HHsearch alignment for GI: 254780588 and conserved domain: TIGR00513
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; InterPro: IPR001095 This entry contains the alpha subunit the acetyl coenzyme A carboxylase complex (). It catalyzes the first step in the synthesis of long-chain fatty acids which involves the carboxylation of acetyl-CoA to malonyl-CoA. The acetyl-CoA carboxylase complex () is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and two non-identical carboxyl transferase subunits (alpha and beta) in a 2:2 association . The reaction involves two steps: Biotin carrier protein + ATP + HCO_3^- -> Carboxybiotin carrier protein + ADP + P_i Carboxybiotin carrier protein + Acetyl-CoA -> Malonyl-CoA + Biotin carrier protein ; GO: 0003989 acetyl-CoA carboxylase activity, 0006633 fatty acid biosynthetic process, 0009317 acetyl-CoA carboxylase complex.
Probab=100.00 E-value=0 Score=1013.80 Aligned_cols=317 Identities=51% Similarity=0.892 Sum_probs=312.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 97531455789999999999997422366--6776999999999999999997426999998887635002237999862
Q gi|254780588|r 1 MRHYLDFEEPISDLEAKIHELKKLSREDI--NEDFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINS 78 (317)
Q Consensus 1 M~~yLdFEkpI~eLe~kI~eL~~~~~~~~--~~~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~ 78 (317)
T Consensus 7 ~~~~LDFE~Pi~ELe~kI~~l~~~~~~D~kl~~d~~~~~~~Le~r~~~l~~~If~NL~~~q~~qlARhP~RP~tLDYI~~ 86 (329)
T TIGR00513 7 VAVYLDFEKPIAELEAKIEELRALSEQDEKLDVDLSDEIERLEKRLEKLTKKIFSNLKPWQRLQLARHPDRPYTLDYIEL 86 (329)
T ss_pred CCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 10131024427899999999998630222136656999999999999988888634687789997308888976889999
Q ss_pred CCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 25450672275334789729999887538008999845877502344202677683689999999999997199489999
Q gi|254780588|r 79 LFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 79 l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lv 158 (317)
T Consensus 87 i~~df~E~~GDRay~DD~AiVGG~Arldg~PV~viGhqKGr~tKek~~RNFGMP~P~GYRKALrLm~~AerF~~PIi~fi 166 (329)
T TIGR00513 87 IFDDFFELHGDRAYADDKAIVGGVARLDGRPVVVIGHQKGRDTKEKLLRNFGMPAPEGYRKALRLMKMAERFNLPIITFI 166 (329)
T ss_pred HHCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 86122000367788978223432113378124886213575403421125798879604799999987776179858865
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCC
Q ss_conf 53532467784300279999999888623799889999616777754211332000220467401215544224421560
Q gi|254780588|r 159 DTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRDS 238 (317)
Q Consensus 159 DtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd~ 238 (317)
T Consensus 167 DT~GAYPGigAEerGQsEAIA~NL~Ema~L~VPvic~vIGEGGSGGALaiGVGDkv~MLeyS~YSViSPEGCAaiLWkda 246 (329)
T TIGR00513 167 DTPGAYPGIGAEERGQSEAIAKNLREMARLKVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYSVISPEGCAAILWKDA 246 (329)
T ss_pred CCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH
T ss_conf 38888756204450527899999899710998879998526861478999898899887620220008788998606796
Q ss_pred HHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 1225655420388489997899652622889844489899999999999999999858998999999999999724869
Q gi|254780588|r 239 SRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIREHRRQKYLNIGRNL 317 (317)
Q Consensus 239 ~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~~R~~Kf~~iG~~l 317 (317)
T Consensus 247 ~ka~~Aa~amkItA~dLkel~lID~iI~EP~GGAH~~~~~~A~~lk~~Ll~~L~tL~~ls~~el~~~RY~kl~~~G~~~ 325 (329)
T TIGR00513 247 SKAEKAAEAMKITAPDLKELGLIDSIIPEPKGGAHRDPLSAAAKLKEALLDDLATLDQLSEEELLQRRYEKLMSLGKFV 325 (329)
T ss_pred HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE
T ss_conf 2679999983789215664013431016888723578899999999999999888873085678754789887405120