bacillus cereus 03BB108] gi|196030564|gb|EDX69163.1| ribosomal protein L28 [Bacillus cereus NVH0597-99] gi|206733881|gb|EDZ51052.1| 50S ribosomal protein L28 [Bacillus cereus AH1134] gi|206745083|gb|EDZ56486.1| 50S ribosomal protein L28 [Bacillus cereus H3081.97] gi|217067055|gb|ACJ81305.1| ribosomal protein L28 [Bacillus cereus AH187] gi|218162037|gb|ACK62029.1| ribosomal protein L28 [Bacillus cereus B4264] gi|218536430|gb|ACK88828.1| ribosomal protein L28 [Bacillus cereus AH820] gi|218542153|gb|ACK94547.1| ribosomal protein L28 [Bacillus cereus G9842] gi|221241361|gb|ACM14071.1| ribosomal protein L28 (50S ribosomal protein L28) [Bacillus cereus Q1] gi|225790030|gb|ACO30247.1| 50S ribosomal protein L28 [Bacillus cereus 03BB102] gi|228585448|gb|EEK43552.1| 50S ribosomal protein L28 [Bacillus cereus m1293] gi|228591578|gb|EEK49427.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 10876] gi|228597274|gb|EEK54925.1| 50S ribosomal protein L28 [Bacillus cereus BGSC 6E1] gi|228603343|gb|EEK60820.1| 50S ribosomal protein L28 [Bacillus cereus 172560W] gi|228609084|gb|EEK66374.1| 50S ribosomal protein L28 [Bacillus cereus MM3] gi|228615004|gb|EEK72106.1| 50S ribosomal protein L28 [Bacillus cereus AH621] gi|228620676|gb|EEK77545.1| 50S ribosomal protein L28 [Bacillus cereus R309803] gi|228626161|gb|EEK82910.1| 50S ribosomal protein L28 [Bacillus cereus ATCC 4342] gi|228631406|gb|EEK88040.1| 50S ribosomal protein L28 [Bacillus cereus m1550] gi|228637062|gb|EEK93521.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST24] gi|228643065|gb|EEK99341.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST26] gi|228648712|gb|EEL04738.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-ST196] gi|228654371|gb|EEL10236.1| 50S ribosomal protein L28 [Bacillus cereus BDRD-Cer4] gi|228660148|gb|EEL15784.1| 50S ribosomal protein L28 [Bacillus cereus 95/8201] gi|228666244|gb|EEL21708.1| 50S ribosomal protein L28 [Bacillus cereus Rock1-3] gi|228672105|gb|EEL27396.1| 50S ribosomal protein L28 [Bacillus cereus Rock1-15] gi|228679118|gb|EEL33326.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-28] gi|228685225|gb|EEL39156.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-29] gi|228690523|gb|EEL44306.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-42] gi|228696927|gb|EEL49736.1| 50S ribosomal protein L28 [Bacillus cereus Rock3-44] gi|228702157|gb|EEL54633.1| 50S ribosomal protein L28 [Bacillus cereus Rock4-2] gi|228711810|gb|EEL63762.1| 50S ribosomal protein L28 [Bacillus cereus F65185] gi|228717884|gb|EEL69532.1| 50S ribosomal protein L28 [Bacillus cereus AH603] gi|228723792|gb|EEL75147.1| 50S ribosomal protein L28 [Bacillus cereus AH676] gi|228729777|gb|EEL80757.1| 50S ribosomal protein L28 [Bacillus cereus AH1271] gi|228735991|gb|EEL86567.1| 50S ribosomal protein L28 [Bacillus cereus AH1272] gi|228742242|gb|EEL92403.1| 50S ribosomal protein L28 [Bacillus cereus AH1273] gi|228748296|gb|EEL98156.1| 50S ribosomal protein L28 [Bacillus mycoides DSM 2048] gi|228761102|gb|EEM10061.1| 50S ribosomal protein L28 [Bacillus mycoides Rock3-17] gi|228767220|gb|EEM15856.1| 50S ribosomal protein L28 [Bacillus pseudomycoides DSM 12442] gi|228772779|gb|EEM21219.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228779285|gb|EEM27542.1| 50S ribosomal protein L28 [Bacillus thuringiensis Bt407] gi|228785900|gb|EEM33903.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792906|gb|EEM40464.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar sotto str. T04001] gi|228799590|gb|EEM46543.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805455|gb|EEM52046.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228812097|gb|EEM58428.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228818782|gb|EEM64848.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228824537|gb|EEM70342.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830713|gb|EEM76318.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228837041|gb|EEM82382.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228843074|gb|EEM88156.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228849972|gb|EEM94803.1| 50S ribosomal protein L28 [Bacillus thuringiensis IBL 200] gi|228857260|gb|EEN01764.1| 50S ribosomal protein L28 [Bacillus thuringiensis IBL 4222] gi|296325405|gb|ADH08333.1| 50S ribosomal protein L28 [Bacillus thuringiensis BMB171] gi|300377518|gb|ADK06422.1| 50S ribosomal protein L28 [Bacillus cereus biovar anthracis str. CI] gi|324327755|gb|ADY23015.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar finitimus YBT-020] gi|326941627|gb|AEA17523.1| 50S ribosomal protein L28 [Bacillus thuringiensis serovar chinensis CT-43] Length = 62 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC +T + SGN SHA N T+R++ NL ++ + D + ++ +S AL+S Sbjct: 1 MARVCAITGRKARSGNSRSHAMNATKRKWGANLQKVRVRID--GKVQRVYVSARALKS 56 >gi|56964076|ref|YP_175807.1| 50S ribosomal protein L28 [Bacillus clausii KSM-K16] gi|67461332|sp|Q5WFL4|RL28_BACSK RecName: Full=50S ribosomal protein L28 gi|56910319|dbj|BAD64846.1| 50S ribosomal protein L28 [Bacillus clausii KSM-K16] Length = 62 Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + SGNK SHA NK++RRF N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARECYITGRKARSGNKRSHAMNKSKRRFGANVQKVRILVD--GKPKRVYVSARALKS 56 >gi|240144100|ref|ZP_04742701.1| ribosomal protein L28 [Roseburia intestinalis L1-82] gi|257203887|gb|EEV02172.1| ribosomal protein L28 [Roseburia intestinalis L1-82] gi|291536245|emb|CBL09357.1| LSU ribosomal protein L28P [Roseburia intestinalis M50/1] Length = 61 Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ R + N+ R++ + + +L + L+S Sbjct: 1 MAK-CAVCGKGAHFGNNVSHSHRRSNRMWKSNIKRVSCKVNGTPK--KLYVCASCLKS 55 >gi|153814831|ref|ZP_01967499.1| hypothetical protein RUMTOR_01046 [Ruminococcus torques ATCC 27756] gi|145847862|gb|EDK24780.1| hypothetical protein RUMTOR_01046 [Ruminococcus torques ATCC 27756] Length = 75 Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ KT + + N+ + + ++ ++ + L+S Sbjct: 15 MAK-CAICEKGAHFGNNVSHSHRKTPKMWKSNVKSVRVKTE--GGSKKMYVCTSCLKS 69 >gi|227550753|ref|ZP_03980802.1| 50S ribosomal protein L28 [Enterococcus faecium TX1330] gi|314937642|ref|ZP_07844968.1| ribosomal protein L28 [Enterococcus faecium TX0133a04] gi|314942859|ref|ZP_07849672.1| ribosomal protein L28 [Enterococcus faecium TX0133C] gi|314948005|ref|ZP_07851409.1| ribosomal protein L28 [Enterococcus faecium TX0082] gi|314950923|ref|ZP_07853992.1| ribosomal protein L28 [Enterococcus faecium TX0133A] gi|314991429|ref|ZP_07856906.1| ribosomal protein L28 [Enterococcus faecium TX0133B] gi|314995050|ref|ZP_07860170.1| ribosomal protein L28 [Enterococcus faecium TX0133a01] gi|227180071|gb|EEI61043.1| 50S ribosomal protein L28 [Enterococcus faecium TX1330] gi|313590776|gb|EFR69621.1| ribosomal protein L28 [Enterococcus faecium TX0133a01] gi|313593909|gb|EFR72754.1| ribosomal protein L28 [Enterococcus faecium TX0133B] gi|313596932|gb|EFR75777.1| ribosomal protein L28 [Enterococcus faecium TX0133A] gi|313598331|gb|EFR77176.1| ribosomal protein L28 [Enterococcus faecium TX0133C] gi|313643019|gb|EFS07599.1| ribosomal protein L28 [Enterococcus faecium TX0133a04] gi|313645603|gb|EFS10183.1| ribosomal protein L28 [Enterococcus faecium TX0082] Length = 73 Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 12 MAKVCYFTGRKTKSGNNRSHAMNSTKRTVKPNLQKVRVMVD--GKPKKVWVSTRALKS 67 >gi|328957305|ref|YP_004374691.1| 50S ribosomal protein L28 [Carnobacterium sp. 17-4] gi|328673629|gb|AEB29675.1| 50S ribosomal protein L28 [Carnobacterium sp. 17-4] Length = 62 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T + SGN SHA NK++R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKECVITGRKARSGNNRSHAMNKSKRTWGANLQKVRIMVDGTPK--KVWVSARALKS 56 >gi|223984328|ref|ZP_03634470.1| hypothetical protein HOLDEFILI_01764 [Holdemania filiformis DSM 12042] gi|223963685|gb|EEF68055.1| hypothetical protein HOLDEFILI_01764 [Holdemania filiformis DSM 12042] Length = 64 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC ++ K +SGNK SH+ + +RR++ NL ++ ++ D + ++RIS AL++++ Sbjct: 1 MSRVCAVSGKKALSGNKRSHSLHASRRKWNVNLQKVKVMVD--GKPQRIRISARALKTLK 58 >gi|319649613|ref|ZP_08003769.1| 50S ribosomal protein L28 [Bacillus sp. 2_A_57_CT2] gi|317398775|gb|EFV79457.1| 50S ribosomal protein L28 [Bacillus sp. 2_A_57_CT2] Length = 71 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M R C +T K SGN SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 10 MPRKCVVTGKKTTSGNARSHAMNANKRTWGANLQKVRILVD--GKPKRVWVSARALKS 65 >gi|332653514|ref|ZP_08419259.1| ribosomal protein L28 [Ruminococcaceae bacterium D16] gi|332518660|gb|EGJ48263.1| ribosomal protein L28 [Ruminococcaceae bacterium D16] Length = 62 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE K V G KVSH++ ++ R + PN+ R+ I + + LRS Sbjct: 1 MAK-CEFCDKGVTFGIKVSHSHRRSNRTWKPNVKRVKAIVNGTPTHV--YVCTRCLRS 55 >gi|313885147|ref|ZP_07818899.1| ribosomal protein L28 [Eremococcus coleocola ACS-139-V-Col8] gi|312619838|gb|EFR31275.1| ribosomal protein L28 [Eremococcus coleocola ACS-139-V-Col8] Length = 62 Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C T + SGN SHA N ++RRF NL ++ ++ D Q ++ +S AL+S Sbjct: 1 MAKECYYTGRKAKSGNTRSHALNASKRRFGANLQKVRIMVD--GQPKKVWVSARALKS 56 >gi|317500348|ref|ZP_07958573.1| ribosomal protein L28 [Lachnospiraceae bacterium 8_1_57FAA] gi|316898289|gb|EFV20335.1| ribosomal protein L28 [Lachnospiraceae bacterium 8_1_57FAA] Length = 75 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ KT + + N+ + + ++ ++ + L+S Sbjct: 15 MAK-CAICEKGAHFGNNVSHSHRKTPKMWKSNVKSVRVKTE--GGSKEMYVCTSCLKS 69 >gi|83319933|ref|YP_424461.1| 50S ribosomal protein L28 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535696|sp|Q2SS02|RL28_MYCCT RecName: Full=50S ribosomal protein L28 gi|83283819|gb|ABC01751.1| 50S ribosomal protein L28 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|256383718|gb|ACU78288.1| ribosomal protein L28 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384549|gb|ACU79118.1| ribosomal protein L28 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455896|gb|ADH22131.1| ribosomal protein L28 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 65 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SG SHA N T+R++ NL ++ ++ D + +++S LR+++ Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-DENGSVFNIKVSARTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|157692262|ref|YP_001486724.1| 50S ribosomal protein L28 [Bacillus pumilus SAFR-032] gi|194015123|ref|ZP_03053740.1| ribosomal protein L28 [Bacillus pumilus ATCC 7061] gi|166987909|sp|A8FD47|RL28_BACP2 RecName: Full=50S ribosomal protein L28 gi|157681020|gb|ABV62164.1| ribosomal protein L28 [Bacillus pumilus SAFR-032] gi|194014149|gb|EDW23714.1| ribosomal protein L28 [Bacillus pumilus ATCC 7061] Length = 62 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + +GN SHA N T+R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCVITGRKTKAGNNRSHAMNSTKRTWGANLQKVRILVD--GKPKRVYVSARALKS 56 >gi|315640128|ref|ZP_07895250.1| 50S ribosomal protein L28 [Enterococcus italicus DSM 15952] gi|315484105|gb|EFU74579.1| 50S ribosomal protein L28 [Enterococcus italicus DSM 15952] Length = 62 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTSSGNNRSHAMNSTKRTVKPNLQKVRVMIDGTPK--KVWVSARALKS 56 >gi|15834980|ref|NP_296739.1| 50S ribosomal protein L28 [Chlamydia muridarum Nigg] gi|270285149|ref|ZP_06194543.1| 50S ribosomal protein L28 [Chlamydia muridarum Nigg] gi|270289170|ref|ZP_06195472.1| 50S ribosomal protein L28 [Chlamydia muridarum Weiss] gi|301336544|ref|ZP_07224746.1| 50S ribosomal protein L28 [Chlamydia muridarum MopnTet14] gi|13633858|sp|Q9PKV0|RL28_CHLMU RecName: Full=50S ribosomal protein L28 gi|7190403|gb|AAF39222.1| ribosomal protein L28 [Chlamydia muridarum Nigg] Length = 89 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 14/88 (15%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+ C LT + G + +T+RRFLPN+ L S + Sbjct: 1 MSKKCALTGRKPRRGYSYAIRGISKKKKGIGLKVTGRTKRRFLPNMMTKRLWSTEENRFL 60 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKE 75 +L+IS ALR V++ G LD+ ++ +K + Sbjct: 61 KLKISAAALRLVDKLG-LDKVVARAKSK 87 >gi|30263861|ref|NP_846238.1| 50S ribosomal protein L28 [Bacillus anthracis str. Ames] gi|47529287|ref|YP_020636.1| 50S ribosomal protein L28 [Bacillus anthracis str. 'Ames Ancestor'] gi|49186708|ref|YP_029960.1| 50S ribosomal protein L28 [Bacillus anthracis str. Sterne] gi|190565852|ref|ZP_03018771.1| ribosomal protein L28 [Bacillus anthracis Tsiankovskii-I] gi|227813234|ref|YP_002813243.1| 50S ribosomal protein L28 [Bacillus anthracis str. CDC 684] gi|229604351|ref|YP_002868095.1| 50S ribosomal protein L28 [Bacillus anthracis str. A0248] gi|254683434|ref|ZP_05147294.1| 50S ribosomal protein L28 [Bacillus anthracis str. CNEVA-9066] gi|254735896|ref|ZP_05193602.1| 50S ribosomal protein L28 [Bacillus anthracis str. Western North America USA6153] gi|254739856|ref|ZP_05197549.1| 50S ribosomal protein L28 [Bacillus anthracis str. Kruger B] gi|254751046|ref|ZP_05203085.1| 50S ribosomal protein L28 [Bacillus anthracis str. Vollum] gi|254756711|ref|ZP_05208740.1| 50S ribosomal protein L28 [Bacillus anthracis str. Australia 94] gi|67461511|sp|Q81WI0|RL28_BACAN RecName: Full=50S ribosomal protein L28 gi|254801498|sp|C3P629|RL28_BACAA RecName: Full=50S ribosomal protein L28 gi|254801499|sp|C3L769|RL28_BACAC RecName: Full=50S ribosomal protein L28 gi|30258505|gb|AAP27724.1| 50S ribosomal protein L28 [Bacillus anthracis str. Ames] gi|47504435|gb|AAT33111.1| ribosomal protein L28 [Bacillus anthracis str. 'Ames Ancestor'] gi|49180635|gb|AAT56011.1| ribosomal protein L28 [Bacillus anthracis str. Sterne] gi|190562771|gb|EDV16737.1| ribosomal protein L28 [Bacillus anthracis Tsiankovskii-I] gi|227002502|gb|ACP12245.1| 50S ribosomal protein L28 [Bacillus anthracis str. CDC 684] gi|229268759|gb|ACQ50396.1| 50S ribosomal protein L28 [Bacillus anthracis str. A0248] Length = 62 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC +T + SGN SHA N T+R++ NL ++ + D + ++ +S AL+S Sbjct: 1 MARVCTITGRKARSGNSRSHAMNATKRKWGANLQKVRVRID--GKVQRVYVSARALKS 56 >gi|313665374|ref|YP_004047245.1| ribosomal protein L28 [Mycoplasma leachii PG50] gi|312949805|gb|ADR24401.1| ribosomal protein L28 [Mycoplasma leachii PG50] Length = 65 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SG SHA N T+R++ NL ++ + D + +++S LR+++ Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRV-IDENGSVFNIKVSARTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|154148353|ref|YP_001406344.1| ribosomal protein L28 [Campylobacter hominis ATCC BAA-381] gi|166226558|sp|A7I1F3|RL28_CAMHC RecName: Full=50S ribosomal protein L28 gi|153804362|gb|ABS51369.1| ribosomal protein L28 [Campylobacter hominis ATCC BAA-381] Length = 63 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR C +T K+ M+G+ VSHANNKT+++F NL I + + +++++ LR+++ Sbjct: 1 MSRRCAITGKSAMNGHSVSHANNKTKKKFGVNLRTIRIKLED-GSTTKIKVAASTLRTMK 59 Query: 61 RQ 62 + Sbjct: 60 KA 61 >gi|222152512|ref|YP_002561687.1| 50S ribosomal protein L28 [Streptococcus uberis 0140J] gi|319939717|ref|ZP_08014075.1| 50S ribosomal protein L28 [Streptococcus anginosus 1_2_62CV] gi|254801380|sp|B9DTK1|RL28_STRU0 RecName: Full=50S ribosomal protein L28 gi|222113323|emb|CAR40906.1| 50S ribosomal protein L28 [Streptococcus uberis 0140J] gi|319811135|gb|EFW07444.1| 50S ribosomal protein L28 [Streptococcus anginosus 1_2_62CV] Length = 62 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTILVD--GKPKKVWASARALKS 56 >gi|15675704|ref|NP_269878.1| 50S ribosomal protein L28 [Streptococcus pyogenes M1 GAS] gi|19746812|ref|NP_607948.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS8232] gi|21911165|ref|NP_665433.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS315] gi|28895150|ref|NP_801500.1| 50S ribosomal protein L28 [Streptococcus pyogenes SSI-1] gi|50914961|ref|YP_060933.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS10394] gi|71904258|ref|YP_281061.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS6180] gi|71911419|ref|YP_282969.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS5005] gi|94989239|ref|YP_597340.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS9429] gi|94991184|ref|YP_599284.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS10270] gi|94993127|ref|YP_601226.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS2096] gi|94995058|ref|YP_603156.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS10750] gi|139473123|ref|YP_001127838.1| 50S ribosomal protein L28 [Streptococcus pyogenes str. Manfredo] gi|195978814|ref|YP_002124058.1| 50S ribosomal protein L28 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|209560041|ref|YP_002286513.1| 50S ribosomal protein L28 [Streptococcus pyogenes NZ131] gi|225867869|ref|YP_002743817.1| 50S ribosomal protein L28 [Streptococcus equi subsp. zooepidemicus] gi|225871217|ref|YP_002747164.1| 50S ribosomal protein L28 [Streptococcus equi subsp. equi 4047] gi|251781759|ref|YP_002996061.1| 50S ribosomal protein L28 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|306826665|ref|ZP_07459968.1| 50S ribosomal protein L28 [Streptococcus pyogenes ATCC 10782] gi|54039153|sp|P66158|RL28_STRP3 RecName: Full=50S ribosomal protein L28 gi|54039154|sp|P66159|RL28_STRP8 RecName: Full=50S ribosomal protein L28 gi|54041853|sp|P66157|RL28_STRP1 RecName: Full=50S ribosomal protein L28 gi|67461343|sp|Q5XA13|RL28_STRP6 RecName: Full=50S ribosomal protein L28 gi|123639246|sp|Q48RF4|RL28_STRPM RecName: Full=50S ribosomal protein L28 gi|166228157|sp|Q1J9X9|RL28_STRPB RecName: Full=50S ribosomal protein L28 gi|166228158|sp|Q1JK27|RL28_STRPC RecName: Full=50S ribosomal protein L28 gi|166228159|sp|Q1JF19|RL28_STRPD RecName: Full=50S ribosomal protein L28 gi|166228160|sp|Q1J4X4|RL28_STRPF RecName: Full=50S ribosomal protein L28 gi|166228161|sp|A2RCL6|RL28_STRPG RecName: Full=50S ribosomal protein L28 gi|226699167|sp|B4U4X8|RL28_STREM RecName: Full=50S ribosomal protein L28 gi|226699173|sp|B5XIF6|RL28_STRPZ RecName: Full=50S ribosomal protein L28 gi|254801377|sp|C0M8K2|RL28_STRE4 RecName: Full=50S ribosomal protein L28 gi|259646750|sp|C0MFR4|RL28_STRS7 RecName: Full=50S ribosomal protein L28 gi|13622921|gb|AAK34599.1| 50S ribosomal protein L28 [Streptococcus pyogenes M1 GAS] gi|15425743|dbj|BAB64349.1| ribosome protein L28 [Streptococcus pyogenes] gi|19749048|gb|AAL98447.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS8232] gi|21905376|gb|AAM80236.1| 50S ribosomal protein L28 [Streptococcus pyogenes MGAS315] gi|28810395|dbj|BAC63333.1| 50S ribosomal protein L28 [Streptococcus pyogenes SSI-1] gi|50904035|gb|AAT87750.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS10394] gi|71803353|gb|AAX72706.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS6180] gi|71854201|gb|AAZ52224.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS5005] gi|94542747|gb|ABF32796.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS9429] gi|94544692|gb|ABF34740.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS10270] gi|94546635|gb|ABF36682.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS2096] gi|94548566|gb|ABF38612.1| LSU ribosomal protein L28P [Streptococcus pyogenes MGAS10750] gi|134271369|emb|CAM29589.1| 50S ribosomal protein L28 [Streptococcus pyogenes str. Manfredo] gi|195975519|gb|ACG63045.1| 50S ribosomal protein L28 RpmB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|209541242|gb|ACI61818.1| LSU ribosomal protein L28p [Streptococcus pyogenes NZ131] gi|225700621|emb|CAW95165.1| 50S ribosomal protein L28 [Streptococcus equi subsp. equi 4047] gi|225701145|emb|CAW98026.1| 50S ribosomal protein L28 [Streptococcus equi subsp. zooepidemicus] gi|242390388|dbj|BAH80847.1| 50S ribosomal protein L28 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|304431113|gb|EFM34119.1| 50S ribosomal protein L28 [Streptococcus pyogenes ATCC 10782] gi|322411097|gb|EFY02005.1| 50S ribosomal protein L28 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323126564|gb|ADX23861.1| 50S ribosomal protein L28 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 62 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTILVD--GKPKKVWASARALKS 56 >gi|187735683|ref|YP_001877795.1| ribosomal protein L28 [Akkermansia muciniphila ATCC BAA-835] gi|226738022|sp|B2URC9|RL28_AKKM8 RecName: Full=50S ribosomal protein L28 gi|187425735|gb|ACD05014.1| ribosomal protein L28 [Akkermansia muciniphila ATCC BAA-835] Length = 87 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 13/76 (17%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR+C + G ++ H R PNL + + Q Sbjct: 1 MSRICIIRGTMPHKGRRIHRSGLAKKKGGIGRHVTKTVNRTVFPNLQEKRIWVPELGQFV 60 Query: 48 QLRISKCALRSVERQG 63 +++IS ALR++ + G Sbjct: 61 KMKISAKALRTINKNG 76 >gi|331703482|ref|YP_004400169.1| 50S ribosomal protein L28 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802037|emb|CBW54191.1| 50S ribosomal protein L28 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 68 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SG SHA N T+R++ NL ++ ++ D + +++S LR+++ Sbjct: 4 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-DENGSVFNIKVSARTLRTLK 62 Query: 61 R 61 + Sbjct: 63 K 63 >gi|29377572|ref|NP_816726.1| 50S ribosomal protein L28 [Enterococcus faecalis V583] gi|227517277|ref|ZP_03947326.1| 50S ribosomal protein L28 [Enterococcus faecalis TX0104] gi|227554536|ref|ZP_03984583.1| 50S ribosomal protein L28 [Enterococcus faecalis HH22] gi|229547459|ref|ZP_04436184.1| 50S ribosomal protein L28 [Enterococcus faecalis TX1322] gi|229548028|ref|ZP_04436753.1| 50S ribosomal protein L28 [Enterococcus faecalis ATCC 29200] gi|255970692|ref|ZP_05421278.1| ribosomal protein L28 [Enterococcus faecalis T1] gi|255974272|ref|ZP_05424858.1| ribosomal protein L28 [Enterococcus faecalis T2] gi|256618130|ref|ZP_05474976.1| ribosomal protein L28 [Enterococcus faecalis ATCC 4200] gi|256761059|ref|ZP_05501639.1| ribosomal protein L28 [Enterococcus faecalis T3] gi|256854787|ref|ZP_05560151.1| ribosomal protein L28 [Enterococcus faecalis T8] gi|256958393|ref|ZP_05562564.1| ribosomal protein L28 [Enterococcus faecalis DS5] gi|256960462|ref|ZP_05564633.1| 50S ribosomal protein L28 [Enterococcus faecalis Merz96] gi|256962955|ref|ZP_05567126.1| 50S ribosomal protein L28 [Enterococcus faecalis HIP11704] gi|257078297|ref|ZP_05572658.1| 50S ribosomal protein L28 [Enterococcus faecalis JH1] gi|257080485|ref|ZP_05574846.1| 50S ribosomal protein L28 [Enterococcus faecalis E1Sol] gi|257083210|ref|ZP_05577571.1| 50S ribosomal protein L28 [Enterococcus faecalis Fly1] gi|257088227|ref|ZP_05582588.1| ribosomal protein L28 [Enterococcus faecalis D6] gi|257091358|ref|ZP_05585719.1| 50S ribosomal protein L28 [Enterococcus faecalis CH188] gi|257417241|ref|ZP_05594235.1| ribosomal protein L28 [Enterococcus faecalis AR01/DG] gi|257417960|ref|ZP_05594954.1| 50S ribosomal protein L28 [Enterococcus faecalis T11] gi|257420438|ref|ZP_05597428.1| 50S ribosomal protein L28 [Enterococcus faecalis X98] gi|293385120|ref|ZP_06630946.1| ribosomal protein L28 [Enterococcus faecalis R712] gi|293389093|ref|ZP_06633565.1| ribosomal protein L28 [Enterococcus faecalis S613] gi|294779987|ref|ZP_06745367.1| ribosomal protein L28 [Enterococcus faecalis PC1.1] gi|300861457|ref|ZP_07107541.1| ribosomal protein L28 [Enterococcus faecalis TUSoD Ef11] gi|307270569|ref|ZP_07551867.1| ribosomal protein L28 [Enterococcus faecalis TX4248] gi|307273615|ref|ZP_07554843.1| ribosomal protein L28 [Enterococcus faecalis TX0855] gi|307276663|ref|ZP_07557781.1| ribosomal protein L28 [Enterococcus faecalis TX2134] gi|307284859|ref|ZP_07565015.1| ribosomal protein L28 [Enterococcus faecalis TX0860] gi|307288881|ref|ZP_07568854.1| ribosomal protein L28 [Enterococcus faecalis TX0109] gi|307292133|ref|ZP_07571999.1| ribosomal protein L28 [Enterococcus faecalis TX0411] gi|312902134|ref|ZP_07761394.1| ribosomal protein L28 [Enterococcus faecalis TX0470] gi|312905422|ref|ZP_07764536.1| ribosomal protein L28 [Enterococcus faecalis TX0635] gi|312906696|ref|ZP_07765696.1| ribosomal protein L28 [Enterococcus faecalis DAPTO 512] gi|312910842|ref|ZP_07769678.1| ribosomal protein L28 [Enterococcus faecalis DAPTO 516] gi|312953211|ref|ZP_07772057.1| ribosomal protein L28 [Enterococcus faecalis TX0102] gi|67461513|sp|Q82ZE4|RL28_ENTFA RecName: Full=50S ribosomal protein L28 gi|29345039|gb|AAO82796.1| ribosomal protein L28 [Enterococcus faecalis V583] gi|227075284|gb|EEI13247.1| 50S ribosomal protein L28 [Enterococcus faecalis TX0104] gi|227176334|gb|EEI57306.1| 50S ribosomal protein L28 [Enterococcus faecalis HH22] gi|229306904|gb|EEN72900.1| 50S ribosomal protein L28 [Enterococcus faecalis ATCC 29200] gi|229307491|gb|EEN73478.1| 50S ribosomal protein L28 [Enterococcus faecalis TX1322] gi|255961710|gb|EET94186.1| ribosomal protein L28 [Enterococcus faecalis T1] gi|255967144|gb|EET97766.1| ribosomal protein L28 [Enterococcus faecalis T2] gi|256597657|gb|EEU16833.1| ribosomal protein L28 [Enterococcus faecalis ATCC 4200] gi|256682310|gb|EEU22005.1| ribosomal protein L28 [Enterococcus faecalis T3] gi|256710347|gb|EEU25391.1| ribosomal protein L28 [Enterococcus faecalis T8] gi|256948889|gb|EEU65521.1| ribosomal protein L28 [Enterococcus faecalis DS5] gi|256950958|gb|EEU67590.1| 50S ribosomal protein L28 [Enterococcus faecalis Merz96] gi|256953451|gb|EEU70083.1| 50S ribosomal protein L28 [Enterococcus faecalis HIP11704] gi|256986327|gb|EEU73629.1| 50S ribosomal protein L28 [Enterococcus faecalis JH1] gi|256988515|gb|EEU75817.1| 50S ribosomal protein L28 [Enterococcus faecalis E1Sol] gi|256991240|gb|EEU78542.1| 50S ribosomal protein L28 [Enterococcus faecalis Fly1] gi|256996257|gb|EEU83559.1| ribosomal protein L28 [Enterococcus faecalis D6] gi|257000170|gb|EEU86690.1| 50S ribosomal protein L28 [Enterococcus faecalis CH188] gi|257159069|gb|EEU89029.1| ribosomal protein L28 [Enterococcus faecalis ARO1/DG] gi|257159788|gb|EEU89748.1| 50S ribosomal protein L28 [Enterococcus faecalis T11] gi|257162262|gb|EEU92222.1| 50S ribosomal protein L28 [Enterococcus faecalis X98] gi|291077597|gb|EFE14961.1| ribosomal protein L28 [Enterococcus faecalis R712] gi|291081561|gb|EFE18524.1| ribosomal protein L28 [Enterococcus faecalis S613] gi|294452968|gb|EFG21390.1| ribosomal protein L28 [Enterococcus faecalis PC1.1] gi|295114427|emb|CBL33064.1| LSU ribosomal protein L28P [Enterococcus sp. 7L76] gi|300848918|gb|EFK76671.1| ribosomal protein L28 [Enterococcus faecalis TUSoD Ef11] gi|306496786|gb|EFM66337.1| ribosomal protein L28 [Enterococcus faecalis TX0411] gi|306500153|gb|EFM69497.1| ribosomal protein L28 [Enterococcus faecalis TX0109] gi|306503118|gb|EFM72375.1| ribosomal protein L28 [Enterococcus faecalis TX0860] gi|306506773|gb|EFM75925.1| ribosomal protein L28 [Enterococcus faecalis TX2134] gi|306509628|gb|EFM78670.1| ribosomal protein L28 [Enterococcus faecalis TX0855] gi|306513150|gb|EFM81784.1| ribosomal protein L28 [Enterococcus faecalis TX4248] gi|310627344|gb|EFQ10627.1| ribosomal protein L28 [Enterococcus faecalis DAPTO 512] gi|310628828|gb|EFQ12111.1| ribosomal protein L28 [Enterococcus faecalis TX0102] gi|310631151|gb|EFQ14434.1| ribosomal protein L28 [Enterococcus faecalis TX0635] gi|311288865|gb|EFQ67421.1| ribosomal protein L28 [Enterococcus faecalis DAPTO 516] gi|311290798|gb|EFQ69354.1| ribosomal protein L28 [Enterococcus faecalis TX0470] gi|315026437|gb|EFT38369.1| ribosomal protein L28 [Enterococcus faecalis TX2137] gi|315028361|gb|EFT40293.1| ribosomal protein L28 [Enterococcus faecalis TX4000] gi|315031801|gb|EFT43733.1| ribosomal protein L28 [Enterococcus faecalis TX0017] gi|315034817|gb|EFT46749.1| ribosomal protein L28 [Enterococcus faecalis TX0027] gi|315144153|gb|EFT88169.1| ribosomal protein L28 [Enterococcus faecalis TX2141] gi|315146590|gb|EFT90606.1| ribosomal protein L28 [Enterococcus faecalis TX4244] gi|315150893|gb|EFT94909.1| ribosomal protein L28 [Enterococcus faecalis TX0012] gi|315152780|gb|EFT96796.1| ribosomal protein L28 [Enterococcus faecalis TX0031] gi|315154701|gb|EFT98717.1| ribosomal protein L28 [Enterococcus faecalis TX0043] gi|315159385|gb|EFU03402.1| ribosomal protein L28 [Enterococcus faecalis TX0312] gi|315161208|gb|EFU05225.1| ribosomal protein L28 [Enterococcus faecalis TX0645] gi|315164408|gb|EFU08425.1| ribosomal protein L28 [Enterococcus faecalis TX1302] gi|315167216|gb|EFU11233.1| ribosomal protein L28 [Enterococcus faecalis TX1341] gi|315171206|gb|EFU15223.1| ribosomal protein L28 [Enterococcus faecalis TX1342] gi|315172955|gb|EFU16972.1| ribosomal protein L28 [Enterococcus faecalis TX1346] gi|315573264|gb|EFU85455.1| ribosomal protein L28 [Enterococcus faecalis TX0309B] gi|315577124|gb|EFU89315.1| ribosomal protein L28 [Enterococcus faecalis TX0630] gi|315581162|gb|EFU93353.1| ribosomal protein L28 [Enterococcus faecalis TX0309A] gi|323479044|gb|ADX78483.1| ribosomal protein L28 [Enterococcus faecalis 62] gi|327536233|gb|AEA95067.1| 50S ribosomal protein L28 [Enterococcus faecalis OG1RF] gi|329576766|gb|EGG58259.1| ribosomal protein L28 [Enterococcus faecalis TX1467] Length = 62 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTSSGNNRSHAMNSTKRTVKPNLQKVRVLID--GKPKKVWVSTRALKS 56 >gi|154685998|ref|YP_001421159.1| 50S ribosomal protein L28 [Bacillus amyloliquefaciens FZB42] gi|308173545|ref|YP_003920250.1| 50S ribosomal protein L28 [Bacillus amyloliquefaciens DSM 7] gi|166226541|sp|A7Z4K2|RL28_BACA2 RecName: Full=50S ribosomal protein L28 gi|154351849|gb|ABS73928.1| RpmB [Bacillus amyloliquefaciens FZB42] gi|307606409|emb|CBI42780.1| ribosomal protein L28 [Bacillus amyloliquefaciens DSM 7] gi|328553522|gb|AEB24014.1| 50S ribosomal protein L28 [Bacillus amyloliquefaciens TA208] gi|328911686|gb|AEB63282.1| 50S ribosomal protein L28 [Bacillus amyloliquefaciens LL3] Length = 62 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K +GN SHA N ++R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCFITGKKTKAGNNRSHAMNASKRTWGANLQKVRILVD--GKPKKVYVSARALKS 56 >gi|16078645|ref|NP_389464.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. 168] gi|221309457|ref|ZP_03591304.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. 168] gi|221313782|ref|ZP_03595587.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318706|ref|ZP_03600000.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322977|ref|ZP_03604271.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. SMY] gi|296331157|ref|ZP_06873631.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674313|ref|YP_003865985.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. spizizenii str. W23] gi|311068103|ref|YP_003973026.1| 50S ribosomal protein L28 [Bacillus atrophaeus 1942] gi|321315348|ref|YP_004207635.1| 50S ribosomal protein L28 [Bacillus subtilis BSn5] gi|585877|sp|P37807|RL28_BACSU RecName: Full=50S ribosomal protein L28 gi|143648|gb|AAC36810.1| ribosomal protein L28 [Bacillus subtilis] gi|2337811|emb|CAA74255.1| putative RpmB protein [Bacillus subtilis subsp. subtilis str. 168] gi|2633954|emb|CAB13455.1| ribosomal protein L28 [Bacillus subtilis subsp. subtilis str. 168] gi|291484133|dbj|BAI85208.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. natto BEST195] gi|296151801|gb|EFG92676.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412557|gb|ADM37676.1| 50S ribosomal protein L28 [Bacillus subtilis subsp. spizizenii str. W23] gi|310868620|gb|ADP32095.1| 50S ribosomal protein L28 [Bacillus atrophaeus 1942] gi|320021622|gb|ADV96608.1| 50S ribosomal protein L28 [Bacillus subtilis BSn5] Length = 62 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T K +GN SHA N ++R + NL ++ ++ + + ++ +S AL+S Sbjct: 1 MARKCVITGKKTTAGNNRSHAMNASKRTWGANLQKVRILVN--GKPKKVYVSARALKS 56 >gi|329770509|ref|ZP_08261887.1| 50S ribosomal protein L28 [Gemella sanguinis M325] gi|328836258|gb|EGF85927.1| 50S ribosomal protein L28 [Gemella sanguinis M325] Length = 62 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC +T + SGN SHA N ++R+F NL ++T++ D Q ++ +S AL+S Sbjct: 1 MAKVCYVTGRKARSGNTRSHAMNASKRKFKANLQKVTILVD--GQPKKVWVSARALKS 56 >gi|297620946|ref|YP_003709083.1| 50S ribosomal protein L28 [Waddlia chondrophila WSU 86-1044] gi|297376247|gb|ADI38077.1| 50S ribosomal protein L28 [Waddlia chondrophila WSU 86-1044] Length = 90 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 13/73 (17%) Query: 4 VCELTKKTVMSGNKVSHANN-------------KTRRRFLPNLCRITLISDIMEQKYQLR 50 C++T K GNK S KTRR F PN+ L ++ L+ Sbjct: 3 KCQVTGKKTTRGNKYSIRGIAKKQKGIGLNITGKTRRTFKPNIIEKKLWFPEEKRFITLK 62 Query: 51 ISKCALRSVERQG 63 +S ALR++++ G Sbjct: 63 LSTSALRTIDKVG 75 >gi|257878757|ref|ZP_05658410.1| ribosomal protein L28 [Enterococcus faecium 1,230,933] gi|257881399|ref|ZP_05661052.1| ribosomal protein L28 [Enterococcus faecium 1,231,502] gi|257885666|ref|ZP_05665319.1| ribosomal protein L28 [Enterococcus faecium 1,231,501] gi|257887989|ref|ZP_05667642.1| ribosomal protein L28 [Enterococcus faecium 1,141,733] gi|257890616|ref|ZP_05670269.1| ribosomal protein L28 [Enterococcus faecium 1,231,410] gi|257893207|ref|ZP_05672860.1| ribosomal protein L28 [Enterococcus faecium 1,231,408] gi|257896392|ref|ZP_05676045.1| ribosomal protein L28 [Enterococcus faecium Com12] gi|257899367|ref|ZP_05679020.1| ribosomal protein L28 [Enterococcus faecium Com15] gi|258615176|ref|ZP_05712946.1| 50S ribosomal protein L28 [Enterococcus faecium DO] gi|260558326|ref|ZP_05830522.1| ribosomal protein L28 [Enterococcus faecium C68] gi|261207031|ref|ZP_05921720.1| ribosomal protein L28 [Enterococcus faecium TC 6] gi|289565335|ref|ZP_06445785.1| 50S ribosomal protein L28 [Enterococcus faecium D344SRF] gi|293379478|ref|ZP_06625622.1| ribosomal protein L28 [Enterococcus faecium PC4.1] gi|293556806|ref|ZP_06675367.1| ribosomal protein L28 [Enterococcus faecium E1039] gi|293562979|ref|ZP_06677446.1| ribosomal protein L28 [Enterococcus faecium E1162] gi|293567892|ref|ZP_06679233.1| ribosomal protein L28 [Enterococcus faecium E1071] gi|293570716|ref|ZP_06681766.1| ribosomal protein L28 [Enterococcus faecium E980] gi|294615355|ref|ZP_06695228.1| ribosomal protein L28 [Enterococcus faecium E1636] gi|294618526|ref|ZP_06698088.1| ribosomal protein L28 [Enterococcus faecium E1679] gi|294622010|ref|ZP_06701154.1| ribosomal protein L28 [Enterococcus faecium U0317] gi|257812985|gb|EEV41743.1| ribosomal protein L28 [Enterococcus faecium 1,230,933] gi|257817057|gb|EEV44385.1| ribosomal protein L28 [Enterococcus faecium 1,231,502] gi|257821522|gb|EEV48652.1| ribosomal protein L28 [Enterococcus faecium 1,231,501] gi|257824043|gb|EEV50975.1| ribosomal protein L28 [Enterococcus faecium 1,141,733] gi|257826976|gb|EEV53602.1| ribosomal protein L28 [Enterococcus faecium 1,231,410] gi|257829586|gb|EEV56193.1| ribosomal protein L28 [Enterococcus faecium 1,231,408] gi|257832957|gb|EEV59378.1| ribosomal protein L28 [Enterococcus faecium Com12] gi|257837279|gb|EEV62353.1| ribosomal protein L28 [Enterococcus faecium Com15] gi|260075500|gb|EEW63806.1| ribosomal protein L28 [Enterococcus faecium C68] gi|260078659|gb|EEW66361.1| ribosomal protein L28 [Enterococcus faecium TC 6] gi|289162825|gb|EFD10675.1| 50S ribosomal protein L28 [Enterococcus faecium D344SRF] gi|291589477|gb|EFF21284.1| ribosomal protein L28 [Enterococcus faecium E1071] gi|291591729|gb|EFF23365.1| ribosomal protein L28 [Enterococcus faecium E1636] gi|291595226|gb|EFF26557.1| ribosomal protein L28 [Enterococcus faecium E1679] gi|291598437|gb|EFF29510.1| ribosomal protein L28 [Enterococcus faecium U0317] gi|291600890|gb|EFF31181.1| ribosomal protein L28 [Enterococcus faecium E1039] gi|291605105|gb|EFF34572.1| ribosomal protein L28 [Enterococcus faecium E1162] gi|291609188|gb|EFF38460.1| ribosomal protein L28 [Enterococcus faecium E980] gi|292642001|gb|EFF60167.1| ribosomal protein L28 [Enterococcus faecium PC4.1] Length = 62 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + SGN SHA N T+R PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKVCYFTGRKTKSGNNRSHAMNSTKRTVKPNLQKVRVMVD--GKPKKVWVSTRALKS 56 >gi|228478059|ref|ZP_04062670.1| ribosomal protein L28 [Streptococcus salivarius SK126] gi|312862383|ref|ZP_07722626.1| ribosomal protein L28 [Streptococcus vestibularis F0396] gi|320548007|ref|ZP_08042288.1| 50S ribosomal protein L28 [Streptococcus equinus ATCC 9812] gi|322515849|ref|ZP_08068793.1| 50S ribosomal protein L28 [Streptococcus vestibularis ATCC 49124] gi|228250239|gb|EEK09492.1| ribosomal protein L28 [Streptococcus salivarius SK126] gi|311102026|gb|EFQ60226.1| ribosomal protein L28 [Streptococcus vestibularis F0396] gi|320447353|gb|EFW88115.1| 50S ribosomal protein L28 [Streptococcus equinus ATCC 9812] gi|322125735|gb|EFX97057.1| 50S ribosomal protein L28 [Streptococcus vestibularis ATCC 49124] Length = 62 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTILVD--GKPKKVWASARALKS 56 >gi|295398475|ref|ZP_06808512.1| 50S ribosomal protein L28 [Aerococcus viridans ATCC 11563] gi|294973290|gb|EFG49080.1| 50S ribosomal protein L28 [Aerococcus viridans ATCC 11563] Length = 65 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C T + SGN SHA N T+R F NL ++ + D K ++ +S A++ Sbjct: 3 MAKECYYTGRKTTSGNNRSHALNATKRTFKANLQKVRI-IDENGNKKRVWVSARAIK 58 >gi|241889660|ref|ZP_04776958.1| ribosomal protein L28 [Gemella haemolysans ATCC 10379] gi|329766994|ref|ZP_08258522.1| 50S ribosomal protein L28 [Gemella haemolysans M341] gi|241863282|gb|EER67666.1| ribosomal protein L28 [Gemella haemolysans ATCC 10379] gi|328837719|gb|EGF87344.1| 50S ribosomal protein L28 [Gemella haemolysans M341] Length = 62 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC +T + SGN SHA N +R+F NL ++T++ D Q ++ +S AL+S Sbjct: 1 MAKVCYVTGRKARSGNTRSHAMNANKRKFKANLQKVTILVD--GQPKKVWVSARALKS 56 >gi|256544914|ref|ZP_05472285.1| 50S ribosomal protein L28 [Anaerococcus vaginalis ATCC 51170] gi|256399413|gb|EEU13019.1| 50S ribosomal protein L28 [Anaerococcus vaginalis ATCC 51170] Length = 62 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K GNKV+ ++ + R F PN+ ++ + + + ++S Sbjct: 1 MARECDICGKGTKFGNKVTFSHRRLNRNFKPNVHKLRAKVN--GSVKTINVCTKCIKS 56 >gi|126649667|ref|ZP_01721903.1| 50S ribosomal protein L28 [Bacillus sp. B14905] gi|299535929|ref|ZP_07049249.1| 50S ribosomal protein L28 [Lysinibacillus fusiformis ZC1] gi|126593386|gb|EAZ87331.1| 50S ribosomal protein L28 [Bacillus sp. B14905] gi|298728681|gb|EFI69236.1| 50S ribosomal protein L28 [Lysinibacillus fusiformis ZC1] gi|327441103|dbj|BAK17468.1| ribosomal protein L28 [Solibacillus silvestris StLB046] Length = 62 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MPKQCVITGRKARTGNNRSHAMNANKRTWGANLQKVRILVD--GKPKRVWVSARALKS 56 >gi|268610229|ref|ZP_06143956.1| 50S ribosomal protein L28 [Ruminococcus flavefaciens FD-1] Length = 61 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V G KVSH++ +T R + PN+ R+ I LRS Sbjct: 1 MAK-CDICGKGVTFGIKVSHSHRRTNRTWKPNVKRVKAIVKGTPCHI--YACSRCLRS 55 >gi|152976224|ref|YP_001375741.1| 50S ribosomal protein L28 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042424|sp|A7GRI8|RL28_BACCN RecName: Full=50S ribosomal protein L28 gi|152024976|gb|ABS22746.1| ribosomal protein L28 [Bacillus cytotoxicus NVH 391-98] Length = 62 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC +T + SGN SHA N T+R++ NL ++ + I + ++ +S AL+S Sbjct: 1 MARVCAITGRKARSGNSRSHAMNATKRKWGANLQKVRVR--INGKVQRVYVSARALKS 56 >gi|297183767|gb|ADI19891.1| hypothetical protein [uncultured alpha proteobacterium EB000_46D07] Length = 88 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/30 (70%), Positives = 27/30 (90%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFL 30 M++ C+++ KTVMSGN VSHANN+TRRRFL Sbjct: 50 MAKRCQISGKTVMSGNNVSHANNRTRRRFL 79 >gi|240047798|ref|YP_002961186.1| 50S ribosomal protein L28 [Mycoplasma conjunctivae HRC/581] gi|239985370|emb|CAT05383.1| 50S ribosomal protein L28 [Mycoplasma conjunctivae] Length = 64 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +LT K +SGN SHA N T+R+F NL ++ + + QK +L++S +++ Sbjct: 1 MARRDDLTFKGPLSGNNRSHALNATKRKFNLNLQKVVITT-SSGQKIKLKVSAKTKKTLR 59 Query: 61 RQGGL 65 +QG + Sbjct: 60 KQGHI 64 >gi|83309420|ref|YP_419684.1| ribosomal protein L28 [Magnetospirillum magneticum AMB-1] gi|82944261|dbj|BAE49125.1| Ribosomal protein L28 [Magnetospirillum magneticum AMB-1] Length = 55 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 47 YQLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKS 96 +LRIS L+++E GG+D +L + LSA R L+ +I + ++ K Sbjct: 1 MRLRISTNGLKTIEHNGGIDSYLLSIASTKLSAEARRLKKRIERALASKQ 50 >gi|212695660|ref|ZP_03303788.1| hypothetical protein ANHYDRO_00177 [Anaerococcus hydrogenalis DSM 7454] gi|325849028|ref|ZP_08170520.1| ribosomal protein L28 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212677333|gb|EEB36940.1| hypothetical protein ANHYDRO_00177 [Anaerococcus hydrogenalis DSM 7454] gi|325480273|gb|EGC83336.1| ribosomal protein L28 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 62 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K GNKV+ ++ + R F PN+ + L + I + + ++S Sbjct: 1 MARECDICGKGTKFGNKVTFSHRRLNRNFKPNVHK--LRAKINGSVKTINVCTKCIKS 56 >gi|71894090|ref|YP_278198.1| 50S ribosomal protein L28 [Mycoplasma synoviae 53] gi|123644523|sp|Q4A6Y4|RL28_MYCS5 RecName: Full=50S ribosomal protein L28 gi|71850878|gb|AAZ43487.1| 50S ribosomal protein L28 [Mycoplasma synoviae 53] Length = 63 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRV MSGN SHA N +RR+F NL ++ + ++ LRIS L++ Sbjct: 1 MSRVDWFRGVGPMSGNTRSHAMNASRRKFNVNLQKVRVDFGSGKR--TLRISTKTLKTWR 58 Query: 61 RQG 63 ++G Sbjct: 59 KKG 61 >gi|223043781|ref|ZP_03613824.1| ribosomal protein L28 [Staphylococcus capitis SK14] gi|239636297|ref|ZP_04677299.1| ribosomal protein L28 [Staphylococcus warneri L37603] gi|242373513|ref|ZP_04819087.1| 50S ribosomal protein L28 [Staphylococcus epidermidis M23864:W1] gi|314933399|ref|ZP_07840764.1| ribosomal protein L28 [Staphylococcus caprae C87] gi|222442878|gb|EEE48980.1| ribosomal protein L28 [Staphylococcus capitis SK14] gi|239597652|gb|EEQ80147.1| ribosomal protein L28 [Staphylococcus warneri L37603] gi|242348876|gb|EES40478.1| 50S ribosomal protein L28 [Staphylococcus epidermidis M23864:W1] gi|313653549|gb|EFS17306.1| ribosomal protein L28 [Staphylococcus caprae C87] gi|330684631|gb|EGG96336.1| ribosomal protein L28 [Staphylococcus epidermidis VCU121] Length = 62 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCYVTGRKASTGNNRSHALNANKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|55821925|ref|YP_140367.1| 50S ribosomal protein L28 [Streptococcus thermophilus LMG 18311] gi|55823844|ref|YP_142285.1| 50S ribosomal protein L28 [Streptococcus thermophilus CNRZ1066] gi|116628623|ref|YP_821242.1| 50S ribosomal protein L28 [Streptococcus thermophilus LMD-9] gi|67461279|sp|Q5LXP2|RL28_STRT1 RecName: Full=50S ribosomal protein L28 gi|67461285|sp|Q5M294|RL28_STRT2 RecName: Full=50S ribosomal protein L28 gi|122266783|sp|Q03IC6|RL28_STRTD RecName: Full=50S ribosomal protein L28 gi|55737910|gb|AAV61552.1| 50S ribosomal protein L28 [Streptococcus thermophilus LMG 18311] gi|55739829|gb|AAV63470.1| 50S ribosomal protein L28 [Streptococcus thermophilus CNRZ1066] gi|116101900|gb|ABJ67046.1| LSU ribosomal protein L28P [Streptococcus thermophilus LMD-9] gi|312279276|gb|ADQ63933.1| Ribosomal protein L28 [Streptococcus thermophilus ND03] Length = 62 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNKTKRVVKPNLQKVTVLID--GKPKKVWASARALKS 56 >gi|67461432|sp|Q6MTC5|RL28_MYCMS RecName: Full=50S ribosomal protein L28 gi|301321118|gb|ADK69761.1| ribosomal protein L28 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 65 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SG SHA N T+R++ NL ++ ++ + + +++S LR+++ Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-NENGSVFNIKVSARTLRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|227872680|ref|ZP_03991010.1| possible ribosomal protein L28 [Oribacterium sinus F0268] gi|227841494|gb|EEJ51794.1| possible ribosomal protein L28 [Oribacterium sinus F0268] Length = 77 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K V GN+VSH++ ++ + + N+ + + D ++ + LRS Sbjct: 11 MAK-CAICEKAVHFGNQVSHSHRRSNKMWKANVKSVRVKVD--GGTKKMYVCTSCLRS 65 >gi|160947382|ref|ZP_02094549.1| hypothetical protein PEPMIC_01316 [Parvimonas micra ATCC 33270] gi|158446516|gb|EDP23511.1| hypothetical protein PEPMIC_01316 [Parvimonas micra ATCC 33270] Length = 70 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS+ C + KT + GNKV+ ++ K+ R + N+ ++ ++ D ++ + L+S Sbjct: 3 MSKRCAICDKTKLFGNKVTFSHRKSSRSWGANIRKVRVVVD--GSVKRINVCTTCLKS 58 >gi|322388613|ref|ZP_08062213.1| 50S ribosomal protein L28 [Streptococcus infantis ATCC 700779] gi|321140533|gb|EFX36038.1| 50S ribosomal protein L28 [Streptococcus infantis ATCC 700779] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRSVKPNLQKVTVLID--GKPKKVWASARALKS 56 >gi|257438976|ref|ZP_05614731.1| ribosomal protein L28 [Faecalibacterium prausnitzii A2-165] gi|257198561|gb|EEU96845.1| ribosomal protein L28 [Faecalibacterium prausnitzii A2-165] gi|295100675|emb|CBK98220.1| LSU ribosomal protein L28P [Faecalibacterium prausnitzii L2-6] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ CE K V G KVSH++ ++ R + PN+ R+ + + + LR Sbjct: 1 MAK-CECCGKGVTFGIKVSHSHRRSNRTWKPNVRRVKAVVEGSPKYI--YACSRCLR 54 >gi|322392552|ref|ZP_08066012.1| 50S ribosomal protein L28 [Streptococcus peroris ATCC 700780] gi|321144544|gb|EFX39945.1| 50S ribosomal protein L28 [Streptococcus peroris ATCC 700780] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTVLID--GKPKKVWASARALKS 56 >gi|256393810|ref|YP_003115374.1| 50S ribosomal protein L28 [Catenulispora acidiphila DSM 44928] gi|256360036|gb|ACU73533.1| ribosomal protein L28 [Catenulispora acidiphila DSM 44928] Length = 73 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 11/66 (16%) Query: 1 MSRVCELTKKTVMSGNKVSH-ANNKTRRR--------FLPNLCRITLISDIMEQKYQLRI 51 MS+ C++ K GN+V+ +N RRR F PN+ + D + +L++ Sbjct: 1 MSQRCDVCGKEPSFGNQVARLGHNAQRRRVLGRSARMFRPNIQPVRATVD--GRPVKLKV 58 Query: 52 SKCALR 57 L+ Sbjct: 59 CTACLK 64 >gi|160931616|ref|ZP_02079011.1| hypothetical protein CLOLEP_00448 [Clostridium leptum DSM 753] gi|156869487|gb|EDO62859.1| hypothetical protein CLOLEP_00448 [Clostridium leptum DSM 753] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K + G +VSH++ ++ R + PN+ R+ I + ++ LRS Sbjct: 1 MAK-CEICGKDMAFGIQVSHSHRRSNRTWKPNIKRVRAIVN--GSPKRIYACTRCLRS 55 >gi|15900358|ref|NP_344962.1| 50S ribosomal protein L28 [Streptococcus pneumoniae TIGR4] gi|15902442|ref|NP_357992.1| 50S ribosomal protein L28 [Streptococcus pneumoniae R6] gi|111657905|ref|ZP_01408616.1| hypothetical protein SpneT_02000914 [Streptococcus pneumoniae TIGR4] gi|116515847|ref|YP_815911.1| 50S ribosomal protein L28 [Streptococcus pneumoniae D39] gi|125718769|ref|YP_001035902.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK36] gi|146317996|ref|YP_001197708.1| 50S ribosomal protein L28 [Streptococcus suis 05ZYH33] gi|146320178|ref|YP_001199889.1| 50S ribosomal protein L28 [Streptococcus suis 98HAH33] gi|148983835|ref|ZP_01817154.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP3-BS71] gi|148988192|ref|ZP_01819655.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP6-BS73] gi|148993983|ref|ZP_01823353.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP9-BS68] gi|148996843|ref|ZP_01824561.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP11-BS70] gi|149003538|ref|ZP_01828412.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP14-BS69] gi|149006422|ref|ZP_01830134.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP18-BS74] gi|149012192|ref|ZP_01833301.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP19-BS75] gi|149023727|ref|ZP_01836207.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP23-BS72] gi|157150697|ref|YP_001451009.1| 50S ribosomal protein L28 [Streptococcus gordonii str. Challis substr. CH1] gi|168482680|ref|ZP_02707632.1| ribosomal protein L28 [Streptococcus pneumoniae CDC1873-00] gi|168485574|ref|ZP_02710082.1| ribosomal protein L28 [Streptococcus pneumoniae CDC1087-00] gi|168488130|ref|ZP_02712329.1| ribosomal protein L28 [Streptococcus pneumoniae SP195] gi|168490646|ref|ZP_02714789.1| ribosomal protein L28 [Streptococcus pneumoniae CDC0288-04] gi|168495045|ref|ZP_02719188.1| ribosomal protein L28 [Streptococcus pneumoniae CDC3059-06] gi|168576841|ref|ZP_02722691.1| ribosomal protein L28 [Streptococcus pneumoniae MLV-016] gi|169834016|ref|YP_001693944.1| 50S ribosomal protein L28 [Streptococcus pneumoniae Hungary19A-6] gi|182683406|ref|YP_001835153.1| 50S ribosomal protein L28 [Streptococcus pneumoniae CGSP14] gi|194396811|ref|YP_002037118.1| 50S ribosomal protein L28 [Streptococcus pneumoniae G54] gi|221231304|ref|YP_002510456.1| 50S ribosomal protein L28 [Streptococcus pneumoniae ATCC 700669] gi|225854013|ref|YP_002735525.1| 50S ribosomal protein L28 [Streptococcus pneumoniae JJA] gi|225856169|ref|YP_002737680.1| 50S ribosomal protein L28 [Streptococcus pneumoniae P1031] gi|225858291|ref|YP_002739801.1| 50S ribosomal protein L28 [Streptococcus pneumoniae 70585] gi|225860463|ref|YP_002741972.1| 50S ribosomal protein L28 [Streptococcus pneumoniae Taiwan19F-14] gi|237650346|ref|ZP_04524598.1| 50S ribosomal protein L28 [Streptococcus pneumoniae CCRI 1974] gi|237822034|ref|ZP_04597879.1| 50S ribosomal protein L28 [Streptococcus pneumoniae CCRI 1974M2] gi|253751212|ref|YP_003024353.1| 50S ribosomal protein L28 [Streptococcus suis SC84] gi|253753113|ref|YP_003026253.1| 50S ribosomal protein L28 [Streptococcus suis P1/7] gi|253754935|ref|YP_003028075.1| 50S ribosomal protein L28 [Streptococcus suis BM407] gi|262283297|ref|ZP_06061063.1| ribosomal protein L28 [Streptococcus sp. 2_1_36FAA] gi|270293410|ref|ZP_06199619.1| conserved domain protein [Streptococcus sp. M143] gi|289168659|ref|YP_003446928.1| 50S ribosomal protein L28 [Streptococcus mitis B6] gi|293364271|ref|ZP_06610997.1| 50S ribosomal protein L28 [Streptococcus oralis ATCC 35037] gi|296877399|ref|ZP_06901437.1| 50S ribosomal protein L28 [Streptococcus parasanguinis ATCC 15912] gi|298229391|ref|ZP_06963072.1| 50S ribosomal protein L28 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254599|ref|ZP_06978185.1| 50S ribosomal protein L28 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502236|ref|YP_003724176.1| 50S ribosomal protein L28 [Streptococcus pneumoniae TCH8431/19A] gi|303255938|ref|ZP_07341968.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS455] gi|303259514|ref|ZP_07345491.1| 50S ribosomal protein L28 [Streptococcus pneumoniae SP-BS293] gi|303262378|ref|ZP_07348321.1| 50S ribosomal protein L28 [Streptococcus pneumoniae SP14-BS292] gi|303264794|ref|ZP_07350711.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS397] gi|303267374|ref|ZP_07353232.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS457] gi|303269692|ref|ZP_07355448.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS458] gi|306825887|ref|ZP_07459226.1| 50S ribosomal protein L28 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828860|ref|ZP_07462052.1| 50S ribosomal protein L28 [Streptococcus mitis ATCC 6249] gi|307067085|ref|YP_003876051.1| hypothetical protein SPAP_0456 [Streptococcus pneumoniae AP200] gi|307126656|ref|YP_003878687.1| 50S ribosomal protein L28 [Streptococcus pneumoniae 670-6B] gi|307702823|ref|ZP_07639772.1| ribosomal protein L28 [Streptococcus oralis ATCC 35037] gi|307703994|ref|ZP_07640928.1| ribosomal protein L28 [Streptococcus mitis SK597] gi|307707991|ref|ZP_07644465.1| ribosomal protein L28 [Streptococcus mitis NCTC 12261] gi|307710407|ref|ZP_07646846.1| ribosomal protein L28 [Streptococcus mitis SK564] gi|307711319|ref|ZP_07647739.1| ribosomal protein L28 [Streptococcus mitis SK321] gi|309799500|ref|ZP_07693730.1| ribosomal protein L28 [Streptococcus infantis SK1302] gi|312868090|ref|ZP_07728294.1| ribosomal protein L28 [Streptococcus parasanguinis F0405] gi|315612499|ref|ZP_07887412.1| 50S ribosomal protein L28 [Streptococcus sanguinis ATCC 49296] gi|319945603|ref|ZP_08019855.1| 50S ribosomal protein L28 [Streptococcus australis ATCC 700641] gi|322374961|ref|ZP_08049475.1| ribosomal protein L28 [Streptococcus sp. C300] gi|322377160|ref|ZP_08051652.1| ribosomal protein L28 [Streptococcus sp. M334] gi|322386816|ref|ZP_08060440.1| 50S ribosomal protein L28 [Streptococcus cristatus ATCC 51100] gi|322390955|ref|ZP_08064461.1| 50S ribosomal protein L28 [Streptococcus parasanguinis ATCC 903] gi|323350433|ref|ZP_08086096.1| 50S ribosomal protein L28 [Streptococcus sanguinis VMC66] gi|330832176|ref|YP_004401001.1| 50S ribosomal protein L28 [Streptococcus suis ST3] gi|331267054|ref|YP_004326684.1| 50S ribosomal protein L28 [Streptococcus oralis Uo5] gi|54039152|sp|P66156|RL28_STRR6 RecName: Full=50S ribosomal protein L28 gi|54041852|sp|P66155|RL28_STRPN RecName: Full=50S ribosomal protein L28 gi|122279203|sp|Q04M37|RL28_STRP2 RecName: Full=50S ribosomal protein L28 gi|166228162|sp|A4VZF0|RL28_STRS2 RecName: Full=50S ribosomal protein L28 gi|166228163|sp|A3CQ97|RL28_STRSV RecName: Full=50S ribosomal protein L28 gi|166228164|sp|A4VT69|RL28_STRSY RecName: Full=50S ribosomal protein L28 gi|189029459|sp|A8AYZ9|RL28_STRGC RecName: Full=50S ribosomal protein L28 gi|226699170|sp|B5E1Q0|RL28_STRP4 RecName: Full=50S ribosomal protein L28 gi|226699171|sp|B1I9N1|RL28_STRPI RecName: Full=50S ribosomal protein L28 gi|226699172|sp|B2ILY3|RL28_STRPS RecName: Full=50S ribosomal protein L28 gi|254801378|sp|C1C5H5|RL28_STRP7 RecName: Full=50S ribosomal protein L28 gi|254801379|sp|B8ZLK5|RL28_STRPJ RecName: Full=50S ribosomal protein L28 gi|254801381|sp|C1CCK4|RL28_STRZJ RecName: Full=50S ribosomal protein L28 gi|254801382|sp|C1CIU2|RL28_STRZP RecName: Full=50S ribosomal protein L28 gi|254801383|sp|C1CPV0|RL28_STRZT RecName: Full=50S ribosomal protein L28 gi|14971910|gb|AAK74602.1| ribosomal protein L28 [Streptococcus pneumoniae TIGR4] gi|15457960|gb|AAK99202.1| 50S Ribosomal protein L28 [Streptococcus pneumoniae R6] gi|116076423|gb|ABJ54143.1| ribosomal protein L28 [Streptococcus pneumoniae D39] gi|125498686|gb|ABN45352.1| 50S ribosomal protein L28, putative [Streptococcus sanguinis SK36] gi|145688802|gb|ABP89308.1| Ribosomal protein L28 [Streptococcus suis 05ZYH33] gi|145690984|gb|ABP91489.1| Ribosomal protein L28 [Streptococcus suis 98HAH33] gi|147757418|gb|EDK64457.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP11-BS70] gi|147758474|gb|EDK65473.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP14-BS69] gi|147762199|gb|EDK69161.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP18-BS74] gi|147763794|gb|EDK70728.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP19-BS75] gi|147923982|gb|EDK75094.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP3-BS71] gi|147926656|gb|EDK77729.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP6-BS73] gi|147927572|gb|EDK78599.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP9-BS68] gi|147929664|gb|EDK80656.1| 50S ribosomal protein L28, putative [Streptococcus pneumoniae SP23-BS72] gi|157075491|gb|ABV10174.1| ribosomal protein L28 [Streptococcus gordonii str. Challis substr. CH1] gi|168996518|gb|ACA37130.1| ribosomal protein L28 [Streptococcus pneumoniae Hungary19A-6] gi|172043875|gb|EDT51921.1| ribosomal protein L28 [Streptococcus pneumoniae CDC1873-00] gi|182628740|gb|ACB89688.1| 50S ribosomal protein L28 [Streptococcus pneumoniae CGSP14] gi|183571219|gb|EDT91747.1| ribosomal protein L28 [Streptococcus pneumoniae CDC1087-00] gi|183573024|gb|EDT93552.1| ribosomal protein L28 [Streptococcus pneumoniae SP195] gi|183574977|gb|EDT95505.1| ribosomal protein L28 [Streptococcus pneumoniae CDC0288-04] gi|183575101|gb|EDT95629.1| ribosomal protein L28 [Streptococcus pneumoniae CDC3059-06] gi|183577448|gb|EDT97976.1| ribosomal protein L28 [Streptococcus pneumoniae MLV-016] gi|194356478|gb|ACF54926.1| ribosomal protein L28 [Streptococcus pneumoniae G54] gi|220673764|emb|CAR68263.1| 50S ribosomal protein L28 [Streptococcus pneumoniae ATCC 700669] gi|225720544|gb|ACO16398.1| ribosomal protein L28 [Streptococcus pneumoniae 70585] gi|225724006|gb|ACO19859.1| ribosomal protein L28 [Streptococcus pneumoniae JJA] gi|225725122|gb|ACO20974.1| ribosomal protein L28 [Streptococcus pneumoniae P1031] gi|225726933|gb|ACO22784.1| ribosomal protein L28 [Streptococcus pneumoniae Taiwan19F-14] gi|251815501|emb|CAZ51079.1| 50S ribosomal protein L28 [Streptococcus suis SC84] gi|251817399|emb|CAZ55135.1| 50S ribosomal protein L28 [Streptococcus suis BM407] gi|251819358|emb|CAR44749.1| 50S ribosomal protein L28 [Streptococcus suis P1/7] gi|262260788|gb|EEY79488.1| ribosomal protein L28 [Streptococcus sp. 2_1_36FAA] gi|270278259|gb|EFA24107.1| conserved domain protein [Streptococcus sp. M143] gi|288908226|emb|CBJ23068.1| 50S ribosomal protein L28 [Streptococcus mitis B6] gi|291317117|gb|EFE57544.1| 50S ribosomal protein L28 [Streptococcus oralis ATCC 35037] gi|292557774|gb|ADE30775.1| 50S ribosomal protein L28 [Streptococcus suis GZ1] gi|296431612|gb|EFH17421.1| 50S ribosomal protein L28 [Streptococcus parasanguinis ATCC 15912] gi|298237831|gb|ADI68962.1| 50S ribosomal protein L28 [Streptococcus pneumoniae TCH8431/19A] gi|301793678|emb|CBW36064.1| 50S ribosomal protein L28 [Streptococcus pneumoniae INV104] gi|301799536|emb|CBW32085.1| 50S ribosomal protein L28 [Streptococcus pneumoniae OXC141] gi|301801350|emb|CBW34034.1| 50S ribosomal protein L28 [Streptococcus pneumoniae INV200] gi|302597113|gb|EFL64229.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS455] gi|302636477|gb|EFL66969.1| 50S ribosomal protein L28 [Streptococcus pneumoniae SP14-BS292] gi|302639448|gb|EFL69906.1| 50S ribosomal protein L28 [Streptococcus pneumoniae SP-BS293] gi|302640789|gb|EFL71180.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS458] gi|302643107|gb|EFL73396.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS457] gi|302645661|gb|EFL75891.1| 50S ribosomal protein L28 [Streptococcus pneumoniae BS397] gi|304429038|gb|EFM32126.1| 50S ribosomal protein L28 [Streptococcus mitis ATCC 6249] gi|304432248|gb|EFM35225.1| 50S ribosomal protein L28 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408622|gb|ADM84049.1| hypothetical protein SPAP_0456 [Streptococcus pneumoniae AP200] gi|306483718|gb|ADM90587.1| ribosomal protein L28 [Streptococcus pneumoniae 670-6B] gi|307615959|gb|EFN95158.1| ribosomal protein L28 [Streptococcus mitis NCTC 12261] gi|307616835|gb|EFN96015.1| ribosomal protein L28 [Streptococcus mitis SK321] gi|307618819|gb|EFN97956.1| ribosomal protein L28 [Streptococcus mitis SK564] gi|307622460|gb|EFO01463.1| ribosomal protein L28 [Streptococcus mitis SK597] gi|307623624|gb|EFO02612.1| ribosomal protein L28 [Streptococcus oralis ATCC 35037] gi|308116856|gb|EFO54302.1| ribosomal protein L28 [Streptococcus infantis SK1302] gi|311096494|gb|EFQ54734.1| ribosomal protein L28 [Streptococcus parasanguinis F0405] gi|315315480|gb|EFU63519.1| 50S ribosomal protein L28 [Streptococcus sanguinis ATCC 49296] gi|319748202|gb|EFW00444.1| 50S ribosomal protein L28 [Streptococcus australis ATCC 700641] gi|319757484|gb|ADV69426.1| 50S ribosomal protein L28 [Streptococcus suis JS14] gi|321142330|gb|EFX37802.1| 50S ribosomal protein L28 [Streptococcus parasanguinis ATCC 903] gi|321269098|gb|EFX52034.1| 50S ribosomal protein L28 [Streptococcus cristatus ATCC 51100] gi|321280461|gb|EFX57500.1| ribosomal protein L28 [Streptococcus sp. C300] gi|321281873|gb|EFX58881.1| ribosomal protein L28 [Streptococcus sp. M334] gi|322123370|gb|EFX95048.1| 50S ribosomal protein L28 [Streptococcus sanguinis VMC66] gi|324989919|gb|EGC21861.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK353] gi|324992369|gb|EGC24290.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK405] gi|324996108|gb|EGC28019.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK678] gi|325686808|gb|EGD28833.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK72] gi|325689065|gb|EGD31073.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK115] gi|325695625|gb|EGD37525.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK150] gi|325697538|gb|EGD39424.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK160] gi|326683726|emb|CBZ01344.1| 50S ribosomal protein L28 [Streptococcus oralis Uo5] gi|327390850|gb|EGE89190.1| ribosomal protein L28 [Streptococcus pneumoniae GA04375] gi|327460598|gb|EGF06933.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1] gi|327462849|gb|EGF09171.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1057] gi|327468276|gb|EGF13761.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK330] gi|327472328|gb|EGF17759.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK408] gi|327488955|gb|EGF20752.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1058] gi|328944956|gb|EGG39114.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1087] gi|329306399|gb|AEB80815.1| 50S ribosomal protein L28 [Streptococcus suis ST3] gi|332075284|gb|EGI85754.1| ribosomal protein L28 [Streptococcus pneumoniae GA17570] gi|332076886|gb|EGI87348.1| ribosomal protein L28 [Streptococcus pneumoniae GA17545] gi|332077726|gb|EGI88187.1| ribosomal protein L28 [Streptococcus pneumoniae GA41301] gi|332202347|gb|EGJ16416.1| ribosomal protein L28 [Streptococcus pneumoniae GA41317] gi|332203611|gb|EGJ17678.1| ribosomal protein L28 [Streptococcus pneumoniae GA47368] gi|332204467|gb|EGJ18532.1| ribosomal protein L28 [Streptococcus pneumoniae GA47901] gi|332359217|gb|EGJ37038.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK49] gi|332359835|gb|EGJ37649.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1056] gi|332365513|gb|EGJ43273.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK1059] gi|332366206|gb|EGJ43961.1| 50S ribosomal protein L28 [Streptococcus sanguinis SK355] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA N+T+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLID--GKPKKVWASARALKS 56 >gi|224476334|ref|YP_002633940.1| 50S ribosomal protein L28 [Staphylococcus carnosus subsp. carnosus TM300] gi|254801376|sp|B9DPK8|RL28_STACT RecName: Full=50S ribosomal protein L28 gi|222420941|emb|CAL27755.1| 50S ribosomal protein L28 [Staphylococcus carnosus subsp. carnosus TM300] Length = 62 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN+ SHA N T+RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCYVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|156094308|ref|XP_001613191.1| 50S ribosomal subunit protein L28 [Plasmodium vivax SaI-1] gi|148802065|gb|EDL43464.1| 50S ribosomal subunit protein L28, putative [Plasmodium vivax] Length = 162 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKTVM-SGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C + K + K+S + KT R+ NL R + + ++ +LR+S L++++ Sbjct: 34 ARRCMILGKMDNWNARKISKSGVKTHRKQRVNLLRKRIYFEEEDRFVKLRVSARGLKTIK 93 Query: 61 RQG 63 + G Sbjct: 94 KYG 96 >gi|228474967|ref|ZP_04059695.1| ribosomal protein L28 [Staphylococcus hominis SK119] gi|314936614|ref|ZP_07843961.1| ribosomal protein L28 [Staphylococcus hominis subsp. hominis C80] gi|228270952|gb|EEK12340.1| ribosomal protein L28 [Staphylococcus hominis SK119] gi|313655233|gb|EFS18978.1| ribosomal protein L28 [Staphylococcus hominis subsp. hominis C80] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +RRF NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCYVTGRKATTGNNRSHALNANKRRFNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|221057309|ref|XP_002259792.1| 50S ribosomal subunit protein L28 [Plasmodium knowlesi strain H] gi|193809864|emb|CAQ40568.1| 50S ribosomal subunit protein L28, putative [Plasmodium knowlesi strain H] Length = 258 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 3 RVCELTKKTVM-SGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 R C + K + K+S + KT R+ NL R + + ++ +LR+S L+++++ Sbjct: 131 RRCMILGKMDNWNARKISKSGVKTHRKQRVNLLRKRIYFEEEDRFVKLRVSARGLKTIKK 190 Query: 62 QG 63 G Sbjct: 191 YG 192 >gi|319892220|ref|YP_004149095.1| LSU ribosomal protein L28p [Staphylococcus pseudintermedius HKU10-03] gi|317161916|gb|ADV05459.1| LSU ribosomal protein L28p [Staphylococcus pseudintermedius HKU10-03] gi|323464683|gb|ADX76836.1| ribosomal protein L28 [Staphylococcus pseudintermedius ED99] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN+ SHA N T+RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKECFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVD--GKPKKVWVSTRALKS 56 >gi|205373329|ref|ZP_03226133.1| 50S ribosomal protein L28 [Bacillus coahuilensis m4-4] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N T+R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MPKQCVVTGRKARTGNARSHAMNATKRTWGANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|255961450|ref|NP_975469.3| 50S ribosomal protein L28 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492515|emb|CAE77111.1| 50S RIBOSOMAL PROTEIN L28 [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 68 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R LT K+ +SG SHA N T+R++ NL ++ ++ + + +++S LR+++ Sbjct: 4 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-NENGSVFNIKVSARTLRTLK 62 Query: 61 R 61 + Sbjct: 63 K 63 >gi|229822825|ref|ZP_04448895.1| hypothetical protein GCWU000282_00114 [Catonella morbi ATCC 51271] gi|229787638|gb|EEP23752.1| hypothetical protein GCWU000282_00114 [Catonella morbi ATCC 51271] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C T + SGN S A NKT+RRF NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAKECYFTGRKARSGNTRSKAMNKTKRRFGANLQKVRILVD--GEPKKVWVSARALKS 56 >gi|154504982|ref|ZP_02041720.1| hypothetical protein RUMGNA_02492 [Ruminococcus gnavus ATCC 29149] gi|153794865|gb|EDN77285.1| hypothetical protein RUMGNA_02492 [Ruminococcus gnavus ATCC 29149] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M C + +K GN VSH++ KT + + N+ + + ++ + ++ + L+S Sbjct: 1 MMAKCAICEKGAHFGNNVSHSHRKTPKMWKSNVKSVRVKTEGGAK--KMYVCTSCLKS 56 >gi|229824981|ref|ZP_04451050.1| hypothetical protein GCWU000182_00330 [Abiotrophia defectiva ATCC 49176] gi|229790984|gb|EEP27098.1| hypothetical protein GCWU000182_00330 [Abiotrophia defectiva ATCC 49176] Length = 61 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V G VSH++ + R + N+ + + + + + + LRS Sbjct: 1 MAK-CDVCGKGVSFGIAVSHSHRRNNRSWKANVRTVRVKTPGGAK--TMHVCASCLRS 55 >gi|290566747|gb|ADD39723.1| mitochondrial ribosomal protein L28 [Trichinella spiralis] Length = 165 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Query: 7 LTKKTVMSGNKVSHANNKTRRR---------FLPNLCRITLISDIMEQKYQLRISKCALR 57 + ++ G K+S+ + +R + P L + L S+I+++ + ++ L+ Sbjct: 93 WGGEGIVKGYKLSNIPPRRKRFLPRFWLPRFWFPTLMKKVLYSEILDKYMLVTVTSRTLQ 152 Query: 58 SVERQGGLDRFLS 70 ++ GLD +L Sbjct: 153 LIDENQGLDYYLL 165 >gi|146296253|ref|YP_001180024.1| ribosomal protein L28 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409829|gb|ABP66833.1| LSU ribosomal protein L28P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 75 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 CE+ K V GNKVSH+N K+RR + PN+ +I +I I Q+ ++ + ++ Sbjct: 18 CEICNKKVSFGNKVSHSNKKSRRTWKPNVKKIRVI--INGQRKRIYVCTSCIK 68 >gi|229541131|ref|ZP_04430191.1| ribosomal protein L28 [Bacillus coagulans 36D1] gi|229325551|gb|EEN91226.1| ribosomal protein L28 [Bacillus coagulans 36D1] Length = 62 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +SGNK SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MPKKCAITGRKTVSGNKRSHAMNANKRTWKANLQKVRILVD--GKPQRVWVSARALKS 56 >gi|288904518|ref|YP_003429739.1| ribosomal protein L28 [Streptococcus gallolyticus UCN34] gi|306830512|ref|ZP_07463680.1| 50S ribosomal protein L28 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306832749|ref|ZP_07465885.1| 50S ribosomal protein L28 [Streptococcus bovis ATCC 700338] gi|325977489|ref|YP_004287205.1| 50S ribosomal protein L28 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731243|emb|CBI12793.1| ribosomal protein L28 [Streptococcus gallolyticus UCN34] gi|304425098|gb|EFM28228.1| 50S ribosomal protein L28 [Streptococcus bovis ATCC 700338] gi|304427306|gb|EFM30410.1| 50S ribosomal protein L28 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177417|emb|CBZ47461.1| 50S ribosomal protein L28 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 62 Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA NKT+R PNL ++T++ + + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTILVN--GKPKKVWASARALKS 56 >gi|70726692|ref|YP_253606.1| 50S ribosomal protein L28 [Staphylococcus haemolyticus JCSC1435] gi|82581586|sp|Q4L5S5|RL28_STAHJ RecName: Full=50S ribosomal protein L28 gi|68447416|dbj|BAE05000.1| 50S ribosomal protein L28 [Staphylococcus haemolyticus JCSC1435] Length = 62 Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +RRF NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCYVTGRKASTGNNRSHALNANKRRFNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|171777506|ref|ZP_02919228.1| hypothetical protein STRINF_00055 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283216|gb|EDT48640.1| hypothetical protein STRINF_00055 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 62 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +SGN SHA NKT+R PNL ++T++ + + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTVLVN--GKPKKVWASARALKS 56 >gi|238783985|ref|ZP_04628001.1| 50S ribosomal protein L28 [Yersinia bercovieri ATCC 43970] gi|238715093|gb|EEQ07089.1| 50S ribosomal protein L28 [Yersinia bercovieri ATCC 43970] Length = 57 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 N T+RRFLPNL + ++ LR+S +R ++++G ++ L+ + Sbjct: 1 MNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKG-IEAVLAELRTR 53 >gi|323447585|gb|EGB03501.1| hypothetical protein AURANDRAFT_39327 [Aureococcus anophagefferens] Length = 120 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 3 RVCELTKKTVM-SGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 RVC++T K V+ ++ + + NL L + Q+R+S AL+++ + Sbjct: 42 RVCDMTGKRRNAKAMTVTFSHTRNHKVQKVNLQDRRLWWSEGNKFVQMRVSTKALKTIAK 101 Query: 62 QG 63 G Sbjct: 102 YG 103 >gi|89098696|ref|ZP_01171578.1| 50S ribosomal protein L28 [Bacillus sp. NRRL B-14911] gi|89086658|gb|EAR65777.1| 50S ribosomal protein L28 [Bacillus sp. NRRL B-14911] Length = 62 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M R C +T + SGNK SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MPRKCVVTGRKTTSGNKRSHAMNANKRTWGANLQKVRILVD--GKPKRVWVSARALKS 56 >gi|8925948|gb|AAF81680.1|AF233069_3 50S ribosomal protein [Galdieria sulphuraria] Length = 72 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+L KT + NKVSH+N+K++R NL + + S + ++ +LRIS ++ + Sbjct: 5 MTRKCQLLFKTSNTANKVSHSNHKSKRLQFVNLQKKKVWSSLKKKWIKLRISTKMIKILN 64 Query: 61 RQGGLDRFL 69 ++ +D FL Sbjct: 65 KK-NIDYFL 72 >gi|303241726|ref|ZP_07328223.1| ribosomal protein L28 [Acetivibrio cellulolyticus CD2] gi|302590727|gb|EFL60478.1| ribosomal protein L28 [Acetivibrio cellulolyticus CD2] Length = 62 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K + G +VSH+N KT R + PN+ ++ ++ + + I LRS Sbjct: 1 MAK-CDVCSKDYLFGLRVSHSNRKTNRSWKPNVRKVRIVDNGTPKSI--NICTRCLRS 55 >gi|238764330|ref|ZP_04625281.1| 50S ribosomal protein L28 [Yersinia kristensenii ATCC 33638] gi|238794407|ref|ZP_04638018.1| 50S ribosomal protein L28 [Yersinia intermedia ATCC 29909] gi|238697481|gb|EEP90247.1| 50S ribosomal protein L28 [Yersinia kristensenii ATCC 33638] gi|238726308|gb|EEQ17851.1| 50S ribosomal protein L28 [Yersinia intermedia ATCC 29909] Length = 57 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 N T+RRFLPNL + ++ LR+S +R ++++G ++ L+ + Sbjct: 1 MNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKG-IETVLAEIRAR 53 >gi|70948359|ref|XP_743701.1| 50S ribosomal subunit protein L28 [Plasmodium chabaudi chabaudi] gi|56523326|emb|CAH84917.1| 50S ribosomal subunit protein L28, putative [Plasmodium chabaudi chabaudi] Length = 218 Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C + K + K+S + KT R N + + + ++ +LR+S L++++ Sbjct: 88 ARRCPILGKMDNRNARKISKSGIKTHRIQRVNFVKRRIYFEEEDRFVKLRVSTRGLKTIK 147 Query: 61 RQG 63 + G Sbjct: 148 KYG 150 >gi|289550996|ref|YP_003471900.1| LSU ribosomal protein L28p [Staphylococcus lugdunensis HKU09-01] gi|315658491|ref|ZP_07911363.1| 50S ribosomal protein L28 [Staphylococcus lugdunensis M23590] gi|289180528|gb|ADC87773.1| LSU ribosomal protein L28p [Staphylococcus lugdunensis HKU09-01] gi|315496820|gb|EFU85143.1| 50S ribosomal protein L28 [Staphylococcus lugdunensis M23590] Length = 62 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCYVTGRKASTGNHRSHALNANKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|189485611|ref|YP_001956552.1| 50S ribosomal protein L28 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226699181|sp|B1H0Q9|RL28_UNCTG RecName: Full=50S ribosomal protein L28 gi|170287570|dbj|BAG14091.1| 50S ribosomal protein L28 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 63 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MS C + K SGN VSH+N ++R F PNL + ++ + ++ + + ++S Sbjct: 1 MSYKCAVCGKGSRSGNTVSHSNKASKRLFRPNLQSLNILLNGIKT--REYVCTSCIKS 56 >gi|293393618|ref|ZP_06637928.1| 50S ribosomal protein L28 [Serratia odorifera DSM 4582] gi|291423953|gb|EFE97172.1| 50S ribosomal protein L28 [Serratia odorifera DSM 4582] Length = 57 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLSARM 81 N T+RRFLPNL + ++ LR+S +R ++++G + +L AR Sbjct: 1 MNATKRRFLPNLHSHRFWVEAEKRFVTLRVSAKGMRVIDKKG------IETVLADLRARG 54 Query: 82 RT 83 Sbjct: 55 EK 56 >gi|291550313|emb|CBL26575.1| LSU ribosomal protein L28P [Ruminococcus torques L2-14] Length = 61 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + ++ ++ + LRS Sbjct: 1 MAK-CAICEKGAHFGNNVSHSHRRSPKMWKSNVKSVRVKTE--GGSQKMYVCTSCLRS 55 >gi|238760451|ref|ZP_04621589.1| 50S ribosomal protein L28 [Yersinia aldovae ATCC 35236] gi|238798813|ref|ZP_04642282.1| 50S ribosomal protein L28 [Yersinia mollaretii ATCC 43969] gi|238701346|gb|EEP93925.1| 50S ribosomal protein L28 [Yersinia aldovae ATCC 35236] gi|238717321|gb|EEQ09168.1| 50S ribosomal protein L28 [Yersinia mollaretii ATCC 43969] Length = 57 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLSARM 81 N T+RRFLPNL + ++ LR+S +R ++++G + L R Sbjct: 1 MNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKG------IETVLAELRTRG 54 Query: 82 RT 83 Sbjct: 55 EK 56 >gi|238750802|ref|ZP_04612300.1| 50S ribosomal protein L28 [Yersinia rohdei ATCC 43380] gi|238754769|ref|ZP_04616121.1| 50S ribosomal protein L28 [Yersinia ruckeri ATCC 29473] gi|238789558|ref|ZP_04633342.1| 50S ribosomal protein L28 [Yersinia frederiksenii ATCC 33641] gi|238707077|gb|EEP99442.1| 50S ribosomal protein L28 [Yersinia ruckeri ATCC 29473] gi|238710946|gb|EEQ03166.1| 50S ribosomal protein L28 [Yersinia rohdei ATCC 43380] gi|238722311|gb|EEQ13967.1| 50S ribosomal protein L28 [Yersinia frederiksenii ATCC 33641] Length = 57 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLSARM 81 N T+RRFLPNL + ++ LR+S +R ++++G + L AR Sbjct: 1 MNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKG------IETVLAELRARG 54 Query: 82 RT 83 Sbjct: 55 EK 56 >gi|15924214|ref|NP_371748.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Mu50] gi|15926807|ref|NP_374340.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus N315] gi|21282836|ref|NP_645924.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MW2] gi|49483387|ref|YP_040611.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MRSA252] gi|49486063|ref|YP_043284.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MSSA476] gi|57651792|ref|YP_186098.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus COL] gi|82750828|ref|YP_416569.1| 50S ribosomal protein L28 [Staphylococcus aureus RF122] gi|87160693|ref|YP_493814.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194930|ref|YP_499730.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267715|ref|YP_001246658.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus JH9] gi|150393773|ref|YP_001316448.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus JH1] gi|151221346|ref|YP_001332168.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979545|ref|YP_001441804.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Mu3] gi|221142014|ref|ZP_03566507.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315582|ref|ZP_04838795.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731841|ref|ZP_04866006.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733538|ref|ZP_04867703.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TCH130] gi|255006011|ref|ZP_05144612.2| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425277|ref|ZP_05601702.1| LSU ribosomal protein L28P [Staphylococcus aureus subsp. aureus 55/2053] gi|257427937|ref|ZP_05604335.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430570|ref|ZP_05606952.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus 68-397] gi|257433331|ref|ZP_05609689.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus E1410] gi|257436173|ref|ZP_05612220.1| LSU ribosomal protein L28 [Staphylococcus aureus subsp. aureus M876] gi|257795720|ref|ZP_05644699.1| 50S ribosomal protein L28 [Staphylococcus aureus A9781] gi|258415944|ref|ZP_05682214.1| 50S ribosomal protein L28 [Staphylococcus aureus A9763] gi|258419691|ref|ZP_05682658.1| LSU ribosomal protein L28 [Staphylococcus aureus A9719] gi|258423733|ref|ZP_05686619.1| LSU ribosomal protein L28 [Staphylococcus aureus A9635] gi|258438733|ref|ZP_05689886.1| 50S ribosomal protein L28 [Staphylococcus aureus A9299] gi|258444561|ref|ZP_05692890.1| ribosomal protein L28 [Staphylococcus aureus A8115] gi|258447606|ref|ZP_05695750.1| 50S ribosomal protein L28 [Staphylococcus aureus A6300] gi|258449448|ref|ZP_05697551.1| ribosomal protein L28 [Staphylococcus aureus A6224] gi|258452521|ref|ZP_05700527.1| LSU ribosomal protein L28P [Staphylococcus aureus A5948] gi|258454827|ref|ZP_05702791.1| 50S ribosomal protein L28 [Staphylococcus aureus A5937] gi|262048122|ref|ZP_06021009.1| 50S ribosomal protein L28 [Staphylococcus aureus D30] gi|262051872|ref|ZP_06024088.1| 50S ribosomal protein L28 [Staphylococcus aureus 930918-3] gi|269202839|ref|YP_003282108.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ED98] gi|282892710|ref|ZP_06300945.1| 50S ribosomal protein L28 [Staphylococcus aureus A8117] gi|282903777|ref|ZP_06311665.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus C160] gi|282905541|ref|ZP_06313396.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Btn1260] gi|282908517|ref|ZP_06316347.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910796|ref|ZP_06318599.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus WBG10049] gi|282913999|ref|ZP_06321786.1| conserved domain protein [Staphylococcus aureus subsp. aureus M899] gi|282916473|ref|ZP_06324235.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus D139] gi|282918921|ref|ZP_06326656.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus C427] gi|282920006|ref|ZP_06327735.1| 50S ribosomal protein L28 [Staphylococcus aureus A9765] gi|282924044|ref|ZP_06331720.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus C101] gi|282927564|ref|ZP_06335180.1| 50S ribosomal protein L28 [Staphylococcus aureus A10102] gi|283770285|ref|ZP_06343177.1| large subunit ribosomal protein L28 [Staphylococcus aureus subsp. aureus H19] gi|283957965|ref|ZP_06375416.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus A017934/97] gi|284024148|ref|ZP_06378546.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus 132] gi|293501032|ref|ZP_06666883.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus 58-424] gi|293509991|ref|ZP_06668699.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus M809] gi|293526579|ref|ZP_06671264.1| conserved domain protein [Staphylococcus aureus subsp. aureus M1015] gi|294848217|ref|ZP_06788964.1| 50S ribosomal protein L28 [Staphylococcus aureus A9754] gi|295407162|ref|ZP_06816963.1| 50S ribosomal protein L28 [Staphylococcus aureus A8819] gi|295427709|ref|ZP_06820341.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275245|ref|ZP_06857752.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MR1] gi|297208132|ref|ZP_06924563.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245952|ref|ZP_06929811.1| 50S ribosomal protein L28 [Staphylococcus aureus A8796] gi|297591332|ref|ZP_06949970.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MN8] gi|300912212|ref|ZP_07129655.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TCH70] gi|304381213|ref|ZP_07363866.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039150|sp|P66153|RL28_STAAN RecName: Full=50S ribosomal protein L28 gi|54039151|sp|P66154|RL28_STAAW RecName: Full=50S ribosomal protein L28 gi|54041851|sp|P66152|RL28_STAAM RecName: Full=50S ribosomal protein L28 gi|56749524|sp|Q6G9Y9|RL28_STAAS RecName: Full=50S ribosomal protein L28 gi|56749571|sp|Q6GHL1|RL28_STAAR RecName: Full=50S ribosomal protein L28 gi|67461253|sp|Q5HGK9|RL28_STAAC RecName: Full=50S ribosomal protein L28 gi|122539716|sp|Q2FZ60|RL28_STAA8 RecName: Full=50S ribosomal protein L28 gi|123486223|sp|Q2FHL4|RL28_STAA3 RecName: Full=50S ribosomal protein L28 gi|123549055|sp|Q2YXJ2|RL28_STAAB RecName: Full=50S ribosomal protein L28 gi|166228156|sp|A7X1I6|RL28_STAA1 RecName: Full=50S ribosomal protein L28 gi|172048853|sp|A6QGC4|RL28_STAAE RecName: Full=50S ribosomal protein L28 gi|189029457|sp|A6U143|RL28_STAA2 RecName: Full=50S ribosomal protein L28 gi|189029458|sp|A5ISA9|RL28_STAA9 RecName: Full=50S ribosomal protein L28 gi|13701024|dbj|BAB42319.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus N315] gi|14246994|dbj|BAB57386.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Mu50] gi|21204275|dbj|BAB94972.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MW2] gi|49241516|emb|CAG40202.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MRSA252] gi|49244506|emb|CAG42935.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MSSA476] gi|57285978|gb|AAW38072.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus COL] gi|82656359|emb|CAI80777.1| 50S ribosomal protein L28 [Staphylococcus aureus RF122] gi|87126667|gb|ABD21181.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202488|gb|ABD30298.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740784|gb|ABQ49082.1| LSU ribosomal protein L28P [Staphylococcus aureus subsp. aureus JH9] gi|149946225|gb|ABR52161.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus JH1] gi|150374146|dbj|BAF67406.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus str. Newman] gi|156721680|dbj|BAF78097.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Mu3] gi|253724440|gb|EES93169.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728592|gb|EES97321.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TCH130] gi|257271734|gb|EEV03872.1| LSU ribosomal protein L28P [Staphylococcus aureus subsp. aureus 55/2053] gi|257274778|gb|EEV06265.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278698|gb|EEV09317.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus 68-397] gi|257281424|gb|EEV11561.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus E1410] gi|257284455|gb|EEV14575.1| LSU ribosomal protein L28 [Staphylococcus aureus subsp. aureus M876] gi|257789692|gb|EEV28032.1| 50S ribosomal protein L28 [Staphylococcus aureus A9781] gi|257839280|gb|EEV63754.1| 50S ribosomal protein L28 [Staphylococcus aureus A9763] gi|257844276|gb|EEV68658.1| LSU ribosomal protein L28 [Staphylococcus aureus A9719] gi|257845965|gb|EEV69993.1| LSU ribosomal protein L28 [Staphylococcus aureus A9635] gi|257847992|gb|EEV71985.1| 50S ribosomal protein L28 [Staphylococcus aureus A9299] gi|257850054|gb|EEV74007.1| ribosomal protein L28 [Staphylococcus aureus A8115] gi|257853797|gb|EEV76756.1| 50S ribosomal protein L28 [Staphylococcus aureus A6300] gi|257857436|gb|EEV80334.1| ribosomal protein L28 [Staphylococcus aureus A6224] gi|257859739|gb|EEV82581.1| LSU ribosomal protein L28P [Staphylococcus aureus A5948] gi|257863210|gb|EEV85974.1| 50S ribosomal protein L28 [Staphylococcus aureus A5937] gi|259160273|gb|EEW45301.1| 50S ribosomal protein L28 [Staphylococcus aureus 930918-3] gi|259163688|gb|EEW48243.1| 50S ribosomal protein L28 [Staphylococcus aureus D30] gi|262075129|gb|ACY11102.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ED98] gi|269940716|emb|CBI49097.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TW20] gi|282314016|gb|EFB44408.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus C101] gi|282316731|gb|EFB47105.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus C427] gi|282319913|gb|EFB50261.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus D139] gi|282322067|gb|EFB52391.1| conserved domain protein [Staphylococcus aureus subsp. aureus M899] gi|282325401|gb|EFB55710.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327579|gb|EFB57862.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330833|gb|EFB60347.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590567|gb|EFB95644.1| 50S ribosomal protein L28 [Staphylococcus aureus A10102] gi|282594722|gb|EFB99706.1| 50S ribosomal protein L28 [Staphylococcus aureus A9765] gi|282595395|gb|EFC00359.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus C160] gi|282764707|gb|EFC04832.1| 50S ribosomal protein L28 [Staphylococcus aureus A8117] gi|283460432|gb|EFC07522.1| large subunit ribosomal protein L28 [Staphylococcus aureus subsp. aureus H19] gi|283470436|emb|CAQ49647.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus ST398] gi|283790114|gb|EFC28931.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus A017934/97] gi|285816906|gb|ADC37393.1| 50S ribosomal protein L28 [Staphylococcus aureus 04-02981] gi|290920651|gb|EFD97714.1| conserved domain protein [Staphylococcus aureus subsp. aureus M1015] gi|291096037|gb|EFE26298.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus 58-424] gi|291466935|gb|EFF09453.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus M809] gi|294825017|gb|EFG41439.1| 50S ribosomal protein L28 [Staphylococcus aureus A9754] gi|294968015|gb|EFG44043.1| 50S ribosomal protein L28 [Staphylococcus aureus A8819] gi|295128067|gb|EFG57701.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887375|gb|EFH26277.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177116|gb|EFH36370.1| 50S ribosomal protein L28 [Staphylococcus aureus A8796] gi|297576218|gb|EFH94934.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus MN8] gi|298694517|gb|ADI97739.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ED133] gi|300886458|gb|EFK81660.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TCH70] gi|302332828|gb|ADL23021.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751047|gb|ADL65224.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340196|gb|EFM06137.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438399|gb|ADQ77470.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus TCH60] gi|312829618|emb|CBX34460.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131015|gb|EFT86999.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus CGS03] gi|315194110|gb|EFU24503.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus CGS00] gi|315198461|gb|EFU28790.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus CGS01] gi|320140961|gb|EFW32808.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus MRSA131] gi|320144324|gb|EFW36090.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus MRSA177] gi|323440999|gb|EGA98706.1| 50S ribosomal protein L28 [Staphylococcus aureus O11] gi|323442315|gb|EGA99945.1| 50S ribosomal protein L28 [Staphylococcus aureus O46] gi|329313893|gb|AEB88306.1| 50S ribosomal protein L28 [Staphylococcus aureus subsp. aureus T0131] gi|329724752|gb|EGG61257.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus 21189] gi|329727234|gb|EGG63690.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus 21172] gi|329728849|gb|EGG65270.1| ribosomal protein L28 [Staphylococcus aureus subsp. aureus 21193] Length = 62 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN+ SHA N T+RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|68072525|ref|XP_678176.1| 50S ribosomal subunit protein L28 [Plasmodium berghei strain ANKA] gi|56498558|emb|CAH93729.1| 50S ribosomal subunit protein L28, putative [Plasmodium berghei] Length = 215 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C + K + K+S + KT R N R + + + +LR+S L++++ Sbjct: 85 ARRCPILGKMDNRNARKISKSGIKTHRIQKVNFVRKRIYFEEENRFVKLRVSARGLKTIK 144 Query: 61 RQG 63 + G Sbjct: 145 KYG 147 >gi|73662857|ref|YP_301638.1| 50S ribosomal protein L28 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581587|sp|Q49X05|RL28_STAS1 RecName: Full=50S ribosomal protein L28 gi|72495372|dbj|BAE18693.1| 50S ribosomal protein L28 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 62 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N ++RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCFVTGRKASTGNNRSHALNSSKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|294500975|ref|YP_003564675.1| 50S ribosomal protein L28 [Bacillus megaterium QM B1551] gi|295706323|ref|YP_003599398.1| 50S ribosomal protein L28 [Bacillus megaterium DSM 319] gi|294350912|gb|ADE71241.1| 50S ribosomal protein L28 [Bacillus megaterium QM B1551] gi|294803982|gb|ADF41048.1| 50S ribosomal protein L28 [Bacillus megaterium DSM 319] Length = 62 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + SGN SHA N T+R++ N+ ++ ++ + + ++ +S AL+S Sbjct: 1 MARKCVVTGRKARSGNARSHAMNATKRKWGANVQKVRILVN--GKPKRVYVSARALKS 56 >gi|26553855|ref|NP_757789.1| ribosomal protein L28 [Mycoplasma penetrans HF-2] gi|67461530|sp|Q8EW04|RL28_MYCPE RecName: Full=50S ribosomal protein L28 gi|26453862|dbj|BAC44193.1| ribosomal protein L28 [Mycoplasma penetrans HF-2] Length = 82 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++V ++TKK M+GN SHA N +RRR+ NL ++ + D +++++ L+ ++ Sbjct: 1 MAKVDQITKKRAMTGNTRSHALNHSRRRWDLNLQKVKIY-DENNNIVEVKVTARTLKGLK 59 Query: 61 RQ 62 + Sbjct: 60 KN 61 >gi|14195139|sp|Q9MSA0|RK28_GALSU RecName: Full=50S ribosomal protein L28, chloroplastic Length = 68 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R C+L KT + NKVSH+N+K++R NL + + S + ++ +LRIS ++ + Sbjct: 1 MTRKCQLLFKTSNTANKVSHSNHKSKRLQFVNLQKKKVWSSLKKKWIKLRISTKMIKILN 60 Query: 61 RQGGLDRFL 69 ++ +D FL Sbjct: 61 KK-NIDYFL 68 >gi|310765970|gb|ADP10920.1| 50S ribosomal protein L28 [Erwinia sp. Ejp617] Length = 57 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 22 NNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENLSARM 81 N T+RRFLPNL + ++ LR+S +R ++++G + +L R Sbjct: 1 MNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG------IETVLADLRTRG 54 Query: 82 RT 83 Sbjct: 55 EK 56 >gi|71031208|ref|XP_765246.1| 60S ribosomal protein L28 [Theileria parva strain Muguga] gi|68352202|gb|EAN32963.1| 60S ribosomal protein L28, putative [Theileria parva] Length = 209 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 3 RVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 R C L K ++SH+ KTR+ NL + + + +LRI+ L++++R Sbjct: 99 RRCMLLGKMDNTKAMQISHSGVKTRKPQKLNLHWKRIWHPLKKYFIRLRITMRGLKTIKR 158 Query: 62 QGGLDR 67 G ++ Sbjct: 159 LGIVEA 164 >gi|163814177|ref|ZP_02205569.1| hypothetical protein COPEUT_00331 [Coprococcus eutactus ATCC 27759] gi|158450626|gb|EDP27621.1| hypothetical protein COPEUT_00331 [Coprococcus eutactus ATCC 27759] Length = 81 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K G KVSH++ + + + N+ + + D + ++ + LRS Sbjct: 21 MAK-CSICDKGAHFGIKVSHSHRRANKMWKSNVKAVKAVVDGTPK--KIYVCTSCLRS 75 >gi|210615636|ref|ZP_03290682.1| hypothetical protein CLONEX_02900 [Clostridium nexile DSM 1787] gi|210150179|gb|EEA81188.1| hypothetical protein CLONEX_02900 [Clostridium nexile DSM 1787] Length = 62 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ KT + + N+ + + ++ ++ + L+S Sbjct: 1 MAK-CAICEKGAHFGNNVSHSHRKTPKMWKSNVKSVRVKAEG-GNTKKMYVCTSCLKS 56 >gi|238916887|ref|YP_002930404.1| hypothetical protein EUBELI_00956 [Eubacterium eligens ATCC 27750] gi|259646737|sp|C4Z044|RL28_EUBE2 RecName: Full=50S ribosomal protein L28 gi|238872247|gb|ACR71957.1| Hypothetical protein EUBELI_00956 [Eubacterium eligens ATCC 27750] Length = 61 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + ++ + LRS Sbjct: 1 MAK-CAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAK--KMYVCTSCLRS 55 >gi|323489543|ref|ZP_08094770.1| 50S ribosomal protein L28 [Planococcus donghaensis MPA1U2] gi|323396674|gb|EGA89493.1| 50S ribosomal protein L28 [Planococcus donghaensis MPA1U2] Length = 62 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M +VC ++ + +GN SHA N T+R + NL ++ ++ D + ++ +S A++S Sbjct: 1 MPKVCAVSGRKARAGNARSHAMNSTKRTWGANLQKVRILVD--GKPKRVWVSARAMKS 56 >gi|291524766|emb|CBK90353.1| LSU ribosomal protein L28P [Eubacterium rectale DSM 17629] gi|291528913|emb|CBK94499.1| LSU ribosomal protein L28P [Eubacterium rectale M104/1] Length = 61 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K V GN VSH++ ++ + N+ +++ + + Q +L + LRS Sbjct: 1 MAK-CAICEKGVHYGNNVSHSHRRSNHVWKSNIKKVSCKVNGVPQ--KLYVCTSCLRS 55 >gi|222530165|ref|YP_002574047.1| 50S ribosomal protein L28 [Caldicellulosiruptor bescii DSM 6725] gi|302872595|ref|YP_003841231.1| ribosomal protein L28 [Caldicellulosiruptor obsidiansis OB47] gi|312126797|ref|YP_003991671.1| 50S ribosomal protein L28 [Caldicellulosiruptor hydrothermalis 108] gi|312135879|ref|YP_004003217.1| 50S ribosomal protein L28 [Caldicellulosiruptor owensensis OL] gi|312792619|ref|YP_004025542.1| 50S ribosomal protein L28 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877946|ref|ZP_07737889.1| ribosomal protein L28 [Caldicellulosiruptor lactoaceticus 6A] gi|254801496|sp|B9MM51|RL28_ANATD RecName: Full=50S ribosomal protein L28 gi|222457012|gb|ACM61274.1| ribosomal protein L28 [Caldicellulosiruptor bescii DSM 6725] gi|302575454|gb|ADL43245.1| ribosomal protein L28 [Caldicellulosiruptor obsidiansis OB47] gi|311775930|gb|ADQ05417.1| ribosomal protein L28 [Caldicellulosiruptor owensensis OL] gi|311776816|gb|ADQ06302.1| ribosomal protein L28 [Caldicellulosiruptor hydrothermalis 108] gi|311795296|gb|EFR11682.1| ribosomal protein L28 [Caldicellulosiruptor lactoaceticus 6A] gi|312179759|gb|ADQ39929.1| ribosomal protein L28 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 62 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 CE+ K V GNKVSH+N K+RR + PN+ +I ++ Q+ ++ + ++ Sbjct: 4 CEVCGKKVAFGNKVSHSNKKSRRTWKPNVKKIKVLL-QNGQRKRIYVCTSCIK 55 >gi|322374036|ref|ZP_08048570.1| ribosomal protein L28 [Streptococcus sp. C150] gi|321277002|gb|EFX54073.1| ribosomal protein L28 [Streptococcus sp. C150] Length = 62 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +S N SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSANNRSHAMNKTKRAVKPNLQKVTILVD--GKPKKVWASARALKS 56 >gi|325478664|gb|EGC81775.1| ribosomal protein L28 [Anaerococcus prevotii ACS-065-V-Col13] Length = 62 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C++ K SG V+ ++ + R F N+ ++ + D + + L+S Sbjct: 1 MARACDICGKGTKSGKAVTFSHRQINRTFKANVHKVKALVDGTPKTI--NVCTKCLKS 56 >gi|312621545|ref|YP_004023158.1| 50S ribosomal protein L28 [Caldicellulosiruptor kronotskyensis 2002] gi|312202012|gb|ADQ45339.1| ribosomal protein L28 [Caldicellulosiruptor kronotskyensis 2002] Length = 62 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 CE+ K V GNKVSH+N K+RR + PN+ +I ++ Q+ ++ + ++ Sbjct: 4 CEVCGKKVAFGNKVSHSNKKSRRTWKPNVKKIKVLL-QNGQRKRIYVCTSCIK 55 >gi|82541511|ref|XP_724993.1| ribosomal protein L28 [Plasmodium yoelii yoelii str. 17XNL] gi|23479831|gb|EAA16558.1| ribosomal protein L28, putative [Plasmodium yoelii yoelii] Length = 174 Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C + K + K+S + KT + N R + + ++ +LR+S L++++ Sbjct: 34 ARRCPILGKMDNRNARKISKSGIKTHKIQRVNFVRKRIYFEEEDRFVKLRVSARGLKTIK 93 Query: 61 RQG 63 + G Sbjct: 94 KYG 96 >gi|27467817|ref|NP_764454.1| 50S ribosomal protein L28 [Staphylococcus epidermidis ATCC 12228] gi|57866770|ref|YP_188373.1| 50S ribosomal protein L28 [Staphylococcus epidermidis RP62A] gi|242242506|ref|ZP_04796951.1| 50S ribosomal protein L28 [Staphylococcus epidermidis W23144] gi|251810654|ref|ZP_04825127.1| 50S ribosomal protein L28 [Staphylococcus epidermidis BCM-HMP0060] gi|282876344|ref|ZP_06285211.1| ribosomal protein L28 [Staphylococcus epidermidis SK135] gi|293366811|ref|ZP_06613487.1| 50S ribosomal protein L28 [Staphylococcus epidermidis M23864:W2(grey)] gi|38258575|sp|Q8CSV6|RL28_STAES RecName: Full=50S ribosomal protein L28 gi|67461259|sp|Q5HPW7|RL28_STAEQ RecName: Full=50S ribosomal protein L28 gi|27315361|gb|AAO04496.1|AE016746_286 50S ribosomal protein L28 [Staphylococcus epidermidis ATCC 12228] gi|57637428|gb|AAW54216.1| ribosomal protein L28 [Staphylococcus epidermidis RP62A] gi|242234080|gb|EES36392.1| 50S ribosomal protein L28 [Staphylococcus epidermidis W23144] gi|251805814|gb|EES58471.1| 50S ribosomal protein L28 [Staphylococcus epidermidis BCM-HMP0060] gi|281295369|gb|EFA87896.1| ribosomal protein L28 [Staphylococcus epidermidis SK135] gi|291319112|gb|EFE59482.1| 50S ribosomal protein L28 [Staphylococcus epidermidis M23864:W2(grey)] gi|319401483|gb|EFV89693.1| ribosomal protein L28 [Staphylococcus epidermidis FRI909] gi|329729982|gb|EGG66373.1| ribosomal protein L28 [Staphylococcus epidermidis VCU144] gi|329736277|gb|EGG72549.1| ribosomal protein L28 [Staphylococcus epidermidis VCU028] gi|329736559|gb|EGG72825.1| ribosomal protein L28 [Staphylococcus epidermidis VCU045] Length = 62 Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M + C +T + +GN SHA N +RR+ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MGKQCFVTGRKASTGNHRSHALNANKRRWNANLQKVRILVD--GKPKKVWVSARALKS 56 >gi|58337587|ref|YP_194172.1| 50S ribosomal protein L28 [Lactobacillus acidophilus NCFM] gi|227904227|ref|ZP_04022032.1| 50S ribosomal protein L28 [Lactobacillus acidophilus ATCC 4796] gi|67461232|sp|Q5FJI3|RL28_LACAC RecName: Full=50S ribosomal protein L28 gi|58254904|gb|AAV43141.1| 50s ribosomal protein RL28 [Lactobacillus acidophilus NCFM] gi|227867875|gb|EEJ75296.1| 50S ribosomal protein L28 [Lactobacillus acidophilus ATCC 4796] Length = 61 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GNK SH+ N TRR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DYVTGKKTTFGNKRSHSLNPTRRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|125973794|ref|YP_001037704.1| 50S ribosomal protein L28P [Clostridium thermocellum ATCC 27405] gi|256004525|ref|ZP_05429504.1| ribosomal protein L28 [Clostridium thermocellum DSM 2360] gi|281417951|ref|ZP_06248971.1| ribosomal protein L28 [Clostridium thermocellum JW20] gi|166226567|sp|A3DEY2|RL28_CLOTH RecName: Full=50S ribosomal protein L28 gi|125714019|gb|ABN52511.1| LSU ribosomal protein L28P [Clostridium thermocellum ATCC 27405] gi|255991530|gb|EEU01633.1| ribosomal protein L28 [Clostridium thermocellum DSM 2360] gi|281409353|gb|EFB39611.1| ribosomal protein L28 [Clostridium thermocellum JW20] gi|316940013|gb|ADU74047.1| ribosomal protein L28 [Clostridium thermocellum DSM 1313] Length = 62 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C++ K V+ G KVSH+N KT R + PN+ RI +I + LRS Sbjct: 1 MAK-CDICSKDVLFGLKVSHSNRKTNRTWKPNIRRIKII--ENGTSKTANVCTRCLRS 55 >gi|326201981|ref|ZP_08191851.1| ribosomal protein L28 [Clostridium papyrosolvens DSM 2782] gi|325987776|gb|EGD48602.1| ribosomal protein L28 [Clostridium papyrosolvens DSM 2782] Length = 62 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K GN SHA N T R + PN+ +I +I + + I LRS Sbjct: 1 MAK-CEVCSKATTFGNNRSHALNATSRTWKPNVRKIKIIDNGTPKSI--NICTRCLRS 55 >gi|119489302|ref|ZP_01622109.1| 50S ribosomal protein L28 [Lyngbya sp. PCC 8106] gi|119454776|gb|EAW35921.1| 50S ribosomal protein L28 [Lyngbya sp. PCC 8106] Length = 63 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 27/46 (58%) Query: 18 VSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 VSH++ +T + PNL + ++ +L+IS A++++E +G Sbjct: 3 VSHSHRRTHKLQQPNLQWKRIWWPQGKRWVRLKISTKAIKTLETKG 48 >gi|188996792|ref|YP_001931043.1| ribosomal protein L28 [Sulfurihydrogenibium sp. YO3AOP1] gi|226699174|sp|B2V966|RL28_SULSY RecName: Full=50S ribosomal protein L28 gi|188931859|gb|ACD66489.1| ribosomal protein L28 [Sulfurihydrogenibium sp. YO3AOP1] Length = 63 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 VC++ K + GN V+H+ RR + PNL R+ ++ + ++ + L+ Sbjct: 3 VCQICGKKTVFGNTVAHSATTERRTWKPNLRRVRVVLED-GSTKRIYVCAKCLK 55 >gi|332799413|ref|YP_004460912.1| 50S ribosomal protein L28 [Tepidanaerobacter sp. Re1] gi|332697148|gb|AEE91605.1| 50S ribosomal protein L28 [Tepidanaerobacter sp. Re1] Length = 62 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K G ++SH++ K++R + PN+ R+ D+ + ++ + LRS Sbjct: 1 MAK-CEVCGKLPRKGIQLSHSHRKSKRTWAPNIRRVKA--DLNGRTKRINVCTSCLRS 55 >gi|331089643|ref|ZP_08338542.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 3_1_46FAA] gi|331091216|ref|ZP_08340057.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404663|gb|EGG84202.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405011|gb|EGG84549.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 3_1_46FAA] Length = 61 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ KT + + N+ + + ++ ++ + L+S Sbjct: 1 MAK-CAICEKGAHFGNNVSHSHRKTPKMWKSNVKSVRVKTE--GGSKKMYVCTSCLKS 55 >gi|23098969|ref|NP_692435.1| 50S ribosomal protein L28 [Oceanobacillus iheyensis HTE831] gi|67461529|sp|Q8ER17|RL28_OCEIH RecName: Full=50S ribosomal protein L28 gi|22777197|dbj|BAC13470.1| 50S ribosomal protein L28 [Oceanobacillus iheyensis HTE831] Length = 62 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + SGN+ SHA N +R + N+ ++ ++ D + ++ +S AL+S Sbjct: 1 MARKCVVTGRQTRSGNQRSHAMNSNKRNWKANVQKVRIMVD--GKPKKVYVSARALKS 56 >gi|225848237|ref|YP_002728400.1| 50S ribosomal protein L28 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643928|gb|ACN98978.1| ribosomal protein L28 [Sulfurihydrogenibium azorense Az-Fu1] Length = 63 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 VC++ K + GN V+H+ RR + PNL R+ +I + ++ + L+ Sbjct: 3 VCQVCGKKTVFGNTVAHSATTERRTWKPNLRRVRVILED-GSTKRIYVCAKCLK 55 >gi|325264002|ref|ZP_08130735.1| ribosomal protein L28 [Clostridium sp. D5] gi|324031040|gb|EGB92322.1| ribosomal protein L28 [Clostridium sp. D5] Length = 62 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M C + +K GN VSH++ K+ + + N+ + + ++ ++ + L+S Sbjct: 1 MMAKCAICEKGAHFGNNVSHSHRKSPKMWKSNVKSVRVKTE--GGSKKMYVCTSCLKS 56 >gi|312984223|ref|ZP_07791569.1| ribosomal protein L28 [Lactobacillus crispatus CTV-05] gi|310894442|gb|EFQ43518.1| ribosomal protein L28 [Lactobacillus crispatus CTV-05] Length = 58 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GNK SH+ N TRR + PNL ++ ++ D + ++ +S AL+S Sbjct: 3 VTGKKTTFGNKRSHSLNSTRRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 52 >gi|237756241|ref|ZP_04584802.1| ribosomal protein L28 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691599|gb|EEP60646.1| ribosomal protein L28 [Sulfurihydrogenibium yellowstonense SS-5] Length = 63 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 +C++ K + GN V+H+ RR + PNL R+ ++ + ++ + L+ Sbjct: 3 ICQICGKKTVFGNTVAHSATTERRTWKPNLRRVRVVLED-GSTKRIYVCAKCLK 55 >gi|167745674|ref|ZP_02417801.1| hypothetical protein ANACAC_00366 [Anaerostipes caccae DSM 14662] gi|317472732|ref|ZP_07932046.1| ribosomal L28 family protein [Anaerostipes sp. 3_2_56FAA] gi|167654986|gb|EDR99115.1| hypothetical protein ANACAC_00366 [Anaerostipes caccae DSM 14662] gi|316899810|gb|EFV21810.1| ribosomal L28 family protein [Anaerostipes sp. 3_2_56FAA] Length = 61 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ + + N+ + + + ++ + LRS Sbjct: 1 MAK-CAICGKGAHFGNAVSHSHRRSNKMWKSNIKSVRVKVN--GAAKKMYVCTSCLRS 55 >gi|227878875|ref|ZP_03996780.1| ribosomal protein L28 [Lactobacillus crispatus JV-V01] gi|256843389|ref|ZP_05548877.1| 50S ribosomal protein L28 [Lactobacillus crispatus 125-2-CHN] gi|256849789|ref|ZP_05555220.1| 50s ribosomal protein RL28 [Lactobacillus crispatus MV-1A-US] gi|262046966|ref|ZP_06019926.1| 50S ribosomal protein L28 [Lactobacillus crispatus MV-3A-US] gi|293380319|ref|ZP_06626393.1| 50S ribosomal protein L28 [Lactobacillus crispatus 214-1] gi|227861509|gb|EEJ69123.1| ribosomal protein L28 [Lactobacillus crispatus JV-V01] gi|256614809|gb|EEU20010.1| 50S ribosomal protein L28 [Lactobacillus crispatus 125-2-CHN] gi|256713278|gb|EEU28268.1| 50s ribosomal protein RL28 [Lactobacillus crispatus MV-1A-US] gi|260572948|gb|EEX29508.1| 50S ribosomal protein L28 [Lactobacillus crispatus MV-3A-US] gi|290923134|gb|EFE00063.1| 50S ribosomal protein L28 [Lactobacillus crispatus 214-1] Length = 61 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GNK SH+ N TRR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DYVTGKKTTFGNKRSHSLNSTRRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|270290365|ref|ZP_06196590.1| 50S ribosomal protein L28 [Pediococcus acidilactici 7_4] gi|304384757|ref|ZP_07367103.1| 50S ribosomal protein L28 [Pediococcus acidilactici DSM 20284] gi|270281146|gb|EFA26979.1| 50S ribosomal protein L28 [Pediococcus acidilactici 7_4] gi|304328951|gb|EFL96171.1| 50S ribosomal protein L28 [Pediococcus acidilactici DSM 20284] Length = 61 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GN SHA N +RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DFVTGKRTSFGNTRSHALNHSRRSWKPNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|52080185|ref|YP_078976.1| 50S ribosomal protein L28 [Bacillus licheniformis ATCC 14580] gi|52785562|ref|YP_091391.1| 50S ribosomal protein L28 [Bacillus licheniformis ATCC 14580] gi|67461370|sp|Q65JR6|RL28_BACLD RecName: Full=50S ribosomal protein L28 gi|52003396|gb|AAU23338.1| ribosomal protein L28 [Bacillus licheniformis ATCC 14580] gi|52348064|gb|AAU40698.1| RpmB [Bacillus licheniformis ATCC 14580] Length = 62 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+R C +T + SGN SHA N ++R + N+ ++ ++ + + ++ +S AL+S Sbjct: 1 MARKCVITGRKSRSGNSRSHAMNASKRTWGANVQKVRILVN--GKPKKVYVSARALKS 56 >gi|116492603|ref|YP_804338.1| 50S ribosomal protein L28 [Pediococcus pentosaceus ATCC 25745] gi|122265933|sp|Q03FX6|RL28_PEDPA RecName: Full=50S ribosomal protein L28 gi|116102753|gb|ABJ67896.1| LSU ribosomal protein L28P [Pediococcus pentosaceus ATCC 25745] Length = 61 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GN SHA N +RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DFVTGKHTRFGNTRSHALNHSRRSWKPNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|166031904|ref|ZP_02234733.1| hypothetical protein DORFOR_01605 [Dorea formicigenerans ATCC 27755] gi|166028357|gb|EDR47114.1| hypothetical protein DORFOR_01605 [Dorea formicigenerans ATCC 27755] Length = 62 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ K+ + + N+ + + ++ ++ + L+S Sbjct: 1 MAK-CAICEKGAHFGNNVSHSHRKSPKMWKSNVKSVRVKTE-NGATKRMYVCTSCLKS 56 >gi|39938592|ref|NP_950358.1| 50S ribosomal protein L28 [Onion yellows phytoplasma OY-M] gi|67461438|sp|Q6YRA9|RL28_ONYPE RecName: Full=50S ribosomal protein L28 gi|39721701|dbj|BAD04191.1| ribosomal protein L28 [Onion yellows phytoplasma OY-M] Length = 62 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+ C +T KT + GN+ SHA N T+R + NL + + D + +++IS AL+ Sbjct: 1 MSK-CYITGKTTLFGNRRSHAMNATKRIWKANLQNVKI-VDENGKVQKVKISARALK 55 >gi|24378640|ref|NP_720595.1| 50S ribosomal protein L28 [Streptococcus mutans UA159] gi|290579636|ref|YP_003484028.1| 50S ribosomal protein L28 [Streptococcus mutans NN2025] gi|67461523|sp|Q8DWE1|RL28_STRMU RecName: Full=50S ribosomal protein L28 gi|24376498|gb|AAN57901.1|AE014863_9 50S ribosomal protein L28 [Streptococcus mutans UA159] gi|254996535|dbj|BAH87136.1| 50S ribosomal protein L28 [Streptococcus mutans NN2025] Length = 62 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + +S N SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTVSANNRSHAMNKTKRVAKPNLQKVTVLID--GKPKKVWASARALKS 56 >gi|225850048|ref|YP_002730282.1| 50S ribosomal protein L28 [Persephonella marina EX-H1] gi|254801371|sp|C0QUB7|RL28_PERMH RecName: Full=50S ribosomal protein L28 gi|225646029|gb|ACO04215.1| ribosomal protein L28 [Persephonella marina EX-H1] Length = 64 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 VC++ K GN+V+H+ T+R + PNL ++ + ++ + L+ Sbjct: 3 VCQICGKKTAHGNRVAHSATTTKRTWKPNLQKVKAVLPD-GTTKKIYVCAKCLK 55 >gi|163785138|ref|ZP_02179836.1| ribosomal protein L28 [Hydrogenivirga sp. 128-5-R1-1] gi|159879592|gb|EDP73398.1| ribosomal protein L28 [Hydrogenivirga sp. 128-5-R1-1] Length = 61 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 VC++ K GN+V+H+ T+R + PNL ++ ++ + L+ Sbjct: 1 VCQICGKKTTFGNRVAHSATTTKRTWRPNLQKVKARL-SDGTVKKIYVCTKCLK 53 >gi|227484660|ref|ZP_03914976.1| possible ribosomal protein L28 [Anaerococcus lactolyticus ATCC 51172] gi|227237380|gb|EEI87395.1| possible ribosomal protein L28 [Anaerococcus lactolyticus ATCC 51172] Length = 62 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSR C++ K SG V+ ++ + R F N+ +I I D + ++S Sbjct: 1 MSRACDICGKGTASGKTVTFSHRQINRTFKANVHKIKAIVDGTPKTI--NACTKCIKS 56 >gi|325661170|ref|ZP_08149797.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085074|ref|ZP_08334161.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472677|gb|EGC75888.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408774|gb|EGG88239.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 61 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH+N KT + + N+ + + ++ ++ + L+S Sbjct: 1 MAK-CAICEKGAHFGNNVSHSNRKTPKMWKSNVKSVRVKTE--GGSKKMYVCTSCLKS 55 >gi|167765569|ref|ZP_02437633.1| hypothetical protein CLOSS21_00063 [Clostridium sp. SS2/1] gi|317498525|ref|ZP_07956819.1| ribosomal L28 family protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167712754|gb|EDS23333.1| hypothetical protein CLOSS21_00063 [Clostridium sp. SS2/1] gi|291559035|emb|CBL37835.1| LSU ribosomal protein L28P [butyrate-producing bacterium SSC/2] gi|316894218|gb|EFV16406.1| ribosomal L28 family protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 61 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ + + N+ + + + ++ + LRS Sbjct: 1 MAK-CAICGKGAHFGNAVSHSHRRSNKMWKSNIKSVKVKVN--GAAKKMYVCTSCLRS 55 >gi|225389060|ref|ZP_03758784.1| hypothetical protein CLOSTASPAR_02805 [Clostridium asparagiforme DSM 15981] gi|225044882|gb|EEG55128.1| hypothetical protein CLOSTASPAR_02805 [Clostridium asparagiforme DSM 15981] Length = 61 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ + + + N+ + + + ++ + LRS Sbjct: 1 MAK-CAICEKAAHFGNSVSHSHRRANKMWKANVKSVKVKVN--GGTQRMYVCTSCLRS 55 >gi|154482526|ref|ZP_02024974.1| hypothetical protein EUBVEN_00193 [Eubacterium ventriosum ATCC 27560] gi|149736656|gb|EDM52542.1| hypothetical protein EUBVEN_00193 [Eubacterium ventriosum ATCC 27560] Length = 61 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ + + N+ + + ++ ++ + L+S Sbjct: 1 MAK-CSICGKGAHFGNAVSHSHRRSNKMWKSNIKSVRVKTE--GGSKKMYVCTSCLKS 55 >gi|260587800|ref|ZP_05853713.1| ribosomal protein L28 [Blautia hansenii DSM 20583] gi|331083801|ref|ZP_08332910.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542065|gb|EEX22634.1| ribosomal protein L28 [Blautia hansenii DSM 20583] gi|330403226|gb|EGG82786.1| 50S ribosomal protein L28 [Lachnospiraceae bacterium 6_1_63FAA] Length = 62 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + ++ K ++ + LRS Sbjct: 1 MAK-CAICEKGAHFGNNVSHSHRRSNKMWKSNIKSVRVKTEGGNAK-KMYVCTSCLRS 56 >gi|193216434|ref|YP_001999676.1| ribosomal protein L28 [Mycoplasma arthritidis 158L3-1] gi|226732839|sp|B3PLS0|RL28_MYCA5 RecName: Full=50S ribosomal protein L28 gi|193001757|gb|ACF06972.1| ribosomal protein L28 [Mycoplasma arthritidis 158L3-1] Length = 65 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M +LT + +SGNK SHA N T+R F NL ++T++ + K LR++ R+++ Sbjct: 1 MPGRDQLTGQKALSGNKRSHALNTTKRTFDLNLQKVTVLQE-NGTKKTLRVTAKNARTLK 59 Query: 61 RQG 63 + G Sbjct: 60 KLG 62 >gi|146417531|ref|XP_001484734.1| hypothetical protein PGUG_02463 [Meyerozyma guilliermondii ATCC 6260] Length = 255 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S A NK R LPN+ + L S+ + + Q +++ LR+V ++GGLD +L+ ++ + Sbjct: 96 SEAGNKNLRAHLPNIVKAKLWSETLNKSIQTKVTTTVLRTVTKEGGLDNYLTKDKPARVK 155 Query: 76 NLSARMRTLRSQILKK 91 L + LR +++KK Sbjct: 156 TLGLKGWKLRYEVMKK 171 >gi|312866259|ref|ZP_07726478.1| putative ribosomal protein L28 [Streptococcus downei F0415] gi|311098232|gb|EFQ56457.1| putative ribosomal protein L28 [Streptococcus downei F0415] Length = 62 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++VC T + S N SHA NKT+R PNL ++T++ D + ++ S AL+S Sbjct: 1 MAKVCYFTGRKTKSANNRSHAMNKTKRAVKPNLQKVTILVD--GKPKKVWASARALKS 56 >gi|190346312|gb|EDK38365.2| hypothetical protein PGUG_02463 [Meyerozyma guilliermondii ATCC 6260] Length = 255 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSN---SKKE 75 S A NK R LPN+ + L S+ + + Q +++ LR+V ++GGLD +L+ ++ + Sbjct: 96 SEAGNKNLRAHLPNIVKAKLWSETLNKSIQTKVTTTVLRTVTKEGGLDNYLTKDKPARVK 155 Query: 76 NLSARMRTLRSQILKK 91 L + LR +++KK Sbjct: 156 TLGLKGWKLRYEVMKK 171 >gi|114776359|ref|ZP_01451404.1| 50S ribosomal protein L28 [Mariprofundus ferrooxydans PV-1] gi|114553189|gb|EAU55587.1| 50S ribosomal protein L28 [Mariprofundus ferrooxydans PV-1] Length = 51 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 MSGN VSHA+N T+RRFLPNL ++ I + Q ++++ LRS Sbjct: 1 MSGNNVSHAHNTTKRRFLPNLMQVRAIVN--GQTSKIKVCASCLRS 44 >gi|212639607|ref|YP_002316127.1| 50S ribosomal protein L28 [Anoxybacillus flavithermus WK1] gi|212561087|gb|ACJ34142.1| Ribosomal protein L28 [Anoxybacillus flavithermus WK1] Length = 69 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T K GN SHA N RR + NL ++ ++ D + ++ +S AL+S Sbjct: 9 MAK-CFVTGKKKSFGNARSHAMNANRRTWKANLQKVRILVD--GKPKRVWVSARALKS 63 >gi|72080462|ref|YP_287520.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae 7448] gi|123645231|sp|Q4A8P2|RL28_MYCH7 RecName: Full=50S ribosomal protein L28 gi|71913586|gb|AAZ53497.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae 7448] Length = 64 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +++ + +SGN SHA N T+R+F NL +ITL + +K +L++S +++ Sbjct: 1 MARKDQISHRGPLSGNNRSHALNATKRKFNLNLQQITLKT-ASGKKIRLKVSAKTKKTLR 59 Query: 61 RQG 63 + G Sbjct: 60 KWG 62 >gi|296004506|ref|XP_002808674.1| organelle ribosomal protein L28 precursor, putative [Plasmodium falciparum 3D7] gi|225631659|emb|CAX63945.1| organelle ribosomal protein L28 precursor, putative [Plasmodium falciparum 3D7] Length = 262 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 3 RVCELTKKTVM-SGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 R C + K + K+S + +T R NL + + + ++++S L+++++ Sbjct: 128 RRCAILGKMDNWNARKISKSGVRTHRIQRLNLINKRIFFEEENRFIKMKVSAKGLKTIKK 187 Query: 62 QG 63 G Sbjct: 188 YG 189 >gi|299821762|ref|ZP_07053650.1| 50S ribosomal protein L28 [Listeria grayi DSM 20601] gi|299817427|gb|EFI84663.1| 50S ribosomal protein L28 [Listeria grayi DSM 20601] Length = 62 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T + SGNK SHA N ++R + NL ++ ++ + + ++ +S AL+S Sbjct: 1 MAKECVITGRRSRSGNKRSHAMNYSKRTWKANLQKVRILVN--GKPKKVWVSARALKS 56 >gi|320160927|ref|YP_004174151.1| putative 50S ribosomal protein L28 [Anaerolinea thermophila UNI-1] gi|319994780|dbj|BAJ63551.1| putative 50S ribosomal protein L28 [Anaerolinea thermophila UNI-1] Length = 60 Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ CE K + G++ S + T R F PNL ++ +I +K + +R++ Sbjct: 1 MAK-CENCGKKTVFGHRRSFSMRATNRAFRPNLQKVLVI--ENGRKVHKVLCTKCIRTMV 57 Query: 61 RQ 62 + Sbjct: 58 KA 59 >gi|71893475|ref|YP_278921.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae J] gi|123645950|sp|Q4AAL1|RL28_MYCHJ RecName: Full=50S ribosomal protein L28 gi|71851602|gb|AAZ44210.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae J] gi|312601647|gb|ADQ90902.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae 168] Length = 64 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +++ + +SGN SHA N T+R+F NL +ITL + +K +L++S +++ Sbjct: 1 MARKDQISHRGPLSGNNRSHALNATKRKFNLNLQQITLKT-ASGKKIRLKVSAKTKKTLR 59 Query: 61 RQG 63 + G Sbjct: 60 KWG 62 >gi|220929302|ref|YP_002506211.1| 50S ribosomal protein L28 [Clostridium cellulolyticum H10] gi|254801351|sp|B8I388|RL28_CLOCE RecName: Full=50S ribosomal protein L28 gi|219999630|gb|ACL76231.1| ribosomal protein L28 [Clostridium cellulolyticum H10] Length = 62 Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K GN SHA N T R + PN+ +I +I + + +I LRS Sbjct: 1 MAK-CEVCSKATSFGNSRSHALNATSRTWKPNVRKIKIIDNGTPRSI--KICTRCLRS 55 >gi|291545909|emb|CBL19017.1| LSU ribosomal protein L28P [Ruminococcus sp. SR1/5] Length = 62 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K GN VSH++ ++ + + N+ + + + K ++ + LRS Sbjct: 1 MAK-CAICDKGAHFGNNVSHSHRRSNKMWKSNVKSVRVKTTAGGAK-KMYVCTSCLRS 56 >gi|332844914|ref|XP_003314941.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L28, mitochondrial-like [Pan troglodytes] Length = 261 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 46 KYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 K+ + + L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 127 KFTVTVIMRTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 177 >gi|85057883|ref|YP_456799.1| 50S ribosomal protein L28 [Aster yellows witches'-broom phytoplasma AYWB] gi|123518063|sp|Q2NIM3|RL28_AYWBP RecName: Full=50S ribosomal protein L28 gi|84789988|gb|ABC65720.1| LSU ribosomal protein L28P [Aster yellows witches'-broom phytoplasma AYWB] Length = 62 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+ C +T KT + GN+ SHA N T+R + NL + + D + +++IS AL+ Sbjct: 1 MSK-CYITGKTTLFGNRRSHAMNATKRIWKANLQNVKI-IDENGKIQKVKISARALK 55 >gi|269114781|ref|YP_003302544.1| 50S ribosomal protein L28 [Mycoplasma hominis] gi|268322406|emb|CAX37141.1| 50S ribosomal protein L28 [Mycoplasma hominis ATCC 23114] Length = 65 Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M +LT + +SGNK SHA N +R F NL ++T++++ K +R++ R+++ Sbjct: 1 MPGRDQLTGQKALSGNKRSHALNTAKRTFDLNLQKVTVLTE-TGSKKTVRVTAKNARTLK 59 Query: 61 RQG 63 + G Sbjct: 60 KYG 62 >gi|291522170|emb|CBK80463.1| LSU ribosomal protein L28P [Coprococcus catus GD/7] Length = 61 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K G +VSH++ ++ + + N+ ++ + + ++ + LRS Sbjct: 1 MAK-CAICEKGAHFGIQVSHSHRRSNKMWKSNIKKVKVNVN--GTPSKMYVCTSCLRS 55 >gi|16800996|ref|NP_471264.1| 50S ribosomal protein L28 [Listeria innocua Clip11262] gi|16803856|ref|NP_465341.1| 50S ribosomal protein L28 [Listeria monocytogenes EGD-e] gi|46908048|ref|YP_014437.1| 50S ribosomal protein L28 [Listeria monocytogenes serotype 4b str. F2365] gi|47093053|ref|ZP_00230831.1| ribosomal protein L28 [Listeria monocytogenes str. 4b H7858] gi|47096537|ref|ZP_00234127.1| ribosomal protein L28 [Listeria monocytogenes str. 1/2a F6854] gi|116873251|ref|YP_850032.1| 50S ribosomal protein L28 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217964031|ref|YP_002349709.1| ribosomal protein L28 [Listeria monocytogenes HCC23] gi|224500047|ref|ZP_03668396.1| 50S ribosomal protein L28 [Listeria monocytogenes Finland 1988] gi|224501382|ref|ZP_03669689.1| 50S ribosomal protein L28 [Listeria monocytogenes FSL R2-561] gi|226224419|ref|YP_002758526.1| ribosomal protein L28 [Listeria monocytogenes Clip81459] gi|254826142|ref|ZP_05231143.1| rpmB [Listeria monocytogenes FSL J1-194] gi|254829189|ref|ZP_05233876.1| ribosomal protein L28 [Listeria monocytogenes FSL N3-165] gi|254831582|ref|ZP_05236237.1| 50S ribosomal protein L28 [Listeria monocytogenes 10403S] gi|254852723|ref|ZP_05242071.1| ribosomal protein L28 [Listeria monocytogenes FSL R2-503] gi|254899487|ref|ZP_05259411.1| 50S ribosomal protein L28 [Listeria monocytogenes J0161] gi|254912374|ref|ZP_05262386.1| ribosomal protein L28 [Listeria monocytogenes J2818] gi|254933288|ref|ZP_05266647.1| ribosomal protein L28 [Listeria monocytogenes HPB2262] gi|254936701|ref|ZP_05268398.1| ribosomal protein L28 [Listeria monocytogenes F6900] gi|254993906|ref|ZP_05276096.1| 50S ribosomal protein L28 [Listeria monocytogenes FSL J2-064] gi|255027024|ref|ZP_05299010.1| 50S ribosomal protein L28 [Listeria monocytogenes FSL J2-003] gi|255521931|ref|ZP_05389168.1| 50S ribosomal protein L28 [Listeria monocytogenes FSL J1-175] gi|284802262|ref|YP_003414127.1| 50S ribosomal protein L28 [Listeria monocytogenes 08-5578] gi|284995404|ref|YP_003417172.1| 50S ribosomal protein L28 [Listeria monocytogenes 08-5923] gi|289435159|ref|YP_003465031.1| 50S ribosomal protein L28 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|290893054|ref|ZP_06556043.1| ribosomal protein L28 [Listeria monocytogenes FSL J2-071] gi|300763871|ref|ZP_07073868.1| ribosomal protein L28 [Listeria monocytogenes FSL N1-017] gi|315282817|ref|ZP_07871140.1| ribosomal protein L28 [Listeria marthii FSL S4-120] gi|315303718|ref|ZP_07874231.1| ribosomal protein L28 [Listeria ivanovii FSL F6-596] gi|54039148|sp|P66145|RL28_LISIN RecName: Full=50S ribosomal protein L28 gi|54041848|sp|P66144|RL28_LISMO RecName: Full=50S ribosomal protein L28 gi|67461450|sp|Q71YK0|RL28_LISMF RecName: Full=50S ribosomal protein L28 gi|123466447|sp|A0AJS1|RL28_LISW6 RecName: Full=50S ribosomal protein L28 gi|254801366|sp|B8DDT6|RL28_LISMH RecName: Full=50S ribosomal protein L28 gi|259646744|sp|C1KWB5|RL28_LISMC RecName: Full=50S ribosomal protein L28 gi|16411270|emb|CAC99894.1| ribosomal protein L28 [Listeria monocytogenes EGD-e] gi|16414431|emb|CAC97160.1| ribosomal protein L28 [Listeria innocua Clip11262] gi|46881318|gb|AAT04614.1| ribosomal protein L28 [Listeria monocytogenes serotype 4b str. F2365] gi|47015069|gb|EAL06012.1| ribosomal protein L28 [Listeria monocytogenes str. 1/2a F6854] gi|47018554|gb|EAL09309.1| ribosomal protein L28 [Listeria monocytogenes str. 4b H7858] gi|116742129|emb|CAK21253.1| ribosomal protein L28 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217333301|gb|ACK39095.1| ribosomal protein L28 [Listeria monocytogenes HCC23] gi|225876881|emb|CAS05590.1| ribosomal protein L28 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601599|gb|EEW14924.1| ribosomal protein L28 [Listeria monocytogenes FSL N3-165] gi|258606046|gb|EEW18654.1| ribosomal protein L28 [Listeria monocytogenes FSL R2-503] gi|258609298|gb|EEW21906.1| ribosomal protein L28 [Listeria monocytogenes F6900] gi|284057824|gb|ADB68765.1| 50S ribosomal protein L28 [Listeria monocytogenes 08-5578] gi|284060871|gb|ADB71810.1| 50S ribosomal protein L28 [Listeria monocytogenes 08-5923] gi|289171403|emb|CBH27947.1| 50S ribosomal protein L28 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|290557414|gb|EFD90939.1| ribosomal protein L28 [Listeria monocytogenes FSL J2-071] gi|293584848|gb|EFF96880.1| ribosomal protein L28 [Listeria monocytogenes HPB2262] gi|293590356|gb|EFF98690.1| ribosomal protein L28 [Listeria monocytogenes J2818] gi|293595382|gb|EFG03143.1| rpmB [Listeria monocytogenes FSL J1-194] gi|300515607|gb|EFK42657.1| ribosomal protein L28 [Listeria monocytogenes FSL N1-017] gi|307571398|emb|CAR84577.1| ribosomal protein L28 [Listeria monocytogenes L99] gi|313608148|gb|EFR84200.1| ribosomal protein L28 [Listeria monocytogenes FSL F2-208] gi|313613546|gb|EFR87367.1| ribosomal protein L28 [Listeria marthii FSL S4-120] gi|313618300|gb|EFR90352.1| ribosomal protein L28 [Listeria innocua FSL S4-378] gi|313623271|gb|EFR93515.1| ribosomal protein L28 [Listeria innocua FSL J1-023] gi|313627916|gb|EFR96536.1| ribosomal protein L28 [Listeria ivanovii FSL F6-596] gi|313632764|gb|EFR99731.1| ribosomal protein L28 [Listeria seeligeri FSL N1-067] gi|313637346|gb|EFS02830.1| ribosomal protein L28 [Listeria seeligeri FSL S4-171] gi|328466170|gb|EGF37327.1| 50S ribosomal protein L28 [Listeria monocytogenes 1816] gi|328473543|gb|EGF44380.1| 50S ribosomal protein L28 [Listeria monocytogenes 220] gi|332312257|gb|EGJ25352.1| 50S ribosomal protein L28 [Listeria monocytogenes str. Scott A] Length = 62 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T + SGNK SHA N ++R + NL ++ ++ + + ++ +S AL+S Sbjct: 1 MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVN--GKPKKVWVSARALKS 56 >gi|227893316|ref|ZP_04011121.1| ribosomal protein L28 [Lactobacillus ultunensis DSM 16047] gi|315038626|ref|YP_004032194.1| 50S ribosomal protein L28 [Lactobacillus amylovorus GRL 1112] gi|325957107|ref|YP_004292519.1| 50S ribosomal protein L28 [Lactobacillus acidophilus 30SC] gi|227864896|gb|EEJ72317.1| ribosomal protein L28 [Lactobacillus ultunensis DSM 16047] gi|312276759|gb|ADQ59399.1| 50S ribosomal protein L28 [Lactobacillus amylovorus GRL 1112] gi|325333672|gb|ADZ07580.1| 50S ribosomal protein L28 [Lactobacillus acidophilus 30SC] gi|327183830|gb|AEA32277.1| 50S ribosomal protein L28 [Lactobacillus amylovorus GRL 1118] Length = 61 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GNK SH+ N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DYVTGKKTTFGNKRSHSMNSARRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|295109959|emb|CBL23912.1| LSU ribosomal protein L28P [Ruminococcus obeum A2-162] Length = 62 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + ++ + LRS Sbjct: 1 MAK-CAVCEKGAYFGNNVSHSHRRSNKMWKSNVKSVRVKTAAGGAQ-KMYVCTSCLRS 56 >gi|218133738|ref|ZP_03462542.1| hypothetical protein BACPEC_01607 [Bacteroides pectinophilus ATCC 43243] gi|217991113|gb|EEC57119.1| hypothetical protein BACPEC_01607 [Bacteroides pectinophilus ATCC 43243] Length = 61 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K V GN VSH++ ++ + + N+ + + ++ + ++ + LRS Sbjct: 1 MAK-CAICEKGVHFGNAVSHSHRRSNKMWKSNVKSVKVKTEGGAK--KMYVCTSCLRS 55 >gi|13508363|ref|NP_110313.1| 50S ribosomal protein L28 [Mycoplasma pneumoniae M129] gi|2500317|sp|P75171|RL28_MYCPN RecName: Full=50S ribosomal protein L28 gi|1673884|gb|AAB95866.1| ribosomal protein L28 [Mycoplasma pneumoniae M129] gi|301633195|gb|ADK86749.1| ribosomal protein L28 [Mycoplasma pneumoniae FH] Length = 65 Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +LT + + GN SH+ TRR++ NL + + + ++ +S LR+++ Sbjct: 1 MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKT-ADGKTTRILVSTRTLRTLK 59 Query: 61 RQ 62 + Sbjct: 60 KH 61 >gi|161507721|ref|YP_001577682.1| 50S ribosomal protein L28 [Lactobacillus helveticus DPC 4571] gi|260101413|ref|ZP_05751650.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|172048321|sp|A8YVV4|RL28_LACH4 RecName: Full=50S ribosomal protein L28 gi|160348710|gb|ABX27384.1| 50S ribosomal protein RL28 [Lactobacillus helveticus DPC 4571] gi|260084753|gb|EEW68873.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|328465644|gb|EGF36864.1| 50S ribosomal protein L28 [Lactobacillus helveticus MTCC 5463] Length = 61 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GNK SHA N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DYVTGKKTTFGNKRSHAMNSVRRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|254361401|ref|ZP_04977542.1| ribosomal protein L28 [Mannheimia haemolytica PHL213] gi|153092907|gb|EDN73938.1| ribosomal protein L28 [Mannheimia haemolytica PHL213] Length = 50 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 29 FLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 FLPNL + + LR++ +R ++++G +D L+ + Sbjct: 1 FLPNLHTHRFWVESENRFVTLRLTAKGMRIIDKKG-IDAVLAEIRAR 46 >gi|308801789|ref|XP_003078208.1| 50S ribosomal protein L28 (ISS) [Ostreococcus tauri] gi|116056659|emb|CAL52948.1| 50S ribosomal protein L28 (ISS) [Ostreococcus tauri] Length = 290 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 24/87 (27%) Query: 1 MS-RVCELTKKTVMSGNKVSHANNKTRRRFLPNLC--------------RITLISDIME- 44 MS R C LT K +G +S ++ + + NL + + Sbjct: 90 MSGRKCMLTGKKANNGRTISFSHIRNKTLQQVNLQVRTRGESDGSLGRVARDFRRERLTL 149 Query: 45 --------QKYQLRISKCALRSVERQG 63 + +LRIS A++++ + G Sbjct: 150 TTCFRTIARYVRLRISTNAIKTLNKLG 176 >gi|255023380|ref|ZP_05295366.1| 50S ribosomal protein L28 [Listeria monocytogenes FSL J1-208] Length = 61 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T + SGNK SHA N ++R + NL ++ ++ + + ++ +S AL+S Sbjct: 1 MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVN--GKPKKVWVSARALKS 56 >gi|216264626|ref|ZP_03436618.1| ribosomal protein L28 [Borrelia burgdorferi 156a] gi|215981099|gb|EEC21906.1| ribosomal protein L28 [Borrelia burgdorferi 156a] Length = 80 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 14/73 (19%) Query: 13 MSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 M GN V H KT+R F NL + + +R+S ALRS+ Sbjct: 1 MFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVSIRVSANALRSI 60 Query: 60 ERQGGLDRFLSNS 72 + G LD FL + Sbjct: 61 SKIG-LDAFLKKN 72 >gi|325971540|ref|YP_004247731.1| 50S ribosomal protein L28 [Spirochaeta sp. Buddy] gi|324026778|gb|ADY13537.1| 50S ribosomal protein L28 [Spirochaeta sp. Buddy] Length = 76 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R CE+ K ++GN V H T+R F PNL I + + + Sbjct: 1 MARRCEICGKGTVAGNSVPRKGQAKKHGGVGQHIGVTTKRVFRPNLVTIKTLINGTPRTI 60 Query: 48 QLRISKCALRS 58 +I LRS Sbjct: 61 --KICTRCLRS 69 >gi|323466293|gb|ADX69980.1| 50S ribosomal protein L28 [Lactobacillus helveticus H10] Length = 61 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GNK SHA N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DYVTGKKTTFGNKRSHAMNSARRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|239623782|ref|ZP_04666813.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521813|gb|EEQ61679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 68 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GNKVSH++ ++ + + N+ + + + ++ + LRS Sbjct: 8 MAK-CVICEKAAHFGNKVSHSHRRSNKMWKANVKSVKVKVN--GGTQRMYVCTSCLRS 62 >gi|239826574|ref|YP_002949198.1| 50S ribosomal protein L28 [Geobacillus sp. WCH70] gi|259646740|sp|C5D8S5|RL28_GEOSW RecName: Full=50S ribosomal protein L28 gi|239806867|gb|ACS23932.1| ribosomal protein L28 [Geobacillus sp. WCH70] Length = 61 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T K GN SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-CFVTGKKKSFGNSRSHAMNANKRTWKVNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|309386056|gb|ADO66946.1| 50S ribosomal protein L28 [Enterococcus faecium] Length = 64 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKY 47 M++VC T + SGN SHA N T+R PNL ++ ++ D +K+ Sbjct: 12 MAKVCYFTGRKTKSGNNRSHAMNSTKRTVKPNLQKVRVMVDGKPKKF 58 >gi|313904077|ref|ZP_07837457.1| ribosomal protein L28 [Eubacterium cellulosolvens 6] gi|313471226|gb|EFR66548.1| ribosomal protein L28 [Eubacterium cellulosolvens 6] Length = 62 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K V GN VSH++ ++ + N+ + + + ++ + LRS Sbjct: 1 MAK-CAICEKAVWFGNNVSHSHRRSNHMWKANVKSVRVKT-SEGGSKKMYVCTNCLRS 56 >gi|291563514|emb|CBL42330.1| LSU ribosomal protein L28P [butyrate-producing bacterium SS3/4] Length = 61 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + ++ + LRS Sbjct: 1 MAK-CAICEKAAHFGNGVSHSHRRSNKIWNANVKSVKVKVNGGSR--KMYVCTSCLRS 55 >gi|315651956|ref|ZP_07904958.1| 50S ribosomal protein L28 [Eubacterium saburreum DSM 3986] gi|315485785|gb|EFU76165.1| 50S ribosomal protein L28 [Eubacterium saburreum DSM 3986] Length = 61 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + ++ ++ + LRS Sbjct: 1 MAK-CSICEKAAHFGNAVSHSHRRSNKIWKANVKSVRVKTE--GGSKKMYVCTSCLRS 55 >gi|54020115|ref|YP_115772.1| 50S ribosomal protein L28 [Mycoplasma hyopneumoniae 232] gi|67461351|sp|Q601E3|RL28_MYCH2 RecName: Full=50S ribosomal protein L28 gi|53987288|gb|AAV27489.1| 50s ribosomal protein L28 [Mycoplasma hyopneumoniae 232] Length = 64 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M+R +++ + +SGN SHA N T+R+F NL +ITL + +K +L++S + + Sbjct: 1 MARKDQISHRGPLSGNNRSHALNATKRKFNLNLQQITLKT-ASGKKIRLKVSAKTKKILR 59 Query: 61 RQG 63 + G Sbjct: 60 KWG 62 >gi|284032698|ref|YP_003382629.1| 50S ribosomal protein L28 [Kribbella flavida DSM 17836] gi|283811991|gb|ADB33830.1| ribosomal protein L28 [Kribbella flavida DSM 17836] Length = 73 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 11/66 (16%) Query: 1 MSRVCELTKKTVMSGNKVSHANN---------KTRRRFLPNLCRITLISDIMEQKYQLRI 51 MS+ C++ K GN V+ +T RRF PN+ I I I ++++ Sbjct: 1 MSKKCDVCGKQPTFGNSVARLGKGAMIRRVKARTPRRFNPNIQPIRAI--IKGTPTKMKV 58 Query: 52 SKCALR 57 ++ Sbjct: 59 CTSCIK 64 >gi|196230859|ref|ZP_03129720.1| ribosomal protein L28 [Chthoniobacter flavus Ellin428] gi|196225200|gb|EDY19709.1| ribosomal protein L28 [Chthoniobacter flavus Ellin428] Length = 87 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+VC +T + G+K+ H R F PNL + + +++ Sbjct: 1 MSKVCSITNARPVKGSKIHRRGLAKKKGGIGQHVTKAVSRTFTPNLKKKRIWVSELKRFV 60 Query: 48 QLRISKCALRSVERQG 63 +++S AL++V + G Sbjct: 61 TVKLSTRALKTVTKNG 76 >gi|302339263|ref|YP_003804469.1| ribosomal protein L28 [Spirochaeta smaragdinae DSM 11293] gi|301636448|gb|ADK81875.1| ribosomal protein L28 [Spirochaeta smaragdinae DSM 11293] Length = 75 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSR CE+ K ++G+ V H +T+R F PNL ++ + QK Sbjct: 1 MSRRCEICGKGTVAGHSVPRKGQPKKQGGAGQHIGVRTKRVFKPNLVKVKALVG--NQKK 58 Query: 48 QLRISKCALRS 58 + + L+S Sbjct: 59 TITVCTRCLKS 69 >gi|15672174|ref|NP_266348.1| 50S ribosomal protein L28 [Lactococcus lactis subsp. lactis Il1403] gi|116511022|ref|YP_808238.1| 50S ribosomal protein L28 [Lactococcus lactis subsp. cremoris SK11] gi|125623081|ref|YP_001031564.1| 50S ribosomal protein L28 [Lactococcus lactis subsp. cremoris MG1363] gi|281490681|ref|YP_003352661.1| 50S ribosomal protein L28P [Lactococcus lactis subsp. lactis KF147] gi|14195117|sp|Q9CJ14|RL28_LACLA RecName: Full=50S ribosomal protein L28 gi|122940401|sp|Q032Q6|RL28_LACLS RecName: Full=50S ribosomal protein L28 gi|166226583|sp|A2RHS3|RL28_LACLM RecName: Full=50S ribosomal protein L28 gi|12723045|gb|AAK04290.1|AE006256_12 50S ribosomal protein L28 [Lactococcus lactis subsp. lactis Il1403] gi|116106676|gb|ABJ71816.1| LSU ribosomal protein L28P [Lactococcus lactis subsp. cremoris SK11] gi|124491889|emb|CAL96810.1| 50S ribosomal protein L28 [Lactococcus lactis subsp. cremoris MG1363] gi|281374450|gb|ADA63971.1| LSU ribosomal protein L28P [Lactococcus lactis subsp. lactis KF147] gi|300069829|gb|ADJ59229.1| 50S ribosomal protein L28 [Lactococcus lactis subsp. cremoris NZ9000] gi|326405768|gb|ADZ62839.1| 50S ribosomal protein L28P [Lactococcus lactis subsp. lactis CV56] Length = 64 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 MS+ C T + +S N SHA N+T+R PNL ++T++ + + S AL+ Sbjct: 1 MSKECYFTGRKTVSSNNRSHAMNQTKRVVKPNLQKVTIL--ENGELKTVWASAKALK 55 >gi|156085629|ref|XP_001610224.1| 50S ribosomal subunit protein L28 [Babesia bovis T2Bo] gi|154797476|gb|EDO06656.1| 50S ribosomal subunit protein L28, putative [Babesia bovis] Length = 176 Score = 50.0 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 SRVCELTKKT-VMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 +R C + K +SH+ K+ NL + +LRIS L++++ Sbjct: 68 ARRCMILGKMDNTKARNISHSGKKSHDPQRLNLQTKRIWCASKGYYVRLRISMRGLKTIK 127 Query: 61 RQG 63 R G Sbjct: 128 RLG 130 >gi|260437140|ref|ZP_05790956.1| ribosomal protein L28 [Butyrivibrio crossotus DSM 2876] gi|292810452|gb|EFF69657.1| ribosomal protein L28 [Butyrivibrio crossotus DSM 2876] Length = 62 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K G VSH++ ++ + + N+ + + Q ++ + LRS Sbjct: 1 MAK-CAICEKGAHFGIAVSHSHRRSNKMWKANVKSVKVKVGD-GQAKKMYVCTSCLRS 56 >gi|153810836|ref|ZP_01963504.1| hypothetical protein RUMOBE_01220 [Ruminococcus obeum ATCC 29174] gi|149833232|gb|EDM88314.1| hypothetical protein RUMOBE_01220 [Ruminococcus obeum ATCC 29174] Length = 84 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + ++ + LRS Sbjct: 23 MAK-CAVCEKGAYFGNNVSHSHRRSNKMWKSNVKSVRVKTAAGGAQ-KMYVCTSCLRS 78 >gi|295094783|emb|CBK83874.1| LSU ribosomal protein L28P [Coprococcus sp. ART55/1] Length = 61 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K G KVSH++ + + + N+ + + D + ++ + LRS Sbjct: 1 MAK-CSICDKGAHFGIKVSHSHRRANKMWKSNVKSVKAVVDGTPK--KIYVCTSCLRS 55 >gi|295399771|ref|ZP_06809752.1| ribosomal protein L28 [Geobacillus thermoglucosidasius C56-YS93] gi|312111718|ref|YP_003990034.1| ribosomal protein L28 [Geobacillus sp. Y4.1MC1] gi|294978174|gb|EFG53771.1| ribosomal protein L28 [Geobacillus thermoglucosidasius C56-YS93] gi|311216819|gb|ADP75423.1| ribosomal protein L28 [Geobacillus sp. Y4.1MC1] Length = 61 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T K GN SHA N +R + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-CFVTGKKKSFGNSRSHAMNANKRTWKANLHKVRILVD--GKPKRVWVSARALKS 55 >gi|81428311|ref|YP_395311.1| 50S ribosomal protein L28 [Lactobacillus sakei subsp. sakei 23K] gi|123564448|sp|Q38XS9|RL28_LACSS RecName: Full=50S ribosomal protein L28 gi|78609953|emb|CAI55000.1| 50S ribosomal protein L28 [Lactobacillus sakei subsp. sakei 23K] Length = 61 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T + GNK SHA N +RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 6 ITGRKTSFGNKRSHALNASRRSWKPNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|269926758|ref|YP_003323381.1| ribosomal protein L28 [Thermobaculum terrenum ATCC BAA-798] gi|269790418|gb|ACZ42559.1| ribosomal protein L28 [Thermobaculum terrenum ATCC BAA-798] Length = 73 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 11/70 (15%) Query: 1 MSRVCELTKKTVMSGNKVSHAN--------NKTRRRFLPNLCRITLISDIMEQKYQLRIS 52 M+R CE+ K G + + + KT R F PN+ R T++ + + ++ I Sbjct: 1 MAR-CEVCGKKTQFGRSIQYHHGGKWARRAQKTNRPFKPNVHRQTVMLN--GELVKIHIC 57 Query: 53 KCALRSVERQ 62 LR++ ++ Sbjct: 58 TRCLRTLAKK 67 >gi|12045286|ref|NP_073097.1| 50S ribosomal protein L28 [Mycoplasma genitalium G37] gi|255660070|ref|ZP_05405479.1| 50S ribosomal protein L28 [Mycoplasma genitalium G37] gi|1350704|sp|P47665|RL28_MYCGE RecName: Full=50S ribosomal protein L28 gi|3845019|gb|AAC72447.1| ribosomal protein L28 [Mycoplasma genitalium G37] gi|166078876|gb|ABY79494.1| ribosomal protein L28 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 64 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +LT + + GN SH+ TRR++ NL + D + ++ +S +R+++ Sbjct: 1 MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQSCKIK-DTNGKVTRILVSTKTIRTLK 59 Query: 61 R 61 + Sbjct: 60 K 60 >gi|18266837|sp|P23374|RL28_BACST RecName: Full=50S ribosomal protein L28 Length = 61 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C +T K GN SHA N +RR + NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-CFITGKKKSFGNTRSHAMNASRRDWKANLQKVRILVD--GKPKRVWVSARALKS 55 >gi|322493663|emb|CBZ28953.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 234 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 V + +V H + + P + SD ++ Q+ + + A+ +E+ GG D F+ Sbjct: 85 RVRTSRQVQHVYRQLK---YPFVKTGIHYSDTLDHWVQVPMVEAAMFEIEKDGGFDNFIL 141 Query: 71 NSKKENL-SARMRTLRSQILKKMSE 94 L S +R +L + E Sbjct: 142 KRSGPELRSTYGERIRRHLLVRQKE 166 >gi|224533780|ref|ZP_03674368.1| ribosomal protein L28 [Borrelia burgdorferi CA-11.2a] gi|224513073|gb|EEF83436.1| ribosomal protein L28 [Borrelia burgdorferi CA-11.2a] Length = 80 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 14/73 (19%) Query: 13 MSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 M GN V H KT+R F NL + + +R+S ALRS+ Sbjct: 1 MFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVSIRVSANALRSI 60 Query: 60 ERQGGLDRFLSNS 72 + G LD FL + Sbjct: 61 SKIG-LDTFLKKN 72 >gi|326790883|ref|YP_004308704.1| 50S ribosomal protein L28 [Clostridium lentocellum DSM 5427] gi|326541647|gb|ADZ83506.1| 50S ribosomal protein L28 [Clostridium lentocellum DSM 5427] Length = 61 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ CE+ K V G KVSH++ ++ + + N+ ++ + + + LRS Sbjct: 1 MAK-CEICSKDVHFGIKVSHSHRRSNKMWKSNVRKVR--VNQNGAVKTMNVCTRCLRS 55 >gi|240271|gb|AAB20568.1| BstL28=50S ribosomal subunit protein [Bacillus stearothermophilus, Peptide, 60 aa] gi|243176|gb|AAB21087.1| ribosomal protein L28 [Bacillus stearothermophilus, Peptide, 60 aa] gi|228173|prf||1718186A ribosomal protein L28 Length = 60 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 C +T K GN SHA N +RR + NL ++ ++ D + ++ +S AL+S Sbjct: 2 KCFITGKKKSFGNTRSHAMNASRRDWKANLQKVRILVD--GKPKRVWVSARALKS 54 >gi|72390455|ref|XP_845522.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62360335|gb|AAX80751.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802057|gb|AAZ11963.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261328926|emb|CBH11904.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 241 Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 31 PNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQIL 89 P + SD+++ Q+ + + A+ VE+ GG D F+ L S +R IL Sbjct: 102 PYVKTGIHYSDVLDHWVQVPMVEAAMFEVEKDGGFDNFILKRSGPELRSTYGERIRRHIL 161 Query: 90 KKMSE 94 + E Sbjct: 162 VRQKE 166 >gi|56419716|ref|YP_147034.1| 50S ribosomal protein L28 [Geobacillus kaustophilus HTA426] gi|261419379|ref|YP_003253061.1| 50S ribosomal protein L28 [Geobacillus sp. Y412MC61] gi|297530644|ref|YP_003671919.1| ribosomal protein L28 [Geobacillus sp. C56-T3] gi|319766194|ref|YP_004131695.1| ribosomal protein L28 [Geobacillus sp. Y412MC52] gi|67461273|sp|Q5L0R4|RL28_GEOKA RecName: Full=50S ribosomal protein L28 gi|56379558|dbj|BAD75466.1| 50S ribosomal protein L28 [Geobacillus kaustophilus HTA426] gi|261375836|gb|ACX78579.1| ribosomal protein L28 [Geobacillus sp. Y412MC61] gi|297253896|gb|ADI27342.1| ribosomal protein L28 [Geobacillus sp. C56-T3] gi|317111060|gb|ADU93552.1| ribosomal protein L28 [Geobacillus sp. Y412MC52] Length = 61 Score = 49.6 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 C +T K GN SHA N +RR + NL ++ ++ D + ++ +S AL+S Sbjct: 3 KCFITGKKKSFGNSRSHAMNASRRTWKANLQKVRILVD--GKPKRVWVSARALKS 55 >gi|163783074|ref|ZP_02178069.1| S-adenosylmethionine decarboxylase proenzyme [Hydrogenivirga sp. 128-5-R1-1] gi|159881754|gb|EDP75263.1| S-adenosylmethionine decarboxylase proenzyme [Hydrogenivirga sp. 128-5-R1-1] Length = 68 Score = 49.6 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 CE+ K VM G +V+ + + R F PN+ ++ + ++ + L+ Sbjct: 4 CEICGKRVMHGRRVTFSAERNPRLFKPNVQKVRVRLPD-GSVKRMYVCTKCLK 55 >gi|266623311|ref|ZP_06116246.1| ribosomal protein L28 [Clostridium hathewayi DSM 13479] gi|302386337|ref|YP_003822159.1| ribosomal protein L28 [Clostridium saccharolyticum WM1] gi|288864907|gb|EFC97205.1| ribosomal protein L28 [Clostridium hathewayi DSM 13479] gi|302196965|gb|ADL04536.1| ribosomal protein L28 [Clostridium saccharolyticum WM1] Length = 61 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + ++ + LRS Sbjct: 1 MAK-CAICEKAAHFGNAVSHSHRRSNKMWKANVKSVKVKVNGGAK--KMYVCTSCLRS 55 >gi|116490524|ref|YP_810068.1| 50S ribosomal protein L28P [Oenococcus oeni PSU-1] gi|118587512|ref|ZP_01544936.1| ribosomal protein L28 [Oenococcus oeni ATCC BAA-1163] gi|290889925|ref|ZP_06553012.1| hypothetical protein AWRIB429_0402 [Oenococcus oeni AWRIB429] gi|122277289|sp|Q04GL9|RL28_OENOB RecName: Full=50S ribosomal protein L28 gi|116091249|gb|ABJ56403.1| LSU ribosomal protein L28P [Oenococcus oeni PSU-1] gi|118431963|gb|EAV38705.1| ribosomal protein L28 [Oenococcus oeni ATCC BAA-1163] gi|290480535|gb|EFD89172.1| hypothetical protein AWRIB429_0402 [Oenococcus oeni AWRIB429] Length = 66 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N RR + PNL ++T+ + + + ++ LR+ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNANRRSWKPNLQKVTVKING-DAAKTVYLTARTLRAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KNGSIE 64 >gi|87307700|ref|ZP_01089843.1| ribosomal protein L28 [Blastopirellula marina DSM 3645] gi|87289314|gb|EAQ81205.1| ribosomal protein L28 [Blastopirellula marina DSM 3645] Length = 92 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 14/71 (19%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++ CE+ K GN+V+ TRR+F PNL + + + Sbjct: 1 MAKTCEICGKGPQVGNQVTLRGKAKYLGGVGTKITGITRRKFKPNLQIVKAVKPS-GEHK 59 Query: 48 QLRISKCALRS 58 +++ +RS Sbjct: 60 SMQVCTQCIRS 70 >gi|138894701|ref|YP_001125154.1| 50S ribosomal protein L28 [Geobacillus thermodenitrificans NG80-2] gi|196247679|ref|ZP_03146381.1| ribosomal protein L28 [Geobacillus sp. G11MC16] gi|166226575|sp|A4IM55|RL28_GEOTN RecName: Full=50S ribosomal protein L28 gi|134266214|gb|ABO66409.1| Ribosomal protein L28 [Geobacillus thermodenitrificans NG80-2] gi|196212463|gb|EDY07220.1| ribosomal protein L28 [Geobacillus sp. G11MC16] Length = 61 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 C +T K GN SHA N RR + NL ++ ++ D + ++ +S AL+S Sbjct: 3 KCFVTGKKKSFGNTRSHAMNANRRTWKANLQKVRILVD--GKPKRVWVSARALKS 55 >gi|157872690|ref|XP_001684879.1| hypothetical protein [Leishmania major strain Friedlin] gi|68127949|emb|CAJ06610.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 234 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 V + +V H + + P + SD ++ Q+ + + A+ +E+ GG D F+ Sbjct: 85 RVRTSRQVQHVYRQLK---YPFVKTGIHYSDTLDHWVQVPMVEAAMFEIEKDGGFDNFIL 141 Query: 71 NSKKENL-SARMRTLRSQILKKMSE 94 L S +R +L + E Sbjct: 142 KRSGPELRSTYGERIRRHLLVRQKE 166 >gi|253578694|ref|ZP_04855965.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849637|gb|EES77596.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 82 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + + + LRS Sbjct: 21 MAK-CAICEKAAHFGNNVSHSHRRSNKMWKSNVKSVKIKT-AEGGARKTYVCTSCLRS 76 >gi|28378323|ref|NP_785215.1| ribosomal protein L28 [Lactobacillus plantarum WCFS1] gi|254556531|ref|YP_003062948.1| ribosomal protein L28 [Lactobacillus plantarum JDM1] gi|300767260|ref|ZP_07077172.1| 50S ribosomal protein L28 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180474|ref|YP_003924602.1| ribosomal protein L28 [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258524|sp|Q88WK6|RL28_LACPL RecName: Full=50S ribosomal protein L28 gi|28271158|emb|CAD64063.1| ribosomal protein L28 [Lactobacillus plantarum WCFS1] gi|254045458|gb|ACT62251.1| ribosomal protein L28 [Lactobacillus plantarum JDM1] gi|300495079|gb|EFK30235.1| 50S ribosomal protein L28 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045965|gb|ADN98508.1| ribosomal protein L28 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 61 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T K GN SHA N +RR + NL ++ ++ D + ++ +S L+S Sbjct: 1 MAK-DYVTGKRTHFGNTRSHALNHSRRSWKANLQKVRILVD--GKPKKVWVSARTLKS 55 >gi|323486982|ref|ZP_08092296.1| hypothetical protein HMPREF9474_04047 [Clostridium symbiosum WAL-14163] gi|323399694|gb|EGA92078.1| hypothetical protein HMPREF9474_04047 [Clostridium symbiosum WAL-14163] Length = 61 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ ++ ++ + LRS Sbjct: 1 MAK-CAICEKAAHFGNAVSHSHRRSNKMWKANV--KSVKVKTNGGAQKMYVCTSCLRS 55 >gi|184155720|ref|YP_001844060.1| 50S ribosomal protein L28 [Lactobacillus fermentum IFO 3956] gi|226694953|sp|B2GD48|RL28_LACF3 RecName: Full=50S ribosomal protein L28 gi|183227064|dbj|BAG27580.1| 50S ribosomal protein L28 [Lactobacillus fermentum IFO 3956] Length = 62 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GNK SHA N +RR + PNL + T++ + + ++ +S L+S Sbjct: 6 ITGKRTQFGNKRSHALNSSRRSWKPNLQKATILVN--GKPKKVYVSARTLKS 55 >gi|162447125|ref|YP_001620257.1| 50S ribosomal protein L28 [Acholeplasma laidlawii PG-8A] gi|189042423|sp|A9NEV1|RL28_ACHLI RecName: Full=50S ribosomal protein L28 gi|161985232|gb|ABX80881.1| large subunit ribosomal protein L28 [Acholeplasma laidlawii PG-8A] Length = 62 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ C +T KT GNK SHA N +RR + NL + + D +++IS AL+ +E Sbjct: 1 MAK-CYVTGKTTSFGNKRSHALNASRRTWKANLQTVRIK-DENGNVKRVKISAKALKKLE 58 >gi|146094020|ref|XP_001467121.1| hypothetical protein [Leishmania infantum JPCM5] gi|134071485|emb|CAM70174.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322501217|emb|CBZ36296.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 234 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 V + +V H + + P + SD ++ Q+ + + A+ +E+ GG D F+ Sbjct: 85 RVRTSRQVQHVYRQLK---YPFVKTGIHYSDTLDHWVQVPMVEAAMFEIEKDGGFDNFIL 141 Query: 71 NSKKENL-SARMRTLRSQILKKMSE 94 L S +R +L + E Sbjct: 142 KRSGPELRSTYGERIRRHLLVRQKE 166 >gi|295693183|ref|YP_003601793.1| 50S ribosomal protein l28 [Lactobacillus crispatus ST1] gi|295031289|emb|CBL50768.1| 50S ribosomal protein L28 [Lactobacillus crispatus ST1] Length = 56 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKY 47 M++ +T K GNK SH+ N TRR + PNL ++ ++ D ++ Sbjct: 1 MAK-DYVTGKKTTFGNKRSHSLNSTRRAWKPNLQKVRILVDGKPKRV 46 >gi|297183766|gb|ADI19890.1| hypothetical protein [uncultured alpha proteobacterium EB000_46D07] Length = 60 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%) Query: 56 LRSVERQGGLDRFLSNSKKENLSARMRTLRSQI 88 +R+VE+ GGLD +L ++ L+ R L+ +I Sbjct: 1 MRTVEKHGGLDTYLLQARNAELAIEARALKREI 33 >gi|330719297|ref|ZP_08313897.1| 50S ribosomal protein L28 [Leuconostoc fallax KCTC 3537] Length = 66 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + ++ ++ L++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKING-GAPKKVYLTARTLKAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KNGSIE 64 >gi|326494558|dbj|BAJ94398.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 164 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 2 SRVCELTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRIS 52 ++ + + GNKVS NK+RR + PN+ L S I ++ +++++ Sbjct: 100 AKRGIFAGRHIQFGNKVSEDGGNKSRRNWKPNVQEKRLFSYIHDRHIRVKVT 151 >gi|330836397|ref|YP_004411038.1| 50S ribosomal protein L28P [Spirochaeta coccoides DSM 17374] gi|329748300|gb|AEC01656.1| LSU ribosomal protein L28P [Spirochaeta coccoides DSM 17374] Length = 76 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R C+LT K MSGN V+ H T+R F PNL ++ + D + Sbjct: 1 MARRCQLTGKGTMSGNIVTRKGQAKKKGGVGQHIGVCTKRTFKPNLVKVKTLID--GKPV 58 Query: 48 QLRISKCALRS 58 L+IS ALRS Sbjct: 59 TLKISVRALRS 69 >gi|225572206|ref|ZP_03781070.1| hypothetical protein RUMHYD_00500 [Blautia hydrogenotrophica DSM 10507] gi|225040378|gb|EEG50624.1| hypothetical protein RUMHYD_00500 [Blautia hydrogenotrophica DSM 10507] Length = 62 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + +K GN VSH++ ++ + + N+ + + + ++ + LRS Sbjct: 1 MAK-CAICEKAAHFGNNVSHSHRRSNKMWKSNVKSVKVKT-ANGAAKKMYVCTSCLRS 56 >gi|90961596|ref|YP_535512.1| 50S ribosomal protein L28 [Lactobacillus salivarius UCC118] gi|227890683|ref|ZP_04008488.1| 50S ribosomal protein L28 [Lactobacillus salivarius ATCC 11741] gi|301299257|ref|ZP_07205543.1| ribosomal protein L28 [Lactobacillus salivarius ACS-116-V-Col5a] gi|323340715|ref|ZP_08080967.1| 50S ribosomal protein L28 [Lactobacillus ruminis ATCC 25644] gi|122449147|sp|Q1WUA6|RL28_LACS1 RecName: Full=50S ribosomal protein L28 gi|90820790|gb|ABD99429.1| LSU ribosomal protein L28P [Lactobacillus salivarius UCC118] gi|227867621|gb|EEJ75042.1| 50S ribosomal protein L28 [Lactobacillus salivarius ATCC 11741] gi|300853101|gb|EFK80699.1| ribosomal protein L28 [Lactobacillus salivarius ACS-116-V-Col5a] gi|323091838|gb|EFZ34458.1| 50S ribosomal protein L28 [Lactobacillus ruminis ATCC 25644] Length = 61 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T + G K SHA N+T R + PNL ++ ++ D + ++ +S AL+S Sbjct: 6 VTGRKTTFGKKRSHALNQTNRSWKPNLQKVRILVD--GKPKKVWVSTRALKS 55 >gi|260663563|ref|ZP_05864453.1| 50S ribosomal protein L28 [Lactobacillus fermentum 28-3-CHN] gi|260552104|gb|EEX25157.1| 50S ribosomal protein L28 [Lactobacillus fermentum 28-3-CHN] Length = 62 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 +T K GNK SHA N +RR + PNL + T++ + + ++ +S L+ Sbjct: 6 ITGKRTQFGNKRSHALNSSRRSWKPNLQKATILVN--GKPKKVYVSARTLK 54 >gi|325130940|gb|EGC53668.1| ribosomal protein L28 [Neisseria meningitidis OX99.30304] Length = 32 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 21/31 (67%), Positives = 22/31 (70%) Query: 8 TKKTVMSGNKVSHANNKTRRRFLPNLCRITL 38 T K MSGN VSHANNKT+RRFLPNL Sbjct: 2 TGKRPMSGNNVSHANNKTKRRFLPNLQSRRF 32 >gi|238854787|ref|ZP_04645117.1| ribosomal protein L28 [Lactobacillus jensenii 269-3] gi|260664018|ref|ZP_05864871.1| ribosomal protein L28 [Lactobacillus jensenii SJ-7A-US] gi|282933865|ref|ZP_06339213.1| ribosomal protein L28 [Lactobacillus jensenii 208-1] gi|313472299|ref|ZP_07812791.1| ribosomal protein L28 [Lactobacillus jensenii 1153] gi|238832577|gb|EEQ24884.1| ribosomal protein L28 [Lactobacillus jensenii 269-3] gi|260561904|gb|EEX27873.1| ribosomal protein L28 [Lactobacillus jensenii SJ-7A-US] gi|281301954|gb|EFA94208.1| ribosomal protein L28 [Lactobacillus jensenii 208-1] gi|313449116|gb|EEQ68854.2| ribosomal protein L28 [Lactobacillus jensenii 1153] Length = 61 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GNK S A N TRR + PNL ++ ++ D + ++ +S AL+S Sbjct: 6 VTGKKTTFGNKRSKALNSTRRAWKPNLQKVRILVD--GKPKRVWVSTKALKS 55 >gi|104774265|ref|YP_619245.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514354|ref|YP_813260.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|313124082|ref|YP_004034341.1| 50S ribosomal protein l28 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|122274914|sp|Q049Q0|RL28_LACDB RecName: Full=50S ribosomal protein L28 gi|122397094|sp|Q1G9J5|RL28_LACDA RecName: Full=50S ribosomal protein L28 gi|103423346|emb|CAI98193.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093669|gb|ABJ58822.1| LSU ribosomal protein L28P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|312280645|gb|ADQ61364.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325126053|gb|ADY85383.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325685877|gb|EGD27943.1| 50S ribosomal protein L28 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 61 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GN SHA N + R + PNL ++ ++ + + ++ +S L+S Sbjct: 6 VTGKKTTFGNTRSHALNSSSRSWKPNLQKVRILVN--GKPKRVWVSTKTLKS 55 >gi|315930013|gb|EFV09156.1| ribosomal protein L28 [Campylobacter jejuni subsp. jejuni 305] Length = 52 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 M GN VSHANNKT+RRFLPNL + + + ++RI+ LR++++ Sbjct: 1 MVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLKK 48 >gi|2135609|pir||I38927 melanoma antigen p15 - human gi|836930|gb|AAC50181.1| melanoma antigen p15 [Homo sapiens] gi|1098270|prf||2115356A p15 protein Length = 128 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQ 44 >gi|26327555|dbj|BAC27521.1| unnamed protein product [Mus musculus] gi|26338189|dbj|BAC32780.1| unnamed protein product [Mus musculus] Length = 129 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L ++ G D ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQ 44 >gi|160892747|ref|ZP_02073537.1| hypothetical protein CLOL250_00278 [Clostridium sp. L2-50] gi|156865788|gb|EDO59219.1| hypothetical protein CLOL250_00278 [Clostridium sp. L2-50] Length = 61 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ C + K G KVSH++ + + + N+ + I D ++ + L+S Sbjct: 1 MAK-CSVCNKGAHFGIKVSHSHRRANKMWKSNVKSVKAIVD--GSPKKIYVCTSCLKS 55 >gi|60822911|gb|AAX36625.1| mitochondrial ribosomal protein L28 [synthetic construct] Length = 128 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 44 >gi|49456461|emb|CAG46551.1| MRPL28 [Homo sapiens] Length = 128 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 44 >gi|32880057|gb|AAP88859.1| mitochondrial ribosomal protein L28 [Homo sapiens] Length = 128 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQ 44 >gi|254467970|ref|ZP_05081376.1| conserved hypothetical protein [beta proteobacterium KB13] gi|207086780|gb|EDZ64063.1| conserved hypothetical protein [beta proteobacterium KB13] Length = 49 Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 30 LPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKE 75 +PNL + + L+I+ ALR++++ G +D ++ K E Sbjct: 1 MPNLQNKKFWVESENRWVSLKITNAALRTIDKLG-IDAVIAKMKAE 45 >gi|295425214|ref|ZP_06817917.1| 50S ribosomal protein L28 [Lactobacillus amylolyticus DSM 11664] gi|295064990|gb|EFG55895.1| 50S ribosomal protein L28 [Lactobacillus amylolyticus DSM 11664] Length = 61 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GNK SH+ RR + PNL R+ ++ D + ++ +S L+S Sbjct: 6 VTGKKTTFGNKRSHSKRSARRAWKPNLQRVRILVD--GKPKRVWVSTKTLKS 55 >gi|189219026|ref|YP_001939667.1| 50S ribosomal protein L28 [Methylacidiphilum infernorum V4] gi|226732835|sp|B3DUR6|RL28_METI4 RecName: Full=50S ribosomal protein L28 gi|189185884|gb|ACD83069.1| Ribosomal protein L28 [Methylacidiphilum infernorum V4] Length = 87 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 13/76 (17%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 M R+C + K G K+ H T R FLPNL + + +K Sbjct: 1 MPRICPILDKRPTRGRKIIRKGKAKKKGGIGLHTTGNTPRLFLPNLRNKKVYVPELAKKV 60 Query: 48 QLRISKCALRSVERQG 63 LRIS AL+++ ++G Sbjct: 61 SLRISARALKTLMKKG 76 >gi|327537790|gb|EGF24495.1| ribosomal protein L28 [Rhodopirellula baltica WH47] Length = 95 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 14/71 (19%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M+R CE K V GN++ TRR+F+PNL ++ + Sbjct: 6 MARQCEACGKKVQMGNRIETRGKAKYLGGVGTKITGCTRRKFVPNLQKVHVTLP-NGTNK 64 Query: 48 QLRISKCALRS 58 +R+ +RS Sbjct: 65 SMRVCTQCIRS 75 >gi|256851312|ref|ZP_05556701.1| ribosomal protein L28 [Lactobacillus jensenii 27-2-CHN] gi|260660736|ref|ZP_05861651.1| ribosomal protein L28 [Lactobacillus jensenii 115-3-CHN] gi|282933243|ref|ZP_06338630.1| ribosomal protein L28 [Lactobacillus jensenii 208-1] gi|297206182|ref|ZP_06923577.1| 50S ribosomal protein L28 [Lactobacillus jensenii JV-V16] gi|256616374|gb|EEU21562.1| ribosomal protein L28 [Lactobacillus jensenii 27-2-CHN] gi|260548458|gb|EEX24433.1| ribosomal protein L28 [Lactobacillus jensenii 115-3-CHN] gi|281302747|gb|EFA94962.1| ribosomal protein L28 [Lactobacillus jensenii 208-1] gi|297149308|gb|EFH29606.1| 50S ribosomal protein L28 [Lactobacillus jensenii JV-V16] Length = 61 Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K GNK S A N TRR + PNL ++ ++ D + ++ +S L+S Sbjct: 6 VTGKKTTFGNKRSKALNSTRRAWKPNLQKVRILVD--GKPKRVWVSTKTLKS 55 >gi|154341891|ref|XP_001566897.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064222|emb|CAM40420.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 234 Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Query: 11 TVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS 70 V + +V H + + P + SD+++ Q+ + + A+ +E+ GG D F+ Sbjct: 85 RVRTSRQVQHVYRQLK---YPFVKTGIHYSDMLDHWVQVPMVEAAMFEIEKDGGFDNFIL 141 Query: 71 NSKKENL-SARMRTLRSQILKKMSE 94 L S +R +L + E Sbjct: 142 RRSGPELRSTYGERIRRHLLVRQKE 166 >gi|148544389|ref|YP_001271759.1| 50S ribosomal protein L28 [Lactobacillus reuteri DSM 20016] gi|184153753|ref|YP_001842094.1| 50S ribosomal protein L28 [Lactobacillus reuteri JCM 1112] gi|194466499|ref|ZP_03072486.1| ribosomal protein L28 [Lactobacillus reuteri 100-23] gi|227363186|ref|ZP_03847320.1| ribosomal protein L28 [Lactobacillus reuteri MM2-3] gi|227544373|ref|ZP_03974422.1| ribosomal protein L28 [Lactobacillus reuteri CF48-3A] gi|300909766|ref|ZP_07127227.1| 50S ribosomal protein L28 [Lactobacillus reuteri SD2112] gi|325682709|ref|ZP_08162225.1| 50S ribosomal protein L28 [Lactobacillus reuteri MM4-1A] gi|166987913|sp|A5VKP8|RL28_LACRD RecName: Full=50S ribosomal protein L28 gi|226694954|sp|B2G832|RL28_LACRJ RecName: Full=50S ribosomal protein L28 gi|148531423|gb|ABQ83422.1| LSU ribosomal protein L28P [Lactobacillus reuteri DSM 20016] gi|183225097|dbj|BAG25614.1| 50S ribosomal protein L28 [Lactobacillus reuteri JCM 1112] gi|194453535|gb|EDX42432.1| ribosomal protein L28 [Lactobacillus reuteri 100-23] gi|227071792|gb|EEI10081.1| ribosomal protein L28 [Lactobacillus reuteri MM2-3] gi|227185636|gb|EEI65707.1| ribosomal protein L28 [Lactobacillus reuteri CF48-3A] gi|300893631|gb|EFK86990.1| 50S ribosomal protein L28 [Lactobacillus reuteri SD2112] gi|324977059|gb|EGC14010.1| 50S ribosomal protein L28 [Lactobacillus reuteri MM4-1A] Length = 61 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 + K GNK SHA N +RR + PNL ++T++ + + ++ +S L+S Sbjct: 6 INGKRTQFGNKRSHALNSSRRSWKPNLQKVTILVN--GKPKKVYVSARTLKS 55 >gi|259501522|ref|ZP_05744424.1| 50S ribosomal protein L28 [Lactobacillus iners DSM 13335] gi|315653365|ref|ZP_07906287.1| 50S ribosomal protein L28 [Lactobacillus iners ATCC 55195] gi|259167040|gb|EEW51535.1| 50S ribosomal protein L28 [Lactobacillus iners DSM 13335] gi|315489290|gb|EFU78930.1| 50S ribosomal protein L28 [Lactobacillus iners ATCC 55195] Length = 71 Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T GNK S A N RR + PNL ++ ++ D + ++ +S L+S Sbjct: 11 MAK-DIITGCKTTFGNKRSKALNAVRRSWKPNLQKVRILVD--GKPKRVWVSARTLKS 65 >gi|148657626|ref|YP_001277831.1| 50S ribosomal protein L28 [Roseiflexus sp. RS-1] gi|148569736|gb|ABQ91881.1| LSU ribosomal protein L28P [Roseiflexus sp. RS-1] Length = 68 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 11/67 (16%) Query: 1 MSRVCELTKKTVMSGNKVSHANN--------KTRRRFLPNLCRITLISDIMEQKYQLRIS 52 M++ C + K+V G + H + KT R F PN+ + T++ D +K Q+++ Sbjct: 1 MAK-CMVCNKSVSFGRNIRHKASGGWARRAPKTNRTFKPNVQKTTIMVD--GEKVQIKVC 57 Query: 53 KCALRSV 59 LR++ Sbjct: 58 TRCLRTM 64 >gi|197294749|ref|YP_001799290.1| 50S ribosomal protein L28 [Candidatus Phytoplasma australiense] gi|171854076|emb|CAM12049.1| 50S ribosomal protein L28 [Candidatus Phytoplasma australiense] Length = 61 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 C +T KT + GN+ SHA N T+R + NL + + + + +++I+ AL+ Sbjct: 2 KCYVTGKTTLFGNRRSHAMNATKRVWKSNLQSVRI-INEQGKVQKVKIAARALK 54 >gi|227510458|ref|ZP_03940507.1| ribosomal protein L28 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513467|ref|ZP_03943516.1| ribosomal protein L28 [Lactobacillus buchneri ATCC 11577] gi|227524610|ref|ZP_03954659.1| ribosomal protein L28 [Lactobacillus hilgardii ATCC 8290] gi|227083340|gb|EEI18652.1| ribosomal protein L28 [Lactobacillus buchneri ATCC 11577] gi|227088285|gb|EEI23597.1| ribosomal protein L28 [Lactobacillus hilgardii ATCC 8290] gi|227190110|gb|EEI70177.1| ribosomal protein L28 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 61 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 ++ K GNK SHA N +RR + PNL ++ ++ D + ++ IS L+S Sbjct: 6 ISGKRTHFGNKRSHALNSSRRSWKPNLQKVRILVD--GKPKKVWISARTLKS 55 >gi|116495100|ref|YP_806834.1| 50S ribosomal protein L28 [Lactobacillus casei ATCC 334] gi|191638605|ref|YP_001987771.1| 50S ribosomal protein L28 [Lactobacillus casei BL23] gi|227534885|ref|ZP_03964934.1| ribosomal protein L28 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631978|ref|ZP_04675009.1| ribosomal protein L28 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066663|ref|YP_003788686.1| 50S ribosomal protein L28 [Lactobacillus casei str. Zhang] gi|122263483|sp|Q038I0|RL28_LACC3 RecName: Full=50S ribosomal protein L28 gi|226694952|sp|B3WEW2|RL28_LACCB RecName: Full=50S ribosomal protein L28 gi|116105250|gb|ABJ70392.1| LSU ribosomal protein L28P [Lactobacillus casei ATCC 334] gi|190712907|emb|CAQ66913.1| 50S ribosomal protein L28 [Lactobacillus casei BL23] gi|227187641|gb|EEI67708.1| ribosomal protein L28 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526443|gb|EEQ65444.1| ribosomal protein L28 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439070|gb|ADK18836.1| Ribosomal protein L28 [Lactobacillus casei str. Zhang] gi|327382646|gb|AEA54122.1| 50S ribosomal protein L28 [Lactobacillus casei LC2W] gi|327385840|gb|AEA57314.1| 50S ribosomal protein L28 [Lactobacillus casei BD-II] Length = 61 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T + GNK SHA N +RR++ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DIITGRHTTFGNKRSHALNSSRRQWKANLHKVRILVD--GKPKRVWVSARALKS 55 >gi|227515688|ref|ZP_03945737.1| ribosomal protein L28 [Lactobacillus fermentum ATCC 14931] gi|227085936|gb|EEI21248.1| ribosomal protein L28 [Lactobacillus fermentum ATCC 14931] Length = 62 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 +T K GNK SHA N +RR + PNL + T++ + + ++ +S L+ Sbjct: 6 ITGKRTRFGNKRSHALNSSRRSWKPNLQKATILVN--GKPKKVYVSARTLK 54 >gi|199597144|ref|ZP_03210576.1| Ribosomal protein L28 [Lactobacillus rhamnosus HN001] gi|229552464|ref|ZP_04441189.1| ribosomal protein L28 [Lactobacillus rhamnosus LMS2-1] gi|258508658|ref|YP_003171409.1| 50S ribosomal protein L28 [Lactobacillus rhamnosus GG] gi|258539835|ref|YP_003174334.1| 50S ribosomal protein L28 [Lactobacillus rhamnosus Lc 705] gi|199591948|gb|EDZ00023.1| Ribosomal protein L28 [Lactobacillus rhamnosus HN001] gi|229314201|gb|EEN80174.1| ribosomal protein L28 [Lactobacillus rhamnosus LMS2-1] gi|257148585|emb|CAR87558.1| LSU/50S ribosomal protein L28P [Lactobacillus rhamnosus GG] gi|257151511|emb|CAR90483.1| LSU/50S ribosomal protein L28P [Lactobacillus rhamnosus Lc 705] gi|259649964|dbj|BAI42126.1| 50S ribosomal protein L28 [Lactobacillus rhamnosus GG] Length = 61 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T + GNK SHA N +RR++ NL ++ ++ D + ++ +S AL+S Sbjct: 1 MAK-DVITGRHTTFGNKRSHALNSSRRQWKANLHKVRILVD--GKPKRVWVSARALKS 55 >gi|307128561|ref|YP_003880591.1| 50S ribosomal subunit protein L28 [Candidatus Sulcia muelleri CARI] gi|306483023|gb|ADM89893.1| 50S ribosomal subunit protein L28 [Candidatus Sulcia muelleri CARI] Length = 73 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKC 54 MS+ CE+T K + GNKVSHANNK +R F N+ + + L+I+ Sbjct: 1 MSKYCEITVKKKIKGNKVSHANNKIKRFFNINISKKRFFIKKKNKWITLKITSA 54 >gi|70921526|ref|XP_734076.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56506474|emb|CAH81604.1| hypothetical protein PC000717.04.0 [Plasmodium chabaudi chabaudi] Length = 115 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%) Query: 17 KVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 + S + KT R N + + + ++ +LR+S L+++++ G Sbjct: 1 RFSKSGIKTHRIQRVNFVKRRIYFEEEDRFVKLRVSTRGLKTIKKYG 47 >gi|116618600|ref|YP_818971.1| 50S ribosomal protein L28P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431990|ref|ZP_03914010.1| ribosomal protein L28 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122271200|sp|Q03W24|RL28_LEUMM RecName: Full=50S ribosomal protein L28 gi|116097447|gb|ABJ62598.1| LSU ribosomal protein L28P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352275|gb|EEJ42481.1| ribosomal protein L28 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 66 Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + ++ ++ L++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGA-APKKVYLTARTLKAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KNGSIE 64 >gi|325295639|ref|YP_004282153.1| 50S ribosomal protein L28 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066087|gb|ADY74094.1| 50S ribosomal protein L28 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 62 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C + K+ + NKVSH++ T ++ PNL +I + + ++ ++ + L+ Sbjct: 1 MAK-CAICGKSTIFINKVSHSHRVTSKKQRPNLQKIKAVVNGEKK--RIWVCTKCLK 54 >gi|15605677|ref|NP_213052.1| ribosomal protein L28 [Aquifex aeolicus VF5] gi|6647741|sp|O66492|RL28_AQUAE RecName: Full=50S ribosomal protein L28 gi|2982832|gb|AAC06455.1| ribosomal protein L28 [Aquifex aeolicus VF5] Length = 69 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 ELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 E+ K + G +V+ + + RR F PN+ ++ ++ ++ + L+ Sbjct: 5 EICGKRPVVGRRVTLSGERNRRIFKPNVHKMRVMLPD-GTVKRMYVCTKCLK 55 >gi|326693789|ref|ZP_08230794.1| 50S ribosomal protein L28 [Leuconostoc argentinum KCTC 3773] Length = 66 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + K ++ ++ L++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAPAK-KVYLTARTLKAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KNGSIE 64 >gi|331701491|ref|YP_004398450.1| 50S ribosomal protein L28 [Lactobacillus buchneri NRRL B-30929] gi|329128834|gb|AEB73387.1| 50S ribosomal protein L28 [Lactobacillus buchneri NRRL B-30929] Length = 61 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 + K GNK SHA N +RR + PNL ++ ++ D + ++ IS L+S Sbjct: 6 INGKRTHFGNKRSHALNSSRRSWKPNLQKVRILVD--GKPKKVWISARTLKS 55 >gi|156740624|ref|YP_001430753.1| 50S ribosomal protein L28 [Roseiflexus castenholzii DSM 13941] gi|156231952|gb|ABU56735.1| ribosomal protein L28 [Roseiflexus castenholzii DSM 13941] Length = 68 Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 11/67 (16%) Query: 1 MSRVCELTKKTVMSGNKVSHANN--------KTRRRFLPNLCRITLISDIMEQKYQLRIS 52 M++ C + K+V G + H + KT R F PN+ + T++ D +K Q+++ Sbjct: 1 MAK-CMVCNKSVSFGRNIRHKASGGWARRAPKTNRTFKPNVQKTTIMVD--GEKVQIKVC 57 Query: 53 KCALRSV 59 LR++ Sbjct: 58 TQCLRTM 64 >gi|313232950|emb|CBY19495.1| unnamed protein product [Oikopleura dioica] Length = 461 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 11/96 (11%) Query: 7 LTKKTVMSGNKVSHANNK--------TRRRFLPNLC-RITLISDIMEQKYQLRISKCALR 57 + V+ G+ + + + P S ++ + Q ++ L Sbjct: 183 WGGEGVIRGHTF-RSRIREYPQGTPEYNVTWWPERRYNHKFTSLLLGEVIQTVTTETCLD 241 Query: 58 SVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 ++ GG D ++ + L S L+ Q+L + Sbjct: 242 QIDECGGFDEYILFTSPAKLMSDLGCRLKQQMLYTL 277 >gi|325973257|ref|YP_004250321.1| 50S ribosomal protein L28 [Mycoplasma suis str. Illinois] gi|325989692|ref|YP_004249391.1| 50S ribosomal protein L28 [Mycoplasma suis KI3806] gi|323574777|emb|CBZ40437.1| Ribosomal protein L28 [Mycoplasma suis] gi|323651859|gb|ADX97941.1| 50S ribosomal protein L28 [Mycoplasma suis str. Illinois] Length = 67 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 35/63 (55%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 R+ +T ++ +GN S A N T+R + N+ LI + +K++++ S +R+ ++ Sbjct: 4 RLDRVTGRSSKTGNNRSKAMNATKRAWNLNIQSFQLIDAVTGKKFRVKTSVKTVRTWKKN 63 Query: 63 GGL 65 G + Sbjct: 64 GKI 66 >gi|256847366|ref|ZP_05552812.1| ribosomal protein L28 [Lactobacillus coleohominis 101-4-CHN] gi|256716030|gb|EEU31005.1| ribosomal protein L28 [Lactobacillus coleohominis 101-4-CHN] Length = 62 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T K+ GNK SHA N TRR + PNL + T++ + + ++ +S L+S Sbjct: 6 ITGKSTKLGNKRSHALNSTRRSWKPNLQKATILVN--GKPKKVYVSARTLKS 55 >gi|239791891|dbj|BAH72353.1| ACYPI007188 [Acyrthosiphon pisum] Length = 139 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 50 RISKCALRSVERQGGLDRFLSNSKKENLSARM-RTLRSQILKKMSEK 95 +++ AL + + GLD +L + +L + ++ +L + +K Sbjct: 4 TVTEKALDLINKNYGLDHYLLKTAACDLRTTLSLKIKRHLLMALRDK 50 >gi|227530546|ref|ZP_03960595.1| ribosomal protein L28 [Lactobacillus vaginalis ATCC 49540] gi|259503537|ref|ZP_05746439.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|312870001|ref|ZP_07730140.1| ribosomal protein L28 [Lactobacillus oris PB013-T2-3] gi|227349552|gb|EEJ39843.1| ribosomal protein L28 [Lactobacillus vaginalis ATCC 49540] gi|259168615|gb|EEW53110.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|311094586|gb|EFQ52891.1| ribosomal protein L28 [Lactobacillus oris PB013-T2-3] Length = 61 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 + K GNK SHA N +RR + PNL ++T++ + + ++ +S L+S Sbjct: 6 INGKRTRFGNKRSHALNSSRRSWKPNLQKVTILVN--GKPKKVYVSARTLKS 55 >gi|300173584|ref|YP_003772750.1| 50S ribosomal protein L28 [Leuconostoc gasicomitatum LMG 18811] gi|299887963|emb|CBL91931.1| 50S ribosomal protein L28 [Leuconostoc gasicomitatum LMG 18811] Length = 66 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + K ++ +S L+S Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAPAK-KVYLSARTLKSGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KTGTIE 64 >gi|320104926|ref|YP_004180517.1| 50S ribosomal protein L28 [Isosphaera pallida ATCC 43644] gi|319752208|gb|ADV63968.1| ribosomal protein L28 [Isosphaera pallida ATCC 43644] Length = 106 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 14/70 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M RVC+++ K GN V+ +RR F PNL +I + Q Sbjct: 1 MPRVCQVSGKKTSFGNHVTTRGKAKYLGGVGIKTTGVSRRTFRPNLQKIRVWLP-NGQMR 59 Query: 48 QLRISKCALR 57 +R++ +R Sbjct: 60 TIRVATSVIR 69 >gi|116333596|ref|YP_795123.1| ribosomal protein L28 [Lactobacillus brevis ATCC 367] gi|122269717|sp|Q03RT0|RL28_LACBA RecName: Full=50S ribosomal protein L28 gi|116098943|gb|ABJ64092.1| LSU ribosomal protein L28P [Lactobacillus brevis ATCC 367] Length = 61 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 L K GNK SHA N +RR + PNL ++ ++ D + ++ IS L+S Sbjct: 6 LNGKRTHFGNKRSHALNSSRRAWKPNLQKVRILVD--GKPKKVWISARTLKS 55 >gi|255321506|ref|ZP_05362664.1| ribosomal protein L28 [Campylobacter showae RM3277] gi|255301362|gb|EET80621.1| ribosomal protein L28 [Campylobacter showae RM3277] Length = 51 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 13 MSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER 61 M GN VSHA N+T+RRFLPNL I + + +++++ LR++ + Sbjct: 1 MVGNNVSHAKNRTKRRFLPNLRTIRVTLED-GTTRKIKVAASTLRTMRK 48 >gi|282889859|ref|ZP_06298398.1| hypothetical protein pah_c004o278 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500433|gb|EFB42713.1| hypothetical protein pah_c004o278 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 94 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 15/90 (16%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+VC +T K G K + KT+RRF NL L + Sbjct: 1 MSKVCPVTGKKTTRGFKYAIRGIAKKKKGIGLKVTGKTKRRFKANLADRKLWLAEENRFV 60 Query: 48 QL-RISKCALRSVERQ-GGLDRFLSNSKKE 75 + +S LR++E++ GG+ ++ + + Sbjct: 61 SIPNLSISGLRTLEKKEGGVAAYVRQVRSQ 90 >gi|254721389|ref|ZP_05183178.1| 50S ribosomal protein L28 [Bacillus anthracis str. A1055] Length = 60 Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 L + SGN SHA N T+R++ NL ++ + D + ++ +S AL+S Sbjct: 5 LLGRKARSGNSRSHAMNATKRKWGANLQKVRVRID--GKVQRVYVSARALKS 54 >gi|302023371|ref|ZP_07248582.1| 50S ribosomal protein L28 [Streptococcus suis 05HAS68] Length = 58 Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 7 LTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 T + +SGN SHA N+T+R PNL ++T++ D + ++ S AL+S Sbjct: 3 FTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLID--GKPKKVWASARALKS 52 >gi|302191505|ref|ZP_07267759.1| 50S ribosomal protein L28 [Lactobacillus iners AB-1] gi|309804314|ref|ZP_07698391.1| ribosomal protein L28 [Lactobacillus iners LactinV 11V1-d] gi|309805554|ref|ZP_07699599.1| ribosomal protein L28 [Lactobacillus iners LactinV 09V1-c] gi|309806869|ref|ZP_07700856.1| ribosomal protein L28 [Lactobacillus iners LactinV 03V1-b] gi|309808615|ref|ZP_07702507.1| ribosomal protein L28 [Lactobacillus iners LactinV 01V1-a] gi|309809547|ref|ZP_07703405.1| ribosomal protein L28 [Lactobacillus iners SPIN 2503V10-D] gi|312871456|ref|ZP_07731550.1| ribosomal protein L28 [Lactobacillus iners LEAF 3008A-a] gi|312872423|ref|ZP_07732492.1| ribosomal protein L28 [Lactobacillus iners LEAF 2062A-h1] gi|312874405|ref|ZP_07734435.1| ribosomal protein L28 [Lactobacillus iners LEAF 2052A-d] gi|312874566|ref|ZP_07734591.1| ribosomal protein L28 [Lactobacillus iners LEAF 2053A-b] gi|325911863|ref|ZP_08174267.1| ribosomal protein L28 [Lactobacillus iners UPII 143-D] gi|325913421|ref|ZP_08175787.1| ribosomal protein L28 [Lactobacillus iners UPII 60-B] gi|329921154|ref|ZP_08277676.1| ribosomal protein L28 [Lactobacillus iners SPIN 1401G] gi|308163717|gb|EFO65987.1| ribosomal protein L28 [Lactobacillus iners LactinV 11V1-d] gi|308165205|gb|EFO67443.1| ribosomal protein L28 [Lactobacillus iners LactinV 09V1-c] gi|308166735|gb|EFO68927.1| ribosomal protein L28 [Lactobacillus iners LactinV 03V1-b] gi|308168089|gb|EFO70215.1| ribosomal protein L28 [Lactobacillus iners LactinV 01V1-a] gi|308170219|gb|EFO72254.1| ribosomal protein L28 [Lactobacillus iners SPIN 2503V10-D] gi|311089957|gb|EFQ48376.1| ribosomal protein L28 [Lactobacillus iners LEAF 2053A-b] gi|311090017|gb|EFQ48431.1| ribosomal protein L28 [Lactobacillus iners LEAF 2052A-d] gi|311092005|gb|EFQ50380.1| ribosomal protein L28 [Lactobacillus iners LEAF 2062A-h1] gi|311092976|gb|EFQ51326.1| ribosomal protein L28 [Lactobacillus iners LEAF 3008A-a] gi|325476369|gb|EGC79531.1| ribosomal protein L28 [Lactobacillus iners UPII 143-D] gi|325477190|gb|EGC80336.1| ribosomal protein L28 [Lactobacillus iners UPII 60-B] gi|328934792|gb|EGG31283.1| ribosomal protein L28 [Lactobacillus iners SPIN 1401G] Length = 61 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M++ +T GNK S A N RR + PNL ++ ++ D + ++ +S L+S Sbjct: 1 MAK-DIITGCKTTFGNKRSKALNAVRRSWKPNLQKVRILVD--GKPKRVWVSARTLKS 55 >gi|30468056|ref|NP_848943.1| ribosomal protein L28 [Cyanidioschyzon merolae strain 10D] gi|68053208|sp|Q85G82|RK28_CYAME RecName: Full=50S ribosomal protein L28, chloroplastic gi|30409156|dbj|BAC76105.1| 50S ribosomal protein L28 [Cyanidioschyzon merolae strain 10D] Length = 75 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSRVC LT K +V++++ + RR NL + + I + L+IS A+++++ Sbjct: 1 MSRVCPLTLKKCNHAFRVTYSHKRNHRRQFVNLQKKRIF--INNEWVVLKISTKAIKTLK 58 Query: 61 RQ 62 + Sbjct: 59 SK 60 >gi|71406682|ref|XP_805859.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70869430|gb|EAN84008.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 313 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 31 PNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQIL 89 P + SD++ Q+ + + A+ VE+ GG D F+ L S +R IL Sbjct: 177 PYVKTGIHYSDVLCHWVQVPMVEAAMFEVEKDGGFDNFVLKRSGPELRSTYGERVRRHIL 236 Query: 90 KKMSE 94 + E Sbjct: 237 VRQKE 241 >gi|313220253|emb|CBY31111.1| unnamed protein product [Oikopleura dioica] Length = 578 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 11/96 (11%) Query: 7 LTKKTVMSGNKVSHANNK--------TRRRFLPNLC-RITLISDIMEQKYQLRISKCALR 57 + V+ G+ + + + P S ++ + Q ++ L Sbjct: 300 WGGEGVIRGHTF-RSRIREYPQGTPEYNVTWWPERRYNHKFTSLLLGEVIQTVTTETCLD 358 Query: 58 SVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 ++ GG D ++ + L S L+ Q+L + Sbjct: 359 QIDECGGFDEYILFTSPAKLMSDLGCRLKQQMLYTL 394 >gi|319790687|ref|YP_004152320.1| ribosomal protein L28 [Thermovibrio ammonificans HB-1] gi|317115189|gb|ADU97679.1| ribosomal protein L28 [Thermovibrio ammonificans HB-1] Length = 62 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M++ C + KT + NKVSH++ T ++ NL R+ I + ++ ++ + L+ Sbjct: 1 MAK-CAICGKTTIFVNKVSHSHRVTSKKQRANLQRVKAIVNGEKK--RIWVCTKCLK 54 >gi|170016876|ref|YP_001727795.1| ribosomal protein L28 [Leuconostoc citreum KM20] gi|259646743|sp|B1MXU9|RL28_LEUCK RecName: Full=50S ribosomal protein L28 gi|169803733|gb|ACA82351.1| Ribosomal protein L28 [Leuconostoc citreum KM20] Length = 66 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + K ++ ++ L++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAAAK-KVYLTARTLKAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KNGSIE 64 >gi|42519405|ref|NP_965335.1| 50S ribosomal protein L28 [Lactobacillus johnsonii NCC 533] gi|227890270|ref|ZP_04008075.1| 50S ribosomal protein L28 [Lactobacillus johnsonii ATCC 33200] gi|268319218|ref|YP_003292874.1| ribosomal protein L28 [Lactobacillus johnsonii FI9785] gi|67461480|sp|Q74IN6|RL28_LACJO RecName: Full=50S ribosomal protein L28 gi|41583693|gb|AAS09301.1| 50S ribosomal protein L28 [Lactobacillus johnsonii NCC 533] gi|227849084|gb|EEJ59170.1| 50S ribosomal protein L28 [Lactobacillus johnsonii ATCC 33200] gi|262397593|emb|CAX66607.1| ribosomal protein L28 [Lactobacillus johnsonii FI9785] gi|329667070|gb|AEB93018.1| 50S ribosomal protein L28 [Lactobacillus johnsonii DPC 6026] Length = 61 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T + + GNK S A N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 3 KDIITGRKTVFGNKRSKALNSVRRSWKPNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|116629425|ref|YP_814597.1| 50S ribosomal protein L28 [Lactobacillus gasseri ATCC 33323] gi|238852574|ref|ZP_04642984.1| ribosomal protein L28 [Lactobacillus gasseri 202-4] gi|282850868|ref|ZP_06260242.1| ribosomal protein L28 [Lactobacillus gasseri 224-1] gi|300361945|ref|ZP_07058122.1| 50S ribosomal protein L28 [Lactobacillus gasseri JV-V03] gi|311110926|ref|ZP_07712323.1| ribosomal protein L28 [Lactobacillus gasseri MV-22] gi|122273637|sp|Q044G3|RL28_LACGA RecName: Full=50S ribosomal protein L28 gi|116095007|gb|ABJ60159.1| LSU ribosomal protein L28P [Lactobacillus gasseri ATCC 33323] gi|238834720|gb|EEQ26947.1| ribosomal protein L28 [Lactobacillus gasseri 202-4] gi|282557820|gb|EFB63408.1| ribosomal protein L28 [Lactobacillus gasseri 224-1] gi|300354564|gb|EFJ70435.1| 50S ribosomal protein L28 [Lactobacillus gasseri JV-V03] gi|311066080|gb|EFQ46420.1| ribosomal protein L28 [Lactobacillus gasseri MV-22] Length = 61 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 +T + + GNK S A N RR + PNL ++ ++ D + ++ +S AL+S Sbjct: 3 KDIITGRKTVFGNKRSKALNSVRRSWKPNLQKVRILVD--GKPKRVWVSARALKS 55 >gi|294952911|ref|XP_002787511.1| hypothetical protein Pmar_PMAR015866 [Perkinsus marinus ATCC 50983] gi|239902513|gb|EER19307.1| hypothetical protein Pmar_PMAR015866 [Perkinsus marinus ATCC 50983] Length = 579 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 26 RRRFLPNLCRITLISDIMEQKYQ-LRISKCALRSVERQGGLDRFLSNSKKENLSARMRTL 84 R+ P R SD + Q LR++ AL ++E +GG D ++ S E + + Sbjct: 450 RKVLKPFTTRRDFRSDNLNQTIHNLRVTNSALYAIEDKGGFDEYIMRSPPEEMRSNTGEK 509 Query: 85 RSQIL 89 Q++ Sbjct: 510 MRQVM 514 >gi|332638223|ref|ZP_08417086.1| 50S ribosomal protein L28 [Weissella cibaria KACC 11862] Length = 66 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 V + K GN+ SHA N +RR + PNL ++T+ + ++ +S L++ + G Sbjct: 3 VDAVNGKRTRFGNQRSHALNSSRRSWKPNLQKVTVKINGS-APKKVYLSARTLKAGLKNG 61 Query: 64 GLD 66 ++ Sbjct: 62 SIE 64 >gi|288817536|ref|YP_003431883.1| ribosomal protein L28 [Hydrogenobacter thermophilus TK-6] gi|288786935|dbj|BAI68682.1| ribosomal protein L28 [Hydrogenobacter thermophilus TK-6] gi|308751139|gb|ADO44622.1| ribosomal protein L28 [Hydrogenobacter thermophilus TK-6] Length = 66 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C + KT G V+ + + R F PNL ++ + + ++ + L+ Sbjct: 1 MAR-CYVCGKTTKFGKSVTFSAERNSRTFKPNLHKMRVRLN-NGTVKRVYVCAKCLK 55 >gi|296110615|ref|YP_003620996.1| ribosomal protein L28 [Leuconostoc kimchii IMSNU 11154] gi|295832146|gb|ADG40027.1| ribosomal protein L28 [Leuconostoc kimchii IMSNU 11154] Length = 66 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 M++ +T GN+ SHA N +RR + PNL ++T+ + K ++ +S L++ Sbjct: 1 MAK-DAITGAHTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAPAK-KVYLSARTLKAGL 58 Query: 61 RQGGLD 66 + G ++ Sbjct: 59 KTGTIE 64 >gi|223940832|ref|ZP_03632663.1| ribosomal protein L28 [bacterium Ellin514] gi|223890509|gb|EEF57039.1| ribosomal protein L28 [bacterium Ellin514] Length = 88 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 15/70 (21%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R+CELT + G+ + +H T+RRF+PNL R+ + + + Sbjct: 1 MARICELTGTGPIKGSHIWRSGKAKKKGGIGTHVTAITKRRFMPNLQRVKAVINGEVRYI 60 Query: 48 QLRISKCALR 57 + ++ A++ Sbjct: 61 R--VTASAIK 68 >gi|220931851|ref|YP_002508759.1| ribosomal protein L28 [Halothermothrix orenii H 168] gi|254801364|sp|B8CWU5|RL28_HALOH RecName: Full=50S ribosomal protein L28 gi|219993161|gb|ACL69764.1| ribosomal protein L28 [Halothermothrix orenii H 168] Length = 76 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MSRVCE+ K + N+++ H +RRR PNL ++ I D + Sbjct: 1 MSRVCEICGKGTVKANRITRRGKAKKEGGVGKHITKTSRRRQKPNLVKVKAIVD--GRPK 58 Query: 48 QLRISKCALRS 58 ++++ L+S Sbjct: 59 RIKVCTKCLKS 69 >gi|315227141|ref|ZP_07868928.1| 50S ribosomal protein L28 [Parascardovia denticolens DSM 10105] gi|315119591|gb|EFT82724.1| 50S ribosomal protein L28 [Parascardovia denticolens DSM 10105] Length = 47 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 SH++ + +RRFLPNL + D + +LR+ L+ Sbjct: 2 SHSHLRNKRRFLPNLQAVRATVD--GETVRLRVCTSCLK 38 >gi|320333164|ref|YP_004169875.1| 50S ribosomal protein L28 [Deinococcus maricopensis DSM 21211] gi|319754453|gb|ADV66210.1| 50S ribosomal protein L28 [Deinococcus maricopensis DSM 21211] Length = 73 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++VCEL K + N V ++ R LPNL + + + Sbjct: 1 MAKVCELCGKGPIVVNSVIRRGKARAAGGVGRKTTGISKTRQLPNLQPVRIRKE--GAVL 58 Query: 48 QLRISKCALRS 58 +LR+ L+S Sbjct: 59 RLRVCTKCLKS 69 >gi|168702896|ref|ZP_02735173.1| hypothetical protein GobsU_25426 [Gemmata obscuriglobus UQM 2246] Length = 86 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++ C T K + GN+ + +RR+F PNL ++ + D + Sbjct: 1 MAKTCIFTGKKAVFGNRKKYRGKAKYLGGVGKKILGTSRRKFKPNLQKVLCVVD--GEAK 58 Query: 48 QLRISKCALRS 58 ++ +S A+RS Sbjct: 59 RVWVSASAIRS 69 >gi|257068998|ref|YP_003155253.1| 50S ribosomal protein L28P [Brachybacterium faecium DSM 4810] gi|256559816|gb|ACU85663.1| LSU ribosomal protein L28P [Brachybacterium faecium DSM 4810] Length = 65 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 + C++ K+ G VSH++ + RR+ PN+ + + I ++ + L+ Sbjct: 3 ASTCDICAKSPRFGKSVSHSHRRHSRRWNPNIQSVRTV--INGTSKRVNVCTSCLK 56 >gi|71402554|ref|XP_804179.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70867009|gb|EAN82328.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 223 Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 31 PNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQIL 89 P + SD++ Q+ + + A+ VER GG D F+ L S +R IL Sbjct: 134 PYVKTGIHYSDVLCHWVQVPMVEAAMFEVERDGGFDNFVLKRSGPELRSTYGERVRRHIL 193 Query: 90 KKMSE 94 + E Sbjct: 194 VRQKE 198 >gi|194246672|ref|YP_002004311.1| 50S ribosomal protein L28 [Candidatus Phytoplasma mali] gi|254801372|sp|B3QZS8|RL28_PHYMT RecName: Full=50S ribosomal protein L28 gi|193807029|emb|CAP18465.1| 50S ribosomal protein L28 [Candidatus Phytoplasma mali] Length = 62 Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 C +++K+ + GNK SH+ N +R + NL I + D + +++IS +L+ + + Sbjct: 3 RCYISQKSTLFGNKRSHSMNAIKRIWKTNLQSIRIE-DENGKIKKIKISARSLKKLNFK 60 >gi|149175392|ref|ZP_01854013.1| ribosomal protein L28 [Planctomyces maris DSM 8797] gi|148845660|gb|EDL60002.1| ribosomal protein L28 [Planctomyces maris DSM 8797] Length = 86 Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANN-------------KTRRRFLPNLCRITLISDIMEQKY 47 M + C+ KT + GN+V ++R F PNL + + Sbjct: 1 MGQKCDACGKTPVVGNRVRQRGKYKYLGGNGRQTTGVSKRVFRPNLQK--IRVQDGGSVV 58 Query: 48 QLRISKCALRS 58 R+ +RS Sbjct: 59 TQRVCTQCIRS 69 >gi|17104484|gb|AAL35406.1| melanoma antigen P15 [Gallus gallus] Length = 123 Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKMSEK 95 L +++ G D ++ + K ++ S L+ +L +++ + Sbjct: 2 RTLDLIDQAYGFDFYILKTPKADMCSKLGMDLKRTMLLRLARR 44 >gi|71402550|ref|XP_804177.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70867007|gb|EAN82326.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 270 Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 31 PNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQIL 89 P + SD++ Q+ + + A+ VER GG D F+ L S +R IL Sbjct: 134 PYVKTGIHYSDVLCHWVQVPMVEAAMFEVERDGGFDNFVLKRSGPELRSTYGERVRRHIL 193 Query: 90 KKMSE 94 + E Sbjct: 194 VRQKE 198 >gi|322823303|gb|EFZ29084.1| hypothetical protein TCSYLVIO_4670 [Trypanosoma cruzi] Length = 283 Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 31 PNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQIL 89 P + SD++ Q+ + + A+ VER GG D F+ L S +R IL Sbjct: 147 PYVKTGIHYSDVLCHWVQVPMVEAAMFEVERDGGFDNFVLKRSGPELRSTYGERVRRHIL 206 Query: 90 KKMSE 94 + E Sbjct: 207 VRQKE 211 >gi|14336693|gb|AAK61226.1|AE006463_6 melanoma-associated antigen recgonized by T lymphocytes ; P15 [Homo sapiens] Length = 131 Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 54 CALRSVERQGGLDRFLSN---SKKENL-SARMRTLRSQILKKMSEK 95 L ++ GLD ++ + KE+L S L+ +L +++ + Sbjct: 2 RTLDLIDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQ 47 >gi|195952451|ref|YP_002120741.1| ribosomal protein L28 [Hydrogenobaculum sp. Y04AAS1] gi|226694949|sp|B4U6J5|RL28_HYDS0 RecName: Full=50S ribosomal protein L28 gi|195932063|gb|ACG56763.1| ribosomal protein L28 [Hydrogenobaculum sp. Y04AAS1] Length = 63 Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 5 CELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 C + K + G V+ + + R F PNL + + ++ + L+ Sbjct: 4 CFVCNKKAVYGKSVTFSAERNSRVFKPNLQSVKIRMPD-GSTKRVMVCTKCLK 55 >gi|323717276|gb|EGB26483.1| 50S ribosomal protein L28 rpmB1 [Mycobacterium tuberculosis CDC1551A] Length = 77 Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 24/41 (58%) Query: 19 SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSV 59 SH++ +TRRR+ PN+ +++ ++R+S ++ + Sbjct: 2 SHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVI 42 >gi|254442487|ref|ZP_05055963.1| ribosomal protein L28 [Verrucomicrobiae bacterium DG1235] gi|198256795|gb|EDY81103.1| ribosomal protein L28 [Verrucomicrobiae bacterium DG1235] Length = 76 Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 14/70 (20%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R+C +T K +G+ + +H T+R+F PN+ R+ + Q Sbjct: 1 MARICAITGKRPTTGSIIHRKGQAKKSGGIGTHVTKTTKRKFRPNVQRVRVRL-ASGQIK 59 Query: 48 QLRISKCALR 57 ++ +S A++ Sbjct: 60 RIWVSAKAIK 69 >gi|302392179|ref|YP_003827999.1| 50S ribosomal protein L28P [Acetohalobium arabaticum DSM 5501] gi|302204256|gb|ADL12934.1| LSU ribosomal protein L28P [Acetohalobium arabaticum DSM 5501] Length = 76 Score = 41.9 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 15/70 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANN-------------KTRRRFLPNLCRITLISDIMEQKY 47 M++ CE+ K N V+ + +R PNL ++ + D Sbjct: 1 MAKHCEICGKGSNKANAVTRRGKAKKEGGVGRNVTQRAKRTQKPNLQKVKAMVD--GSPK 58 Query: 48 QLRISKCALR 57 ++ + L+ Sbjct: 59 RIHVCTKCLK 68 >gi|289547867|ref|YP_003472855.1| ribosomal protein L28 [Thermocrinis albus DSM 14484] gi|289181484|gb|ADC88728.1| ribosomal protein L28 [Thermocrinis albus DSM 14484] Length = 66 Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALR 57 M+R C + KT G V+ + + R+F NL RI + + ++ + ++ Sbjct: 1 MAR-CFVCGKTTKIGRSVTFSAERNPRKFKANLHRIRVRLED-GSVKRVYVCAKCIK 55 >gi|283781967|ref|YP_003372722.1| 50S ribosomal protein L28 [Pirellula staleyi DSM 6068] gi|283440420|gb|ADB18862.1| ribosomal protein L28 [Pirellula staleyi DSM 6068] Length = 92 Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 14/70 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M+ CE K GN+V TRR+F PNL + + + Sbjct: 1 MAYTCEFCDKRASRGNQVETRGKAKYLGGVGTKITGITRRQFKPNLQSVKITTP-NGTNT 59 Query: 48 QLRISKCALR 57 +RI L+ Sbjct: 60 TVRICTRCLK 69 >gi|309389032|gb|ADO76912.1| LSU ribosomal protein L28P [Halanaerobium praevalens DSM 2228] Length = 76 Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MSRVCE+ K N + T+R PNL ++ I D Sbjct: 1 MSRVCEICGKGGNKANSIQRRGKAKKKGGVGRNITSSTKRTQRPNLKKVKAIVD--GSPK 58 Query: 48 QLRISKCALRS 58 ++++ L+S Sbjct: 59 RIKVCTQCLKS 69 >gi|312143903|ref|YP_003995349.1| ribosomal protein L28 [Halanaerobium sp. 'sapolanicus'] gi|311904554|gb|ADQ14995.1| ribosomal protein L28 [Halanaerobium sp. 'sapolanicus'] Length = 76 Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 MSRVC++ K + + ++++R PNL ++ I D Sbjct: 1 MSRVCDICGKGGNKATSIQRRGKAKKKGGVGRNITSRSKRTQRPNLQKVKAIVD--GSPK 58 Query: 48 QLRISKCALRS 58 ++++ L+S Sbjct: 59 RIKVCTQCLKS 69 >gi|321309626|ref|YP_004191955.1| 50S ribosomal protein L28 [Mycoplasma haemofelis str. Langford 1] gi|319801470|emb|CBY92116.1| ribosomal protein L28 [Mycoplasma haemofelis str. Langford 1] Length = 65 Score = 41.2 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVE 60 MSR LT K +GN S A N ++ + N+ +TL D +K +L+ S +R+ Sbjct: 1 MSRKDRLTGKVARTGNSRSKALNIAKKAWHFNIQTVTLT-DKNGKKIKLKTSAKNIRTFR 59 Query: 61 RQGGL 65 ++G L Sbjct: 60 KKGLL 64 >gi|218295846|ref|ZP_03496626.1| ribosomal protein L28 [Thermus aquaticus Y51MC23] gi|218243584|gb|EED10112.1| ribosomal protein L28 [Thermus aquaticus Y51MC23] Length = 98 Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 22/104 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCEL+ K + N + ++RR PNL ++ + Q+ Sbjct: 1 MSKVCELSGKRPIVANSIERRGKAKREGGVGKKTTGISKRRQYPNLQKVRVQVA--GQEI 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILK 90 R++ + + L L ++ L + ++ ++LK Sbjct: 59 TFRVAAS---HIPKVYEL---LEKARGLKLEGLSAKEIKKELLK 96 >gi|241895661|ref|ZP_04782957.1| ribosomal protein L28 [Weissella paramesenteroides ATCC 33313] gi|241871028|gb|EER74779.1| ribosomal protein L28 [Weissella paramesenteroides ATCC 33313] Length = 66 Score = 40.8 bits (95), Expect = 0.066, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 4 VCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQG 63 V + K G + SHA N + R + PNL ++T+ + ++ +S L++ + G Sbjct: 3 VDAVNGKRTRFGKQRSHALNSSSRSWKPNLQKVTVKINGS-APKKVYLSARTLKAGLKNG 61 Query: 64 GLD 66 ++ Sbjct: 62 SIE 64 >gi|297622637|ref|YP_003704071.1| 50S ribosomal protein L28 [Truepera radiovictrix DSM 17093] gi|297163817|gb|ADI13528.1| ribosomal protein L28 [Truepera radiovictrix DSM 17093] Length = 75 Score = 40.8 bits (95), Expect = 0.066, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 15/70 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++VC++ K + N++ + T+ LPNL R+T S + Q Sbjct: 1 MAKVCDICGKKPVIRNQLVQSGKAKREGGVGRKTTGITKTWRLPNLQRVT--SHVGGQSR 58 Query: 48 QLRISKCALR 57 ++R +R Sbjct: 59 RIRACTACIR 68 >gi|293376129|ref|ZP_06622377.1| ribosomal protein L28 [Turicibacter sanguinis PC909] gi|325841640|ref|ZP_08167417.1| ribosomal protein L28 [Turicibacter sp. HGF1] gi|292645256|gb|EFF63318.1| ribosomal protein L28 [Turicibacter sanguinis PC909] gi|325489918|gb|EGC92266.1| ribosomal protein L28 [Turicibacter sp. HGF1] Length = 63 Score = 40.4 bits (94), Expect = 0.086, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRS 58 M+RVC +T + +GN SHA N ++R + N+ ++ ++ + + ++ +S AL+S Sbjct: 1 MARVCTITGRRTTTGNARSHAMNSSKRTWKSNVQKVKILVN--GKPKKVYVSARALKS 56 >gi|149197451|ref|ZP_01874502.1| ribosomal protein L28 [Lentisphaera araneosa HTCC2155] gi|149139469|gb|EDM27871.1| ribosomal protein L28 [Lentisphaera araneosa HTCC2155] Length = 74 Score = 40.4 bits (94), Expect = 0.086, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHAN-------------NKTRRRFLPNLCRITLISDIMEQKY 47 M++ C K G + H +R F PN+ ++ + Sbjct: 1 MAKECHFCGKKPHVGGTIVHRGISKKAGGIGLKLVKTNKRVFKPNIQKVKAKINGTACTV 60 Query: 48 QLRISKCALRS 58 +R+ Sbjct: 61 --NACTACIRT 69 >gi|91200830|emb|CAJ73884.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 89 Score = 40.4 bits (94), Expect = 0.088, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 14/69 (20%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 MSRVCE+ KK ++GN++ KT+R+F PN+ ++ + D + Sbjct: 13 MSRVCEICKKKTVAGNQIETRGLAKWKGGVGKKITGKTKRKFKPNIQKVKALID-NKTVK 71 Query: 48 QLRISKCAL 56 ++++ + Sbjct: 72 RIKVCTRCI 80 >gi|46200266|ref|YP_005933.1| 50S ribosomal protein L28 [Thermus thermophilus HB27] gi|81405186|sp|Q72G84|RL28_THET2 RecName: Full=50S ribosomal protein L28 gi|149240907|pdb|1VSA|V Chain V, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|160285449|pdb|1VSP|V Chain V, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156541|pdb|3D5B|1 Chain 1, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156595|pdb|3D5D|1 Chain 1, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766818|pdb|3F1F|1 Chain 1, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766874|pdb|3F1H|1 Chain 1, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|300508652|pdb|3MRZ|X Chain X, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508707|pdb|3MS1|X Chain X, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307567988|pdb|2XG0|1 Chain 1, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568046|pdb|2XG2|1 Chain 1, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|46197894|gb|AAS82306.1| LSU ribosomal protein L28P [Thermus thermophilus HB27] Length = 98 Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 20/103 (19%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCE++ K + N + ++RR PNL ++ + Q+ Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEI 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLRSQILK 90 R++ + + L + E LS + ++ ++LK Sbjct: 59 TFRVAAS---HIPKVYELVERAKGLRLEGLSPK--EIKKELLK 96 >gi|160881022|ref|YP_001559990.1| ribosomal protein L28 [Clostridium phytofermentans ISDg] gi|259646730|sp|A9KPH7|RL28_CLOPH RecName: Full=50S ribosomal protein L28 gi|160429688|gb|ABX43251.1| ribosomal protein L28 [Clostridium phytofermentans ISDg] Length = 65 Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 1 MSRVCELTKKTVMSGNKVSHANN----KTRRRFLPNLCRITLISDIMEQKYQLRISKCAL 56 M++ C + K G VSH+ + ++ + + N+ + + + ++ + L Sbjct: 1 MAK-CAICDKGAHFGKVVSHSRSQVSGRSNKMWKSNVKSVRIKVN--GGTQKMYVCTSCL 57 Query: 57 R 57 R Sbjct: 58 R 58 >gi|55980011|ref|YP_143308.1| 50S ribosomal protein L28 [Thermus thermophilus HB8] gi|62297604|sp|P60494|RL28_THET8 RecName: Full=50S ribosomal protein L28 gi|116668223|pdb|2J01|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668284|pdb|2J03|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|157836511|pdb|2V47|1 Chain 1, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836567|pdb|2V49|1 Chain 1, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|226887425|pdb|2WDI|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887457|pdb|2WDJ|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887514|pdb|2WDL|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887571|pdb|2WDN|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823555|pdb|2WH2|1 Chain 1, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823614|pdb|2WH4|1 Chain 1, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100033|pdb|3HUX|1 Chain 1, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100089|pdb|3HUZ|1 Chain 1, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824510|pdb|2WRJ|1 Chain 1, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824572|pdb|2WRL|1 Chain 1, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824635|pdb|2WRO|1 Chain 1, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824694|pdb|2WRR|1 Chain 1, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307215|pdb|3KIR|1 Chain 1, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307273|pdb|3KIT|1 Chain 1, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307331|pdb|3KIW|1 Chain 1, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307389|pdb|3KIY|1 Chain 1, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965652|pdb|3KNI|1 Chain 1, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965684|pdb|3KNK|1 Chain 1, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965716|pdb|3KNM|1 Chain 1, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965748|pdb|3KNO|1 Chain 1, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979496|pdb|3I8F|Z Chain Z, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979580|pdb|3I8I|Z Chain Z, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979634|pdb|3I9C|Z Chain Z, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979688|pdb|3I9E|Z Chain Z, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982101|pdb|2X9S|1 Chain 1, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982160|pdb|2X9U|1 Chain 1, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|309320278|pdb|3OH5|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320308|pdb|3OH7|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320380|pdb|3OHJ|1 Chain 1, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320410|pdb|3OHK|1 Chain 1, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320461|pdb|3OHZ|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320512|pdb|3OI1|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320563|pdb|3OI3|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320614|pdb|3OI5|1 Chain 1, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207700|pdb|2XQE|1 Chain 1, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754024|pdb|2XTG|1 Chain 1, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754082|pdb|2XUX|1 Chain 1, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533429|pdb|2Y0V|1 Chain 1, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533488|pdb|2Y0X|1 Chain 1, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533547|pdb|2Y0Z|1 Chain 1, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533606|pdb|2Y11|1 Chain 1, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533665|pdb|2Y13|1 Chain 1, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533724|pdb|2Y15|1 Chain 1, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533783|pdb|2Y17|1 Chain 1, Ef-Tu Complex 3 gi|325533842|pdb|2Y19|1 Chain 1, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|55771424|dbj|BAD69865.1| 50S ribosomal protein L28 [Thermus thermophilus HB8] Length = 98 Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 20/103 (19%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCE++ K + N + ++RR PNL ++ + Q+ Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEI 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLRSQILK 90 R++ + + L K E LS + ++ ++LK Sbjct: 59 TFRVAAS---HIPKVYELVERAKGLKLEGLSPK--EIKKELLK 96 >gi|297567389|ref|YP_003686361.1| 50S ribosomal protein L28 [Meiothermus silvanus DSM 9946] gi|296851838|gb|ADH64853.1| ribosomal protein L28 [Meiothermus silvanus DSM 9946] Length = 98 Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 24/105 (22%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MSR+CE++ K N V+ ++R PNL ++ + Q+ Sbjct: 1 MSRICEISGKRPTVVNSVTRRGKAKADGGVGKKTTGISKRWQYPNLQKVNITVA--GQEI 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLRSQILKKM 92 R++ + V + + + + T + QI K+ Sbjct: 59 TFRVATSYVHKV--------YELAERAKGMQLEGLTAK-QIKAKL 94 >gi|294054718|ref|YP_003548376.1| ribosomal protein L28 [Coraliomargarita akajimensis DSM 45221] gi|293614051|gb|ADE54206.1| ribosomal protein L28 [Coraliomargarita akajimensis DSM 45221] Length = 76 Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 14/70 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHAN-------------NKTRRRFLPNLCRITLISDIMEQKY 47 M+R+C +T K + G ++ T+RRF PN+ R+ + Q Sbjct: 1 MARICAITGKRPVKGGRIIRKGLTKKSGGIGTSLVKNTKRRFRPNVQRVRVKLPS-GQVK 59 Query: 48 QLRISKCALR 57 ++ +S A++ Sbjct: 60 RMWVSAKAIK 69 >gi|226354947|ref|YP_002784687.1| ribosomal protein L28 [Deinococcus deserti VCD115] gi|226316937|gb|ACO44933.1| putative Ribosomal protein L28 [Deinococcus deserti VCD115] Length = 73 Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 15/72 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++VCE+ K + N V ++R PNL L Sbjct: 1 MAKVCEVCGKGPIVVNSVIRRGKARAAGGVGRKVTGISKRSQKPNLQP--LTVTRGGVSL 58 Query: 48 QLRISKCALRSV 59 +LR+ +SV Sbjct: 59 RLRVCSKCRKSV 70 >gi|328949571|ref|YP_004366906.1| 50S ribosomal protein L28 [Marinithermus hydrothermalis DSM 14884] gi|328449895|gb|AEB10796.1| 50S ribosomal protein L28 [Marinithermus hydrothermalis DSM 14884] Length = 99 Score = 39.2 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 20/103 (19%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCE++ K + NK++ ++RR LPNL ++ I ++ Sbjct: 1 MSKVCEISGKRPVVANKITRRGKAKREGGVGKKITGISKRRQLPNLQKVR--VKIGDRTL 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLRSQILK 90 R+S + + L LS + L++++L+ Sbjct: 59 TFRVSAS---HIHKVYELAERAKGMDTRGLSDK--KLKARLLQ 96 >gi|94986349|ref|YP_605713.1| ribosomal protein L28 [Deinococcus geothermalis DSM 11300] gi|94556630|gb|ABF46544.1| LSU ribosomal protein L28P [Deinococcus geothermalis DSM 11300] Length = 71 Score = 39.2 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 15/72 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M++VCE+ K + N V T+R PNL L Sbjct: 1 MAKVCEVCGKGPIVVNSVIRRGKARREGGVGRKTTGITKRVQKPNLQP--LTVVRGGVAV 58 Query: 48 QLRISKCALRSV 59 Q+R+ +S+ Sbjct: 59 QMRVCNKCRKSL 70 >gi|296122526|ref|YP_003630304.1| ribosomal protein L28 [Planctomyces limnophilus DSM 3776] gi|296014866|gb|ADG68105.1| ribosomal protein L28 [Planctomyces limnophilus DSM 3776] Length = 86 Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 M C+L K+V GN + +RR F PNL + + + Sbjct: 1 MGAQCDLCNKSVTFGNTLQQRGKAKYLGGNGRKTTGISRRVFRPNLQSVNVQVGE--RSQ 58 Query: 48 QLRISKCALRS 58 ++ + +RS Sbjct: 59 KMMVCVKCIRS 69 >gi|211938845|pdb|2JL6|1 Chain 1, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938903|pdb|2JL8|1 Chain 1, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit Length = 89 Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 15/67 (22%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCE++ K + N + ++RR PNL ++ + Q+ Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEI 58 Query: 48 QLRISKC 54 R++ Sbjct: 59 TFRVAAS 65 >gi|325282364|ref|YP_004254905.1| 50S ribosomal protein L28 [Deinococcus proteolyticus MRP] gi|324314173|gb|ADY25288.1| 50S ribosomal protein L28 [Deinococcus proteolyticus MRP] Length = 81 Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 15/74 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MSRVC LT K M N V T+R PNL + T++ + Sbjct: 1 MSRVCYLTGKKNMVVNSVVRRGKARAAGGVGRKTTGITKRVQKPNLQKKTILEGGEAR-- 58 Query: 48 QLRISKCALRSVER 61 Q+ +S A+R + R Sbjct: 59 QVWLSAKAIRMLNR 72 >gi|221109036|ref|XP_002169932.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 161 Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 54 CALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILKKM 92 A+R+++ GG D ++ + L S L+ ++ Sbjct: 2 KAVRAIDYAGGFDNYILRTPDNVLVSNAAIALKRKMETVQ 41 >gi|320451499|ref|YP_004203595.1| 50S ribosomal protein L28 [Thermus scotoductus SA-01] gi|320151668|gb|ADW23046.1| 50S ribosomal protein L28 [Thermus scotoductus SA-01] Length = 98 Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 22/104 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS+VCE++ K + N + ++RR PNL +I + Q+ Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKIRVQVA--GQEI 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENL-SARMRTLRSQILK 90 R++ + + L L +K L + ++ ++LK Sbjct: 59 TFRVAAS---HIPKVYEL---LDRAKGLKLEGLSAKEIKERLLK 96 >gi|182415594|ref|YP_001820660.1| ribosomal protein L28 [Opitutus terrae PB90-1] gi|226732843|sp|B1ZYG2|RL28_OPITP RecName: Full=50S ribosomal protein L28 gi|177842808|gb|ACB77060.1| ribosomal protein L28 [Opitutus terrae PB90-1] Length = 76 Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 14/70 (20%) Query: 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKY 47 M+R+C +T + + G+ + +H T+R+F PNL RI + Sbjct: 1 MARICAITGRRPVKGSIINRKGQSKKSGGIGTHVTTITKRKFRPNLQRIRVKLP-NGGTK 59 Query: 48 QLRISKCALR 57 ++ +S AL+ Sbjct: 60 RMLVSVKALK 69 >gi|297171398|gb|ADI22401.1| hypothetical protein [uncultured Planctomycetales bacterium HF0500_02G17] Length = 95 Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 16/73 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIME--- 44 M C T K G + ++ + TRR F PN+ + + + + Sbjct: 1 MPYECFYTGKKTTFGKQRTYRGQRISKGGFGLKTTGITRRTFKPNIQNVNAVVENPDGST 60 Query: 45 QKYQLRISKCALR 57 Q +++ S A+R Sbjct: 61 QVKRIKASAKAIR 73 >gi|281357936|ref|ZP_06244421.1| ribosomal protein L28 [Victivallis vadensis ATCC BAA-548] gi|281315594|gb|EFA99622.1| ribosomal protein L28 [Victivallis vadensis ATCC BAA-548] Length = 75 Score = 37.3 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 15/71 (21%) Query: 1 MSRVCELTKKTVMSGNKVS-------------HANNKTRRRFLPNLCRITLISDIMEQKY 47 MS+ CE+ K G ++ H +R F NL + + + Sbjct: 1 MSKFCEMCGKGKAHGGCITRKGLAKKAGGIGMHVVKNVKRTFEANLQNVRI--NEGGTVK 58 Query: 48 QLRISKCALRS 58 +++ +R+ Sbjct: 59 TVKMCVRCIRT 69 >gi|254526261|ref|ZP_05138313.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] gi|221537685|gb|EEE40138.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] Length = 51 Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 28 RFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 NL + L + ++ ++IS AL+S+++ G LD+F ++ Sbjct: 1 MQQVNLQKRRLWWEEGKKWVNIKISTKALKSIQKVG-LDKFAKSN 44 >gi|15807508|ref|NP_296244.1| 50S ribosomal protein L28 [Deinococcus radiodurans R1] gi|14195153|sp|Q9RRG8|RL28_DEIRA RecName: Full=50S ribosomal protein L28 gi|190613510|pdb|2ZJP|U Chain U, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613540|pdb|2ZJQ|U Chain U, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613571|pdb|2ZJR|U Chain U, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613678|pdb|3CF5|U Chain U, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282477|pdb|3DLL|U Chain U, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714561|pdb|3PIO|U Chain U, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714591|pdb|3PIP|U Chain U, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|6460348|gb|AAF12065.1|AE002082_1 ribosomal protein L28 [Deinococcus radiodurans R1] Length = 81 Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 15/74 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K + N V T+R NL + + Q Sbjct: 1 MSRECYLTGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIR--ENGQVK 58 Query: 48 QLRISKCALRSVER 61 + +S ALR++ + Sbjct: 59 TVWLSANALRTLSK 72 >gi|94984642|ref|YP_604006.1| 50S ribosomal protein L28 [Deinococcus geothermalis DSM 11300] gi|123079962|sp|Q1J0Z7|RL28_DEIGD RecName: Full=50S ribosomal protein L28 gi|94554923|gb|ABF44837.1| ribosomal protein L28 [Deinococcus geothermalis DSM 11300] Length = 84 Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 15/74 (20%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MS C LT K M N V T+R NL + + Sbjct: 1 MSHQCYLTGKKTMVVNAVIRRGKARREGGVGRKTTGITKRVQKANLHKKLIR--ENGVLK 58 Query: 48 QLRISKCALRSVER 61 ++ +S ALR++ + Sbjct: 59 RVWLSAAALRTLNK 72 >gi|78766370|ref|YP_392491.1| VP2 [Adult diarrheal rotavirus strain J19] gi|123851386|sp|Q45UF9|VP2_ROTJ1 RecName: Full=Inner capsid protein VP2 gi|69145408|gb|AAZ03486.1| VP2 [Adult diarrheal rotavirus strain J19] Length = 973 Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIME-------QKYQLRISKCA 55 R+CEL+ + +++ H+ + + N+ R +L +I + + + A Sbjct: 364 RMCELSG--PLYRSRIVHSMRMMSKLWRTNVFRTSLEDEITKIYAAAEVSMVSIDATTSA 421 Query: 56 LRSVE 60 L ++ Sbjct: 422 LSTIN 426 >gi|226732796|sp|A9Q1K8|VP2_ROTB2 RecName: Full=Inner capsid protein VP2 gi|149798907|gb|ABR32123.1| VP2 [Human rotavirus B219] Length = 973 Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 3 RVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIME-------QKYQLRISKCA 55 R+CEL+ + +++ H+ + + N+ R +L +I + + + A Sbjct: 364 RMCELSG--PLYRSRIIHSMRMMSKLWRTNVFRTSLEDEITKIYAAAEVSMISIDATTSA 421 Query: 56 LRSVE 60 L ++ Sbjct: 422 LSTIN 426 >gi|323332124|gb|EGA73535.1| Mrpl24p [Saccharomyces cerevisiae AWRI796] Length = 107 Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 9 KKTVMSGNKVSHANNKTRRRFLPNLCRIT 37 V GN +S + KTR+++LPN+ + Sbjct: 76 GSFVQFGNNISESKAKTRKKWLPNVVKKR 104 >gi|226355606|ref|YP_002785346.1| 50S ribosomal protein L28 [Deinococcus deserti VCD115] gi|226317596|gb|ACO45592.1| putative 50S ribosomal protein L28 [Deinococcus deserti VCD115] Length = 81 Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 15/70 (21%) Query: 1 MSRVCELTKKTVMSGNKVSHANNK-------------TRRRFLPNLCRITLISDIMEQKY 47 MSR C LT K + N V+ TRR NL + T+ Q Sbjct: 1 MSRECYLTGKKNLVVNSVTRRGKARAQGGVGRKTTGITRRTQKANLQKKTVR--ESGQLK 58 Query: 48 QLRISKCALR 57 + +S ALR Sbjct: 59 TVWLSAHALR 68 >gi|300781692|ref|ZP_07091546.1| 50S ribosomal protein L28 [Corynebacterium genitalium ATCC 33030] gi|300533399|gb|EFK54460.1| 50S ribosomal protein L28 [Corynebacterium genitalium ATCC 33030] Length = 46 Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 5/31 (16%), Positives = 12/31 (38%) Query: 33 LCRITLISDIMEQKYQLRISKCALRSVERQG 63 + + + L +S L+ ++R G Sbjct: 1 MQKRRFYLPSEGRTITLNVSTKGLKIIDRDG 31 >gi|195121218|ref|XP_002005117.1| GI19241 [Drosophila mojavensis] gi|193910185|gb|EDW09052.1| GI19241 [Drosophila mojavensis] Length = 151 Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 54 CAL-RSVERQGGLDRFLSNSKKENLSARMRTLRSQILKKMSEKSS 97 L RS R+ LD K + + R + LRS+IL K +EK + Sbjct: 92 RCLSRSARRKAVLDEMHLKVKPRDCAVRAQKLRSEILAKRAEKRA 136 >gi|313681010|ref|YP_004058749.1| LSU ribosomal protein l28p [Oceanithermus profundus DSM 14977] gi|313153725|gb|ADR37576.1| LSU ribosomal protein L28P [Oceanithermus profundus DSM 14977] Length = 100 Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 18/98 (18%) Query: 1 MSRVCELTKKTVMSGNKVSHA---------NNKT----RRRFLPNLCRITLISDIMEQKY 47 MSRVCE++ K K++ KT + PNL ++T+ + Sbjct: 1 MSRVCEISGKRPTVARKITQRGKAKRLGGVGRKTTGIHKHWQAPNLRKVTIRVG--GKPV 58 Query: 48 QLRISKCALRSVERQGGLDRFLSNSKKENLSARMRTLR 85 R+ A+ V + L K E LS + R Sbjct: 59 TFRV---AMSHVHKVYELAERAKGMKLEGLSEKQIKAR 93 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.318 0.178 0.578 Lambda K H 0.267 0.0544 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,393,450,789 Number of Sequences: 14124377 Number of extensions: 71643880 Number of successful extensions: 170455 Number of sequences better than 10.0: 1852 Number of HSP's better than 10.0 without gapping: 1806 Number of HSP's successfully gapped in prelim test: 46 Number of HSP's that attempted gapping in prelim test: 167731 Number of HSP's gapped (non-prelim): 1853 length of query: 97 length of database: 4,842,793,630 effective HSP length: 66 effective length of query: 31 effective length of database: 3,910,584,748 effective search space: 121228127188 effective search space used: 121228127188 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 77 (33.9 bits)