HHsearch results for GI: 254780588 and protein with PDBid: 1pix_A
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=8.4e-38 Score=287.74 Aligned_cols=221 Identities=19% Similarity=0.238 Sum_probs=182.9
Q ss_pred HHHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCH------HHHHHCCCCC
Q ss_conf 8763500223-79998622545--0672275334789729999887538008999845877502------3442026776
Q gi|254780588|r 62 QVSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTK------SRIKHNFGSP 132 (317)
Q Consensus 62 ~~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~------~~~~~n~G~~ 132 (317)
.+.+.+.+|| +++.|..++|+ |+|+..+ |+ +++||||||++|+||+|||+|++.... .++.+++|.+
T Consensus 312 ~vp~d~~~~yd~r~vi~~i~D~~~f~E~~~~--~g--~~iVtG~aRl~G~pVGVIAn~~~~~~~~~~~~a~~~~~~gG~l 387 (587)
T 1pix_A 312 MVPLNDKRAYDIYNVIARLFDNSELHEYKKG--YG--PEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKL 387 (587)
T ss_dssp HSCSSTTSCCCHHHHHHTTSGGGBCEESSTT--SS--TTEEEEEEEETTEEEEEEEECCSEETTCCTTSCTTCCEETTEE
T ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHCCCCC--CC--CCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1444555676630000002332011013566--78--8537899986796799995255434455432223333568966
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC--
Q ss_conf 836899999999999971994899995353246778430027999999988862379988999961677775421133--
Q gi|254780588|r 133 RPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA-- 210 (317)
Q Consensus 133 ~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~-- 210 (317)
+|++++|+.|||++|++|+||||+|+|||||++|.++|+.|+..++|+++.++++++||+||||+|++++||+++++.
T Consensus 388 ~~~sa~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Giir~gA~l~~A~a~a~vP~itvi~rkayGga~~am~~~~ 467 (587)
T 1pix_A 388 YRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQ 467 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTHHHHTTCTT
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCC
T ss_conf 87899999999998764299668971588878876999988999999999888737999799997985316778734765
Q ss_pred --CCCEE--EECCCCEEEECHHHHHHHHCCCCHHH-HHHH-------HHC---------CCCHHHHHHCCCCCEEECCCC
Q ss_conf --20002--20467401215544224421560122-5655-------420---------388489997899652622889
Q gi|254780588|r 211 --ANFVY--MLEHAIYSVISPEGAASILWRDSSRA-AQAA-------IAM---------KIIATDLQDLSIIDGIIPEPI 269 (317)
Q Consensus 211 --~d~v~--m~~~s~ysvisPEg~AsILwkd~~~a-~eAA-------eal---------klTa~DL~~lGiID~II~EP~ 269 (317)
+|.++ .|+.+.++|++|||++.|+|++...+ ++++ +.+ ..++....+.|.||+||+ |
T Consensus 468 ~~~~~~~~~a~p~a~i~vm~~e~av~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~aa~~g~vD~iId-P- 545 (587)
T 1pix_A 468 GNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVD-M- 545 (587)
T ss_dssp CTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECC-T-
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC-H-
T ss_conf 68861377218876261579999999998887652214452445899999999999987369999997288681288-3-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 844489899999999999999999858998
Q gi|254780588|r 270 GGAHRNPAQTISSVGEIISQFLSETSTYSE 299 (317)
Q Consensus 270 GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~ 299 (317)
...|+.|...|+.+.+.+.
T Consensus 546 -----------~~TR~~l~~~l~~~~~~~~ 564 (587)
T 1pix_A 546 -----------NKIRGYVEAFTEAAYQNPE 564 (587)
T ss_dssp -----------TTHHHHHHHHHHHHTTSCS
T ss_pred -----------HHHHHHHHHHHHHHHHCCC
T ss_conf -----------9999999999999985866