HHsearch alignment for GI: 254780586 and conserved domain: COG0271

>COG0271 BolA Stress-induced morphogen (activity unknown) [Signal transduction mechanisms].
Probab=99.96  E-value=6.4e-30  Score=182.58  Aligned_cols=84  Identities=39%  Similarity=0.681  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             99999998419951799995065688877777899850899999820347998889999999999998337822877760
Q gi|254780586|r   10 NRITEKIRIALSPDDLQVINESHLHVGHQPQFNGLGETHIRIKIVSPTFTGISKTFRHRKIYDLLHKEIKEELHALSIEA   89 (101)
Q Consensus        10 ~~I~~kL~~~l~~~~i~V~D~S~~H~gH~~~~~~~~~sHf~i~IvS~~F~g~s~i~rHr~V~~~L~~e~~~~iHAlsik~   89 (101)
T Consensus         6 ~~Ie~~l~~~f~p~~l~i~deS~~h~~~~~----g~~~Hf~i~IVS~~F~G~s~v~rHr~V~~~L~del~~~iHALal~t   81 (90)
T COG0271           6 ERIEKKLRAAFPPSFLEIIDESHRHHGHAG----GGGSHFKVVIVSEAFQGKSLVARHRLVYSALKDELSGGIHALALHT   81 (90)
T ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCCCC----CCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             999999981189756999863445355789----9887089999765548852999999999999999835320047673


Q ss_pred             CCHHHHHH
Q ss_conf             76899998
Q gi|254780586|r   90 FSPDEKHT   97 (101)
Q Consensus        90 ~tp~E~~~   97 (101)
T Consensus        82 ~t~~e~~~   89 (90)
T COG0271          82 YTPEEWKG   89 (90)
T ss_pred             ECCCHHCC
T ss_conf             16611024