HHsearch results for GI: 254780585 and protein with PDBid: 1faf_A

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.25  E-value=1.3e-11  Score=95.54  Aligned_cols=55  Identities=20%  Similarity=0.250  Sum_probs=48.7

Q ss_pred             HHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             897699861777328--89999999999999965788997987999999999999999962
Q gi|254780585|r  130 MQFNAFEILGLLSDS--SPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKS  188 (191)
Q Consensus       130 ~~~~Al~~Lgl~~~~--~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~S  188 (191)
                      ...++|+||||++++  +..+||++|++|+++||||++ |+   +++|++|++||++|++.
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~Ik~aYr~l~~~~HPDk~-~d---~e~~~~i~~Ay~~L~d~   65 (79)
T 1faf_A            9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GS---HALMQELNSLWGTFKTE   65 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CC---HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CC---HHHHHHHHHHHHHHCCH
T ss_conf             89999999198988789999999999999998498768-87---99999999999997589