HHsearch alignment for GI: 254780588 and conserved domain: COG0447

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism].
Probab=91.86  E-value=1.3  Score=25.41  Aligned_cols=105  Identities=18%  Similarity=0.313  Sum_probs=78.0

Q ss_pred             HCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHH-------HHHHHCCC--CHHHHHHHHHCC-CCHHHH
Q ss_conf             23799889999616777754211332000220467401215544-------22442156--012256554203-884899
Q gi|254780588|r  186 LKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEG-------AASILWRD--SSRAAQAAIAMK-IIATDL  255 (317)
Q Consensus       186 ~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg-------~AsILwkd--~~~a~eAAealk-lTa~DL  255 (317)
T Consensus       113 R~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~ea  192 (282)
T COG0447         113 RTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEA  192 (282)
T ss_pred             HHCCCCEEEEECCEEECCCCEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             74896559997037505862799985425500013113789983420586447899998642565654123310569999


Q ss_pred             HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             978996526228898444898999999999999999998589989999
Q gi|254780588|r  256 QDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIR  303 (317)
Q Consensus       256 ~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li  303 (317)
T Consensus       193 l~MGlVN~Vvp~-------------~~LE~e~v~W~~E~l~kSP~AlR  227 (282)
T COG0447         193 LDMGLVNTVVPH-------------ADLEKETVQWAREMLAKSPTALR  227 (282)
T ss_pred             HHCCCEEEECCH-------------HHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             856871231338-------------88889999999999853938999