>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.

Probab=99.69 E-value=4.9e-16 Score=134.83 Aligned_cols=181 Identities=22% Similarity=0.335 Sum_probs=152.0 Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH-HHHC Q ss_conf 799986225450672275334789729999887538008999845877502344202677683689999999999-9971 Q gi|254780588|r 72 YIDYINSLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEM-ADRF 150 (317) Q Consensus 72 ~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~-A~~f 150 (317) T Consensus 2 g~~~l~~Lf~~~~~v~~~------~~v~~g~a~l~g~~v~vIgvv~~a--------~vGl--~ea~~lA~~Vl~~i~~d~ 65 (238) T TIGR03134 2 GRDWLAALFPTGHEVAGD------PGVLVGSAELAGGKVTVIGVVPDA--------EVGL--DEALALAQAVLDVIEADP 65 (238) T ss_pred HHHHHHHHCCCCCCCCCC------CCEEEEEEEECCCEEEEEEECCCC--------CCCH--HHHHHHHHHHHHHHHHCC T ss_conf 667999976887622557------876887647789478999965875--------3329--999999999999998389 Q ss_pred CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECCCCCCCCCCCC-CCCCEEEECCCCEEEEC Q ss_conf 9948999953532467784300279999999888623799---8899996167777542113-32000220467401215 Q gi|254780588|r 151 KIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQV---PILSIIIGEGGSGGAMGIA-AANFVYMLEHAIYSVIS 226 (317) Q Consensus 151 ~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~v---P~i~vv~geg~sGGA~a~~-~~d~v~m~~~s~ysvis 226 (317) T Consensus 66 krPIv~lvD~~gq~~g~r~E~~Gi~~~~A~l~~~~~~Ar~~GHp~i~lv~g~a~sGafla~gl~a~~~~Alp~a~i~vM~ 145 (238) T TIGR03134 66 KRPIVVLVDTPSQAYGRREELLGINQALAHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMVHVMD 145 (238) T ss_pred CCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCHHCCCCCHHHHCC T ss_conf 99779998077754560478723999999999999999854998699996573448999866420611127874353278 Q ss_pred HHHHHHHHCCCCHHHHHHHHHCCCCHH---HHHHCCCCCEEECCC Q ss_conf 544224421560122565542038848---999789965262288 Q gi|254780588|r 227 PEGAASILWRDSSRAAQAAIAMKIIAT---DLQDLSIIDGIIPEP 268 (317) Q Consensus 227 PEg~AsILwkd~~~a~eAAealklTa~---DL~~lGiID~II~EP 268 (317) T Consensus 146 ~~a~ARVTk~~ve~Le~la~s~PvfApgv~ny~~lG~v~~l~~~~ 190 (238) T TIGR03134 146 LESMARVTKRSVEELEALAKSSPVFAPGIENFVKLGGVHALLDVA 190 (238) T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCC T ss_conf 577677760789999998436998677878999830389884664

HHsearch alignment for GI: 254780588 and conserved domain: TIGR03134