HHsearch alignment for GI: 254780588 and conserved domain: COG0447
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism].
Probab=91.86 E-value=1.3 Score=25.41 Aligned_cols=105 Identities=18% Similarity=0.313 Sum_probs=78.0
Q ss_pred HCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHH-------HHHHHCCC--CHHHHHHHHHCC-CCHHHH
Q ss_conf 23799889999616777754211332000220467401215544-------22442156--012256554203-884899
Q gi|254780588|r 186 LKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEG-------AASILWRD--SSRAAQAAIAMK-IIATDL 255 (317)
Q Consensus 186 ~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg-------~AsILwkd--~~~a~eAAealk-lTa~DL 255 (317)
T Consensus 113 R~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~ea 192 (282)
T COG0447 113 RTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEA 192 (282)
T ss_pred HHCCCCEEEEECCEEECCCCEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 74896559997037505862799985425500013113789983420586447899998642565654123310569999
Q ss_pred HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 978996526228898444898999999999999999998589989999
Q gi|254780588|r 256 QDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIR 303 (317)
Q Consensus 256 ~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li 303 (317)
T Consensus 193 l~MGlVN~Vvp~-------------~~LE~e~v~W~~E~l~kSP~AlR 227 (282)
T COG0447 193 LDMGLVNTVVPH-------------ADLEKETVQWAREMLAKSPTALR 227 (282)
T ss_pred HHCCCEEEECCH-------------HHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 856871231338-------------88889999999999853938999