HHsearch results for GI: 254780588 and protein with PDBid: 3bpp_A
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=98.69 E-value=1.8e-07 Score=72.57 Aligned_cols=128 Identities=14% Similarity=0.177 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE---CCCCCCC
Q ss_conf 6776836899999999999971994-89999535324677843002799999998886237998899996---1677775
Q gi|254780588|r 129 FGSPRPEGYRKAVRLMEMADRFKIP-VISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIII---GEGGSGG 204 (317)
Q Consensus 129 ~G~~~p~g~rKa~r~~~~A~~f~lP-iv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~---geg~sGG 204 (317)
.|+.+|..++...|.++.|+.-+.. ||-.|||||-.+ -++..|++. +..++.|++++|. |..+|||
T Consensus 16 ~G~I~~~~~~~i~~~l~~a~~~~~kaivL~IdSPGG~v-------~~~~~I~~~---i~~~~~~v~~~v~~~~~~AaS~g 85 (230)
T 3bpp_A 16 KGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRA-------DAMMNIVQR---IQQSKIPVIIYVYPPGASAASAG 85 (230)
T ss_dssp ESSBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCBCH-------HHHHHHHHH---HHTCSSCEEEEECSTTCEEETHH
T ss_pred EEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH-------HHHHHHHHH---HHHCCCCCCEEEEECCHHHHHHH
T ss_conf 76888699999999999997689986999985988189-------999999999---86046788579997344677778
Q ss_pred CCCCCCCCCEEEECCCCEEEECHHHHHHHHC-------------------------CCCHHHHH-HHHHCCCCHHHHHHC
Q ss_conf 4211332000220467401215544224421-------------------------56012256-554203884899978
Q gi|254780588|r 205 AMGIAAANFVYMLEHAIYSVISPEGAASILW-------------------------RDSSRAAQ-AAIAMKIIATDLQDL 258 (317)
Q Consensus 205 A~a~~~~d~v~m~~~s~ysvisPEg~AsILw-------------------------kd~~~a~e-AAealklTa~DL~~l 258 (317)
++....||+++|.++|....+.|=+...-.+ ++.+.+++ ..+..-+|+++.+++
T Consensus 86 ~~ia~a~d~i~~~p~s~iGs~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~v~~~~~~~~~eA~~~ 165 (230)
T 3bpp_A 86 TYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKY 165 (230)
T ss_dssp HHHHHTSSEEEECTTCEEECCCCEEECCSSSCCEECCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCCEECHHHHHHT
T ss_pred HHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHC
T ss_conf 99885089899789981756454235788502677788889999999999999939499999988766878649999981
Q ss_pred CCCCEEEC
Q ss_conf 99652622
Q gi|254780588|r 259 SIIDGIIP 266 (317)
Q Consensus 259 GiID~II~ 266 (317)
|++|.|..
T Consensus 166 GlvD~i~~ 173 (230)
T 3bpp_A 166 GVIEVVAR 173 (230)
T ss_dssp TSCSEECS
T ss_pred CCCCEECC
T ss_conf 97300238