HHsearch alignment for GI: 254780588 and conserved domain: PRK12478

Probab=97.11  E-value=0.0062  Score=41.87  Aligned_cols=87  Identities=13%  Similarity=0.118  Sum_probs=57.9

Q ss_pred             HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEC----HHHHH-HHHCC-CCHHHHHH-HHHCCCCHH
Q ss_conf             9888623799889999616777754211332000220467401215----54422-44215-60122565-542038848
Q gi|254780588|r  181 ATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVIS----PEGAA-SILWR-DSSRAAQA-AIAMKIIAT  253 (317)
Q Consensus       181 ~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvis----PEg~A-sILwk-d~~~a~eA-AealklTa~  253 (317)
T Consensus       104 ~~~~i~~~~kPvIAaVnG~a~GgG~~Lal~cDi~iAs~~A~f~~p~~~lgg~~~~~~~~~rlg~~~a~~l~ltg~~i~A~  183 (298)
T PRK12478        104 KFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASEDAVIGTPYSRMWGAYLTGMWLYRLSLAKVKWHSLTGRPLTGV  183 (298)
T ss_pred             HHHHHHHCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf             99999818998899987987367789998679478538878866620127654147999976899999999719965499


Q ss_pred             HHHHCCCCCEEECC
Q ss_conf             99978996526228
Q gi|254780588|r  254 DLQDLSIIDGIIPE  267 (317)
Q Consensus       254 DL~~lGiID~II~E  267 (317)
T Consensus       184 eA~~~GLVn~VVp~  197 (298)
T PRK12478        184 QAAEAELINEAVPF  197 (298)
T ss_pred             HHHHCCCHHEECCH
T ss_conf             99985960445288