HHsearch alignment for GI: 254780589 and conserved domain: COG3034

>COG3034 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00  E-value=0  Score=509.73  Aligned_cols=235  Identities=41%  Similarity=0.682  Sum_probs=218.9

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEE
Q ss_conf             94046899999999860466533-22234446755456777775187757847999983786999986078896689998
Q gi|254780589|r    1 MTNRYNILLFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE   79 (239)
Q Consensus         1 M~~R~~~Llfal~i~L~gc~~~~-~~~~~~~~pl~~~~~~~~~~~~~~~~~pi~Irv~K~e~~Lel~~~~~~g~~~l~kt   79 (239)
T Consensus         1 ~~~~~~~~~~~~~~~~~~c~~~gl~~~~~~~~~~s~~l~~k~~~k~~~~~~~~lv~i~K~e~~Lel~-~~~~~~yk~~~s   79 (298)
T COG3034           1 MLFVLLKAALILAELLALCLSQGLLLVGKDKYFWSSELPVKNEAKGLYREKVVLVRIFKEERKLELY-EKDGNIYKLLRS   79 (298)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHH-HCCCCHHHHHHC
T ss_conf             9177899999999999999860211104664332088888654120245685699973256632021-147853123220


Q ss_pred             EEECCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHCCCCCCCEEECCCCCCCCCEEECHHH
Q ss_conf             65213238988701017874750799984012587576521420799898899729998826871677866718706466
Q gi|254780589|r   80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ  159 (239)
Q Consensus        80 Y~Ic~~sg~lGpK~~eGD~kTPEG~Y~i~~~~~np~S~y~ls~~i~YPN~~Dr~~grtG~~I~IHG~~~S~GC~amtd~~  159 (239)
T Consensus        80 y~i~~~sg~lGpK~~EGD~ktPEGfY~l~~~~~~pds~Y~~s~~i~YPN~yD~a~grtG~~ImIHG~~~s~g~y~~~~a~  159 (298)
T COG3034          80 YKICLWSGKLGPKQREGDLKTPEGFYRLTRKQLNPDSYYYLSINIGYPNAYDKALGRTGGGIMIHGACLSDGCYSMTDAQ  159 (298)
T ss_pred             CCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCHHHHHCCCCCCCEEEECCCCCCCCCCHHHHH
T ss_conf             43343148888622236778984478831123687551123675048986788628788825994265788855105666


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCC
Q ss_conf             999999999999750856111699555689889875425867378985356888999858973279727668944888
Q gi|254780589|r  160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ  237 (239)
Q Consensus       160 i~EIy~~v~~a~~~~gQ~~~~v~~~Pfrmt~~n~~~~~~~~~~~FW~~Lk~gyd~Fe~~~~~p~v~v~~~~Yvf~~~~  237 (239)
T Consensus       160 i~~i~~~~a~a~~~-~q~~~~~~~~~f~m~~~nm~~~~~~~~~~fw~~lk~gyd~fe~t~~~p~v~v~~~~yv~~~~~  236 (298)
T COG3034         160 IDEIYGCVAKALQG-GQESVQVVADPFRMTIENMVRHRLSPLFSFWKALKPGYDNFEVTFYPPTVSVCDGRYVFSFPT  236 (298)
T ss_pred             HHHHHHHHHHHCCC-CCEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCEEECCCEEEECCCC
T ss_conf             88898899997136-764689874461366789998751526589998344563001340599646437678844544