HHsearch alignment for GI: 254780589 and conserved domain: COG1376

Probab=97.78  E-value=0.00012  Score=48.99  Aligned_cols=108  Identities=15%  Similarity=0.170  Sum_probs=63.6

Q ss_pred             EECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC---C----HHCCCCCCCCCEEEEEEECCC-CCCCCCCEEEECCCC
Q ss_conf             98378699998607889668999865213238988---7----010178747507999840125-875765214207998
Q gi|254780589|r   56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG---P----KIETGDEQAPEGFYYIGWNNL-NPNSKYFLSINIGFP  127 (239)
Q Consensus        56 v~K~e~~Lel~~~~~~g~~~l~ktY~Ic~~sg~lG---p----K~~eGD~kTPEG~Y~i~~~~~-np~S~y~ls~~i~YP  127 (239)
T Consensus        95 ~~~~~~~~~~~~~~~~----~~~~~~v~~g~~~~~~~~~~~vs~~~~~p~~Tp~g~~~~~~~~~~~~~~~~--~~~~~p~  168 (232)
T COG1376          95 VVDTGLRLLYLVDDSG----TAQRYPVGIGKEGLDWPGTAKVSRGKEGPTWTPTGEFIVREKKGGFYMPNS--GVPPGPN  168 (232)
T ss_pred             ECCCCCEEEEEECCCC----CEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCC
T ss_conf             5167635899835888----169998875872320253378756764797278855785034534443266--6688898


Q ss_pred             CHHH-HHCC---CCCCCEEECCCC--------CCCCCEEECHHHHHHHHHHHHH
Q ss_conf             9889-9729---998826871677--------8667187064669999999999
Q gi|254780589|r  128 NEFD-KAHN---RTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRD  169 (239)
Q Consensus       128 N~~D-r~~g---rtG~~I~IHG~~--------~S~GC~amtd~~i~EIy~~v~~  169 (239)
T Consensus       169 np~G~~y~~~~~~~~~~y~IHgt~~~~~iG~~~ShGCIRL~n~Da~~ly~~v~~  222 (232)
T COG1376         169 NPLGALYAVRSSPSDTGYGIHGTPEPASIGKAVSHGCIRLSNQDAKDLYNRVPV  222 (232)
T ss_pred             CCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf             975520357404788507886887767778625887671774889999835899