HHsearch alignment for GI: 254780588 and conserved domain: TIGR03133
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=99.84 E-value=5.6e-19 Score=155.70 Aligned_cols=148 Identities=24% Similarity=0.277 Sum_probs=115.1
Q ss_pred HHHHHHHCCCC--EEEECC--CCC-----------CCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHH
Q ss_conf 79998622545--067227--533-----------478972999988753800899984587750234420267768368
Q gi|254780588|r 72 YIDYINSLFTH--FISLAG--DRL-----------FGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEG 136 (317)
Q Consensus 72 ~~dyi~~l~~d--f~el~G--Dr~-----------~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g 136 (317)
T Consensus 8 ARERI~~LlD~GSF~E~~~p~~~~~s~~l~~~~~~~~~~DGvVtG~G~I~Gr~v~v~a~D~t--------v~GGs~g~~~ 79 (274)
T TIGR03133 8 ARERARGLLDAGSFRELLGPFDRVISPHLPRQGIVPQFDDGVVVGRGTIDGKPVVVAAQEGR--------FQGGSVGEVH 79 (274)
T ss_pred HHHHHHHHCCCCCCEEEHHHHHHHCCCCCHHCCCCCCCCCEEEEEEEEECCEEEEEEEECCC--------CCCCCCCHHH
T ss_conf 99999984399986040234653107771212898888987999999999989999997785--------1265546999
Q ss_pred HHHHHHHHHHHHHCC-----CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC--CCCCCCCC
Q ss_conf 999999999999719-----94899995353246778430027999999988862379988999961677--77542113
Q gi|254780588|r 137 YRKAVRLMEMADRFK-----IPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGG--SGGAMGIA 209 (317)
Q Consensus 137 ~rKa~r~~~~A~~f~-----lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~--sGGA~a~~ 209 (317)
T Consensus 80 ~~Ki~r~~e~A~e~~~~~~~~PvI~l~dSGGaRl~e~~~gl~~~~ei~~~~~~~sg-~IPqIsvV~G~~~c~GG~a~~~~ 158 (274)
T TIGR03133 80 GAKIVGALRLAIEDNRKGQPTAVVLLLDTGGVRLQEANAGLIAIAEIMRAILDARA-AVPVIGVIGGRVGCFGGMGIAAG 158 (274)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCEEECCC
T ss_conf 99999999999980744578777999617887644332001238999999999669-99879999554556677077002
Q ss_pred CCCCEEEECCCCEEEECHH
Q ss_conf 3200022046740121554
Q gi|254780588|r 210 AANFVYMLEHAIYSVISPE 228 (317)
Q Consensus 210 ~~d~v~m~~~s~ysvisPE 228 (317)
T Consensus 159 l~D~iIm~~~~~ifl~GP~ 177 (274)
T TIGR03133 159 LCSYLIMTEEGRLGLSGPE 177 (274)
T ss_pred CCCEEEEECCCEEECCCCH
T ss_conf 3738999789579533806