HHsearch alignment for GI: 254780588 and conserved domain: PRK03580

>PRK03580 carnitinyl-CoA dehydratase; Provisional.
Probab=97.98  E-value=0.00078  Score=48.25  Aligned_cols=138  Identities=12%  Similarity=0.165  Sum_probs=83.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCC-CC-CCCCC--------CCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             77683689999999999997-1994899995353-24-67784--------30027999999988862379988999961
Q gi|254780588|r  130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAG-AY-PGVDA--------EARGQGEAIARATEMCLKLQVPILSIIIG  198 (317)
Q Consensus       130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpG-a~-~g~~a--------E~~G~~~aia~~l~~~~~~~vP~i~vv~g  198 (317)
T Consensus        25 NAl~~~m~~~l~~al~~~~~d~~vrvvvltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaaV~G  104 (262)
T PRK03580         25 NAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNG  104 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             77999999999999999861999659999669996042671076653478643134266789999998199999999868


Q ss_pred             CCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHC-C--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf             67777542113320002204674012------15544224421-5--6012256-554203884899978996526228
Q gi|254780588|r  199 EGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILW-R--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE  267 (317)
Q Consensus       199 eg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILw-k--d~~~a~e-AAealklTa~DL~~lGiID~II~E  267 (317)
T Consensus       105 ~a~GgG~~LalacD~~ia~~~a~f~~pe~~lGl~p~~g~~~~l~r~iG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~  183 (262)
T PRK03580        105 YAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMDAEEALRWGLVNRVVSQ  183 (262)
T ss_pred             EEEEHHHHHHHHCCEEEECCCCCEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCH
T ss_conf             6661869998852702414787651577603678885499999999709999999871898759999887991054384