HHsearch alignment for GI: 254780588 and conserved domain: KOG0540

Probab=99.73  E-value=2.8e-17  Score=143.61  Aligned_cols=175  Identities=24%  Similarity=0.344  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHHCCCC---EEEEC---CCCCCCCC----CEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHH
Q ss_conf             022379998622545---06722---75334789----729999887538008999845877502344202677683689
Q gi|254780588|r   68 NRPHYIDYINSLFTH---FISLA---GDRLFGDD----PAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGY  137 (317)
Q Consensus        68 ~Rp~~~dyi~~l~~d---f~el~---GDr~~~dD----~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~  137 (317)
T Consensus        62 gkl~arerIdlLld~gs~Fie~d~fa~h~m~~~e~~ps~sIvtg~g~i~gr~~~vianDfT--------v~ggs~y~i~~  133 (536)
T KOG0540          62 GKLLARERIDLLLDPGSPFIELDQFAGHEMYGKEKVPSGSIVTGRGRINGRKCFVIANDFT--------VKGGSYYPITV  133 (536)
T ss_pred             CCCCHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEECCCCH--------HCCCCCCHHHH
T ss_conf             3344044455200799962223565422201446788884485223205618999815740--------11663021228


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHH---HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCE
Q ss_conf             9999999999971994899995353246778430027---9999999888623799889999616777754211332000
Q gi|254780588|r  138 RKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQ---GEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFV  214 (317)
Q Consensus       138 rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~---~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v  214 (317)
T Consensus       134 kk~lr~~e~a~~~~~p~iyL~DSgga~l~~~~es~~d~~~~~~If~n~n~mss~~ipqis~Img~Ct~gg~y~pAm~d~~  213 (536)
T KOG0540         134 KKHLRAQEIADNNRLPCIYLVDSGGARLPRQAESFADSYHFGRIFYNQNVMSSGNIPQISVIMGSCTAGGAYVPAMADET  213 (536)
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHCCCHHHHHEEEEECCEECCCCCCCEEEEEECCCCCCEECCCCCCEE
T ss_conf             88866888886358986058458555573022314770121002220220225788733689702567744243336404


Q ss_pred             EEECCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCC
Q ss_conf             2204674012155442244215601225655420388489997899652622889844489
Q gi|254780588|r  215 YMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRN  275 (317)
Q Consensus       215 ~m~~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd  275 (317)
T Consensus       214 ~~vk~~s~-------------------------lfl~gp~lVka~tnEevsqedlgga~~h  249 (536)
T KOG0540         214 IMVKDTST-------------------------LFLAGPPLVKAATNEEVSQEDLGGADLH  249 (536)
T ss_pred             EEECCCCE-------------------------EEECCCCHHHHHCCCEEEHHHCCCCCEE
T ss_conf             89637511-------------------------8953881243304552205340786303