HHsearch alignment for GI: 254780588 and conserved domain: COG4799
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].
Probab=100.00 E-value=4.6e-35 Score=269.86 Aligned_cols=214 Identities=27% Similarity=0.409 Sum_probs=180.2
Q ss_pred HHHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHH
Q ss_conf 8763500223-79998622545--06722753347897299998875380089998458775023442026776836899
Q gi|254780588|r 62 QVSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYR 138 (317)
Q Consensus 62 ~~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~r 138 (317)
T Consensus 279 ivP~d~~~pYDvrevI~rl~D~~~F~E~~--~~~a--~~iV~GfaRi~G~pVGiIANq--------p~~~~G~l~~~sa~ 346 (526)
T COG4799 279 IVPDDPRKPYDVREVIARLVDDGEFLEFK--AGYA--KNIVTGFARIDGRPVGIIANQ--------PRHLGGVLDIDSAD 346 (526)
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCHHHHH--HHHC--CCEEEEEEEECCEEEEEEECC--------CCCCCCCCCHHHHH
T ss_conf 58888786641899998744772088887--6327--651899999899888999217--------52136620557789
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCE
Q ss_conf 999999999971994899995353246778430027999999988862379988999961677775421133----2000
Q gi|254780588|r 139 KAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFV 214 (317)
Q Consensus 139 Ka~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v 214 (317)
T Consensus 347 KaArFI~~cd~~~iPlv~L~d~pGFm~G~~~E~~giik~Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~ 426 (526)
T COG4799 347 KAARFIRLCDAFNIPLVFLVDTPGFMPGTDQEYGGIIKHGAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALGPDFN 426 (526)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCEE
T ss_conf 99999987401389769995689878881677574887304888778663688699996444564546655776787347
Q ss_pred EEECCCCEEEECHHHHHHHHCCCCHHHHHHHH-----HCC----------CCHHHHHHCCCCCEEECCCCCCCCCCHHHH
Q ss_conf 22046740121554422442156012256554-----203----------884899978996526228898444898999
Q gi|254780588|r 215 YMLEHAIYSVISPEGAASILWRDSSRAAQAAI-----AMK----------IIATDLQDLSIIDGIIPEPIGGAHRNPAQT 279 (317)
Q Consensus 215 ~m~~~s~ysvisPEg~AsILwkd~~~a~eAAe-----alk----------lTa~DL~~lGiID~II~EP~GGAHrd~~~~ 279 (317)
T Consensus 427 ~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~~eY~~~~~~p~~aa~r~~iD~vI~---------p~-- 495 (526)
T COG4799 427 YAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQLIAEYEEQFSNPYYAAERGYIDAVID---------PA-- 495 (526)
T ss_pred EECCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC---------HH--
T ss_conf 7657530440479888999999987512460567898888899999875044578987277884228---------79--
Q ss_pred HHHHHHHHHHHHHHHHCCCHH
Q ss_conf 999999999999998589989
Q gi|254780588|r 280 ISSVGEIISQFLSETSTYSET 300 (317)
Q Consensus 280 ~~~lk~~i~~~L~~L~~~~~~ 300 (317)
T Consensus 496 --~tR~~L~~~l~~~~~k~~~ 514 (526)
T COG4799 496 --DTRAVLGRALSALANKPVV 514 (526)
T ss_pred --HHHHHHHHHHHHHHCCCCC
T ss_conf --9999999999987518655