HHsearch alignment for GI: 254780586 and conserved domain: COG0271
>COG0271 BolA Stress-induced morphogen (activity unknown) [Signal transduction mechanisms].
Probab=99.96 E-value=6.4e-30 Score=182.58 Aligned_cols=84 Identities=39% Similarity=0.681 Sum_probs=80.4
Q ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 99999998419951799995065688877777899850899999820347998889999999999998337822877760
Q gi|254780586|r 10 NRITEKIRIALSPDDLQVINESHLHVGHQPQFNGLGETHIRIKIVSPTFTGISKTFRHRKIYDLLHKEIKEELHALSIEA 89 (101)
Q Consensus 10 ~~I~~kL~~~l~~~~i~V~D~S~~H~gH~~~~~~~~~sHf~i~IvS~~F~g~s~i~rHr~V~~~L~~e~~~~iHAlsik~ 89 (101)
T Consensus 6 ~~Ie~~l~~~f~p~~l~i~deS~~h~~~~~----g~~~Hf~i~IVS~~F~G~s~v~rHr~V~~~L~del~~~iHALal~t 81 (90)
T COG0271 6 ERIEKKLRAAFPPSFLEIIDESHRHHGHAG----GGGSHFKVVIVSEAFQGKSLVARHRLVYSALKDELSGGIHALALHT 81 (90)
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCC----CCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 999999981189756999863445355789----9887089999765548852999999999999999835320047673
Q ss_pred CCHHHHHH
Q ss_conf 76899998
Q gi|254780586|r 90 FSPDEKHT 97 (101)
Q Consensus 90 ~tp~E~~~ 97 (101)
T Consensus 82 ~t~~e~~~ 89 (90)
T COG0271 82 YTPEEWKG 89 (90)
T ss_pred ECCCHHCC
T ss_conf 16611024