HHSEARCH alignment of GI: 254780585 and SCOP domain: d1nz6a_

Alignment

Probab=99.06  E-value=2.4e-11  Score=92.27  Aligned_cols=56  Identities=21%  Similarity=0.414  Sum_probs=49.8

Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHHCC
Q ss_conf             998617773288999999999999996578899798---79999999999999999628
Q gi|254780585|r  134 AFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDR---GSEERFQAVIQAYKILKKSG  189 (191)
Q Consensus       134 Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~---~~ee~~~~I~~Ay~~Lk~Sg  189 (191)
                      .|.+|||...+|.++||++|++|++.+|||+++++.   .+++.|+.|++||++|.+..
T Consensus        35 ~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~   93 (98)
T d1nz6a_          35 KWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG   93 (98)
T ss_dssp             SCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             88556877668999999999999998664448980889888999999999999978997

SCOP domain information

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]