HHsearch results for GI: 254780588 and protein with PDBid: 1on3_A

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.90  E-value=4.7e-21  Score=168.91  Aligned_cols=216  Identities=19%  Similarity=0.173  Sum_probs=164.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC-----CCCCCC------CCEE
Q ss_conf             769999999999999999974269999988876350022379998622545--067227-----533478------9729
Q gi|254780588|r   32 DFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG-----DRLFGD------DPAM   98 (317)
Q Consensus        32 ~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G-----Dr~~~d------D~ai   98 (317)
                      ....++++|+++.+..     .+...-++|+.-+..+|...++.|+.|+|+  |+|+..     +..++.      .-++
T Consensus        11 ~~~~~~~~l~~~~~~~-----~~~gg~~~v~r~~~~GkltaReRI~~LlD~gSF~E~g~~~~~~~~~~~~~~~~~~~dgv   85 (523)
T 1on3_A           11 TMEGRVEQLAEQRQVI-----EAGGGERRVEKQHSQGKQTARERLNNLLDPHSFDEVGAFRKHRTTLFGMDKAVVPADGV   85 (523)
T ss_dssp             SHHHHHHHHHHHHHHH-----HTTTCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEECTTCCCCCCTTTTTTCCCGGGGE
T ss_pred             HHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCCCCEE
T ss_conf             9999999999999999-----86589999999997399989999999639997557401227576521234564788749


Q ss_pred             EEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf             99988753800899984587750234420267768368999999999999719948999953532467784300279999
Q gi|254780588|r   99 QIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAI  178 (317)
Q Consensus        99 i~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~ai  178 (317)
                      |+|+|+|+|++|+|++++..        ..+|.+.+...+|..|++++|.+.++|+|.|+|+.|+....+.+.-.+...+
T Consensus        86 v~G~G~I~Gr~v~v~a~D~t--------v~gGs~g~~~~~K~~~~~~~A~~~~~P~V~l~dsgG~rl~e~~~~l~~~~~~  157 (523)
T 1on3_A           86 VTGRGTILGRPVHAASQDFT--------VMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARIQEGIDSLSGYGKM  157 (523)
T ss_dssp             EEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHH
T ss_pred             EEEEEEECCEEEEEEEECCC--------EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCHH
T ss_conf             99999999999999997586--------7363778888778988999998668988999806898665442203212599


Q ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHC
Q ss_conf             99988862379988999961677775421133200022046740121554422442156012256554203884899978
Q gi|254780588|r  179 ARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDL  258 (317)
Q Consensus       179 a~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~l  258 (317)
                      ..++..++.. ||+|++|+|.+.+|+|+.++++|.++|.++|...+-+|.--....-.+.+     ++.+.=....+...
T Consensus       158 ~~~~~~~sg~-vP~Isvv~G~~~gG~a~~~~~~d~vIm~~~a~l~l~GP~vV~~~~ge~v~-----~eelGGa~~h~~~s  231 (523)
T 1on3_A          158 FFANVKLSGV-VPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFITGPQVIKSVTGEDVT-----ADELGGAEAHMAIS  231 (523)
T ss_dssp             HHHHHHHTTT-SCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESSCHHHHHHHHCCCCC-----HHHHHSHHHHHHTT
T ss_pred             HHHHHHHCCC-CCEEEEEECCCCCCCEECCCCCCEEEEECCEEEEECCCHHHHHHCCCCCC-----HHHCCCHHHHHHHC
T ss_conf             9999985077-97799970788634020012383899815604884280877875078679-----68802587887612


Q ss_pred             CCCCEEEC
Q ss_conf             99652622
Q gi|254780588|r  259 SIIDGIIP  266 (317)
Q Consensus       259 GiID~II~  266 (317)
                      |++|.+.+
T Consensus       232 G~~d~v~~  239 (523)
T 1on3_A          232 GNIHFVAE  239 (523)
T ss_dssp             CCCSEEES
T ss_pred             CCCCEEEC
T ss_conf             76633413