HHsearch alignment for GI: 254780588 and conserved domain: KOG0540
>KOG0540 consensus.
Probab=99.94 E-value=1.7e-25 Score=201.90 Aligned_cols=207 Identities=23% Similarity=0.314 Sum_probs=171.8
Q ss_pred HHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 0223-79998622545--06722753347897299998875380089998458775023442026776836899999999
Q gi|254780588|r 68 NRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLM 144 (317)
Q Consensus 68 ~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~ 144 (317)
T Consensus 310 ~~~yd~r~vi~~iVD~~~f~E~~--~~y~~--tlvtGfarlnG~tVgIvgnn--------~kf~~G~L~s~sa~KgarfI 377 (536)
T KOG0540 310 TKAYDVREVIARIVDGSRFFEFK--PGYGD--TLVTGFARLNGRTVGIVGNN--------PKFAGGVLFSESAVKGARFI 377 (536)
T ss_pred CCCCCHHHHHHHHCCCCHHHHHC--CCCCC--CEEEEEEEECCEEEEEECCC--------CHHCCCCCCHHHHHHHHHHH
T ss_conf 45630476777650440454422--24020--21660126778888996047--------20114411114444467899
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCEEEECCC
Q ss_conf 999971994899995353246778430027999999988862379988999961677775421133----2000220467
Q gi|254780588|r 145 EMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFVYMLEHA 220 (317)
Q Consensus 145 ~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v~m~~~s 220 (317)
T Consensus 378 e~c~q~~IPLi~l~ni~Gfm~g~~~e~~gIaK~gAklv~a~a~akvpkITiit~~s-yGG~y~m~sr~~~gd~~yawP~A 456 (536)
T KOG0540 378 ELCDQRNIPLIFLQNITGFMVGRAAEAGGIAKHGAKLVYAVACAKVPKITIITGGS-YGGNYAMCSRGYSGDINYAWPNA 456 (536)
T ss_pred HHHHHCCCCEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCCCCCCCCCCCCCEEEECCCC
T ss_conf 98872488679997357703362244414665304442454544675599992376-67742002666578605875632
Q ss_pred CEEEECHHHHHHHHCCCCH-HH----HHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4012155442244215601-22----565542038848999789965262288984448989999999999999999985
Q gi|254780588|r 221 IYSVISPEGAASILWRDSS-RA----AQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETS 295 (317)
Q Consensus 221 ~ysvisPEg~AsILwkd~~-~a----~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~ 295 (317)
T Consensus 457 ~IavmG~~~a~~Vi~q~~~e~a~~~~~~~~E~f-~npy~a~~Rg~~D~II~p-------------~~tR~vl~~~l~~~~ 522 (536)
T KOG0540 457 RIAVMGGKQAANVIFQITLEKAVALKAPYIEKF-GNPYYAAARGWDDGIIDP-------------SDTRKVLGLDLQAAA 522 (536)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHH-CCCCHHHHHHCCCCCCCH-------------HHHHHHHHHHHHHHH
T ss_conf 155314544010211102555443104688873-593187774202445584-------------676678888899986
Q ss_pred CCCHHH
Q ss_conf 899899
Q gi|254780588|r 296 TYSETE 301 (317)
Q Consensus 296 ~~~~~~ 301 (317)
T Consensus 523 ~~pl~~ 528 (536)
T KOG0540 523 NKPLQT 528 (536)
T ss_pred CCCCCC
T ss_conf 487754