HHsearch alignment for GI: 254780588 and conserved domain: pfam06833
>pfam06833 MdcE Malonate decarboxylase gamma subunit (MdcE). This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase.
Probab=99.17 E-value=2.1e-10 Score=94.84 Aligned_cols=177 Identities=20% Similarity=0.248 Sum_probs=141.4
Q ss_pred HHHHCCCCEEEECCCCCCCCCCEEEEEEEEE-CCCEEEEEEECCCCCCHHHHHHCCCCCC-HHHHHHHHHHHHH-HHHCC
Q ss_conf 9862254506722753347897299998875-3800899984587750234420267768-3689999999999-99719
Q gi|254780588|r 75 YINSLFTHFISLAGDRLFGDDPAMQIGLARF-HGQPVAIIGQEKGSDTKSRIKHNFGSPR-PEGYRKAVRLMEM-ADRFK 151 (317)
Q Consensus 75 yi~~l~~df~el~GDr~~~dD~aii~G~a~i-~g~~v~vig~~kG~~~~~~~~~n~G~~~-p~g~rKa~r~~~~-A~~f~ 151 (317)
T Consensus 2 ll~~LFp~g---h~---i~~~~~v~~G~~~~~~~r~vaViG~~~-----------~~~vG~~ea~~LA~~Vld~i~~~~~ 64 (234)
T pfam06833 2 LLAALFPDG---HG---IPASGDVLDGEATTRDVGPVAVIGTAN-----------GGEVGVLEAIALAAAVLEAIEQRDK 64 (234)
T ss_pred HHHHHCCCC---CC---CCCCCCEEECCCCCCCCCEEEEEECCC-----------CCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 467668887---61---233485686332467885699983589-----------8744099999999999999971999
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECCCCCCCCCCCCC-CCCEEEECCCCEEEECH
Q ss_conf 948999953532467784300279999999888623799---88999961677775421133-20002204674012155
Q gi|254780588|r 152 IPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQV---PILSIIIGEGGSGGAMGIAA-ANFVYMLEHAIYSVISP 227 (317)
Q Consensus 152 lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~v---P~i~vv~geg~sGGA~a~~~-~d~v~m~~~s~ysvisP 227 (317)
T Consensus 65 rpIl~lvD~~~Q~~~rrdEllGi~~~lAhla~~~~~AR~~GHpvI~Lv~g~a~sGaFla~gl~a~~~~ALp~a~i~vM~~ 144 (234)
T pfam06833 65 RPILALVDTPSQALSRRDELLGINQALAHLAKAYDLARLAGHPVIGLLYGKAMSGAFLAHGLQANRLIALPGAMVHVMDL 144 (234)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHCCCCCHHHCCCH
T ss_conf 87799980776543348998409999999999999999759976998754401189999887635231179850311784
Q ss_pred HHHHHHHCCCCHHHHHHHHHCCCCHH---HHHHCCCCCEEECCC
Q ss_conf 44224421560122565542038848---999789965262288
Q gi|254780588|r 228 EGAASILWRDSSRAAQAAIAMKIIAT---DLQDLSIIDGIIPEP 268 (317)
Q Consensus 228 Eg~AsILwkd~~~a~eAAealklTa~---DL~~lGiID~II~EP 268 (317)
T Consensus 145 ~a~ARvTk~~ve~L~~la~s~pvfApgv~n~~~lG~v~~l~~~~ 188 (234)
T pfam06833 145 AAMARVTKRSVEALEALAASSPVFAPGVDNYASMGALWALWDVD 188 (234)
T ss_pred HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 77677740779999988634997677878999830189883663